MD07G1206400.v1.1

cucumisin-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
28457223 .. 28465104
7882 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1206400.v1.1.491

Sequence Viewer

Length: 1725 bp
ATGGCTTTAACCCCATGGTTTCTCCTTCTCATCAGCCTCATATCTACTCTGCCAGTTGATGTCACTCTATCTGCTGCTCACCAGGATACCCGGAAGGATTATATTGTGTATATGGGTGACAAGCCAAAGCCAGAGGTTTCCACCACTACCACATCAGCTCTTCATGTAAACATGCTACAAAACGTCATCGATGACAGCAATATTGCGCACGAATCTCTGCTTCTGCACAGCTACAAGAGAACCTTCAATGGCTTTGCTGCCAAGCTAACAGAGGAAGAAGCACAGAAGTTGGCTGGAATGGATGGTGTGGTGTCAGTTTTCCCTAGTGAAACTAAGAAGCTCCAAACAACAAGGTCATGGGACTTCATTGGGTTTCCTGAAATGGTGAAGAGAAGCGCCATTGAAACTGATATCATTGTCGGGGTAATTGACACTGGAATTTGGCCTGAATCTGCCAGCTTCAGTGACGCCGGGTTTGGTCCACCCCCCAAAAGGTGGAAAGGCGCATGCAAGGGCGAAGGCAATTTTACTTGCAATAATAAAATTATCGGAGCACGGTATTACCGCAGTCAACCCTCCCCCCAAAATAGCAGTGATGTCATGTCTCCGAGGGACACGGAAGGCCATGGAACCCACACTGCATCAACAGCAGCAGGGAACTTAGTTAGCAAGGCAAGTCTGTATGGTTTAGGGTTGGGGACAGCAAGAGGAGGGGTGCCATCAGCACGCATTGCGGTGTACAAAGTTTGTTGGTCAGACGGGTGCCCGGATGCTGATATTCTAGCGGCATTCGATGATGCCATAGCTGACGGTGTTGACATACTCTCTGTCTCCATTGGGGGGTTTAAACCGTTAGATTATTTCAGAAATTCCATTGACATTGGAGCTTTTCACGCTTTAAGAAAAGGAATATTCACTTCCGCGTCTGCTGGTAATCAAGGTCCAAACCTGAAAACCATTACAAACTTTGCACCATGGTCTCTTGCTGTAGCTGCTAGCACCATAGATCGCCACTTTGATACCAAGGTTCAATTGGGAAACCACAAAATTTATGAGGGAATAGTAACAAACACATTTGAACTCAAGGGTAAATTCTACCCCATAGTATATGCTGCAGACGTTCCAGATAGGGCAGCAGGTTTCGATGGGGAAATTTCCAGGTTTTGCATAATAGGCAGCACGTTAGACCAAAAGCTGGTGAAGGATAAAATTGTTCTTTGCGATGGGCCTACTGGGGATGGGGCTGTAGAGGCAGGCGCATCTGGTTATGTTTTGACAAGCCGAAATGCAGCAGATGTAATCGATCCTGTTCCTGTACCAGCAGCTTCCGTTTGGTTCCATGTTGGTAACGAAATTGCCCATTACATAAACTCAACCAGGAACCCAACAGCAACAATTTGGAAAAGTACTGAGGGTAGGGATGCACTGGCCCCATACGTACCTTCATTCTCATCAAGGGGTCCAAATCCAAACACTCCTAACATTCTCAAGCCAGATATCGCTTCTCCTGGAGTTTCCATTCTAGCCGCATGGTCTCCAATTGCCCCAGTTTCAGGTTTTGAAGGTGATGACAGGGTAACTTCATACAATATAATCTCGGGGACATCAATGGCATGCCCACATGCTGCGGGCGTGGCTGCATACGTCAAATCATTTCACCCCAATTGGTCACCTGCTGCAATCCTGTCAGCTCTTACAAGTACTGGTATAGATGCATTTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

575

Amino Acids

61.13

Weight (kDa)

5.92

Isoelectric Point (pI)

34.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 34 - 114 3.3e-18 Peptidase inhibitor I9
MORF_dom PF21864 34 - 112 2.3e-06 Multiple organellar RNA editing factor 1, MORF domain
Peptidase_S8 PF00082 137 - 568 5.5e-40 Subtilase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000390)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18050 FvH4_7g18050
malus_domestica MD07G1206200.v1.1 MD07G1206400.v1.1 MD07G1206500.v1.1 MD07G1206700.v1.1 MD07G1207000.v1.1 MD07G1207100.v1.1 MD07G1207200.v1.1
prunus_persica Prupe.2G166200_v2.0.a1 Prupe.2G242000_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242400_v2.0.a1
pyrus_communis pycom07g19260 pycom07g19280 pycom07g19290
rosa_chinensis RchiOBHm_Chr1g0325901 RchiOBHm_Chr1g0325961 RchiOBHm_Chr1g0344281 RchiOBHm_Chr1g0344291 RchiOBHm_Chr1g0344301 RchiOBHm_Chr1g0368771 RchiOBHm_Chr1g0369141 RchiOBHm_Chr1g0369281 RchiOBHm_Chr1g0369291 RchiOBHm_Chr1g0369661 RchiOBHm_Chr1g0370161 RchiOBHm_Chr4g0396401
rosa_laevigata RLG00000009546 RLG00000027070 RLG00000027140 RLG00000027151 RLG00000027152 RLG00000027190 RLG00000027255 RLG00000028909 RLG00000030094 RLG00000030097
rosa_multiflora Rmu_co8196240.1_g000001 Rmu_co8379125.1_g000001 Rmu_co8402573.1_g000001 Rmu_co8479243.1_g000001 Rmu_sc0000019.1_g000019 Rmu_sc0001154.1_g000009 Rmu_sc0001482.1_g000014 Rmu_sc0004250.1_g000009 Rmu_sc0006696.1_g000002 Rmu_sc0006696.1_g000004 Rmu_sc0008679.1_g000018 Rmu_sc0009743.1_g000003 Rmu_sc0013657.1_g000023
rosa_roxburghii Rroxscaffold_4G00286760 Rroxscaffold_4G00287250 Rroxscaffold_4G00287470 Rroxscaffold_4G00287770 Rroxscaffold_4G00287930 Rroxscaffold_4G00309920 Rroxscaffold_4G00324120
rosa_rugosa Rorug01G0055900 Rorug01G0173100 Rorug01G0173200 Rorug01G0337700 Rorug01G0337800 Rorug01G0337800 Rorug01G0337800 Rorug01G0344900 Rorug01G0349400 Rorug01G0349400 Rorug01G0351700 Rorug01G0354500
rosa_samantha Rh1AG072300 Rh1AG189000 Rh1AG189100 Rh1AG351900 Rh1AG356500 Rh1AG359800 Rh1AG363200 Rh1BG059100 Rh1BG155800 Rh1BG306800 Rh1BG315600 Rh1BG319000 Rh1BG320300 Rh1BG326300 Rh1BG326400 Rh1CG071600 Rh1CG174600 Rh1CG174800 Rh1CG322400 Rh1CG330300 Rh1CG334200 Rh1CG339600
rosa_wichuraiana Rw1G005870 Rw1G005900 Rw1G015560 Rw1G031350 Rw1G031470 Rw1G031700 Rw1G031960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1681
Acc16I TGCGCA 1 cut(s) 207
Acc36I ACCTGC 2 cut(s) 1127, 1681
AccB1I GGYRCC 2 cut(s) 715, 762
AccB7I CCANNNNNTGG 2 cut(s) 495, 1195
AccII CGCG 1 cut(s) 923
AciI CCGC 6 cut(s) 565, 734, 785, 921, 1527, 1628
AclWI GGATC 1 cut(s) 1298
AcsI RAATTY 5 cut(s) 438, 868, 1047, 1091, 1152
AcuI CTGAAG 1 cut(s) 445
AcyI GRCGYC 1 cut(s) 468
AfaI GTAC 5 cut(s) 740, 1317, 1408, 1440, 1702
AfiI CCNNNNNNNGG 5 cut(s) 492, 495, 840, 1195, 1553
AgsI TTSAA 5 cut(s) 247, 404, 1031, 1079, 1562
AjnI CCWGG 4 cut(s) 81, 1157, 1376, 1507
Alw21I GWGCWC 1 cut(s) 556
Alw26I GTCTC 4 cut(s) 609, 835, 984, 1539
AlwI GGATC 1 cut(s) 1298
Ama87I CYCGRG 1 cut(s) 1597
AoxI GGCC 4 cut(s) 443, 622, 1226, 1428
ApoI RAATTY 5 cut(s) 438, 868, 1047, 1091, 1152
ArsI GACNNNNNNTTYG 2 cut(s) 458, 490
AspLEI GCGC 4 cut(s) 208, 398, 506, 1259
AspS9I GGNCC 5 cut(s) 479, 941, 1226, 1429, 1460
AsuC2I CCSGG 3 cut(s) 91, 472, 767
AsuHPI GGTGA 7 cut(s) 71, 128, 397, 1210, 1577, 1649, 1662
AsuNHI GCTAGC 1 cut(s) 995
AvaI CYCGRG 1 cut(s) 1597
AvaII GGWCC 3 cut(s) 479, 941, 1460
BaeGI GKGCMC 1 cut(s) 767
BaeI ACNNNNGTAYC 2 cut(s) 1011, 1044
BanI GGYRCC 2 cut(s) 715, 762
Bbv12I GWGCWC 1 cut(s) 556
BccI CCATC 5 cut(s) 296, 727, 1139, 1217, 1232
BciT130I CCWGG 4 cut(s) 83, 1159, 1378, 1509
BciVI GTATCC 1 cut(s) 79
BcnI CCSGG 3 cut(s) 91, 472, 767
BcoDI GTCTC 4 cut(s) 609, 835, 984, 1539
BfaI CTAG 4 cut(s) 324, 782, 996, 1523
BfmI CTRYAG 3 cut(s) 987, 1113, 1245
BfoI RGCGCY 1 cut(s) 399
BfuAI ACCTGC 2 cut(s) 1127, 1681
BfuI GTATCC 1 cut(s) 79
BmcAI AGTACT 2 cut(s) 1408, 1702
Bme1390I CCNGG 7 cut(s) 83, 91, 472, 767, 1159, 1378, 1509
Bme18I GGWCC 3 cut(s) 479, 941, 1460
BmeT110I CYCGRG 1 cut(s) 1597
BmgT120I GGNCC 5 cut(s) 479, 941, 1226, 1429, 1460
BmiI GGNNCC 7 cut(s) 631, 717, 764, 1337, 1382, 1431, 1461
BmrFI CCNGG 7 cut(s) 83, 91, 472, 767, 1159, 1378, 1509
BmrI ACTGGG 2 cut(s) 1242, 1541
BmsI GCATC 6 cut(s) 650, 760, 787, 1268, 1411, 1702
BmtI GCTAGC 1 cut(s) 999
BmuI ACTGGG 2 cut(s) 1242, 1541
BpmI CTGGAG 1 cut(s) 1530
BpuEI CTTGAG 2 cut(s) 1067, 1472
BpuMI CCSGG 3 cut(s) 91, 472, 767
Bsa29I ATCGAT 2 cut(s) 189, 1302
BsaAI YACGTR 1 cut(s) 1438
BsaHI GRCGYC 1 cut(s) 468
BsaI GGTCTC 2 cut(s) 984, 1539
BsaJI CCNNGG 5 cut(s) 14, 608, 625, 974, 1023
Bsc4I CCNNNNNNNGG 5 cut(s) 492, 495, 840, 1195, 1553
Bse1I ACTGG 6 cut(s) 53, 439, 1237, 1431, 1547, 1708
Bse3DI GCAATG 1 cut(s) 729
BseBI CCWGG 4 cut(s) 83, 1159, 1378, 1509
BseCI ATCGAT 2 cut(s) 189, 1302
BseDI CCNNGG 5 cut(s) 14, 608, 625, 974, 1023
BseGI GGATG 4 cut(s) 307, 775, 1243, 1426
BseLI CCNNNNNNNGG 5 cut(s) 492, 495, 840, 1195, 1553
BseMI GCAATG 1 cut(s) 729
BseMII CTCAG 1 cut(s) 1401
BseNI ACTGG 6 cut(s) 53, 439, 1237, 1431, 1547, 1708
BseRI GAGGAG 1 cut(s) 723
BseSI GKGCMC 1 cut(s) 767
BsgI GTGCAG 1 cut(s) 209
Bsh1236I CGCG 1 cut(s) 923
BshFI GGCC 4 cut(s) 445, 624, 1228, 1430
BshNI GGYRCC 2 cut(s) 715, 762
BshVI ATCGAT 2 cut(s) 189, 1302
BsiHKAI GWGCWC 1 cut(s) 556
BsiHKCI CYCGRG 1 cut(s) 1597
BsiSI CCGG 3 cut(s) 91, 471, 767
BslFI GGGAC 4 cut(s) 374, 626, 712, 1615
BslI CCNNNNNNNGG 5 cut(s) 492, 495, 840, 1195, 1553
BsmAI GTCTC 4 cut(s) 609, 835, 984, 1539
BsmFI GGGAC 4 cut(s) 374, 626, 712, 1615
BsmI GAATGC 1 cut(s) 788
BsnI GGCC 4 cut(s) 445, 624, 1228, 1430
Bso31I GGTCTC 2 cut(s) 984, 1539
BsoBI CYCGRG 1 cut(s) 1597
Bsp1286I GDGCHC 2 cut(s) 556, 767
Bsp1407I TGTACA 1 cut(s) 738
Bsp143I GATC 2 cut(s) 1006, 1303
Bsp19I CCATGG 3 cut(s) 14, 625, 974
BspACI CCGC 6 cut(s) 565, 734, 785, 921, 1527, 1628
BspANI GGCC 4 cut(s) 445, 624, 1228, 1430
BspCNI CTCAG 1 cut(s) 1402
BspDI ATCGAT 2 cut(s) 189, 1302
BspFNI CGCG 1 cut(s) 923
BspLI GGNNCC 7 cut(s) 631, 717, 764, 1337, 1382, 1431, 1461
BspMAI CTGCAG 1 cut(s) 1117
BspMI ACCTGC 2 cut(s) 1127, 1681
BspOI GCTAGC 1 cut(s) 999
BspPI GGATC 1 cut(s) 1298
BspQI GCTCTTC 1 cut(s) 165
BspT107I GGYRCC 2 cut(s) 715, 762
BspTNI GGTCTC 2 cut(s) 984, 1539
BsrDI GCAATG 1 cut(s) 729
BsrGI TGTACA 1 cut(s) 738
BsrI ACTGG 6 cut(s) 53, 439, 1237, 1431, 1547, 1708
BssECI CCNNGG 5 cut(s) 14, 608, 625, 974, 1023
BssMI GATC 2 cut(s) 1006, 1303
BssNI GRCGYC 1 cut(s) 468
BssT1I CCWWGG 4 cut(s) 14, 625, 974, 1023
Bst2UI CCWGG 4 cut(s) 83, 1159, 1378, 1509
Bst4CI ACNGT 3 cut(s) 558, 812, 852
Bst6I CTCTTC 2 cut(s) 165, 383
BstACI GRCGYC 1 cut(s) 468
BstAPI GCANNNNNTGC 1 cut(s) 731
BstAUI TGTACA 1 cut(s) 738
BstBAI YACGTR 1 cut(s) 1438
BstC8I GCNNGC 7 cut(s) 457, 508, 727, 997, 1255, 1615, 1630
BstDEI CTNAG 3 cut(s) 333, 661, 1410
BstDSI CCRYGG 3 cut(s) 14, 625, 974
BstEII GGTNACC 1 cut(s) 1668
BstF5I GGATG 4 cut(s) 307, 775, 1243, 1426
BstFNI CGCG 1 cut(s) 923
BstH2I RGCGCY 1 cut(s) 399
BstHHI GCGC 4 cut(s) 208, 398, 506, 1259
BstKTI GATC 2 cut(s) 1009, 1306
BstMAI GTCTC 4 cut(s) 609, 835, 984, 1539
BstMBI GATC 2 cut(s) 1006, 1303
BstMWI GCNNNNNNNGC 7 cut(s) 647, 731, 893, 992, 1173, 1250, 1634
BstNI CCWGG 4 cut(s) 83, 1159, 1378, 1509
BstNSI RCATGY 4 cut(s) 175, 510, 1617, 1625
BstPI GGTNACC 1 cut(s) 1668
BstSCI CCNGG 7 cut(s) 81, 89, 470, 765, 1157, 1376, 1507
BstSFI CTRYAG 3 cut(s) 987, 1113, 1245
BstSLI GKGCMC 1 cut(s) 767
BstSNI TACGTA 1 cut(s) 1438
BstUI CGCG 1 cut(s) 923
Bsu15I ATCGAT 2 cut(s) 189, 1302
BsuI GTATCC 1 cut(s) 79
BsuRI GGCC 4 cut(s) 445, 624, 1228, 1430
BsuTUI ATCGAT 2 cut(s) 189, 1302
BtgI CCRYGG 3 cut(s) 14, 625, 974
BtgZI GCGATG 1 cut(s) 1236
BtsCI GGATG 4 cut(s) 307, 775, 1243, 1426
BtsI GCAGTG 2 cut(s) 598, 636
BtsIMutI CAGTG 5 cut(s) 432, 469, 598, 636, 1424
BveI ACCTGC 2 cut(s) 1127, 1681
Cac8I GCNNGC 7 cut(s) 457, 508, 727, 997, 1255, 1615, 1630
CfoI GCGC 4 cut(s) 208, 398, 506, 1259
Cfr13I GGNCC 5 cut(s) 479, 941, 1226, 1429, 1460
ClaI ATCGAT 2 cut(s) 189, 1302
CseI GACGC 2 cut(s) 476, 912
Csp6I GTAC 5 cut(s) 739, 1316, 1407, 1439, 1701
CviQI GTAC 5 cut(s) 739, 1316, 1407, 1439, 1701
DdeI CTNAG 3 cut(s) 333, 661, 1410
DpnI GATC 2 cut(s) 1008, 1305
DpnII GATC 2 cut(s) 1006, 1303
DraI TTTAAA 1 cut(s) 847
Eam1104I CTCTTC 2 cut(s) 165, 383
EarI CTCTTC 2 cut(s) 165, 383
Eco105I TACGTA 1 cut(s) 1438
Eco130I CCWWGG 4 cut(s) 14, 625, 974, 1023
Eco31I GGTCTC 2 cut(s) 984, 1539
Eco32I GATATC 2 cut(s) 412, 1498
Eco47I GGWCC 3 cut(s) 479, 941, 1460
Eco57I CTGAAG 1 cut(s) 445
Eco88I CYCGRG 1 cut(s) 1597
Eco91I GGTNACC 1 cut(s) 1668
EcoO65I GGTNACC 1 cut(s) 1668
EcoRII CCWGG 4 cut(s) 81, 1157, 1376, 1507
EcoRV GATATC 2 cut(s) 412, 1498
EcoT14I CCWWGG 4 cut(s) 14, 625, 974, 1023
EcoT22I ATGCAT 1 cut(s) 1717
ErhI CCWWGG 4 cut(s) 14, 625, 974, 1023
FalI AAGNNNNNCTT 2 cut(s) 227, 259
FaqI GGGAC 4 cut(s) 374, 626, 712, 1615
FauI CCCGC 1 cut(s) 1621
FokI GGATG 4 cut(s) 314, 782, 1250, 1433
FspBI CTAG 4 cut(s) 324, 782, 996, 1523
FspI TGCGCA 1 cut(s) 207
GlaI GCGC 4 cut(s) 207, 397, 505, 1258
GsuI CTGGAG 1 cut(s) 1530
HaeII RGCGCY 1 cut(s) 399
HaeIII GGCC 4 cut(s) 445, 624, 1228, 1430
HapII CCGG 3 cut(s) 91, 471, 767
HgaI GACGC 2 cut(s) 476, 912
HhaI GCGC 4 cut(s) 208, 398, 506, 1259
Hin1I GRCGYC 1 cut(s) 468
Hin6I GCGC 4 cut(s) 206, 396, 504, 1257
HinP1I GCGC 4 cut(s) 206, 396, 504, 1257
HincII GTYRAC 2 cut(s) 572, 817
HindII GTYRAC 2 cut(s) 572, 817
HinfI GANTC 2 cut(s) 212, 449
HpaII CCGG 3 cut(s) 91, 471, 767
HphI GGTGA 7 cut(s) 71, 128, 397, 1210, 1577, 1649, 1662
Hpy166II GTNNAC 5 cut(s) 169, 482, 572, 739, 817
Hpy188I TCNGA 4 cut(s) 551, 609, 757, 866
Hpy188III TCNNGA 2 cut(s) 377, 1124
Hpy8I GTNNAC 5 cut(s) 169, 482, 572, 739, 817
HpyAV CCTTC 8 cut(s) 35, 88, 253, 512, 614, 1195, 1452, 1556
HpyCH4III ACNGT 3 cut(s) 558, 812, 852
HpyCH4IV ACGT 5 cut(s) 183, 1119, 1181, 1437, 1644
HpyF10VI GCNNNNNNNGC 7 cut(s) 647, 731, 893, 992, 1173, 1250, 1634
HpyF3I CTNAG 3 cut(s) 333, 661, 1410
HpySE526I ACGT 5 cut(s) 183, 1119, 1181, 1437, 1644
Hsp92I GRCGYC 1 cut(s) 468
HspAI GCGC 4 cut(s) 206, 396, 504, 1257
Kzo9I GATC 2 cut(s) 1006, 1303
LguI GCTCTTC 1 cut(s) 165
LmnI GCTCC 3 cut(s) 345, 551, 884
LweI GCATC 6 cut(s) 650, 760, 787, 1268, 1411, 1702
MaeI CTAG 4 cut(s) 324, 782, 996, 1523
MaeII ACGT 5 cut(s) 183, 1119, 1181, 1437, 1644
MaeIII GTNAC 7 cut(s) 61, 116, 464, 1063, 1346, 1576, 1668
MalI GATC 2 cut(s) 1008, 1305
MboI GATC 2 cut(s) 1006, 1303
MboII GAAGA 3 cut(s) 152, 287, 400
MfeI CAATTG 3 cut(s) 1031, 1539, 1663
MhlI GDGCHC 2 cut(s) 556, 767
Mph1103I ATGCAT 1 cut(s) 1717
MseI TTAA 3 cut(s) 8, 846, 899
MslI CAYNNNNRTG 1 cut(s) 734
MspI CCGG 3 cut(s) 91, 471, 767
MspR9I CCNGG 7 cut(s) 83, 91, 472, 767, 1159, 1378, 1509
MssI GTTTAAAC 1 cut(s) 847
MunI CAATTG 3 cut(s) 1031, 1539, 1663
Mva1269I GAATGC 1 cut(s) 788
MvaI CCWGG 4 cut(s) 83, 1159, 1378, 1509
MvnI CGCG 1 cut(s) 923
MwoI GCNNNNNNNGC 7 cut(s) 647, 731, 893, 992, 1173, 1250, 1634
NciI CCSGG 3 cut(s) 91, 472, 767
NcoI CCATGG 3 cut(s) 14, 625, 974
NdeII GATC 2 cut(s) 1006, 1303
NheI GCTAGC 1 cut(s) 995
NlaIV GGNNCC 7 cut(s) 631, 717, 764, 1337, 1382, 1431, 1461
NmuCI GTSAC 4 cut(s) 61, 116, 464, 1668
NsbI TGCGCA 1 cut(s) 207
NsiI ATGCAT 1 cut(s) 1717
NspI RCATGY 4 cut(s) 175, 510, 1617, 1625
PaeI GCATGC 2 cut(s) 510, 1617
PaqCI CACCTGC 1 cut(s) 1681
PciSI GCTCTTC 1 cut(s) 165
PctI GAATGC 1 cut(s) 788
PfeI GAWTC 2 cut(s) 212, 449
PflMI CCANNNNNTGG 2 cut(s) 495, 1195
PfoI TCCNGGA 1 cut(s) 1507
PmeI GTTTAAAC 1 cut(s) 847
Ppu21I YACGTR 1 cut(s) 1438
Psp6I CCWGG 4 cut(s) 81, 1157, 1376, 1507
PspEI GGTNACC 1 cut(s) 1668
PspGI CCWGG 4 cut(s) 81, 1157, 1376, 1507
PspN4I GGNNCC 7 cut(s) 631, 717, 764, 1337, 1382, 1431, 1461
PspPI GGNCC 5 cut(s) 479, 941, 1226, 1429, 1460
PstI CTGCAG 1 cut(s) 1117
RsaI GTAC 5 cut(s) 740, 1317, 1408, 1440, 1702
RsaNI GTAC 5 cut(s) 739, 1316, 1407, 1439, 1701
RseI CAYNNNNRTG 1 cut(s) 734
SapI GCTCTTC 1 cut(s) 165
SaqAI TTAA 3 cut(s) 8, 846, 899
Sau3AI GATC 2 cut(s) 1006, 1303
Sau96I GGNCC 5 cut(s) 479, 941, 1226, 1429, 1460
ScaI AGTACT 2 cut(s) 1408, 1702
ScrFI CCNGG 7 cut(s) 83, 91, 472, 767, 1159, 1378, 1509
SduI GDGCHC 2 cut(s) 556, 767
SfaNI GCATC 6 cut(s) 650, 760, 787, 1268, 1411, 1702
SfcI CTRYAG 3 cut(s) 987, 1113, 1245
SinI GGWCC 3 cut(s) 479, 941, 1460
SmiMI CAYNNNNRTG 1 cut(s) 734
SmlI CTYRAG 2 cut(s) 1082, 1487
SmoI CTYRAG 2 cut(s) 1082, 1487
SnaBI TACGTA 1 cut(s) 1438
SphI GCATGC 2 cut(s) 510, 1617
SsiI CCGC 6 cut(s) 565, 734, 785, 921, 1527, 1628
SspI AATATT 2 cut(s) 202, 912
SspMI CTAG 4 cut(s) 324, 782, 996, 1523
StyD4I CCNGG 7 cut(s) 81, 89, 470, 765, 1157, 1376, 1507
StyI CCWWGG 4 cut(s) 14, 625, 974, 1023
TaaI ACNGT 3 cut(s) 558, 812, 852
TaiI ACGT 5 cut(s) 186, 1122, 1184, 1440, 1647
TaqI TCGA 4 cut(s) 189, 792, 1143, 1302
TatI WGTACW 3 cut(s) 738, 1406, 1700
TauI GCSGC 2 cut(s) 788, 1529
TfiI GAWTC 2 cut(s) 212, 449
Tru1I TTAA 3 cut(s) 8, 846, 899
Tru9I TTAA 3 cut(s) 8, 846, 899
TscAI CASTG 5 cut(s) 439, 469, 598, 643, 1431
TseFI GTSAC 4 cut(s) 61, 116, 464, 1668
Tsp45I GTSAC 4 cut(s) 61, 116, 464, 1668
TspDTI ATGAA 5 cut(s) 152, 355, 1434, 1572, 1710
TspGWI ACGGA 2 cut(s) 632, 1318
TspRI CASTG 5 cut(s) 439, 469, 598, 643, 1431
Van91I CCANNNNNTGG 2 cut(s) 495, 1195
VpaK11BI GGWCC 3 cut(s) 479, 941, 1460
XapI RAATTY 5 cut(s) 438, 868, 1047, 1091, 1152
XceI RCATGY 4 cut(s) 175, 510, 1617, 1625
XcmI CCANNNNNNNNNTGG 1 cut(s) 1030
XspI CTAG 4 cut(s) 324, 782, 996, 1523
ZrmI AGTACT 2 cut(s) 1408, 1702
Zsp2I ATGCAT 1 cut(s) 1717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.