Prupe.2G262800_v2.0.a1

alpha-galactosidase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
27119898 .. 27125273
5376 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G262800.1

Sequence Viewer

Length: 1398 bp
ATGCTCTGTTCCTTCCCATTCACAGACTCATCTCAGTGTTTTAAGAAAAGCCAAAAAGGAAACACACAGAAAACAAAAACGGAGCATTCAATAATGGCGAAGAGGAAGATCACCCTATCTTTGTATACTCTGGTTCTCACTCTATCGGCGGTCTCTTTGGCATTTGCAGTCAGAGTAGTGCCTCTCACGCAACCCCATGAGAAACCGACTTTTCTAAGACCAACATTCAATCGCATTTTTGATACTTCCTTATATGGGATTTTGCAACTTAACAACGGTTTGGCCCAAACGCCTCAGATGGGGTGGAACAGCTGGAATTTCTTTGCCTGCAATATCAATGAAACCGTGATCAAGGAAACTGCTGATGCACTCATCTCAACTGGCTTAGCAGATTTAGGCTATGTGTATGTCAATATAGATGATTGCTGGTGTCAAACACGAAATTCGGAGGGTCAACTGGTCCCTGATCCTAAAACATTTCCGTCAGGAATTAAAGCTCTTGCCGAGTATTTACACAGAAAAGGACTCAAGCTTGGAATTTATTCTGATGCTGGGGTTTTTACGTGTCAAGTTCGACCAGGATCACTTTATCATGAAAATGATGATGCAAAGCTGTTTGCTTCTTGGGATGTGGACTATTTGAAATATGACAACTGTTACAATCTGGGCATCCCGCCAAAAGAACGATACCCCCCAATGCGCGAGGCCCTAAATGCATCTGGACGCACAATTTTCTATTCAATCTGTGAATGGGGTGTTGACGACCCAGCTTTATGGGCGGGCAAGCTTGGAAATAGTTGGCGTACAACTGATGATATCAATGATTCTTGGGCAAGCATGACAACAATTGCTGATTTGAATGACAAGTGGGCGGCGTATGCAGGACCTGGTGGATGGAATGATCCTGATATGTTGGAAGTTGGCAATGGAGGCATGAGTTATCAGGAGTACCGTGCTCATTTTAGCATCTGGGCTTTGATGAAGGCCCCTCTTTTGGTTGGTTGCGATGTAAGAAACATGACTGCAGAAACATTCGAGATTCTAAGCAACGAGGAGGTTATTGCTGTAAACCAAGATCCACTTGGAGTTCAGGGAAGGAAAGTTAGTGTTTCTGGAACAGATGGTTGCTATCAGGTCTGGGCAGGTCCTCTATCCGGACATCGGCTGACCGTTGCTCTTTGGAATCGGTGCTCAAAAGCAAAGACTATAACAGTTACTTGGGAAGCACTTGGACTCCAATCCAGCATTAGCGTCTCCATAAGAGATTTGTGGGAGCACAAAGAAGTAGCAGTTGATACTGTATCGTCGTTCGGTGCTCGAGTTGATGCTCATGACTGCCGGATGTACATTTTTACTCCCCAGACTCCCGCTCAGAAATATAGCTTAGCCTTTACTTAA

Protein Analysis

466

Amino Acids

51.88

Weight (kDa)

5.95

Isoelectric Point (pI)

24.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1133
AccBSI CCGCTC 1 cut(s) 1370
AccI GTMKAC 1 cut(s) 125
AccII CGCG 1 cut(s) 702
AccIII TCCGGA 1 cut(s) 1154
AciI CCGC 5 cut(s) 149, 674, 779, 872, 1368
AclWI GGATC 4 cut(s) 461, 589, 896, 1070
AcsI RAATTY 3 cut(s) 316, 442, 537
AfaI GTAC 3 cut(s) 805, 950, 1346
AfiI CCNNNNNNNGG 5 cut(s) 255, 299, 994, 1154, 1161
AflIII ACRYGT 1 cut(s) 563
AgsI TTSAA 5 cut(s) 90, 229, 643, 741, 859
AjnI CCWGG 2 cut(s) 577, 886
AluBI AGCT 7 cut(s) 312, 497, 532, 613, 770, 787, 1383
AluI AGCT 7 cut(s) 312, 497, 532, 613, 770, 787, 1383
Alw21I GWGCWC 4 cut(s) 958, 1193, 1278, 1318
Alw26I GTCTC 2 cut(s) 157, 1258
AlwI GGATC 4 cut(s) 461, 589, 896, 1070
AlwNI CAGNNNCTG 1 cut(s) 887
Ama87I CYCGRG 1 cut(s) 1317
Aor13HI TCCGGA 1 cut(s) 1154
AoxI GGCC 3 cut(s) 282, 705, 984
ApoI RAATTY 3 cut(s) 316, 442, 537
Asp700I GAANNNNTTC 1 cut(s) 541
AspLEI GCGC 1 cut(s) 702
AspS9I GGNCC 6 cut(s) 283, 460, 706, 884, 985, 1145
AsuHPI GGTGA 1 cut(s) 103
AvaI CYCGRG 1 cut(s) 1317
AvaII GGWCC 3 cut(s) 460, 884, 1145
Bbv12I GWGCWC 4 cut(s) 958, 1193, 1278, 1318
BccI CCATC 3 cut(s) 292, 888, 1115
BciT130I CCWGG 2 cut(s) 579, 888
BclI TGATCA 1 cut(s) 348
BcoDI GTCTC 2 cut(s) 157, 1258
BfmI CTRYAG 1 cut(s) 1023
BfuAI ACCTGC 1 cut(s) 1133
BisI GCNGC 1 cut(s) 873
BlpI GCTNAGC 2 cut(s) 385, 1384
BlsI GCNGC 1 cut(s) 874
Bme1390I CCNGG 2 cut(s) 579, 888
Bme18I GGWCC 3 cut(s) 460, 884, 1145
BmeT110I CYCGRG 1 cut(s) 1317
BmgT120I GGNCC 6 cut(s) 283, 460, 706, 884, 985, 1145
BmiI GGNNCC 2 cut(s) 462, 987
BmrFI CCNGG 2 cut(s) 579, 888
BmsI GCATC 7 cut(s) 355, 538, 595, 678, 725, 975, 1315
Bpu1102I GCTNAGC 2 cut(s) 385, 1384
BpuEI CTTGAG 1 cut(s) 512
BsaAI YACGTR 1 cut(s) 564
BsaI GGTCTC 1 cut(s) 157
BsaWI WCCGGW 1 cut(s) 1154
BsaXI ACNNNNNCTCC 2 cut(s) 1218, 1248
Bsc4I CCNNNNNNNGG 5 cut(s) 255, 299, 994, 1154, 1161
Bse1I ACTGG 2 cut(s) 385, 462
Bse3DI GCAATG 1 cut(s) 931
BseAI TCCGGA 1 cut(s) 1154
BseBI CCWGG 2 cut(s) 579, 888
BseGI GGATG 4 cut(s) 634, 669, 899, 1347
BseLI CCNNNNNNNGG 5 cut(s) 255, 299, 994, 1154, 1161
BseMI GCAATG 1 cut(s) 931
BseMII CTCAG 3 cut(s) 47, 308, 1385
BseNI ACTGG 2 cut(s) 385, 462
BseRI GAGGAG 1 cut(s) 1067
BseYI CCCAGC 2 cut(s) 551, 766
Bsh1236I CGCG 1 cut(s) 702
BshFI GGCC 3 cut(s) 284, 707, 986
BsiHKAI GWGCWC 4 cut(s) 958, 1193, 1278, 1318
BsiHKCI CYCGRG 1 cut(s) 1317
BsiSI CCGG 2 cut(s) 1155, 1339
BslFI GGGAC 1 cut(s) 446
BslI CCNNNNNNNGG 5 cut(s) 255, 299, 994, 1154, 1161
BsmAI GTCTC 2 cut(s) 157, 1258
BsmBI CGTCTC 1 cut(s) 1258
BsmFI GGGAC 1 cut(s) 446
BsmI GAATGC 1 cut(s) 85
BsnI GGCC 3 cut(s) 284, 707, 986
Bso31I GGTCTC 1 cut(s) 157
BsoBI CYCGRG 1 cut(s) 1317
Bsp1286I GDGCHC 4 cut(s) 958, 1193, 1278, 1318
Bsp13I TCCGGA 1 cut(s) 1154
Bsp1407I TGTACA 1 cut(s) 1344
Bsp143I GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
Bsp1720I GCTNAGC 2 cut(s) 385, 1384
BspACI CCGC 5 cut(s) 149, 674, 779, 872, 1368
BspANI GGCC 3 cut(s) 284, 707, 986
BspCNI CTCAG 3 cut(s) 46, 307, 1384
BspEI TCCGGA 1 cut(s) 1154
BspFNI CGCG 1 cut(s) 702
BspHI TCATGA 2 cut(s) 592, 1330
BspLI GGNNCC 2 cut(s) 462, 987
BspMAI CTGCAG 1 cut(s) 1027
BspMI ACCTGC 1 cut(s) 1133
BspPI GGATC 4 cut(s) 461, 589, 896, 1070
BspTNI GGTCTC 1 cut(s) 157
BsrBI CCGCTC 1 cut(s) 1370
BsrDI GCAATG 1 cut(s) 931
BsrGI TGTACA 1 cut(s) 1344
BsrI ACTGG 2 cut(s) 385, 462
BssMI GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
BssNAI GTATAC 1 cut(s) 126
Bst1107I GTATAC 1 cut(s) 126
Bst2UI CCWGG 2 cut(s) 579, 888
Bst4CI ACNGT 7 cut(s) 278, 346, 656, 953, 1171, 1213, 1300
Bst6I CTCTTC 1 cut(s) 95
BstAUI TGTACA 1 cut(s) 1344
BstBAI YACGTR 1 cut(s) 564
BstC8I GCNNGC 4 cut(s) 328, 781, 785, 835
BstDEI CTNAG 7 cut(s) 33, 215, 294, 385, 1043, 1371, 1384
BstF5I GGATG 4 cut(s) 634, 669, 899, 1347
BstFNI CGCG 1 cut(s) 702
BstHHI GCGC 1 cut(s) 702
BstKTI GATC 6 cut(s) 111, 351, 469, 584, 904, 1078
BstMAI GTCTC 2 cut(s) 157, 1258
BstMBI GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
BstMWI GCNNNNNNNGC 5 cut(s) 187, 713, 776, 878, 930
BstNI CCWGG 2 cut(s) 579, 888
BstSCI CCNGG 2 cut(s) 577, 886
BstSFI CTRYAG 1 cut(s) 1023
BstUI CGCG 1 cut(s) 702
BstX2I RGATCY 1 cut(s) 1075
BstXI CCANNNNNNTGG 1 cut(s) 774
BstYI RGATCY 1 cut(s) 1075
BstZ17I GTATAC 1 cut(s) 126
BsuRI GGCC 3 cut(s) 284, 707, 986
BtgZI GCGATG 1 cut(s) 1020
BtsCI GGATG 4 cut(s) 634, 669, 899, 1347
BtsIMutI CAGTG 1 cut(s) 41
BveI ACCTGC 1 cut(s) 1133
Cac8I GCNNGC 4 cut(s) 328, 781, 785, 835
CaiI CAGNNNCTG 1 cut(s) 887
CciI TCATGA 2 cut(s) 592, 1330
CfoI GCGC 1 cut(s) 702
Cfr13I GGNCC 6 cut(s) 283, 460, 706, 884, 985, 1145
CseI GACGC 2 cut(s) 732, 1240
CsiI ACCWGGT 1 cut(s) 886
Csp6I GTAC 3 cut(s) 804, 949, 1345
CviAII CATG 6 cut(s) 197, 593, 838, 934, 1018, 1331
CviQI GTAC 3 cut(s) 804, 949, 1345
DdeI CTNAG 7 cut(s) 33, 215, 294, 385, 1043, 1371, 1384
DpnI GATC 6 cut(s) 110, 350, 468, 583, 903, 1077
DpnII GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
Eco31I GGTCTC 1 cut(s) 157
Eco32I GATATC 1 cut(s) 817
Eco47I GGWCC 3 cut(s) 460, 884, 1145
Eco88I CYCGRG 1 cut(s) 1317
EcoO109I RGGNCCY 4 cut(s) 706, 884, 985, 1145
EcoRII CCWGG 2 cut(s) 577, 886
EcoRV GATATC 1 cut(s) 817
EcoT22I ATGCAT 1 cut(s) 718
Esp3I CGTCTC 1 cut(s) 1258
FaeI CATG 6 cut(s) 200, 596, 841, 937, 1021, 1334
FalI AAGNNNNNCTT 2 cut(s) 1065, 1097
FaqI GGGAC 1 cut(s) 446
FatI CATG 6 cut(s) 196, 592, 837, 933, 1017, 1330
FauI CCCGC 3 cut(s) 681, 772, 1375
FbaI TGATCA 1 cut(s) 348
FblI GTMKAC 1 cut(s) 125
Fnu4HI GCNGC 1 cut(s) 873
FokI GGATG 4 cut(s) 641, 656, 906, 1354
Fsp4HI GCNGC 1 cut(s) 873
GlaI GCGC 1 cut(s) 701
GluI GCNGC 1 cut(s) 873
GsaI CCCAGC 2 cut(s) 555, 770
HaeIII GGCC 3 cut(s) 284, 707, 986
HapII CCGG 2 cut(s) 1155, 1339
HgaI GACGC 2 cut(s) 732, 1240
HhaI GCGC 1 cut(s) 702
Hin1II CATG 6 cut(s) 200, 596, 841, 937, 1021, 1334
Hin6I GCGC 1 cut(s) 700
HinP1I GCGC 1 cut(s) 700
HincII GTYRAC 2 cut(s) 455, 760
HindII GTYRAC 2 cut(s) 455, 760
HindIII AAGCTT 2 cut(s) 530, 785
HinfI GANTC 7 cut(s) 26, 525, 824, 1039, 1183, 1233, 1363
HpaII CCGG 2 cut(s) 1155, 1339
HphI GGTGA 1 cut(s) 103
Hpy166II GTNNAC 5 cut(s) 126, 455, 634, 760, 1069
Hpy188I TCNGA 5 cut(s) 173, 297, 448, 547, 1374
Hpy188III TCNNGA 9 cut(s) 486, 593, 720, 905, 944, 1036, 1113, 1155, 1331
Hpy8I GTNNAC 5 cut(s) 126, 455, 634, 760, 1069
Hpy99I CGWCG 1 cut(s) 1309
HpyAV CCTTC 3 cut(s) 22, 976, 1089
HpyCH4III ACNGT 7 cut(s) 278, 346, 656, 953, 1171, 1213, 1300
HpyCH4IV ACGT 1 cut(s) 563
HpyCH4V TGCA 8 cut(s) 167, 265, 330, 368, 608, 716, 881, 1025
HpyF10VI GCNNNNNNNGC 5 cut(s) 187, 713, 776, 878, 930
HpyF3I CTNAG 7 cut(s) 33, 215, 294, 385, 1043, 1371, 1384
HpySE526I ACGT 1 cut(s) 563
Hsp92II CATG 6 cut(s) 200, 596, 841, 937, 1021, 1334
HspAI GCGC 1 cut(s) 700
Kpn2I TCCGGA 1 cut(s) 1154
Ksp22I TGATCA 1 cut(s) 348
Kzo9I GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
LmnI GCTCC 2 cut(s) 82, 1273
LweI GCATC 7 cut(s) 355, 538, 595, 678, 725, 975, 1315
MabI ACCWGGT 1 cut(s) 886
MaeII ACGT 1 cut(s) 563
MaeIII GTNAC 2 cut(s) 656, 1213
MalI GATC 6 cut(s) 110, 350, 468, 583, 903, 1077
MbiI CCGCTC 1 cut(s) 1370
MboI GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
MboII GAAGA 2 cut(s) 112, 118
MfeI CAATTG 1 cut(s) 846
MflI RGATCY 1 cut(s) 1075
MhlI GDGCHC 4 cut(s) 958, 1193, 1278, 1318
MluCI AATT 6 cut(s) 316, 442, 489, 537, 729, 846
MlyI GAGTC 4 cut(s) 20, 519, 1227, 1357
MmeI TCCRAC 1 cut(s) 894
Mph1103I ATGCAT 1 cut(s) 718
MroI TCCGGA 1 cut(s) 1154
MroXI GAANNNNTTC 1 cut(s) 541
MseI TTAA 4 cut(s) 42, 270, 492, 1396
MslI CAYNNNNRTG 2 cut(s) 34, 597
MspA1I CMGCKG 1 cut(s) 312
MspI CCGG 2 cut(s) 1155, 1339
MspR9I CCNGG 2 cut(s) 579, 888
MunI CAATTG 1 cut(s) 846
Mva1269I GAATGC 1 cut(s) 85
MvaI CCWGG 2 cut(s) 579, 888
MvnI CGCG 1 cut(s) 702
MwoI GCNNNNNNNGC 5 cut(s) 187, 713, 776, 878, 930
NdeII GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
NlaIII CATG 6 cut(s) 200, 596, 841, 937, 1021, 1334
NlaIV GGNNCC 2 cut(s) 462, 987
NmeAIII GCCGAG 1 cut(s) 529
NsiI ATGCAT 1 cut(s) 718
PaeR7I CTCGAG 1 cut(s) 1317
PagI TCATGA 2 cut(s) 592, 1330
PctI GAATGC 1 cut(s) 85
PdmI GAANNNNTTC 1 cut(s) 541
PfeI GAWTC 3 cut(s) 824, 1039, 1183
PkrI GCNGC 1 cut(s) 874
PleI GAGTC 4 cut(s) 20, 519, 1227, 1357
PpsI GAGTC 4 cut(s) 20, 519, 1227, 1357
Ppu21I YACGTR 1 cut(s) 564
PpuMI RGGWCCY 2 cut(s) 884, 1145
Psp5II RGGWCCY 2 cut(s) 884, 1145
Psp6I CCWGG 2 cut(s) 577, 886
PspFI CCCAGC 2 cut(s) 551, 766
PspGI CCWGG 2 cut(s) 577, 886
PspN4I GGNNCC 2 cut(s) 462, 987
PspPI GGNCC 6 cut(s) 283, 460, 706, 884, 985, 1145
PspPPI RGGWCCY 2 cut(s) 884, 1145
PspXI VCTCGAGB 1 cut(s) 1317
PstI CTGCAG 1 cut(s) 1027
PstNI CAGNNNCTG 1 cut(s) 887
PsuI RGATCY 1 cut(s) 1075
PvuII CAGCTG 1 cut(s) 312
RsaI GTAC 3 cut(s) 805, 950, 1346
RsaNI GTAC 3 cut(s) 804, 949, 1345
RseI CAYNNNNRTG 2 cut(s) 34, 597
SaqAI TTAA 4 cut(s) 42, 270, 492, 1396
SatI GCNGC 1 cut(s) 873
Sau3AI GATC 6 cut(s) 108, 348, 466, 581, 901, 1075
Sau96I GGNCC 6 cut(s) 283, 460, 706, 884, 985, 1145
SchI GAGTC 4 cut(s) 20, 519, 1227, 1357
ScrFI CCNGG 2 cut(s) 579, 888
SduI GDGCHC 4 cut(s) 958, 1193, 1278, 1318
SexAI ACCWGGT 1 cut(s) 886
SfaNI GCATC 7 cut(s) 355, 538, 595, 678, 725, 975, 1315
SfcI CTRYAG 1 cut(s) 1023
Sfr274I CTCGAG 1 cut(s) 1317
SinI GGWCC 3 cut(s) 460, 884, 1145
SlaI CTCGAG 1 cut(s) 1317
SmiMI CAYNNNNRTG 2 cut(s) 34, 597
SmlI CTYRAG 2 cut(s) 527, 1317
SmoI CTYRAG 2 cut(s) 527, 1317
Sse9I AATT 6 cut(s) 316, 442, 489, 537, 729, 846
SsiI CCGC 5 cut(s) 149, 674, 779, 872, 1368
StyD4I CCNGG 2 cut(s) 577, 886
TaaI ACNGT 7 cut(s) 278, 346, 656, 953, 1171, 1213, 1300
TaiI ACGT 1 cut(s) 566
TaqI TCGA 3 cut(s) 574, 1035, 1318
TasI AATT 6 cut(s) 316, 442, 489, 537, 729, 846
TatI WGTACW 1 cut(s) 1344
TauI GCSGC 1 cut(s) 875
TfiI GAWTC 3 cut(s) 824, 1039, 1183
Tru1I TTAA 4 cut(s) 42, 270, 492, 1396
Tru9I TTAA 4 cut(s) 42, 270, 492, 1396
TscAI CASTG 1 cut(s) 41
TspDTI ATGAA 3 cut(s) 354, 609, 995
TspGWI ACGGA 2 cut(s) 95, 471
TspRI CASTG 1 cut(s) 41
VpaK11BI GGWCC 3 cut(s) 460, 884, 1145
XapI RAATTY 3 cut(s) 316, 442, 537
XcmI CCANNNNNNNNNTGG 1 cut(s) 1079
XhoI CTCGAG 1 cut(s) 1317
XmiI GTMKAC 1 cut(s) 125
XmnI GAANNNNTTC 1 cut(s) 541
Zsp2I ATGCAT 1 cut(s) 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.