cucumisin-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Inhibitor_I9 | PF05922 | 33 - 112 | 2.9e-12 | Peptidase inhibitor I9 |
| Peptidase_S8 | PF00082 | 135 - 582 | 2.5e-41 | Subtilase family |
| fn3_6 | PF17766 | 638 - 735 | 1e-26 | Fibronectin type-III domain |
| Pro_isomerase | PF00160 | 772 - 929 | 9.8e-38 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1124 |
| Acc36I | ACCTGC | 1 cut(s) | 1124 |
| Acc65I | GGTACC | 1 cut(s) | 133 |
| AccB1I | GGYRCC | 3 cut(s) | 133, 392, 706 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 492, 1550, 1775 |
| AccI | GTMKAC | 2 cut(s) | 813, 1293 |
| AccII | CGCG | 2 cut(s) | 718, 1118 |
| AciI | CCGC | 8 cut(s) | 630, 783, 924, 1006, 1508, 1557, 1658, 2825 |
| AclWI | GGATC | 5 cut(s) | 1943, 1956, 2005, 2677, 2791 |
| AcoI | YGGCCR | 5 cut(s) | 440, 921, 1614, 2653, 2879 |
| AcsI | RAATTY | 6 cut(s) | 435, 1088, 1375, 1727, 1955, 2647 |
| AcyI | GRCGYC | 1 cut(s) | 393 |
| AdeI | CACNNNGTG | 1 cut(s) | 2311 |
| AfaI | GTAC | 3 cut(s) | 135, 731, 2762 |
| AgsI | TTSAA | 9 cut(s) | 11, 244, 401, 580, 862, 1028, 1380, 2605, 2771 |
| AhlI | ACTAGT | 1 cut(s) | 1874 |
| AjnI | CCWGG | 3 cut(s) | 1513, 1774, 1862 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2364, 2396 |
| Alw21I | GWGCWC | 4 cut(s) | 553, 653, 2410, 2832 |
| Alw26I | GTCTC | 5 cut(s) | 597, 600, 1107, 2152, 2369 |
| Alw44I | GTGCAC | 1 cut(s) | 2828 |
| AlwI | GGATC | 5 cut(s) | 1943, 1956, 2005, 2677, 2791 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 644, 1139, 1661 |
| Ama87I | CYCGRG | 1 cut(s) | 2087 |
| ApaI | GGGCCC | 1 cut(s) | 1469 |
| ApaLI | GTGCAC | 1 cut(s) | 2828 |
| ApeKI | GCWGC | 9 cut(s) | 74, 254, 641, 747, 989, 1262, 1532, 1622, 1661 |
| ApoI | RAATTY | 6 cut(s) | 435, 1088, 1375, 1727, 1955, 2647 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1712, 1744 |
| AseI | ATTAAT | 1 cut(s) | 1896 |
| Asp718I | GGTACC | 1 cut(s) | 133 |
| AspLEI | GCGC | 4 cut(s) | 395, 718, 947, 1120 |
| AspS9I | GGNCC | 8 cut(s) | 476, 938, 1220, 1245, 1310, 1465, 1466, 2123 |
| AsuC2I | CCSGG | 2 cut(s) | 1082, 1585 |
| AsuHPI | GGTGA | 3 cut(s) | 1009, 1634, 2708 |
| AvaI | CYCGRG | 1 cut(s) | 2087 |
| AvaII | GGWCC | 2 cut(s) | 476, 938 |
| BaeGI | GKGCMC | 3 cut(s) | 1449, 1469, 2832 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1825, 1858 |
| BalI | TGGCCA | 3 cut(s) | 442, 2655, 2881 |
| BamHI | GGATCC | 1 cut(s) | 1948 |
| BanI | GGYRCC | 3 cut(s) | 133, 392, 706 |
| BanII | GRGCYC | 3 cut(s) | 1469, 1768, 2195 |
| BbsI | GAAGAC | 2 cut(s) | 307, 1963 |
| Bbv12I | GWGCWC | 4 cut(s) | 553, 653, 2410, 2832 |
| BbvI | GCAGC | 9 cut(s) | 61, 241, 653, 759, 976, 1274, 1544, 1609, 1648 |
| BceAI | ACGGC | 1 cut(s) | 1629 |
| BciT130I | CCWGG | 3 cut(s) | 1515, 1776, 1864 |
| BciVI | GTATCC | 2 cut(s) | 1562, 1826 |
| BclI | TGATCA | 3 cut(s) | 657, 1191, 2871 |
| BcnI | CCSGG | 2 cut(s) | 1082, 1585 |
| BcoDI | GTCTC | 5 cut(s) | 597, 600, 1107, 2152, 2369 |
| BcuI | ACTAGT | 1 cut(s) | 1874 |
| BfaI | CTAG | 7 cut(s) | 779, 1155, 1713, 1761, 1875, 2144, 2700 |
| BfoI | RGCGCY | 1 cut(s) | 396 |
| BfuAI | ACCTGC | 1 cut(s) | 1124 |
| BfuI | GTATCC | 2 cut(s) | 1562, 1826 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 92 |
| BglII | AGATCT | 1 cut(s) | 211 |
| Bme1390I | CCNGG | 5 cut(s) | 1082, 1515, 1585, 1776, 1864 |
| Bme18I | GGWCC | 2 cut(s) | 476, 938 |
| BmeT110I | CYCGRG | 1 cut(s) | 2087 |
| BmgT120I | GGNCC | 8 cut(s) | 476, 938, 1220, 1245, 1310, 1465, 1466, 2123 |
| BmrFI | CCNGG | 5 cut(s) | 1082, 1515, 1585, 1776, 1864 |
| BmsI | GCATC | 9 cut(s) | 73, 454, 641, 757, 784, 1162, 1337, 2162, 2779 |
| BpiI | GAAGAC | 2 cut(s) | 307, 1963 |
| BpmI | CTGGAG | 1 cut(s) | 1497 |
| Bpu10I | CCTNAGC | 1 cut(s) | 78 |
| BpuEI | CTTGAG | 1 cut(s) | 1478 |
| BpuMI | CCSGG | 2 cut(s) | 1082, 1585 |
| Bsa29I | ATCGAT | 3 cut(s) | 2212, 2331, 2570 |
| BsaAI | YACGTR | 1 cut(s) | 1444 |
| BsaHI | GRCGYC | 1 cut(s) | 393 |
| BsaI | GGTCTC | 1 cut(s) | 2369 |
| BsaJI | CCNNGG | 6 cut(s) | 918, 971, 1020, 1081, 1774, 1863 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1433, 1463, 2017, 2047 |
| Bse1I | ACTGG | 1 cut(s) | 1285 |
| Bse3DI | GCAATG | 4 cut(s) | 264, 520, 798, 2227 |
| BseBI | CCWGG | 3 cut(s) | 1515, 1776, 1864 |
| BseCI | ATCGAT | 3 cut(s) | 2212, 2331, 2570 |
| BseDI | CCNNGG | 6 cut(s) | 918, 971, 1020, 1081, 1774, 1863 |
| BseGI | GGATG | 7 cut(s) | 88, 304, 412, 1234, 2173, 2716, 2794 |
| BseMI | GCAATG | 4 cut(s) | 264, 520, 798, 2227 |
| BseMII | CTCAG | 1 cut(s) | 92 |
| BseNI | ACTGG | 1 cut(s) | 1285 |
| BseRI | GAGGAG | 2 cut(s) | 346, 714 |
| BseSI | GKGCMC | 3 cut(s) | 1449, 1469, 2832 |
| BseXI | GCAGC | 9 cut(s) | 61, 241, 653, 759, 976, 1274, 1544, 1609, 1648 |
| BseYI | CCCAGC | 3 cut(s) | 644, 1235, 2513 |
| BsgI | GTGCAG | 2 cut(s) | 1281, 2462 |
| Bsh1236I | CGCG | 2 cut(s) | 718, 1118 |
| BshNI | GGYRCC | 3 cut(s) | 133, 392, 706 |
| BshVI | ATCGAT | 3 cut(s) | 2212, 2331, 2570 |
| BsiHKAI | GWGCWC | 4 cut(s) | 553, 653, 2410, 2832 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2087 |
| BsiSI | CCGG | 4 cut(s) | 1081, 1266, 1566, 1584 |
| BslFI | GGGAC | 5 cut(s) | 462, 1068, 1600, 1880, 2055 |
| BsmAI | GTCTC | 5 cut(s) | 597, 600, 1107, 2152, 2369 |
| BsmBI | CGTCTC | 1 cut(s) | 1107 |
| BsmFI | GGGAC | 5 cut(s) | 462, 1068, 1600, 1880, 2055 |
| BsmI | GAATGC | 1 cut(s) | 1708 |
| Bso31I | GGTCTC | 1 cut(s) | 2369 |
| BsoBI | CYCGRG | 1 cut(s) | 2087 |
| Bsp120I | GGGCCC | 1 cut(s) | 1465 |
| Bsp1286I | GDGCHC | 8 cut(s) | 553, 653, 1449, 1469, 1768, 2195, 2410, 2832 |
| Bsp1407I | TGTACA | 2 cut(s) | 729, 2760 |
| Bsp19I | CCATGG | 2 cut(s) | 918, 971 |
| BspACI | CCGC | 8 cut(s) | 630, 783, 924, 1006, 1508, 1557, 1658, 2825 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspDI | ATCGAT | 3 cut(s) | 2212, 2331, 2570 |
| BspFNI | CGCG | 2 cut(s) | 718, 1118 |
| BspMI | ACCTGC | 1 cut(s) | 1124 |
| BspPI | GGATC | 5 cut(s) | 1943, 1956, 2005, 2677, 2791 |
| BspQI | GCTCTTC | 1 cut(s) | 12 |
| BspT107I | GGYRCC | 3 cut(s) | 133, 392, 706 |
| BspTNI | GGTCTC | 1 cut(s) | 2369 |
| BsrDI | GCAATG | 4 cut(s) | 264, 520, 798, 2227 |
| BsrGI | TGTACA | 2 cut(s) | 729, 2760 |
| BsrI | ACTGG | 1 cut(s) | 1285 |
| BssECI | CCNNGG | 6 cut(s) | 918, 971, 1020, 1081, 1774, 1863 |
| BssNI | GRCGYC | 1 cut(s) | 393 |
| BssT1I | CCWWGG | 3 cut(s) | 918, 971, 1020 |
| Bst2UI | CCWGG | 3 cut(s) | 1515, 1776, 1864 |
| Bst6I | CTCTTC | 3 cut(s) | 12, 1410, 2551 |
| BstACI | GRCGYC | 1 cut(s) | 393 |
| BstAUI | TGTACA | 2 cut(s) | 729, 2760 |
| BstBAI | YACGTR | 1 cut(s) | 1444 |
| BstC8I | GCNNGC | 6 cut(s) | 119, 667, 1326, 1600, 1744, 1854 |
| BstDEI | CTNAG | 3 cut(s) | 78, 1177, 2798 |
| BstDSI | CCRYGG | 2 cut(s) | 918, 971 |
| BstEII | GGTNACC | 1 cut(s) | 2714 |
| BstF5I | GGATG | 7 cut(s) | 88, 304, 412, 1234, 2173, 2716, 2794 |
| BstFNI | CGCG | 2 cut(s) | 718, 1118 |
| BstH2I | RGCGCY | 1 cut(s) | 396 |
| BstHHI | GCGC | 4 cut(s) | 395, 718, 947, 1120 |
| BstMAI | GTCTC | 5 cut(s) | 597, 600, 1107, 2152, 2369 |
| BstNI | CCWGG | 3 cut(s) | 1515, 1776, 1864 |
| BstNSI | RCATGY | 2 cut(s) | 741, 1602 |
| BstPI | GGTNACC | 1 cut(s) | 2714 |
| BstSCI | CCNGG | 5 cut(s) | 1080, 1513, 1583, 1774, 1862 |
| BstSLI | GKGCMC | 3 cut(s) | 1449, 1469, 2832 |
| BstUI | CGCG | 2 cut(s) | 718, 1118 |
| BstV1I | GCAGC | 9 cut(s) | 61, 241, 653, 759, 976, 1274, 1544, 1609, 1648 |
| BstV2I | GAAGAC | 2 cut(s) | 307, 1963 |
| BstX2I | RGATCY | 2 cut(s) | 211, 1948 |
| BstYI | RGATCY | 2 cut(s) | 211, 1948 |
| Bsu15I | ATCGAT | 3 cut(s) | 2212, 2331, 2570 |
| BsuI | GTATCC | 2 cut(s) | 1562, 1826 |
| BsuTUI | ATCGAT | 3 cut(s) | 2212, 2331, 2570 |
| BtgI | CCRYGG | 2 cut(s) | 918, 971 |
| BtgZI | GCGATG | 1 cut(s) | 2565 |
| BtsCI | GGATG | 7 cut(s) | 88, 304, 412, 1234, 2173, 2716, 2794 |
| BtsI | GCAGTG | 1 cut(s) | 757 |
| BtsIMutI | CAGTG | 5 cut(s) | 436, 660, 757, 1843, 2416 |
| BveI | ACCTGC | 1 cut(s) | 1124 |
| Cac8I | GCNNGC | 6 cut(s) | 119, 667, 1326, 1600, 1744, 1854 |
| CaiI | CAGNNNCTG | 3 cut(s) | 644, 1139, 1661 |
| CfoI | GCGC | 4 cut(s) | 395, 718, 947, 1120 |
| Cfr13I | GGNCC | 8 cut(s) | 476, 938, 1220, 1245, 1310, 1465, 1466, 2123 |
| ClaI | ATCGAT | 3 cut(s) | 2212, 2331, 2570 |
| CseI | GACGC | 3 cut(s) | 325, 1124, 1730 |
| Csp6I | GTAC | 3 cut(s) | 134, 730, 2761 |
| CviQI | GTAC | 3 cut(s) | 134, 730, 2761 |
| DdeI | CTNAG | 3 cut(s) | 78, 1177, 2798 |
| DinI | GGCGCC | 1 cut(s) | 394 |
| DraIII | CACNNNGTG | 1 cut(s) | 2311 |
| EaeI | YGGCCR | 5 cut(s) | 440, 921, 1614, 2653, 2879 |
| Eam1104I | CTCTTC | 3 cut(s) | 12, 1410, 2551 |
| EarI | CTCTTC | 3 cut(s) | 12, 1410, 2551 |
| Eco130I | CCWWGG | 3 cut(s) | 918, 971, 1020 |
| Eco24I | GRGCYC | 3 cut(s) | 1469, 1768, 2195 |
| Eco31I | GGTCTC | 1 cut(s) | 2369 |
| Eco32I | GATATC | 1 cut(s) | 2323 |
| Eco47I | GGWCC | 2 cut(s) | 476, 938 |
| Eco88I | CYCGRG | 1 cut(s) | 2087 |
| Eco91I | GGTNACC | 1 cut(s) | 2714 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1465 |
| EcoO65I | GGTNACC | 1 cut(s) | 2714 |
| EcoRII | CCWGG | 3 cut(s) | 1513, 1774, 1862 |
| EcoRV | GATATC | 1 cut(s) | 2323 |
| EcoT14I | CCWWGG | 3 cut(s) | 918, 971, 1020 |
| EcoT38I | GRGCYC | 3 cut(s) | 1469, 1768, 2195 |
| EgeI | GGCGCC | 1 cut(s) | 394 |
| EheI | GGCGCC | 1 cut(s) | 394 |
| ErhI | CCWWGG | 3 cut(s) | 918, 971, 1020 |
| Esp3I | CGTCTC | 1 cut(s) | 1107 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 201, 233, 653, 685 |
| FaqI | GGGAC | 5 cut(s) | 462, 1068, 1600, 1880, 2055 |
| FbaI | TGATCA | 3 cut(s) | 657, 1191, 2871 |
| FblI | GTMKAC | 2 cut(s) | 813, 1293 |
| FokI | GGATG | 7 cut(s) | 95, 311, 419, 1241, 2180, 2723, 2801 |
| FriOI | GRGCYC | 3 cut(s) | 1469, 1768, 2195 |
| FspBI | CTAG | 7 cut(s) | 779, 1155, 1713, 1761, 1875, 2144, 2700 |
| GlaI | GCGC | 4 cut(s) | 394, 717, 946, 1119 |
| GsaI | CCCAGC | 3 cut(s) | 648, 1239, 2517 |
| GsuI | CTGGAG | 1 cut(s) | 1497 |
| HaeII | RGCGCY | 1 cut(s) | 396 |
| HapII | CCGG | 4 cut(s) | 1081, 1266, 1566, 1584 |
| HgaI | GACGC | 3 cut(s) | 325, 1124, 1730 |
| HhaI | GCGC | 4 cut(s) | 395, 718, 947, 1120 |
| Hin1I | GRCGYC | 1 cut(s) | 393 |
| Hin6I | GCGC | 4 cut(s) | 393, 716, 945, 1118 |
| HinP1I | GCGC | 4 cut(s) | 393, 716, 945, 1118 |
| HincII | GTYRAC | 2 cut(s) | 181, 1294 |
| HindII | GTYRAC | 2 cut(s) | 181, 1294 |
| HinfI | GANTC | 8 cut(s) | 446, 593, 605, 866, 2043, 2059, 2524, 2567 |
| HpaII | CCGG | 4 cut(s) | 1081, 1266, 1566, 1584 |
| HphI | GGTGA | 3 cut(s) | 1009, 1634, 2708 |
| Hpy166II | GTNNAC | 9 cut(s) | 181, 730, 814, 1294, 1826, 1844, 2079, 2761, 2830 |
| Hpy188III | TCNNGA | 6 cut(s) | 80, 374, 687, 1793, 2188, 2745 |
| Hpy8I | GTNNAC | 9 cut(s) | 181, 730, 814, 1294, 1826, 1844, 2079, 2761, 2830 |
| Hpy99I | CGWCG | 3 cut(s) | 836, 1298, 1340 |
| HpyAV | CCTTC | 6 cut(s) | 32, 929, 1767, 1935, 2422, 2443 |
| HpyCH4IV | ACGT | 4 cut(s) | 174, 1443, 1629, 2754 |
| HpyF3I | CTNAG | 3 cut(s) | 78, 1177, 2798 |
| HpySE526I | ACGT | 4 cut(s) | 174, 1443, 1629, 2754 |
| Hsp92I | GRCGYC | 1 cut(s) | 393 |
| HspAI | GCGC | 4 cut(s) | 393, 716, 945, 1118 |
| KasI | GGCGCC | 1 cut(s) | 392 |
| KpnI | GGTACC | 1 cut(s) | 137 |
| Ksp22I | TGATCA | 3 cut(s) | 657, 1191, 2871 |
| LguI | GCTCTTC | 1 cut(s) | 12 |
| LmnI | GCTCC | 9 cut(s) | 333, 548, 648, 1441, 1516, 1739, 1771, 2038, 2190 |
| Lsp1109I | GCAGC | 9 cut(s) | 61, 241, 653, 759, 976, 1274, 1544, 1609, 1648 |
| LweI | GCATC | 9 cut(s) | 73, 454, 641, 757, 784, 1162, 1337, 2162, 2779 |
| MaeI | CTAG | 7 cut(s) | 779, 1155, 1713, 1761, 1875, 2144, 2700 |
| MaeII | ACGT | 4 cut(s) | 174, 1443, 1629, 2754 |
| MfeI | CAATTG | 2 cut(s) | 876, 1028 |
| MflI | RGATCY | 2 cut(s) | 211, 1948 |
| MhlI | GDGCHC | 8 cut(s) | 553, 653, 1449, 1469, 1768, 2195, 2410, 2832 |
| MlsI | TGGCCA | 3 cut(s) | 442, 2655, 2881 |
| MluNI | TGGCCA | 3 cut(s) | 442, 2655, 2881 |
| Mly113I | GGCGCC | 1 cut(s) | 393 |
| MlyI | GAGTC | 4 cut(s) | 455, 599, 602, 2037 |
| MmeI | TCCRAC | 4 cut(s) | 429, 1323, 1975, 2688 |
| Mox20I | TGGCCA | 3 cut(s) | 442, 2655, 2881 |
| MscI | TGGCCA | 3 cut(s) | 442, 2655, 2881 |
| MseI | TTAA | 5 cut(s) | 384, 672, 1100, 1896, 2423 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2357, 2887 |
| Msp20I | TGGCCA | 3 cut(s) | 442, 2655, 2881 |
| MspA1I | CMGCKG | 6 cut(s) | 74, 644, 926, 1622, 1658, 2825 |
| MspI | CCGG | 4 cut(s) | 1081, 1266, 1566, 1584 |
| MspR9I | CCNGG | 5 cut(s) | 1082, 1515, 1585, 1776, 1864 |
| MunI | CAATTG | 2 cut(s) | 876, 1028 |
| Mva1269I | GAATGC | 1 cut(s) | 1708 |
| MvaI | CCWGG | 3 cut(s) | 1515, 1776, 1864 |
| MvnI | CGCG | 2 cut(s) | 718, 1118 |
| NarI | GGCGCC | 1 cut(s) | 393 |
| NciI | CCSGG | 2 cut(s) | 1082, 1585 |
| NcoI | CCATGG | 2 cut(s) | 918, 971 |
| NmuCI | GTSAC | 7 cut(s) | 761, 955, 1984, 2110, 2299, 2714, 2840 |
| NspI | RCATGY | 2 cut(s) | 741, 1602 |
| PaeI | GCATGC | 1 cut(s) | 1602 |
| PaqCI | CACCTGC | 1 cut(s) | 1124 |
| PciSI | GCTCTTC | 1 cut(s) | 12 |
| PctI | GAATGC | 1 cut(s) | 1708 |
| PfeI | GAWTC | 4 cut(s) | 866, 2059, 2524, 2567 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 492, 1550, 1775 |
| PfoI | TCCNGGA | 1 cut(s) | 1513 |
| PleI | GAGTC | 4 cut(s) | 454, 599, 601, 2037 |
| PluTI | GGCGCC | 1 cut(s) | 396 |
| PpsI | GAGTC | 4 cut(s) | 454, 599, 601, 2037 |
| Ppu21I | YACGTR | 1 cut(s) | 1444 |
| PshBI | ATTAAT | 1 cut(s) | 1896 |
| Psp6I | CCWGG | 3 cut(s) | 1513, 1774, 1862 |
| PspEI | GGTNACC | 1 cut(s) | 2714 |
| PspFI | CCCAGC | 3 cut(s) | 644, 1235, 2513 |
| PspGI | CCWGG | 3 cut(s) | 1513, 1774, 1862 |
| PspOMI | GGGCCC | 1 cut(s) | 1465 |
| PspPI | GGNCC | 8 cut(s) | 476, 938, 1220, 1245, 1310, 1465, 1466, 2123 |
| PstNI | CAGNNNCTG | 3 cut(s) | 644, 1139, 1661 |
| PsuI | RGATCY | 2 cut(s) | 211, 1948 |
| PvuII | CAGCTG | 3 cut(s) | 74, 644, 1622 |
| RsaI | GTAC | 3 cut(s) | 135, 731, 2762 |
| RsaNI | GTAC | 3 cut(s) | 134, 730, 2761 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2357, 2887 |
| SalI | GTCGAC | 1 cut(s) | 1292 |
| SapI | GCTCTTC | 1 cut(s) | 12 |
| SaqAI | TTAA | 5 cut(s) | 384, 672, 1100, 1896, 2423 |
| Sau96I | GGNCC | 8 cut(s) | 476, 938, 1220, 1245, 1310, 1465, 1466, 2123 |
| SchI | GAGTC | 4 cut(s) | 455, 599, 602, 2037 |
| ScrFI | CCNGG | 5 cut(s) | 1082, 1515, 1585, 1776, 1864 |
| SduI | GDGCHC | 8 cut(s) | 553, 653, 1449, 1469, 1768, 2195, 2410, 2832 |
| SfaNI | GCATC | 9 cut(s) | 73, 454, 641, 757, 784, 1162, 1337, 2162, 2779 |
| SfoI | GGCGCC | 1 cut(s) | 394 |
| SinI | GGWCC | 2 cut(s) | 476, 938 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2357, 2887 |
| SmlI | CTYRAG | 1 cut(s) | 1493 |
| SmoI | CTYRAG | 1 cut(s) | 1493 |
| SpeI | ACTAGT | 1 cut(s) | 1874 |
| SphI | GCATGC | 1 cut(s) | 1602 |
| SsiI | CCGC | 8 cut(s) | 630, 783, 924, 1006, 1508, 1557, 1658, 2825 |
| SspDI | GGCGCC | 1 cut(s) | 392 |
| SspI | AATATT | 2 cut(s) | 557, 844 |
| SspMI | CTAG | 7 cut(s) | 779, 1155, 1713, 1761, 1875, 2144, 2700 |
| StyD4I | CCNGG | 5 cut(s) | 1080, 1513, 1583, 1774, 1862 |
| StyI | CCWWGG | 3 cut(s) | 918, 971, 1020 |
| TaiI | ACGT | 4 cut(s) | 177, 1446, 1632, 2757 |
| TaqI | TCGA | 9 cut(s) | 57, 1293, 1460, 2212, 2319, 2325, 2331, 2404, 2570 |
| TatI | WGTACW | 2 cut(s) | 729, 2760 |
| TauI | GCSGC | 4 cut(s) | 785, 926, 1511, 1661 |
| TfiI | GAWTC | 4 cut(s) | 866, 2059, 2524, 2567 |
| Tru1I | TTAA | 5 cut(s) | 384, 672, 1100, 1896, 2423 |
| Tru9I | TTAA | 5 cut(s) | 384, 672, 1100, 1896, 2423 |
| TscAI | CASTG | 5 cut(s) | 436, 660, 757, 1843, 2423 |
| TseFI | GTSAC | 7 cut(s) | 761, 955, 1984, 2110, 2299, 2714, 2840 |
| TseI | GCWGC | 9 cut(s) | 74, 254, 641, 747, 989, 1262, 1532, 1622, 1661 |
| Tsp45I | GTSAC | 7 cut(s) | 761, 955, 1984, 2110, 2299, 2714, 2840 |
| TspGWI | ACGGA | 2 cut(s) | 820, 1752 |
| TspRI | CASTG | 5 cut(s) | 436, 660, 757, 1843, 2423 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 492, 1550, 1775 |
| VneI | GTGCAC | 1 cut(s) | 2828 |
| VpaK11BI | GGWCC | 2 cut(s) | 476, 938 |
| VspI | ATTAAT | 1 cut(s) | 1896 |
| XapI | RAATTY | 6 cut(s) | 435, 1088, 1375, 1727, 1955, 2647 |
| XceI | RCATGY | 2 cut(s) | 741, 1602 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1027, 2663, 2726 |
| XmiI | GTMKAC | 2 cut(s) | 813, 1293 |
| XspI | CTAG | 7 cut(s) | 779, 1155, 1713, 1761, 1875, 2144, 2700 |