Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007679

Physical Location & Seq

Genomic Coordinates Forward (+)

27033114 .. 27034105

Gene Structure 992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G260900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 771 bp

ATGGGTGTGCAGGGATGTGATGCGTCGTTGCTGCTGGATAATGCACCAAACTTCATTGGAGAGAAAAATATACCTCCCAATAAGAATTCTACGAGGGGGTATGAAGTGATTGATGAAATCAAGTCTGCGGTGGAGAAAAAGTGCCCTGGCGTCGTCTCATGTGCTGATATTATTGCCATTGTTGCCAGAGACTCTGTTTCAATTCTTGGAGGACCAAGTTGGGGTGTTCAATTGGGAAGGAGAGACGCTAGGGCTACGAACGCGATCGTTACTAATGTCAGCTTACCCCTTCCGAAAGCCAATTTAAAGGAGCTCGTCCTTAGATTCCGTGGTATTGCGCTTAAAAGGAGAGACTTGGTTGCTTTAGTAGGAGCTCATACACCTGGAGAAGCACAATGTCACTCCTTCAGAGAGCGCATATACAATGAGAGCAACATGAACAAAGAGCTTGCCCAGAAAAGGAGATTAAAATGCCCAAGATCACAAGGCTCGGGTGACGCCAACTTGGCTCCAATTGATGCTCAAACCCCAATAGTGTTTGACAACAGCTACTACAAAAACCTTGTCCAGAATAAAGGGCTCCTCCACTCTGATCAGCAGCTCTTCAGTGGAGGCAAAACTGATCCCATAGTGCGCACCTACAGTAAAGACCAAGAAGCCTTCTTTAACGACTTTGCGTCTGCCATGATCAAGATGGGAAGCGTCAACCCCCTCATTGGTCCAGCTGGCGAGATCAGGTTGAATTGCAGGAGGATGAATCCAATAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

257

Amino Acids

27.99

Weight (kDa)

9.35

Isoelectric Point (pI)

36.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05340
fragaria_vesca	FvH4_7g25570 FvH4_7g25571
malus_domestica	MD01G1162700.v1.1 MD07G1230700.v1.1 MD07G1230900.v1.1
prunus_persica	Prupe.2G260800_v2.0.a1 Prupe.2G260900_v2.0.a1
pyrus_communis	pycom01g17760 pycom07g20830
rosa_chinensis	RchiOBHm_Chr1g0371621 RchiOBHm_Chr1g0371631
rosa_laevigata	RLG00000026950 RLG00000026951
rosa_multiflora	Rmu_sc0000809.1_g000001 Rmu_sc0001916.1_g000015 Rmu_sc0040538.1_g000001
rosa_roxburghii	Rroxscaffold_4G00285530
rosa_rugosa	Rorug01G0365400
rosa_samantha	Rh1AG375500 Rh1CG352100 Rh1DG370000
rosa_wichuraiana	Rw1G033030 Rw1G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	635
AccII	CGCG	1 cut(s)	263
AciI	CCGC	1 cut(s)	128
AclWI	GGATC	1 cut(s)	617
AcsI	RAATTY	1 cut(s)	85
AcuI	CTGAAG	2 cut(s)	391, 589
AcyI	GRCGYC	2 cut(s)	150, 498
AfiI	CCNNNNNNNGG	3 cut(s)	221, 459, 716
AgsI	TTSAA	3 cut(s)	201, 230, 742
AhdI	GACNNNNNGTC	1 cut(s)	676
AjnI	CCWGG	2 cut(s)	145, 382
AluBI	AGCT	7 cut(s)	282, 313, 374, 448, 549, 601, 725
AluI	AGCT	7 cut(s)	282, 313, 374, 448, 549, 601, 725
Alw21I	GWGCWC	2 cut(s)	315, 376
Alw26I	GTCTC	4 cut(s)	160, 183, 237, 345
AlwI	GGATC	1 cut(s)	617
Ama87I	CYCGRG	1 cut(s)	490
ApeKI	GCWGC	2 cut(s)	31, 598
ApoI	RAATTY	1 cut(s)	85
ArsI	GACNNNNNNTTYG	2 cut(s)	549, 581
AspLEI	GCGC	3 cut(s)	340, 417, 636
AspS9I	GGNCC	2 cut(s)	212, 719
AsuHPI	GGTGA	1 cut(s)	506
AvaI	CYCGRG	1 cut(s)	490
AvaII	GGWCC	2 cut(s)	212, 719
BaeGI	GKGCMC	1 cut(s)	146
BanII	GRGCYC	3 cut(s)	315, 376, 582
Bbv12I	GWGCWC	2 cut(s)	315, 376
BbvI	GCAGC	2 cut(s)	18, 610
BccI	CCATC	1 cut(s)	688
BciT130I	CCWGG	2 cut(s)	147, 384
BclI	TGATCA	2 cut(s)	592, 687
BcoDI	GTCTC	4 cut(s)	160, 183, 237, 345
BfaI	CTAG	1 cut(s)	249
BfmI	CTRYAG	1 cut(s)	640
BglI	GCCNNNNNGGC	1 cut(s)	506
BisI	GCNGC	2 cut(s)	32, 599
BlsI	GCNGC	2 cut(s)	33, 600
Bme1390I	CCNGG	2 cut(s)	147, 384
Bme18I	GGWCC	2 cut(s)	212, 719
BmeRI	GACNNNNNGTC	1 cut(s)	676
BmeT110I	CYCGRG	1 cut(s)	490
BmgT120I	GGNCC	2 cut(s)	212, 719
BmiI	GGNNCC	2 cut(s)	510, 581
BmrFI	CCNGG	2 cut(s)	147, 384
BmsI	GCATC	2 cut(s)	10, 508
BpmI	CTGGAG	1 cut(s)	405
BsaHI	GRCGYC	2 cut(s)	150, 498
BsaJI	CCNNGG	2 cut(s)	145, 328
BsaXI	ACNNNNNCTCC	2 cut(s)	125, 155
Bsc4I	CCNNNNNNNGG	3 cut(s)	221, 459, 716
BseBI	CCWGG	2 cut(s)	147, 384
BseDI	CCNNGG	2 cut(s)	145, 328
BseGI	GGATG	2 cut(s)	20, 759
BseLI	CCNNNNNNNGG	3 cut(s)	221, 459, 716
BseRI	GAGGAG	1 cut(s)	572
BseSI	GKGCMC	1 cut(s)	146
BseXI	GCAGC	2 cut(s)	18, 610
BsgI	GTGCAG	1 cut(s)	29
Bsh1236I	CGCG	1 cut(s)	263
Bsh1285I	CGRYCG	1 cut(s)	267
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	2 cut(s)	315, 376
BsiHKCI	CYCGRG	1 cut(s)	490
BslI	CCNNNNNNNGG	3 cut(s)	221, 459, 716
BsmAI	GTCTC	4 cut(s)	160, 183, 237, 345
BsmBI	CGTCTC	2 cut(s)	160, 237
BsoBI	CYCGRG	1 cut(s)	490
Bsp1286I	GDGCHC	4 cut(s)	146, 315, 376, 582
Bsp143I	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
BspACI	CCGC	1 cut(s)	128
BspFNI	CGCG	1 cut(s)	263
BspLI	GGNNCC	2 cut(s)	510, 581
BspPI	GGATC	1 cut(s)	617
BspQI	GCTCTTC	1 cut(s)	608
BssECI	CCNNGG	2 cut(s)	145, 328
BssMI	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
BssNI	GRCGYC	2 cut(s)	150, 498
Bst2UI	CCWGG	2 cut(s)	147, 384
Bst4CI	ACNGT	1 cut(s)	644
Bst6I	CTCTTC	1 cut(s)	608
BstACI	GRCGYC	2 cut(s)	150, 498
BstC8I	GCNNGC	2 cut(s)	450, 727
BstDEI	CTNAG	1 cut(s)	320
BstDSI	CCRYGG	1 cut(s)	328
BstF5I	GGATG	2 cut(s)	20, 759
BstFNI	CGCG	1 cut(s)	263
BstHHI	GCGC	3 cut(s)	340, 417, 636
BstKTI	GATC	6 cut(s)	267, 482, 595, 625, 690, 735
BstMAI	GTCTC	4 cut(s)	160, 183, 237, 345
BstMBI	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
BstMCI	CGRYCG	1 cut(s)	267
BstMWI	GCNNNNNNNGC	3 cut(s)	182, 260, 506
BstNI	CCWGG	2 cut(s)	147, 384
BstSCI	CCNGG	2 cut(s)	145, 382
BstSFI	CTRYAG	1 cut(s)	640
BstSLI	GKGCMC	1 cut(s)	146
BstUI	CGCG	1 cut(s)	263
BstV1I	GCAGC	2 cut(s)	18, 610
BtgI	CCRYGG	1 cut(s)	328
BtsCI	GGATG	2 cut(s)	20, 759
BtsIMutI	CAGTG	1 cut(s)	613
Cac8I	GCNNGC	2 cut(s)	450, 727
CfoI	GCGC	3 cut(s)	340, 417, 636
Cfr13I	GGNCC	2 cut(s)	212, 719
CseI	GACGC	6 cut(s)	12, 139, 254, 506, 666, 691
CviAII	CATG	3 cut(s)	159, 436, 685
DdeI	CTNAG	1 cut(s)	320
DpnI	GATC	6 cut(s)	266, 481, 594, 624, 689, 734
DpnII	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
DraI	TTTAAA	1 cut(s)	306
DriI	GACNNNNNGTC	1 cut(s)	676
Eam1104I	CTCTTC	1 cut(s)	608
Eam1105I	GACNNNNNGTC	1 cut(s)	676
EarI	CTCTTC	1 cut(s)	608
Ecl136II	GAGCTC	2 cut(s)	313, 374
Eco24I	GRGCYC	3 cut(s)	315, 376, 582
Eco47I	GGWCC	2 cut(s)	212, 719
Eco53kI	GAGCTC	2 cut(s)	313, 374
Eco57I	CTGAAG	2 cut(s)	391, 589
Eco88I	CYCGRG	1 cut(s)	490
EcoICRI	GAGCTC	2 cut(s)	313, 374
EcoRI	GAATTC	1 cut(s)	85
EcoRII	CCWGG	2 cut(s)	145, 382
EcoT38I	GRGCYC	3 cut(s)	315, 376, 582
Esp3I	CGTCTC	2 cut(s)	160, 237
FaeI	CATG	3 cut(s)	162, 439, 688
FaiI	YATR	9 cut(s)	71, 102, 160, 378, 419, 421, 437, 629, 686
FatI	CATG	3 cut(s)	158, 435, 684
FbaI	TGATCA	2 cut(s)	592, 687
Fnu4HI	GCNGC	2 cut(s)	32, 599
FokI	GGATG	2 cut(s)	27, 766
FriOI	GRGCYC	3 cut(s)	315, 376, 582
Fsp4HI	GCNGC	2 cut(s)	32, 599
FspAI	RTGCGCAY	1 cut(s)	635
FspBI	CTAG	1 cut(s)	249
FspI	TGCGCA	1 cut(s)	635
GlaI	GCGC	3 cut(s)	339, 416, 635
GluI	GCNGC	2 cut(s)	32, 599
GsuI	CTGGAG	1 cut(s)	405
HgaI	GACGC	6 cut(s)	12, 139, 254, 506, 666, 691
HhaI	GCGC	3 cut(s)	340, 417, 636
Hin1I	GRCGYC	2 cut(s)	150, 498
Hin1II	CATG	3 cut(s)	162, 439, 688
Hin6I	GCGC	3 cut(s)	338, 415, 634
HinP1I	GCGC	3 cut(s)	338, 415, 634
HincII	GTYRAC	1 cut(s)	706
HindII	GTYRAC	1 cut(s)	706
HinfI	GANTC	3 cut(s)	191, 324, 757
HphI	GGTGA	1 cut(s)	506
Hpy166II	GTNNAC	1 cut(s)	706
Hpy188I	TCNGA	3 cut(s)	294, 410, 592
Hpy188III	TCNNGA	2 cut(s)	568, 691
Hpy8I	GTNNAC	1 cut(s)	706
Hpy99I	CGWCG	2 cut(s)	28, 155
HpyAV	CCTTC	4 cut(s)	231, 299, 415, 670
HpyCH4III	ACNGT	1 cut(s)	644
HpyCH4V	TGCA	3 cut(s)	10, 44, 747
HpyF10VI	GCNNNNNNNGC	3 cut(s)	182, 260, 506
HpyF3I	CTNAG	1 cut(s)	320
Hsp92I	GRCGYC	2 cut(s)	150, 498
Hsp92II	CATG	3 cut(s)	162, 439, 688
HspAI	GCGC	3 cut(s)	338, 415, 634
Ksp22I	TGATCA	2 cut(s)	592, 687
Kzo9I	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
LguI	GCTCTTC	1 cut(s)	608
LmnI	GCTCC	4 cut(s)	310, 371, 514, 585
Lsp1109I	GCAGC	2 cut(s)	18, 610
LweI	GCATC	2 cut(s)	10, 508
MaeI	CTAG	1 cut(s)	249
MaeIII	GTNAC	3 cut(s)	268, 398, 494
MalI	GATC	6 cut(s)	266, 481, 594, 624, 689, 734
MboI	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
MboII	GAAGA	1 cut(s)	595
MfeI	CAATTG	2 cut(s)	230, 513
MhlI	GDGCHC	4 cut(s)	146, 315, 376, 582
MluCI	AATT	7 cut(s)	85, 201, 230, 301, 513, 742, 765
MlyI	GAGTC	1 cut(s)	185
MnlI	CCTC	7 cut(s)	84, 87, 203, 593, 605, 722, 744
MseI	TTAA	5 cut(s)	305, 342, 467, 666, 769
MspA1I	CMGCKG	1 cut(s)	725
MspR9I	CCNGG	2 cut(s)	147, 384
MunI	CAATTG	2 cut(s)	230, 513
MvaI	CCWGG	2 cut(s)	147, 384
MvnI	CGCG	1 cut(s)	263
MwoI	GCNNNNNNNGC	3 cut(s)	182, 260, 506
NdeII	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
NlaIII	CATG	3 cut(s)	162, 439, 688
NlaIV	GGNNCC	2 cut(s)	510, 581
NmuCI	GTSAC	2 cut(s)	398, 494
NsbI	TGCGCA	1 cut(s)	635
PciSI	GCTCTTC	1 cut(s)	608
PfeI	GAWTC	2 cut(s)	324, 757
PkrI	GCNGC	2 cut(s)	33, 600
Ple19I	CGATCG	1 cut(s)	267
PleI	GAGTC	1 cut(s)	185
PpsI	GAGTC	1 cut(s)	185
Psp124BI	GAGCTC	2 cut(s)	315, 376
Psp6I	CCWGG	2 cut(s)	145, 382
PspGI	CCWGG	2 cut(s)	145, 382
PspN4I	GGNNCC	2 cut(s)	510, 581
PspPI	GGNCC	2 cut(s)	212, 719
PvuI	CGATCG	1 cut(s)	267
PvuII	CAGCTG	1 cut(s)	725
SacI	GAGCTC	2 cut(s)	315, 376
SapI	GCTCTTC	1 cut(s)	608
SaqAI	TTAA	5 cut(s)	305, 342, 467, 666, 769
SatI	GCNGC	2 cut(s)	32, 599
Sau3AI	GATC	6 cut(s)	264, 479, 592, 622, 687, 732
Sau96I	GGNCC	2 cut(s)	212, 719
SchI	GAGTC	1 cut(s)	185
ScrFI	CCNGG	2 cut(s)	147, 384
SduI	GDGCHC	4 cut(s)	146, 315, 376, 582
SfaNI	GCATC	2 cut(s)	10, 508
SfcI	CTRYAG	1 cut(s)	640
SinI	GGWCC	2 cut(s)	212, 719
Sse9I	AATT	7 cut(s)	85, 201, 230, 301, 513, 742, 765
SsiI	CCGC	1 cut(s)	128
SspMI	CTAG	1 cut(s)	249
SstI	GAGCTC	2 cut(s)	315, 376
StyD4I	CCNGG	2 cut(s)	145, 382
TaaI	ACNGT	1 cut(s)	644
TasI	AATT	7 cut(s)	85, 201, 230, 301, 513, 742, 765
TfiI	GAWTC	2 cut(s)	324, 757
Tru1I	TTAA	5 cut(s)	305, 342, 467, 666, 769
Tru9I	TTAA	5 cut(s)	305, 342, 467, 666, 769
TscAI	CASTG	1 cut(s)	613
TseFI	GTSAC	2 cut(s)	398, 494
TseI	GCWGC	2 cut(s)	31, 598
Tsp45I	GTSAC	2 cut(s)	398, 494
TspDTI	ATGAA	5 cut(s)	43, 117, 129, 452, 770
TspGWI	ACGGA	1 cut(s)	317
TspRI	CASTG	1 cut(s)	613
VpaK11BI	GGWCC	2 cut(s)	212, 719
XapI	RAATTY	1 cut(s)	85
XcmI	CCANNNNNNNNNTGG	1 cut(s)	691
XspI	CTAG	1 cut(s)	249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.