Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007679

Physical Location & Seq

Genomic Coordinates Forward (+)

27030434 .. 27032419

Gene Structure 1986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G260800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 960 bp

ATGGCTTCCTCTTCTTTCATGGCCATTTTGACCTTGGCTCTCCTTCTGCAAACGGCCACTTCAAATGCTCAACTTTCAACAAATTTCTACTCTAGCTCTTGCCCGAGGGTCTTCTCCACTGTGAGATCCACAGTGCAATCCGCTATACGAAAGGAGGCCCGAATTGGGGCCTCCCTTCTCCGCCTCCACTTCCACGACTGTTTCGTTAATGGATGCGATGGCTCCTTGCTCCTCGACGACACGTCGAGCTTCACTGGAGAGAAAAATGCAGTTCCCAATCGGAATTCTGCACGGGGATTTGACGTGGTCGACAACATAAAGTCGGCAGTGGAGAACGTGTGCCCCGGTGTGGTGTCATGCGCTGATATATTGGCCATTGCTTCCAGAGACTCTGTTGCCATCCTTGGAGGACCAAGTTGGAACGTGAAAGTGGGAAGAAGAGACGCAAGAACTGCAAGCCAGGCCGCTGCTAATAACGGCATCCCCCCTCCAACCTCGAACCTAAACCAGCTGATCTCTAGATTCAATGCTCTTGGCCTTTCCACCAGGGACTTGGTTGCTTTATCTGGATCGCATACAATTGGGCAATCAAGGTGCATACAATTCAGGCCCCGCATATACAATGAGACCAATTTGGATAGCTCCTTCGCCCAAACAAGGCGATCAAACTGCCCAAGAGCCGCTGGCTCAGGGGACAACAACTTGGCCCCACTTGATCTTCAAACCCCTACTGCCTTTGACAACAACTACTTCAAGAACCTCATCCAGAACAAAGGCCTCCTCCACTCTGATCAGCAGTTGTTCAATGGTGGGTCCACTGATTCCATAGTGCGCACCTACAGCAACAGCTACAACACCTTCAGTTCTGACTTTGTGAGCGCCATCATCAAGATGGGAGATATCAAACCTCTCACTGGATCCAATGGGGAGATTAGGAAGAATTGCAGGAAGCCCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

320

Amino Acids

34.32

Weight (kDa)

9.32

Isoelectric Point (pI)

37.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05340
fragaria_vesca	FvH4_7g25570 FvH4_7g25571
malus_domestica	MD01G1162700.v1.1 MD07G1230700.v1.1 MD07G1230900.v1.1
prunus_persica	Prupe.2G260800_v2.0.a1 Prupe.2G260900_v2.0.a1
pyrus_communis	pycom01g17760 pycom07g20830
rosa_chinensis	RchiOBHm_Chr1g0371621 RchiOBHm_Chr1g0371631
rosa_laevigata	RLG00000026950 RLG00000026951
rosa_multiflora	Rmu_sc0000809.1_g000001 Rmu_sc0001916.1_g000015 Rmu_sc0040538.1_g000001
rosa_roxburghii	Rroxscaffold_4G00285530
rosa_rugosa	Rorug01G0365400
rosa_samantha	Rh1AG375500 Rh1CG352100 Rh1DG370000
rosa_wichuraiana	Rw1G033030 Rw1G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	833
AccI	GTMKAC	1 cut(s)	309
AciI	CCGC	5 cut(s)	141, 181, 465, 613, 681
AclWI	GGATC	4 cut(s)	120, 577, 912, 925
AcoI	YGGCCR	3 cut(s)	21, 54, 372
AcsI	RAATTY	2 cut(s)	82, 283
AcuI	CTGAAG	1 cut(s)	844
AfiI	CCNNNNNNNGG	5 cut(s)	165, 166, 349, 657, 914
AflIII	ACRYGT	2 cut(s)	240, 336
AgsI	TTSAA	6 cut(s)	63, 78, 526, 722, 754, 805
AhdI	GACNNNNNGTC	1 cut(s)	241
AjiI	CACGTC	2 cut(s)	243, 304
AjnI	CCWGG	2 cut(s)	459, 545
AluBI	AGCT	5 cut(s)	96, 249, 511, 642, 849
AluI	AGCT	5 cut(s)	96, 249, 511, 642, 849
Alw26I	GTCTC	3 cut(s)	381, 435, 620
AlwI	GGATC	4 cut(s)	120, 577, 912, 925
Ama87I	CYCGRG	1 cut(s)	103
ApeKI	GCWGC	1 cut(s)	467
ApoI	RAATTY	2 cut(s)	82, 283
AspLEI	GCGC	3 cut(s)	362, 834, 881
AspS9I	GGNCC	6 cut(s)	157, 168, 410, 609, 706, 813
AsuC2I	CCSGG	1 cut(s)	345
AvaI	CYCGRG	1 cut(s)	103
AvaII	GGWCC	2 cut(s)	410, 813
BaeGI	GKGCMC	1 cut(s)	344
BalI	TGGCCA	2 cut(s)	23, 374
BamHI	GGATCC	1 cut(s)	917
BbsI	GAAGAC	1 cut(s)	103
BbvI	GCAGC	1 cut(s)	454
BccI	CCATC	4 cut(s)	212, 407, 886, 890
BceAI	ACGGC	2 cut(s)	69, 493
BcgI	CGANNNNNNTGC	2 cut(s)	651, 685
BciT130I	CCWGG	2 cut(s)	461, 547
BclI	TGATCA	1 cut(s)	790
BcnI	CCSGG	1 cut(s)	345
BcoDI	GTCTC	3 cut(s)	381, 435, 620
BfaI	CTAG	2 cut(s)	93, 519
BfmI	CTRYAG	1 cut(s)	838
BfoI	RGCGCY	1 cut(s)	882
BisI	GCNGC	3 cut(s)	465, 468, 681
BlsI	GCNGC	3 cut(s)	466, 469, 682
Bme1390I	CCNGG	3 cut(s)	345, 461, 547
Bme18I	GGWCC	2 cut(s)	410, 813
BmeRI	GACNNNNNGTC	1 cut(s)	241
BmeT110I	CYCGRG	1 cut(s)	103
BmgBI	CACGTC	2 cut(s)	243, 304
BmgT120I	GGNCC	6 cut(s)	157, 168, 410, 609, 706, 813
BmiI	GGNNCC	6 cut(s)	169, 223, 611, 708, 814, 919
BmrFI	CCNGG	3 cut(s)	345, 461, 547
BmsI	GCATC	2 cut(s)	203, 489
BpiI	GAAGAC	1 cut(s)	103
BpmI	CTGGAG	1 cut(s)	276
Bpu10I	CCTNAGC	1 cut(s)	688
BpuMI	CCSGG	1 cut(s)	345
BsaI	GGTCTC	1 cut(s)	620
BsaJI	CCNNGG	5 cut(s)	33, 104, 343, 403, 546
BsaXI	ACNNNNNCTCC	2 cut(s)	323, 353
Bsc4I	CCNNNNNNNGG	5 cut(s)	165, 166, 349, 657, 914
Bse1I	ACTGG	2 cut(s)	259, 919
Bse3DI	GCAATG	1 cut(s)	375
BseBI	CCWGG	2 cut(s)	461, 547
BseDI	CCNNGG	5 cut(s)	33, 104, 343, 403, 546
BseGI	GGATG	4 cut(s)	218, 399, 480, 762
BseLI	CCNNNNNNNGG	5 cut(s)	165, 166, 349, 657, 914
BseMI	GCAATG	1 cut(s)	375
BseMII	CTCAG	1 cut(s)	702
BseNI	ACTGG	2 cut(s)	259, 919
BseRI	GAGGAG	2 cut(s)	221, 770
BseSI	GKGCMC	1 cut(s)	344
BseXI	GCAGC	1 cut(s)	454
BsgI	GTGCAG	1 cut(s)	273
BsiHKCI	CYCGRG	1 cut(s)	103
BsiSI	CCGG	1 cut(s)	345
BslFI	GGGAC	2 cut(s)	563, 707
BslI	CCNNNNNNNGG	5 cut(s)	165, 166, 349, 657, 914
BsmAI	GTCTC	3 cut(s)	381, 435, 620
BsmBI	CGTCTC	1 cut(s)	435
BsmFI	GGGAC	2 cut(s)	563, 707
Bso31I	GGTCTC	1 cut(s)	620
BsoBI	CYCGRG	1 cut(s)	103
Bsp1286I	GDGCHC	1 cut(s)	344
Bsp143I	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
BspACI	CCGC	5 cut(s)	141, 181, 465, 613, 681
BspCNI	CTCAG	1 cut(s)	701
BspLI	GGNNCC	6 cut(s)	169, 223, 611, 708, 814, 919
BspPI	GGATC	4 cut(s)	120, 577, 912, 925
BspTNI	GGTCTC	1 cut(s)	620
BsrDI	GCAATG	1 cut(s)	375
BsrI	ACTGG	2 cut(s)	259, 919
BssECI	CCNNGG	5 cut(s)	33, 104, 343, 403, 546
BssMI	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
BssT1I	CCWWGG	2 cut(s)	33, 403
Bst2UI	CCWGG	2 cut(s)	461, 547
Bst4CI	ACNGT	3 cut(s)	121, 133, 200
Bst6I	CTCTTC	2 cut(s)	16, 433
BstAPI	GCANNNNNTGC	1 cut(s)	452
BstC8I	GCNNGC	2 cut(s)	457, 685
BstDEI	CTNAG	1 cut(s)	688
BstF5I	GGATG	4 cut(s)	218, 399, 480, 762
BstH2I	RGCGCY	1 cut(s)	882
BstHHI	GCGC	3 cut(s)	362, 834, 881
BstKTI	GATC	7 cut(s)	128, 516, 572, 665, 718, 793, 920
BstMAI	GTCTC	3 cut(s)	381, 435, 620
BstMBI	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
BstMWI	GCNNNNNNNGC	3 cut(s)	452, 461, 840
BstNI	CCWGG	2 cut(s)	461, 547
BstSCI	CCNGG	3 cut(s)	343, 459, 545
BstSFI	CTRYAG	1 cut(s)	838
BstSLI	GKGCMC	1 cut(s)	344
BstV1I	GCAGC	1 cut(s)	454
BstV2I	GAAGAC	1 cut(s)	103
BstX2I	RGATCY	2 cut(s)	125, 917
BstXI	CCANNNNNNTGG	1 cut(s)	553
BstYI	RGATCY	2 cut(s)	125, 917
BtgZI	GCGATG	1 cut(s)	231
BtrI	CACGTC	2 cut(s)	243, 304
BtsCI	GGATG	4 cut(s)	218, 399, 480, 762
BtsI	GCAGTG	1 cut(s)	333
BtsIMutI	CAGTG	6 cut(s)	117, 138, 252, 333, 816, 912
Cac8I	GCNNGC	2 cut(s)	457, 685
CfoI	GCGC	3 cut(s)	362, 834, 881
Cfr13I	GGNCC	6 cut(s)	157, 168, 410, 609, 706, 813
CseI	GACGC	1 cut(s)	452
CviAII	CATG	2 cut(s)	19, 357
DdeI	CTNAG	1 cut(s)	688
DpnI	GATC	7 cut(s)	127, 515, 571, 664, 717, 792, 919
DpnII	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
DriI	GACNNNNNGTC	1 cut(s)	241
EaeI	YGGCCR	3 cut(s)	21, 54, 372
Eam1104I	CTCTTC	2 cut(s)	16, 433
Eam1105I	GACNNNNNGTC	1 cut(s)	241
EarI	CTCTTC	2 cut(s)	16, 433
EciI	GGCGGA	1 cut(s)	170
Eco130I	CCWWGG	2 cut(s)	33, 403
Eco147I	AGGCCT	1 cut(s)	777
Eco31I	GGTCTC	1 cut(s)	620
Eco32I	GATATC	1 cut(s)	901
Eco47I	GGWCC	2 cut(s)	410, 813
Eco57I	CTGAAG	1 cut(s)	844
Eco88I	CYCGRG	1 cut(s)	103
EcoO109I	RGGNCCY	2 cut(s)	168, 609
EcoRI	GAATTC	1 cut(s)	283
EcoRII	CCWGG	2 cut(s)	459, 545
EcoRV	GATATC	1 cut(s)	901
EcoT14I	CCWWGG	2 cut(s)	33, 403
ErhI	CCWWGG	2 cut(s)	33, 403
Esp3I	CGTCTC	1 cut(s)	435
FaeI	CATG	2 cut(s)	22, 360
FaqI	GGGAC	2 cut(s)	563, 707
FatI	CATG	2 cut(s)	18, 356
FauI	CCCGC	1 cut(s)	620
FbaI	TGATCA	1 cut(s)	790
FblI	GTMKAC	1 cut(s)	309
Fnu4HI	GCNGC	3 cut(s)	465, 468, 681
FokI	GGATG	4 cut(s)	225, 386, 467, 749
Fsp4HI	GCNGC	3 cut(s)	465, 468, 681
FspAI	RTGCGCAY	1 cut(s)	833
FspBI	CTAG	2 cut(s)	93, 519
FspI	TGCGCA	1 cut(s)	833
GlaI	GCGC	3 cut(s)	361, 833, 880
GluI	GCNGC	3 cut(s)	465, 468, 681
GsuI	CTGGAG	1 cut(s)	276
HaeII	RGCGCY	1 cut(s)	882
HapII	CCGG	1 cut(s)	345
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	3 cut(s)	362, 834, 881
Hin1II	CATG	2 cut(s)	22, 360
Hin6I	GCGC	3 cut(s)	360, 832, 879
HinP1I	GCGC	3 cut(s)	360, 832, 879
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HinfI	GANTC	3 cut(s)	389, 522, 821
HpaII	CCGG	1 cut(s)	345
Hpy166II	GTNNAC	2 cut(s)	310, 816
Hpy188I	TCNGA	3 cut(s)	282, 790, 868
Hpy188III	TCNNGA	6 cut(s)	384, 519, 567, 754, 766, 889
Hpy8I	GTNNAC	2 cut(s)	310, 816
Hpy99I	CGWCG	2 cut(s)	239, 247
HpyAV	CCTTC	4 cut(s)	53, 185, 655, 868
HpyCH4III	ACNGT	3 cut(s)	121, 133, 200
HpyCH4IV	ACGT	4 cut(s)	242, 303, 336, 423
HpyCH4V	TGCA	7 cut(s)	49, 136, 269, 290, 455, 597, 945
HpyF10VI	GCNNNNNNNGC	3 cut(s)	452, 461, 840
HpyF3I	CTNAG	1 cut(s)	688
HpySE526I	ACGT	4 cut(s)	242, 303, 336, 423
Hsp92II	CATG	2 cut(s)	22, 360
HspAI	GCGC	3 cut(s)	360, 832, 879
Ksp22I	TGATCA	1 cut(s)	790
Kzo9I	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
LmnI	GCTCC	3 cut(s)	227, 234, 647
Lsp1109I	GCAGC	1 cut(s)	454
LweI	GCATC	2 cut(s)	203, 489
MaeI	CTAG	2 cut(s)	93, 519
MaeII	ACGT	4 cut(s)	242, 303, 336, 423
MalI	GATC	7 cut(s)	127, 515, 571, 664, 717, 792, 919
MboI	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
MboII	GAAGA	6 cut(s)	3, 103, 447, 450, 710, 949
MfeI	CAATTG	1 cut(s)	579
MflI	RGATCY	2 cut(s)	125, 917
MhlI	GDGCHC	1 cut(s)	344
MlsI	TGGCCA	2 cut(s)	23, 374
MluCI	AATT	8 cut(s)	82, 162, 283, 579, 602, 631, 940, 955
MluNI	TGGCCA	2 cut(s)	23, 374
MlyI	GAGTC	1 cut(s)	383
MmeI	TCCRAC	2 cut(s)	398, 515
Mox20I	TGGCCA	2 cut(s)	23, 374
MscI	TGGCCA	2 cut(s)	23, 374
MseI	TTAA	2 cut(s)	207, 958
MslI	CAYNNNNRTG	1 cut(s)	890
Msp20I	TGGCCA	2 cut(s)	23, 374
MspA1I	CMGCKG	3 cut(s)	467, 511, 683
MspI	CCGG	1 cut(s)	345
MspR9I	CCNGG	3 cut(s)	345, 461, 547
MunI	CAATTG	1 cut(s)	579
MvaI	CCWGG	2 cut(s)	461, 547
MwoI	GCNNNNNNNGC	3 cut(s)	452, 461, 840
NciI	CCSGG	1 cut(s)	345
NdeII	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
NlaIII	CATG	2 cut(s)	22, 360
NlaIV	GGNNCC	6 cut(s)	169, 223, 611, 708, 814, 919
NsbI	TGCGCA	1 cut(s)	833
PceI	AGGCCT	1 cut(s)	777
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PfeI	GAWTC	2 cut(s)	522, 821
PflFI	GACNNNGTC	1 cut(s)	305
PkrI	GCNGC	3 cut(s)	466, 469, 682
PleI	GAGTC	1 cut(s)	383
PpsI	GAGTC	1 cut(s)	383
Psp6I	CCWGG	2 cut(s)	459, 545
PspGI	CCWGG	2 cut(s)	459, 545
PspN4I	GGNNCC	6 cut(s)	169, 223, 611, 708, 814, 919
PspPI	GGNCC	6 cut(s)	157, 168, 410, 609, 706, 813
PsuI	RGATCY	2 cut(s)	125, 917
PsyI	GACNNNGTC	1 cut(s)	305
PvuII	CAGCTG	1 cut(s)	511
RseI	CAYNNNNRTG	1 cut(s)	890
SalI	GTCGAC	1 cut(s)	308
SaqAI	TTAA	2 cut(s)	207, 958
SatI	GCNGC	3 cut(s)	465, 468, 681
Sau3AI	GATC	7 cut(s)	125, 513, 569, 662, 715, 790, 917
Sau96I	GGNCC	6 cut(s)	157, 168, 410, 609, 706, 813
SchI	GAGTC	1 cut(s)	383
ScrFI	CCNGG	3 cut(s)	345, 461, 547
SduI	GDGCHC	1 cut(s)	344
SfaNI	GCATC	2 cut(s)	203, 489
SfcI	CTRYAG	1 cut(s)	838
SinI	GGWCC	2 cut(s)	410, 813
SmiMI	CAYNNNNRTG	1 cut(s)	890
Sse9I	AATT	8 cut(s)	82, 162, 283, 579, 602, 631, 940, 955
SseBI	AGGCCT	1 cut(s)	777
SsiI	CCGC	5 cut(s)	141, 181, 465, 613, 681
SspMI	CTAG	2 cut(s)	93, 519
StuI	AGGCCT	1 cut(s)	777
StyD4I	CCNGG	3 cut(s)	343, 459, 545
StyI	CCWWGG	2 cut(s)	33, 403
TaaI	ACNGT	3 cut(s)	121, 133, 200
TaiI	ACGT	4 cut(s)	245, 306, 339, 426
TaqI	TCGA	4 cut(s)	234, 245, 309, 497
TasI	AATT	8 cut(s)	82, 162, 283, 579, 602, 631, 940, 955
TauI	GCSGC	2 cut(s)	467, 683
TfiI	GAWTC	2 cut(s)	522, 821
Tru1I	TTAA	2 cut(s)	207, 958
Tru9I	TTAA	2 cut(s)	207, 958
TscAI	CASTG	6 cut(s)	124, 138, 259, 333, 823, 919
TseI	GCWGC	1 cut(s)	467
TspDTI	ATGAA	1 cut(s)	7
TspRI	CASTG	6 cut(s)	124, 138, 259, 333, 823, 919
Tth111I	GACNNNGTC	1 cut(s)	305
VpaK11BI	GGWCC	2 cut(s)	410, 813
XapI	RAATTY	2 cut(s)	82, 283
XbaI	TCTAGA	1 cut(s)	518
XcmI	CCANNNNNNNNNTGG	3 cut(s)	31, 550, 889
XmiI	GTMKAC	1 cut(s)	309
XspI	CTAG	2 cut(s)	93, 519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.