Rmu_sc0001755.1_g000035

alpha-galactosidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001755.1
Physical Location & Seq
Forward (+)
162008 .. 168430
6423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001755.1_g000035.1.cds

Sequence Viewer

Length: 1668 bp
atggcgaagagcaagatcatcagtttctctgtgttcactctgattctctgtctgtcagctctggctattgcaattgcaggcagagtagctgtgcctctgttgcaattccaggacaaacccagtttcctgagaccaacttttagtcgcatttacgatacttcaatgtatggtgctctgcaactcaataatggattggctcaaacgcctcaaatggggtggaatagctggaatttctttgcttgtgatattaatgaaaccgtgatcaaggaaacagctctggctattgcaactgcaggcagagtagctgtgcctctgttgcaattccaggacaaacccagtttcctgagaccaacttttagtcgcatttacgatacttcaatgtatggtgctctgcaactcaataatggattggctcaaacgcctcaaatggggtggaatagctggaatttctttgcttgtgatattaatgaaaccgtgatcaaggaaacagctgatgccctcatctccaccggattagctgatttaggttatgtgtatgtcaatatagatgattgctggtctttaccaacacgaaattctgagggtcaactggtccctgatcctaaaacatttccatcgggaattaaagctcttgccgattatatacatgggaagggcctcaagcttggaatatattctgatgccggggtttttacatgtcaagttcgaccaggttcaatttatcatgaaagtgatgacgccaagctgtttgcttcttgggacttagattacttgaagtatgacaactgttacaatctgggcatcccaccaaaagaacggtacccacccatgcgtgaggccctaaatacaactggacgcacgattttctattcaatttgtgaatggggtgttgatgatcctgctttatgggctgggaaagttgggaatagttggcgtacaacagatgatatcaatgatacgtgggcaagcatgactacaattgctgatttgaatgacaagtgggcatcatatgctggacctggtggatggaatgatccagatatgttggaagttggcaatggaggcatgagttaccaggaataccgtgctcattttagcatctgggctttgatgaaggcccctcttttgattggttgtgatgttagaaacatgactgcagaaacatacgaaattctgagcaatgaggaggttattgctataaaccaagattctcttggggttcaaggaaggaaagtgaatgtttcaggaacagatggggtctaccaggtttgggcgggtcctctgtctggacatcgtttggctgttgctctttggaatcggggttcaacagcaaagactataacagctgaatgggaagcacttggactgcaatccagcattagtgtctcagtgagagatttgtggcaggtttgggcgggtcctctatctggacatcgtttggctgttgctctttggaatcggggttcaacagcaaagactataacagctaaatgggaagcactgggactgcaatccagcattagtgtctcagtgagagatttgtggcagcacaaactagttaaggaggatgccgtatcatcatttggtgctctggttgaagctcatgactgtcacctgtacctcttcacccccaagactgagtcactaagtactttagccttcgcttaa

Protein Analysis

555

Amino Acids

61.24

Weight (kDa)

5.3

Isoelectric Point (pI)

29.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1396
Acc65I GGTACC 1 cut(s) 819
AccB1I GGYRCC 1 cut(s) 819
AccI GTMKAC 1 cut(s) 1260
AciI CCGC 2 cut(s) 1274, 1415
AclWI GGATC 3 cut(s) 593, 890, 1028
AcsI RAATTY 4 cut(s) 229, 445, 574, 1170
AcyI GRCGYC 1 cut(s) 738
AfaI GTAC 4 cut(s) 821, 937, 1619, 1651
AfiI CCNNNNNNNGG 5 cut(s) 212, 428, 1270, 1286, 1427
AflIII ACRYGT 1 cut(s) 695
AhlI ACTAGT 1 cut(s) 1555
AjnI CCWGG 6 cut(s) 108, 324, 709, 1018, 1074, 1263
AjuI GAANNNNNNNTTGG 2 cut(s) 559, 591
AloI GAACNNNNNNTCC 4 cut(s) 1306, 1338, 1447, 1479
Alw21I GWGCWC 4 cut(s) 175, 391, 1090, 1591
Alw26I GTCTC 4 cut(s) 124, 340, 1390, 1531
AlwI GGATC 3 cut(s) 593, 890, 1028
AoxI GGCC 3 cut(s) 655, 837, 1116
ApeKI GCWGC 1 cut(s) 1546
ApoI RAATTY 4 cut(s) 229, 445, 574, 1170
AseI ATTAAT 2 cut(s) 249, 465
Asp700I GAANNNNTTC 1 cut(s) 673
Asp718I GGTACC 1 cut(s) 819
AspS9I GGNCC 7 cut(s) 592, 655, 838, 1016, 1117, 1277, 1418
AsuC2I CCSGG 1 cut(s) 685
AsuHPI GGTGA 2 cut(s) 1604, 1618
AvaII GGWCC 4 cut(s) 592, 1016, 1277, 1418
BanI GGYRCC 1 cut(s) 819
Bbv12I GWGCWC 4 cut(s) 175, 391, 1090, 1591
BbvI GCAGC 1 cut(s) 1558
BccI CCATC 3 cut(s) 622, 1020, 1247
BceAI ACGGC 1 cut(s) 1556
BciT130I CCWGG 6 cut(s) 110, 326, 711, 1020, 1076, 1265
BclI TGATCA 2 cut(s) 261, 477
BcnI CCSGG 1 cut(s) 685
BcoDI GTCTC 4 cut(s) 124, 340, 1390, 1531
BcuI ACTAGT 1 cut(s) 1555
BfaI CTAG 1 cut(s) 1556
BfmI CTRYAG 2 cut(s) 291, 1155
BfuAI ACCTGC 1 cut(s) 1396
BisI GCNGC 1 cut(s) 1547
BlsI GCNGC 1 cut(s) 1548
BmcAI AGTACT 1 cut(s) 1651
Bme1390I CCNGG 7 cut(s) 110, 326, 685, 711, 1020, 1076, 1265
Bme18I GGWCC 4 cut(s) 592, 1016, 1277, 1418
BmgT120I GGNCC 7 cut(s) 592, 655, 838, 1016, 1117, 1277, 1418
BmiI GGNNCC 5 cut(s) 594, 821, 1119, 1278, 1419
BmrFI CCNGG 7 cut(s) 110, 326, 685, 711, 1020, 1076, 1265
BmrI ACTGGG 3 cut(s) 114, 330, 1511
BmsI GCATC 6 cut(s) 484, 670, 810, 1013, 1107, 1558
BmuI ACTGGG 3 cut(s) 114, 330, 1511
BpuEI CTTGAG 1 cut(s) 644
BpuMI CCSGG 1 cut(s) 685
BsaAI YACGTR 1 cut(s) 960
BsaHI GRCGYC 1 cut(s) 738
BsaI GGTCTC 2 cut(s) 124, 340
BsaJI CCNNGG 1 cut(s) 684
BsaWI WCCGGW 1 cut(s) 509
Bsc4I CCNNNNNNNGG 5 cut(s) 212, 428, 1270, 1286, 1427
Bse1I ACTGG 5 cut(s) 120, 336, 594, 856, 1506
Bse3DI GCAATG 2 cut(s) 1063, 1186
BseBI CCWGG 6 cut(s) 110, 326, 711, 1020, 1076, 1265
BseDI CCNNGG 1 cut(s) 684
BseGI GGATG 3 cut(s) 801, 1031, 1573
BseLI CCNNNNNNNGG 5 cut(s) 212, 428, 1270, 1286, 1427
BseMI GCAATG 2 cut(s) 1063, 1186
BseMII CTCAG 7 cut(s) 119, 335, 570, 1166, 1401, 1542, 1629
BseNI ACTGG 5 cut(s) 120, 336, 594, 856, 1506
BseRI GAGGAG 1 cut(s) 1199
BseXI GCAGC 1 cut(s) 1558
BseYI CCCAGC 1 cut(s) 911
BshFI GGCC 3 cut(s) 657, 839, 1118
BshNI GGYRCC 1 cut(s) 819
BsiHKAI GWGCWC 4 cut(s) 175, 391, 1090, 1591
BsiSI CCGG 2 cut(s) 510, 684
BslFI GGGAC 3 cut(s) 578, 773, 1518
BslI CCNNNNNNNGG 5 cut(s) 212, 428, 1270, 1286, 1427
BsmAI GTCTC 4 cut(s) 124, 340, 1390, 1531
BsmFI GGGAC 3 cut(s) 578, 773, 1518
BsnI GGCC 3 cut(s) 657, 839, 1118
Bso31I GGTCTC 2 cut(s) 124, 340
Bsp1286I GDGCHC 4 cut(s) 175, 391, 1090, 1591
Bsp143I GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
BspACI CCGC 2 cut(s) 1274, 1415
BspANI GGCC 3 cut(s) 657, 839, 1118
BspCNI CTCAG 7 cut(s) 120, 336, 571, 1167, 1400, 1541, 1630
BspHI TCATGA 2 cut(s) 724, 1603
BspLI GGNNCC 5 cut(s) 594, 821, 1119, 1278, 1419
BspMAI CTGCAG 2 cut(s) 295, 1159
BspMI ACCTGC 1 cut(s) 1396
BspPI GGATC 3 cut(s) 593, 890, 1028
BspQI GCTCTTC 1 cut(s) 2
BspT107I GGYRCC 1 cut(s) 819
BspTNI GGTCTC 2 cut(s) 124, 340
BsrDI GCAATG 2 cut(s) 1063, 1186
BsrI ACTGG 5 cut(s) 120, 336, 594, 856, 1506
BssECI CCNNGG 1 cut(s) 684
BssMI GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
BssNI GRCGYC 1 cut(s) 738
Bst2UI CCWGG 6 cut(s) 110, 326, 711, 1020, 1076, 1265
Bst4CI ACNGT 6 cut(s) 259, 475, 788, 819, 1085, 1610
Bst6I CTCTTC 2 cut(s) 2, 1628
BstACI GRCGYC 1 cut(s) 738
BstAPI GCANNNNNTGC 1 cut(s) 1010
BstBAI YACGTR 1 cut(s) 960
BstC8I GCNNGC 3 cut(s) 79, 295, 967
BstDEI CTNAG 9 cut(s) 128, 344, 579, 763, 1175, 1387, 1528, 1638, 1646
BstF5I GGATG 3 cut(s) 801, 1031, 1573
BstKTI GATC 6 cut(s) 18, 264, 480, 601, 898, 1036
BstMAI GTCTC 4 cut(s) 124, 340, 1390, 1531
BstMBI GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
BstMWI GCNNNNNNNGC 5 cut(s) 100, 316, 908, 1010, 1062
BstNI CCWGG 6 cut(s) 110, 326, 711, 1020, 1076, 1265
BstNSI RCATGY 1 cut(s) 699
BstSCI CCNGG 7 cut(s) 108, 324, 683, 709, 1018, 1074, 1263
BstSFI CTRYAG 2 cut(s) 291, 1155
BstV1I GCAGC 1 cut(s) 1558
BsuRI GGCC 3 cut(s) 657, 839, 1118
BtsCI GGATG 3 cut(s) 801, 1031, 1573
BtsIMutI CAGTG 3 cut(s) 1395, 1499, 1536
BveI ACCTGC 1 cut(s) 1396
Cac8I GCNNGC 3 cut(s) 79, 295, 967
CciI TCATGA 2 cut(s) 724, 1603
Cfr13I GGNCC 7 cut(s) 592, 655, 838, 1016, 1117, 1277, 1418
CseI GACGC 2 cut(s) 746, 864
CsiI ACCWGGT 3 cut(s) 709, 1018, 1263
Csp6I GTAC 4 cut(s) 820, 936, 1618, 1650
CspCI CAANNNNNGTGG 4 cut(s) 197, 232, 413, 448
CviAII CATG 8 cut(s) 647, 696, 725, 829, 970, 1066, 1150, 1604
CviQI GTAC 4 cut(s) 820, 936, 1618, 1650
DdeI CTNAG 9 cut(s) 128, 344, 579, 763, 1175, 1387, 1528, 1638, 1646
DpnI GATC 6 cut(s) 17, 263, 479, 600, 897, 1035
DpnII GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
Eam1104I CTCTTC 2 cut(s) 2, 1628
EarI CTCTTC 2 cut(s) 2, 1628
Eco31I GGTCTC 2 cut(s) 124, 340
Eco32I GATATC 1 cut(s) 949
Eco47I GGWCC 4 cut(s) 592, 1016, 1277, 1418
EcoO109I RGGNCCY 5 cut(s) 655, 838, 1117, 1277, 1418
EcoRII CCWGG 6 cut(s) 108, 324, 709, 1018, 1074, 1263
EcoRV GATATC 1 cut(s) 949
FaeI CATG 8 cut(s) 650, 699, 728, 832, 973, 1069, 1153, 1607
FalI AAGNNNNNCTT 2 cut(s) 1197, 1229
FaqI GGGAC 3 cut(s) 578, 773, 1518
FatI CATG 8 cut(s) 646, 695, 724, 828, 969, 1065, 1149, 1603
FauI CCCGC 2 cut(s) 1267, 1408
FauNDI CATATG 1 cut(s) 1009
FbaI TGATCA 2 cut(s) 261, 477
FblI GTMKAC 1 cut(s) 1260
Fnu4HI GCNGC 1 cut(s) 1547
FokI GGATG 3 cut(s) 788, 1038, 1580
Fsp4HI GCNGC 1 cut(s) 1547
FspBI CTAG 1 cut(s) 1556
GluI GCNGC 1 cut(s) 1547
GsaI CCCAGC 1 cut(s) 915
HaeIII GGCC 3 cut(s) 657, 839, 1118
HapII CCGG 2 cut(s) 510, 684
HgaI GACGC 2 cut(s) 746, 864
Hin1I GRCGYC 1 cut(s) 738
Hin1II CATG 8 cut(s) 650, 699, 728, 832, 973, 1069, 1153, 1607
HincII GTYRAC 1 cut(s) 587
HindII GTYRAC 1 cut(s) 587
HindIII AAGCTT 1 cut(s) 662
HinfI GANTC 5 cut(s) 43, 1208, 1315, 1456, 1640
HpaII CCGG 2 cut(s) 510, 684
HphI GGTGA 2 cut(s) 1604, 1618
Hpy166II GTNNAC 3 cut(s) 36, 587, 1261
Hpy188I TCNGA 4 cut(s) 42, 580, 679, 1176
Hpy188III TCNNGA 9 cut(s) 127, 343, 618, 725, 1037, 1245, 1287, 1428, 1604
Hpy8I GTNNAC 3 cut(s) 36, 587, 1261
HpyAV CCTTC 3 cut(s) 646, 1108, 1221
HpyCH4III ACNGT 6 cut(s) 259, 475, 788, 819, 1085, 1610
HpyCH4IV ACGT 1 cut(s) 959
HpyF10VI GCNNNNNNNGC 5 cut(s) 100, 316, 908, 1010, 1062
HpyF3I CTNAG 9 cut(s) 128, 344, 579, 763, 1175, 1387, 1528, 1638, 1646
HpySE526I ACGT 1 cut(s) 959
Hsp92I GRCGYC 1 cut(s) 738
Hsp92II CATG 8 cut(s) 650, 699, 728, 832, 973, 1069, 1153, 1607
KpnI GGTACC 1 cut(s) 823
Ksp22I TGATCA 2 cut(s) 261, 477
Kzo9I GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
LguI GCTCTTC 1 cut(s) 2
Lsp1109I GCAGC 1 cut(s) 1558
LweI GCATC 6 cut(s) 484, 670, 810, 1013, 1107, 1558
MabI ACCWGGT 3 cut(s) 709, 1018, 1263
MaeI CTAG 1 cut(s) 1556
MaeII ACGT 1 cut(s) 959
MaeIII GTNAC 4 cut(s) 788, 1070, 1610, 1641
MalI GATC 6 cut(s) 17, 263, 479, 600, 897, 1035
MboI GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
MboII GAAGA 2 cut(s) 19, 1615
MfeI CAATTG 2 cut(s) 72, 978
MhlI GDGCHC 4 cut(s) 175, 391, 1090, 1591
MlyI GAGTC 1 cut(s) 1649
MmeI TCCRAC 1 cut(s) 1026
MroXI GAANNNNTTC 1 cut(s) 673
MseI TTAA 5 cut(s) 249, 465, 624, 1560, 1666
MslI CAYNNNNRTG 1 cut(s) 729
MspA1I CMGCKG 2 cut(s) 491, 1346
MspI CCGG 2 cut(s) 510, 684
MspR9I CCNGG 7 cut(s) 110, 326, 685, 711, 1020, 1076, 1265
MunI CAATTG 2 cut(s) 72, 978
MvaI CCWGG 6 cut(s) 110, 326, 711, 1020, 1076, 1265
MwoI GCNNNNNNNGC 5 cut(s) 100, 316, 908, 1010, 1062
NciI CCSGG 1 cut(s) 685
NdeI CATATG 1 cut(s) 1009
NdeII GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
NlaIII CATG 8 cut(s) 650, 699, 728, 832, 973, 1069, 1153, 1607
NlaIV GGNNCC 5 cut(s) 594, 821, 1119, 1278, 1419
NmuCI GTSAC 2 cut(s) 1610, 1641
NspI RCATGY 1 cut(s) 699
PagI TCATGA 2 cut(s) 724, 1603
PciI ACATGT 1 cut(s) 695
PciSI GCTCTTC 1 cut(s) 2
PdmI GAANNNNTTC 1 cut(s) 673
PfeI GAWTC 4 cut(s) 43, 1208, 1315, 1456
PflFI GACNNNGTC 1 cut(s) 1639
PfoI TCCNGGA 2 cut(s) 108, 324
PkrI GCNGC 1 cut(s) 1548
PleI GAGTC 1 cut(s) 1648
PpsI GAGTC 1 cut(s) 1648
Ppu21I YACGTR 1 cut(s) 960
PpuMI RGGWCCY 2 cut(s) 1277, 1418
PscI ACATGT 1 cut(s) 695
PshBI ATTAAT 2 cut(s) 249, 465
Psp5II RGGWCCY 2 cut(s) 1277, 1418
Psp6I CCWGG 6 cut(s) 108, 324, 709, 1018, 1074, 1263
PspFI CCCAGC 1 cut(s) 911
PspGI CCWGG 6 cut(s) 108, 324, 709, 1018, 1074, 1263
PspN4I GGNNCC 5 cut(s) 594, 821, 1119, 1278, 1419
PspPI GGNCC 7 cut(s) 592, 655, 838, 1016, 1117, 1277, 1418
PspPPI RGGWCCY 2 cut(s) 1277, 1418
PstI CTGCAG 2 cut(s) 295, 1159
PsyI GACNNNGTC 1 cut(s) 1639
PvuII CAGCTG 2 cut(s) 491, 1346
RsaI GTAC 4 cut(s) 821, 937, 1619, 1651
RsaNI GTAC 4 cut(s) 820, 936, 1618, 1650
RseI CAYNNNNRTG 1 cut(s) 729
SapI GCTCTTC 1 cut(s) 2
SaqAI TTAA 5 cut(s) 249, 465, 624, 1560, 1666
SatI GCNGC 1 cut(s) 1547
Sau3AI GATC 6 cut(s) 15, 261, 477, 598, 895, 1033
Sau96I GGNCC 7 cut(s) 592, 655, 838, 1016, 1117, 1277, 1418
ScaI AGTACT 1 cut(s) 1651
SchI GAGTC 1 cut(s) 1649
ScrFI CCNGG 7 cut(s) 110, 326, 685, 711, 1020, 1076, 1265
SduI GDGCHC 4 cut(s) 175, 391, 1090, 1591
SexAI ACCWGGT 3 cut(s) 709, 1018, 1263
SfaNI GCATC 6 cut(s) 484, 670, 810, 1013, 1107, 1558
SfcI CTRYAG 2 cut(s) 291, 1155
SinI GGWCC 4 cut(s) 592, 1016, 1277, 1418
SmiMI CAYNNNNRTG 1 cut(s) 729
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
SpeI ACTAGT 1 cut(s) 1555
SsiI CCGC 2 cut(s) 1274, 1415
SspMI CTAG 1 cut(s) 1556
StyD4I CCNGG 7 cut(s) 108, 324, 683, 709, 1018, 1074, 1263
TaaI ACNGT 6 cut(s) 259, 475, 788, 819, 1085, 1610
TaiI ACGT 1 cut(s) 962
TaqI TCGA 1 cut(s) 706
TatI WGTACW 1 cut(s) 1649
TfiI GAWTC 4 cut(s) 43, 1208, 1315, 1456
Tru1I TTAA 5 cut(s) 249, 465, 624, 1560, 1666
Tru9I TTAA 5 cut(s) 249, 465, 624, 1560, 1666
TscAI CASTG 3 cut(s) 1395, 1506, 1536
TseFI GTSAC 2 cut(s) 1610, 1641
TseI GCWGC 1 cut(s) 1546
Tsp45I GTSAC 2 cut(s) 1610, 1641
TspDTI ATGAA 4 cut(s) 267, 483, 741, 1127
TspRI CASTG 3 cut(s) 1395, 1506, 1536
Tth111I GACNNNGTC 1 cut(s) 1639
VpaK11BI GGWCC 4 cut(s) 592, 1016, 1277, 1418
VspI ATTAAT 2 cut(s) 249, 465
XapI RAATTY 4 cut(s) 229, 445, 574, 1170
XceI RCATGY 1 cut(s) 699
XcmI CCANNNNNNNNNTGG 1 cut(s) 1211
XmiI GTMKAC 1 cut(s) 1260
XmnI GAANNNNTTC 1 cut(s) 673
XspI CTAG 1 cut(s) 1556
ZrmI AGTACT 1 cut(s) 1651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.