Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0007679

Physical Location & Seq

Genomic Coordinates Forward (+)

60832488 .. 60836118

Gene Structure 3631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG375500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGCTTCATCTTCCTTCATTGCCATTTTGACCTTTGCTTTCCTTCTGTTCCTGGGCACCACTAGAGCTCAACTTTCAACGAACTTTTACTCCAACTCTTGCCCCAGGCTCTTCTCCACCGTGAAATCTACCGTGCAATCTGCAATAAAAAACGAGGCCCGGATGGGCGCCTCCCTCCTCCGCCTCCACTTCCACGACTGCTTTGTCAACGGTTGCGATGGCTCGGTGTTGCTGGATGACACAGCAAACTTTAAGGGAGAGAAAAATGCAGTTCCTAATCAGAATTCGGTTCGAGGATTCAACGTGATCGATAACATCAAGTCTGCAGTCGAGAATGCGTGCCCCGGCGTGGTCTCATGTGCTGATATTTTAGCCATTACTGCCAGGGACTCTGTTGTTATCCTTGGAGGACCTAGTTGGAATGTTAAATTGGGAAGAAGAGATGCTAGAACTGCTAGCCAAGCTGCTGCTAATAACAGCATTCCCCCTCCAACGTCTAACCTAAACCAACTCATCTCCAGATTCAGTGCTCTTGGCCTTTCCACCAAGGACATGGTTGCTTTATCTGGGTCACATACAATTGGGCAAGCAAGGTGCACAACCTTCAGGGCTCGTATATACAATGAAACTAACTTGGAGAGTACTTTGGCTCAAACAAGGCAATCAAACTGCCCAAGGACCGCTGGCTCAGGGGACAACAACTTGGCTCCACTTGATCTTCAATCTCCAACAGCGTTCGACAACAACTACTACAAGAACCTTATCCAGAACAGAGCAATGGCATCCTCTTATCCCCTAATGGCCATTTTCATGACCTTGGCTCTGGTTGCGAGCACCGACAGCGCTGGACTTTCGACAGCTTTTTACTCCTCATCTTGTCCAAAGCTCTTCTCCACCGTGAAACCTATAGTCCAATCCGCAATCAATAAGAATCCCCGAATGGGTGCCTGTCTTCTCCGCCTATTCTTCCACGATTGTTTTGTTAATGGATGTGATGCGTCGTTGCTCCTGGACGATGCGCCGAACTTTATAGGAGAGAAAAATGTGCCTCCGAACAAGAACTCTACATGTGGATTCGAAGTCATTGATCAAATCAAGTCCACCGTCGAGAGAGTGTGCCCGGGCAGAGTCCCTTGTGCCGATATAGTTGCTATTGCAGCAAGAGACACTGTTGGCATTCTTGGAGGGCCAAAATGGGAAGTCCAATTGGGAAGATTAGACGCGAGGGCTACAAACCCCATCATCGCCAACATCAGCATACCAACTTCAAAAGCTAGCCTAAACGATCTCATCTTGAGATTTAGCGGCGCCGCCCCCAACCAGCGAGACCTGGTTGTTCTGTCAGGCGCTCACAAACTCGGCCAAGCACAGTGTCACAACTTCAGGAAACGCATATACAACGAGGACAACATCAACAAGGACTTTGCCGAACAAGGAAGAGCTAAATGTCCGAAGACCCCTGGCTCCGGTGACGCCAACTTGGCTCCCATCGACGCTGAAACTCCGACTGTGTTCGACAACAGCTACTACAAGAACCTTGTCCAGAAGAAGGGGCTACTCCATTCCGATCAGCAGTTGTTCAGCGCAGGGCAAACAGATTCACTAGTGAAAACTTACAGTGAAAGCCAGGAAAGCTTCTTCATGGACTTTGTGACTGCTATGCTCAAGATGGGGAGCATCAACCCGCTGATTGGTCCTCCATATATTTGGCGAGGTCAGGGTGATTTGCAGGAGAATCAATCCATTGTTTTGATTCAATCGATCCTGCCACCTACACTTGAAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

595

Amino Acids

64.32

Weight (kDa)

8.61

Isoelectric Point (pI)

38.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	41 - 263	5.7e-81	Peroxidase
peroxidase	PF00141	301 - 541	2.6e-73	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05340
fragaria_vesca	FvH4_7g25570 FvH4_7g25571
malus_domestica	MD01G1162700.v1.1 MD07G1230700.v1.1 MD07G1230900.v1.1
prunus_persica	Prupe.2G260800_v2.0.a1 Prupe.2G260900_v2.0.a1
pyrus_communis	pycom01g17760 pycom07g20830
rosa_chinensis	RchiOBHm_Chr1g0371621 RchiOBHm_Chr1g0371631
rosa_laevigata	RLG00000026950 RLG00000026951
rosa_multiflora	Rmu_sc0000809.1_g000001 Rmu_sc0001916.1_g000015 Rmu_sc0040538.1_g000001
rosa_roxburghii	Rroxscaffold_4G00285530
rosa_rugosa	Rorug01G0365400
rosa_samantha	Rh1AG375500 Rh1CG352100 Rh1DG370000
rosa_wichuraiana	Rw1G033030 Rw1G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	203
AccB1I	GGYRCC	4 cut(s)	56, 167, 944, 1307
AccII	CGCG	1 cut(s)	1223
AciI	CCGC	7 cut(s)	181, 681, 918, 958, 1305, 1311, 1685
AclWI	GGATC	1 cut(s)	1756
AcoI	YGGCCR	2 cut(s)	801, 1360
AcsI	RAATTY	2 cut(s)	283, 1782
AcuI	CTGAAG	2 cut(s)	589, 1366
AcyI	GRCGYC	3 cut(s)	168, 1308, 1473
AfaI	GTAC	1 cut(s)	643
AfeI	AGCGCT	1 cut(s)	844
AfiI	CCNNNNNNNGG	5 cut(s)	349, 941, 1466, 1549, 1691
AflIII	ACRYGT	1 cut(s)	1067
AgsI	TTSAA	6 cut(s)	78, 301, 722, 1269, 1757, 1781
AhlI	ACTAGT	1 cut(s)	1603
AjnI	CCWGG	7 cut(s)	51, 104, 383, 1008, 1329, 1459, 1626
AjuI	GAANNNNNNNTTGG	2 cut(s)	413, 445
AloI	GAACNNNNNNTCC	2 cut(s)	74, 106
AluBI	AGCT	8 cut(s)	68, 464, 860, 886, 1274, 1442, 1524, 1635
AluI	AGCT	8 cut(s)	68, 464, 860, 886, 1274, 1442, 1524, 1635
Alw21I	GWGCWC	4 cut(s)	70, 532, 599, 836
Alw26I	GTCTC	3 cut(s)	358, 1158, 1320
Alw44I	GTGCAC	1 cut(s)	595
AlwI	GGATC	1 cut(s)	1756
Ama87I	CYCGRG	1 cut(s)	1120
Aor51HI	AGCGCT	1 cut(s)	844
AoxI	GGCC	5 cut(s)	156, 535, 801, 1187, 1360
ApaLI	GTGCAC	1 cut(s)	595
ApeKI	GCWGC	3 cut(s)	464, 467, 1157
ApoI	RAATTY	2 cut(s)	283, 1782
AspLEI	GCGC	6 cut(s)	170, 845, 1021, 1310, 1349, 1586
AspS9I	GGNCC	5 cut(s)	157, 410, 678, 1187, 1694
AsuC2I	CCSGG	4 cut(s)	160, 345, 1121, 1122
AsuHPI	GGTGA	2 cut(s)	1481, 1733
AsuII	TTCGAA	1 cut(s)	1077
AsuNHI	GCTAGC	2 cut(s)	455, 1274
AvaI	CYCGRG	1 cut(s)	1120
AvaII	GGWCC	3 cut(s)	410, 678, 1694
BaeGI	GKGCMC	4 cut(s)	59, 344, 599, 1121
BalI	TGGCCA	1 cut(s)	803
BanI	GGYRCC	4 cut(s)	56, 167, 944, 1307
BanII	GRGCYC	2 cut(s)	70, 613
BbsI	GAAGAC	2 cut(s)	944, 1460
Bbv12I	GWGCWC	4 cut(s)	70, 532, 599, 836
BbvI	GCAGC	3 cut(s)	451, 454, 1169
BccI	CCATC	5 cut(s)	157, 212, 1247, 1496, 1663
BcgI	CGANNNNNNTGC	2 cut(s)	1130, 1164
BciT130I	CCWGG	7 cut(s)	53, 106, 385, 1010, 1331, 1461, 1628
BclI	TGATCA	1 cut(s)	1087
BcnI	CCSGG	4 cut(s)	160, 345, 1121, 1122
BcoDI	GTCTC	3 cut(s)	358, 1158, 1320
BcuI	ACTAGT	1 cut(s)	1603
BfaI	CTAG	6 cut(s)	63, 414, 447, 456, 1275, 1604
BfmI	CTRYAG	2 cut(s)	324, 906
BfoI	RGCGCY	4 cut(s)	171, 846, 1311, 1350
BglI	GCCNNNNNGGC	1 cut(s)	1481
BisI	GCNGC	5 cut(s)	465, 468, 1158, 1306, 1311
BlsI	GCNGC	5 cut(s)	466, 469, 1159, 1307, 1312
BmcAI	AGTACT	1 cut(s)	643
Bme18I	GGWCC	3 cut(s)	410, 678, 1694
BmeT110I	CYCGRG	1 cut(s)	1120
BmgT120I	GGNCC	5 cut(s)	157, 410, 678, 1187, 1694
BmiI	GGNNCC	7 cut(s)	58, 169, 708, 946, 1309, 1465, 1485
BmsI	GCATC	5 cut(s)	433, 791, 985, 1006, 1686
BmtI	GCTAGC	2 cut(s)	459, 1278
BpiI	GAAGAC	2 cut(s)	944, 1460
BpmI	CTGGAG	1 cut(s)	502
Bpu10I	CCTNAGC	1 cut(s)	688
Bpu14I	TTCGAA	1 cut(s)	1077
BpuEI	CTTGAG	2 cut(s)	1315, 1649
BpuMI	CCSGG	4 cut(s)	160, 345, 1121, 1122
Bsa29I	ATCGAT	2 cut(s)	309, 1760
BsaHI	GRCGYC	3 cut(s)	168, 1308, 1473
BsaI	GGTCTC	2 cut(s)	358, 1320
BsaWI	WCCGGW	1 cut(s)	1466
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bsc4I	CCNNNNNNNGG	5 cut(s)	349, 941, 1466, 1549, 1691
Bse3DI	GCAATG	2 cut(s)	18, 783
BseBI	CCWGG	7 cut(s)	53, 106, 385, 1010, 1331, 1461, 1628
BseCI	ATCGAT	2 cut(s)	309, 1760
BseGI	GGATG	4 cut(s)	168, 241, 782, 995
BseLI	CCNNNNNNNGG	5 cut(s)	349, 941, 1466, 1549, 1691
BseMI	GCAATG	2 cut(s)	18, 783
BseMII	CTCAG	1 cut(s)	702
BseRI	GAGGAG	2 cut(s)	167, 859
BseSI	GKGCMC	4 cut(s)	59, 344, 599, 1121
BseXI	GCAGC	3 cut(s)	451, 454, 1169
Bsh1236I	CGCG	1 cut(s)	1223
BshFI	GGCC	5 cut(s)	158, 537, 803, 1189, 1362
BshNI	GGYRCC	4 cut(s)	56, 167, 944, 1307
BshVI	ATCGAT	2 cut(s)	309, 1760
BsiHKAI	GWGCWC	4 cut(s)	70, 532, 599, 836
BsiHKCI	CYCGRG	1 cut(s)	1120
BsiSI	CCGG	4 cut(s)	160, 345, 1121, 1467
BslFI	GGGAC	3 cut(s)	401, 707, 1115
BslI	CCNNNNNNNGG	5 cut(s)	349, 941, 1466, 1549, 1691
BsmAI	GTCTC	3 cut(s)	358, 1158, 1320
BsmFI	GGGAC	3 cut(s)	401, 707, 1115
BsmI	GAATGC	3 cut(s)	340, 480, 1176
BsnI	GGCC	5 cut(s)	158, 537, 803, 1189, 1362
Bso31I	GGTCTC	2 cut(s)	358, 1320
BsoBI	CYCGRG	1 cut(s)	1120
Bsp119I	TTCGAA	1 cut(s)	1077
Bsp1286I	GDGCHC	8 cut(s)	59, 70, 344, 532, 599, 613, 836, 1121
Bsp143I	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
BspACI	CCGC	7 cut(s)	181, 681, 918, 958, 1305, 1311, 1685
BspANI	GGCC	5 cut(s)	158, 537, 803, 1189, 1362
BspCNI	CTCAG	1 cut(s)	701
BspDI	ATCGAT	2 cut(s)	309, 1760
BspFNI	CGCG	1 cut(s)	1223
BspHI	TCATGA	1 cut(s)	810
BspLI	GGNNCC	7 cut(s)	58, 169, 708, 946, 1309, 1465, 1485
BspMAI	CTGCAG	1 cut(s)	328
BspOI	GCTAGC	2 cut(s)	459, 1278
BspPI	GGATC	1 cut(s)	1756
BspQI	GCTCTTC	3 cut(s)	116, 893, 1432
BspT104I	TTCGAA	1 cut(s)	1077
BspT107I	GGYRCC	4 cut(s)	56, 167, 944, 1307
BspTNI	GGTCTC	2 cut(s)	358, 1320
BsrDI	GCAATG	2 cut(s)	18, 783
BssMI	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
BssNI	GRCGYC	3 cut(s)	168, 1308, 1473
BssT1I	CCWWGG	4 cut(s)	403, 546, 674, 816
Bst2UI	CCWGG	7 cut(s)	53, 106, 385, 1010, 1331, 1461, 1628
Bst4CI	ACNGT	9 cut(s)	121, 133, 212, 898, 1105, 1171, 1371, 1510, 1619
Bst6I	CTCTTC	4 cut(s)	116, 433, 893, 1432
BstACI	GRCGYC	3 cut(s)	168, 1308, 1473
BstBI	TTCGAA	1 cut(s)	1077
BstC8I	GCNNGC	6 cut(s)	340, 457, 588, 685, 832, 1276
BstDEI	CTNAG	1 cut(s)	688
BstF5I	GGATG	4 cut(s)	168, 241, 782, 995
BstFNI	CGCG	1 cut(s)	1223
BstH2I	RGCGCY	4 cut(s)	171, 846, 1311, 1350
BstHHI	GCGC	6 cut(s)	170, 845, 1021, 1310, 1349, 1586
BstKTI	GATC	6 cut(s)	309, 718, 1090, 1288, 1570, 1764
BstMAI	GTCTC	3 cut(s)	358, 1158, 1320
BstMBI	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
BstMWI	GCNNNNNNNGC	8 cut(s)	380, 452, 461, 827, 840, 1157, 1481, 1632
BstNI	CCWGG	7 cut(s)	53, 106, 385, 1010, 1331, 1461, 1628
BstNSI	RCATGY	1 cut(s)	1071
BstSFI	CTRYAG	2 cut(s)	324, 906
BstSLI	GKGCMC	4 cut(s)	59, 344, 599, 1121
BstUI	CGCG	1 cut(s)	1223
BstV1I	GCAGC	3 cut(s)	451, 454, 1169
BstV2I	GAAGAC	2 cut(s)	944, 1460
BstXI	CCANNNNNNTGG	2 cut(s)	553, 1707
Bsu15I	ATCGAT	2 cut(s)	309, 1760
BsuRI	GGCC	5 cut(s)	158, 537, 803, 1189, 1362
BsuTUI	ATCGAT	2 cut(s)	309, 1760
BtgZI	GCGATG	2 cut(s)	231, 1228
BtsCI	GGATG	4 cut(s)	168, 241, 782, 995
BtsIMutI	CAGTG	4 cut(s)	532, 1167, 1376, 1624
Cac8I	GCNNGC	6 cut(s)	340, 457, 588, 685, 832, 1276
CciI	TCATGA	1 cut(s)	810
CfoI	GCGC	6 cut(s)	170, 845, 1021, 1310, 1349, 1586
Cfr13I	GGNCC	5 cut(s)	157, 410, 678, 1187, 1694
Cfr9I	CCCGGG	1 cut(s)	1120
ClaI	ATCGAT	2 cut(s)	309, 1760
CseI	GACGC	4 cut(s)	987, 1229, 1481, 1502
CsiI	ACCWGGT	1 cut(s)	1329
Csp6I	GTAC	1 cut(s)	642
CviAII	CATG	5 cut(s)	357, 553, 811, 1068, 1642
CviQI	GTAC	1 cut(s)	642
DdeI	CTNAG	1 cut(s)	688
DinI	GGCGCC	2 cut(s)	169, 1309
DpnI	GATC	6 cut(s)	308, 717, 1089, 1287, 1569, 1763
DpnII	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
DrdI	GACNNNNNNGTC	1 cut(s)	203
DseDI	GACNNNNNNGTC	1 cut(s)	203
EaeI	YGGCCR	2 cut(s)	801, 1360
Eam1104I	CTCTTC	4 cut(s)	116, 433, 893, 1432
EarI	CTCTTC	4 cut(s)	116, 433, 893, 1432
EciI	GGCGGA	2 cut(s)	170, 947
Ecl136II	GAGCTC	1 cut(s)	68
Eco130I	CCWWGG	4 cut(s)	403, 546, 674, 816
Eco24I	GRGCYC	2 cut(s)	70, 613
Eco31I	GGTCTC	2 cut(s)	358, 1320
Eco47I	GGWCC	3 cut(s)	410, 678, 1694
Eco47III	AGCGCT	1 cut(s)	844
Eco53kI	GAGCTC	1 cut(s)	68
Eco57I	CTGAAG	2 cut(s)	589, 1366
Eco88I	CYCGRG	1 cut(s)	1120
EcoICRI	GAGCTC	1 cut(s)	68
EcoO109I	RGGNCCY	1 cut(s)	410
EcoRI	GAATTC	1 cut(s)	283
EcoRII	CCWGG	7 cut(s)	51, 104, 383, 1008, 1329, 1459, 1626
EcoT14I	CCWWGG	4 cut(s)	403, 546, 674, 816
EcoT38I	GRGCYC	2 cut(s)	70, 613
EgeI	GGCGCC	2 cut(s)	169, 1309
EheI	GGCGCC	2 cut(s)	169, 1309
ErhI	CCWWGG	4 cut(s)	403, 546, 674, 816
FaeI	CATG	5 cut(s)	360, 556, 814, 1071, 1645
FaqI	GGGAC	3 cut(s)	401, 707, 1115
FatI	CATG	5 cut(s)	356, 552, 810, 1067, 1641
FauI	CCCGC	1 cut(s)	1692
FbaI	TGATCA	1 cut(s)	1087
Fnu4HI	GCNGC	5 cut(s)	465, 468, 1158, 1306, 1311
FokI	GGATG	4 cut(s)	175, 248, 769, 1002
FriOI	GRGCYC	2 cut(s)	70, 613
Fsp4HI	GCNGC	5 cut(s)	465, 468, 1158, 1306, 1311
FspBI	CTAG	6 cut(s)	63, 414, 447, 456, 1275, 1604
GlaI	GCGC	6 cut(s)	169, 844, 1020, 1309, 1348, 1585
GluI	GCNGC	5 cut(s)	465, 468, 1158, 1306, 1311
GsuI	CTGGAG	1 cut(s)	502
HaeII	RGCGCY	4 cut(s)	171, 846, 1311, 1350
HaeIII	GGCC	5 cut(s)	158, 537, 803, 1189, 1362
HapII	CCGG	4 cut(s)	160, 345, 1121, 1467
HgaI	GACGC	4 cut(s)	987, 1229, 1481, 1502
HhaI	GCGC	6 cut(s)	170, 845, 1021, 1310, 1349, 1586
Hin1I	GRCGYC	3 cut(s)	168, 1308, 1473
Hin1II	CATG	5 cut(s)	360, 556, 814, 1071, 1645
Hin6I	GCGC	6 cut(s)	168, 843, 1019, 1308, 1347, 1584
HinP1I	GCGC	6 cut(s)	168, 843, 1019, 1308, 1347, 1584
HincII	GTYRAC	1 cut(s)	208
HindII	GTYRAC	1 cut(s)	208
HindIII	AAGCTT	1 cut(s)	1633
HinfI	GANTC	9 cut(s)	297, 389, 522, 931, 1074, 1128, 1598, 1735, 1753
HpaII	CCGG	4 cut(s)	160, 345, 1121, 1467
HphI	GGTGA	2 cut(s)	1481, 1733
Hpy166II	GTNNAC	3 cut(s)	208, 597, 1101
Hpy188I	TCNGA	5 cut(s)	282, 1053, 1452, 1506, 1567
Hpy188III	TCNNGA	9 cut(s)	331, 519, 766, 811, 1108, 1294, 1384, 1543, 1666
Hpy8I	GTNNAC	3 cut(s)	208, 597, 1101
Hpy99I	CGWCG	3 cut(s)	1003, 1109, 1496
HpyAV	CCTTC	4 cut(s)	25, 53, 613, 1543
HpyCH4III	ACNGT	9 cut(s)	121, 133, 212, 898, 1105, 1171, 1371, 1510, 1619
HpyCH4IV	ACGT	2 cut(s)	303, 494
HpyCH4V	TGCA	7 cut(s)	136, 143, 269, 326, 597, 1157, 1729
HpyF10VI	GCNNNNNNNGC	8 cut(s)	380, 452, 461, 827, 840, 1157, 1481, 1632
HpyF3I	CTNAG	1 cut(s)	688
HpySE526I	ACGT	2 cut(s)	303, 494
Hsp92I	GRCGYC	3 cut(s)	168, 1308, 1473
Hsp92II	CATG	5 cut(s)	360, 556, 814, 1071, 1645
HspAI	GCGC	6 cut(s)	168, 843, 1019, 1308, 1347, 1584
KasI	GGCGCC	2 cut(s)	167, 1307
Ksp22I	TGATCA	1 cut(s)	1087
Kzo9I	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
LguI	GCTCTTC	3 cut(s)	116, 893, 1432
LmnI	GCTCC	5 cut(s)	712, 1011, 1469, 1489, 1674
Lsp1109I	GCAGC	3 cut(s)	451, 454, 1169
LweI	GCATC	5 cut(s)	433, 791, 985, 1006, 1686
MabI	ACCWGGT	1 cut(s)	1329
MaeI	CTAG	6 cut(s)	63, 414, 447, 456, 1275, 1604
MaeII	ACGT	2 cut(s)	303, 494
MaeIII	GTNAC	4 cut(s)	570, 1373, 1469, 1651
MalI	GATC	6 cut(s)	308, 717, 1089, 1287, 1569, 1763
MboI	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
MfeI	CAATTG	2 cut(s)	579, 1205
MhlI	GDGCHC	8 cut(s)	59, 70, 344, 532, 599, 613, 836, 1121
MlsI	TGGCCA	1 cut(s)	803
MluCI	AATT	5 cut(s)	283, 428, 579, 1205, 1782
MluNI	TGGCCA	1 cut(s)	803
Mly113I	GGCGCC	2 cut(s)	168, 1308
MlyI	GAGTC	2 cut(s)	383, 1137
MmeI	TCCRAC	5 cut(s)	117, 398, 515, 752, 1529
Mox20I	TGGCCA	1 cut(s)	803
MscI	TGGCCA	1 cut(s)	803
MseI	TTAA	3 cut(s)	252, 426, 984
MslI	CAYNNNNRTG	1 cut(s)	809
Msp20I	TGGCCA	1 cut(s)	803
MspA1I	CMGCKG	2 cut(s)	683, 1687
MspI	CCGG	4 cut(s)	160, 345, 1121, 1467
MunI	CAATTG	2 cut(s)	579, 1205
Mva1269I	GAATGC	3 cut(s)	340, 480, 1176
MvaI	CCWGG	7 cut(s)	53, 106, 385, 1010, 1331, 1461, 1628
MvnI	CGCG	1 cut(s)	1223
MwoI	GCNNNNNNNGC	8 cut(s)	380, 452, 461, 827, 840, 1157, 1481, 1632
NarI	GGCGCC	2 cut(s)	168, 1308
NciI	CCSGG	4 cut(s)	160, 345, 1121, 1122
NdeII	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
NheI	GCTAGC	2 cut(s)	455, 1274
NlaIII	CATG	5 cut(s)	360, 556, 814, 1071, 1645
NlaIV	GGNNCC	7 cut(s)	58, 169, 708, 946, 1309, 1465, 1485
NmeAIII	GCCGAG	1 cut(s)	1338
NmuCI	GTSAC	4 cut(s)	570, 1373, 1469, 1651
NspI	RCATGY	1 cut(s)	1071
NspV	TTCGAA	1 cut(s)	1077
PagI	TCATGA	1 cut(s)	810
PciI	ACATGT	1 cut(s)	1067
PciSI	GCTCTTC	3 cut(s)	116, 893, 1432
PctI	GAATGC	3 cut(s)	340, 480, 1176
PfeI	GAWTC	7 cut(s)	297, 522, 931, 1074, 1598, 1735, 1753
PfoI	TCCNGGA	1 cut(s)	1008
PkrI	GCNGC	5 cut(s)	466, 469, 1159, 1307, 1312
PleI	GAGTC	2 cut(s)	383, 1136
PluTI	GGCGCC	2 cut(s)	171, 1311
PpsI	GAGTC	2 cut(s)	383, 1136
PpuMI	RGGWCCY	1 cut(s)	410
PscI	ACATGT	1 cut(s)	1067
Psp124BI	GAGCTC	1 cut(s)	70
Psp5II	RGGWCCY	1 cut(s)	410
Psp6I	CCWGG	7 cut(s)	51, 104, 383, 1008, 1329, 1459, 1626
PspGI	CCWGG	7 cut(s)	51, 104, 383, 1008, 1329, 1459, 1626
PspN4I	GGNNCC	7 cut(s)	58, 169, 708, 946, 1309, 1465, 1485
PspPI	GGNCC	5 cut(s)	157, 410, 678, 1187, 1694
PspPPI	RGGWCCY	1 cut(s)	410
PstI	CTGCAG	1 cut(s)	328
RsaI	GTAC	1 cut(s)	643
RsaNI	GTAC	1 cut(s)	642
RseI	CAYNNNNRTG	1 cut(s)	809
SacI	GAGCTC	1 cut(s)	70
SapI	GCTCTTC	3 cut(s)	116, 893, 1432
SaqAI	TTAA	3 cut(s)	252, 426, 984
SatI	GCNGC	5 cut(s)	465, 468, 1158, 1306, 1311
Sau3AI	GATC	6 cut(s)	306, 715, 1087, 1285, 1567, 1761
Sau96I	GGNCC	5 cut(s)	157, 410, 678, 1187, 1694
ScaI	AGTACT	1 cut(s)	643
SchI	GAGTC	2 cut(s)	383, 1137
SduI	GDGCHC	8 cut(s)	59, 70, 344, 532, 599, 613, 836, 1121
SexAI	ACCWGGT	1 cut(s)	1329
SfaNI	GCATC	5 cut(s)	433, 791, 985, 1006, 1686
SfcI	CTRYAG	2 cut(s)	324, 906
SfoI	GGCGCC	2 cut(s)	169, 1309
SfuI	TTCGAA	1 cut(s)	1077
SinI	GGWCC	3 cut(s)	410, 678, 1694
SmaI	CCCGGG	1 cut(s)	1122
SmiMI	CAYNNNNRTG	1 cut(s)	809
SmlI	CTYRAG	2 cut(s)	1294, 1664
SmoI	CTYRAG	2 cut(s)	1294, 1664
SpeI	ACTAGT	1 cut(s)	1603
SrfI	GCCCGGGC	1 cut(s)	1122
Sse9I	AATT	5 cut(s)	283, 428, 579, 1205, 1782
SsiI	CCGC	7 cut(s)	181, 681, 918, 958, 1305, 1311, 1685
SspDI	GGCGCC	2 cut(s)	167, 1307
SspMI	CTAG	6 cut(s)	63, 414, 447, 456, 1275, 1604
SstI	GAGCTC	1 cut(s)	70
StyI	CCWWGG	4 cut(s)	403, 546, 674, 816
TaaI	ACNGT	9 cut(s)	121, 133, 212, 898, 1105, 1171, 1371, 1510, 1619
TaiI	ACGT	2 cut(s)	306, 497
TasI	AATT	5 cut(s)	283, 428, 579, 1205, 1782
TatI	WGTACW	1 cut(s)	641
TauI	GCSGC	2 cut(s)	1308, 1313
TfiI	GAWTC	7 cut(s)	297, 522, 931, 1074, 1598, 1735, 1753
Tru1I	TTAA	3 cut(s)	252, 426, 984
Tru9I	TTAA	3 cut(s)	252, 426, 984
TscAI	CASTG	4 cut(s)	532, 1174, 1376, 1624
TseFI	GTSAC	4 cut(s)	570, 1373, 1469, 1651
TseI	GCWGC	3 cut(s)	464, 467, 1157
Tsp45I	GTSAC	4 cut(s)	570, 1373, 1469, 1651
TspDTI	ATGAA	4 cut(s)	7, 639, 799, 1630
TspMI	CCCGGG	1 cut(s)	1120
TspRI	CASTG	4 cut(s)	532, 1174, 1376, 1624
VneI	GTGCAC	1 cut(s)	595
VpaK11BI	GGWCC	3 cut(s)	410, 678, 1694
XapI	RAATTY	2 cut(s)	283, 1782
XceI	RCATGY	1 cut(s)	1071
XcmI	CCANNNNNNNNNTGG	1 cut(s)	550
XmaI	CCCGGG	1 cut(s)	1120
XspI	CTAG	6 cut(s)	63, 414, 447, 456, 1275, 1604
ZrmI	AGTACT	1 cut(s)	643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.