Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007105

Physical Location & Seq

Genomic Coordinates Reverse (-)

27216400 .. 27218942

Gene Structure 2543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G265000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 972 bp

ATGGGAAGCAACCACAAGAGACTGATCAAGGAGCTAGTTGAAGGGAAGAAGACGGCGACTGAGCTTCAGATGCTGCTTCACAAGCCCCTTGGAGATCATGGGTCGGCCTCAGCTGAGGAGCTTGTGGTGAAGATCATGACAAGTTTTACAGAGAGTCTCTCTGTTTTGGCTGCTGAGAAGAAGAACCCAGGTGATGGCCATGAAGATCACCAGTCTGGTGCTTTTGGTGAGGTTTATCAGATCAAACCGGAGCCTTCCCATTCGCATTGTGACGACCGGAGCTCTGGAGATTCCGGCGAGAGTAGGAAGGTGCAGGGTTCCAAGGATCGGAGAGGTTGCTACAAGAGAAGAAAGACTTCCCAATCATGGACAACAGTCTCTCCTGCAATTGAAGATGGCCGGGCTTGGAGAAAGTATGGCCAAAAGGAAATCCTCAATGCTCCATATCCAAGAGCTTACTTCCGATGCACACGCAAGTATGATCAGAACTGCAGAGCAACCAAACAAGTCCAGCAAGTCCAAGACAGCCCTCGCCTGTACCAAACCACATACATTGGCCAGCACACATGCAAAAGCATGGTCCCTCCACAGATGTTCATAGGCTCCTCTGATCATTGGGAATCTCAGACTGTGAGCTCAGAATCTGGGAGCCCAAACAAGCAAAACCATGATTTCTTTGGCTCATCAGCAATTCCCATTGTAAAACAGGAAGAATACAAGGAAGGGACACCAACACCAAGTGACCTAACAGACAACCTTTCCTCATTGGAGACTAATCATCTGTGGTCTGATTTCAAGGATGATTTTGCTTTGTGTGACCCTGCAGCAATGTGTGTGTCTACCAAGATGGGGTCTGATAATGAGGATGTGGTTTCAAACATGTACTTGGACATGGATTTCGTGGTCAAGTCTATCGATTTCGATGGTGATTTTAATTTTGATGAAGTTGAATTTCCTAAGAACTCCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009862 GO:0009863 GO:0009864 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048831 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1900055 GO:1900056 GO:1901698 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905622 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

324

Amino Acids

36.3

Weight (kDa)

5.69

Isoelectric Point (pI)

50.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40750 AT3G56400
fragaria_vesca	FvH4_7g26030
malus_domestica	MD01G1168600.v1.1 MD07G1234700.v1.1
prunus_persica	Prupe.2G265000_v2.0.a1
pyrus_communis	pycom01g18160 pycom07g21230
rosa_chinensis	RchiOBHm_Chr1g0372441 RchiOBHm_Chr1g0372521
rosa_laevigata	RLG00000026893 RLG00000026898
rosa_multiflora	Rmu_co8027390.1_g000001 Rmu_co8028224.1_g000001 Rmu_sc0001755.1_g000001
rosa_roxburghii	Rroxscaffold_4G00284920
rosa_rugosa	Rorug01G0371900
rosa_samantha	Rh1AG380400 Rh1AG381100 Rh1BG344000 Rh1BG344500 Rh1CG357400 Rh1DG375200 Rh1DG375700
rosa_wichuraiana	Rw1G033450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	194
AccI	GTMKAC	1 cut(s)	839
AclWI	GGATC	1 cut(s)	333
AcoI	YGGCCR	4 cut(s)	196, 397, 418, 556
AcsI	RAATTY	1 cut(s)	950
AcuI	CTGAAG	1 cut(s)	50
AdeI	CACNNNGTG	1 cut(s)	740
AfaI	GTAC	2 cut(s)	539, 884
AfiI	CCNNNNNNNGG	4 cut(s)	194, 327, 366, 849
AflIII	ACRYGT	1 cut(s)	879
AgsI	TTSAA	5 cut(s)	41, 392, 796, 876, 950
AjnI	CCWGG	1 cut(s)	187
AluBI	AGCT	7 cut(s)	34, 64, 113, 121, 282, 455, 636
AluI	AGCT	7 cut(s)	34, 64, 113, 121, 282, 455, 636
Alw21I	GWGCWC	2 cut(s)	284, 638
Alw26I	GTCTC	4 cut(s)	13, 161, 382, 764
AlwI	GGATC	1 cut(s)	333
AlwNI	CAGNNNCTG	2 cut(s)	73, 644
AoxI	GGCC	5 cut(s)	105, 196, 397, 418, 556
ApeKI	GCWGC	3 cut(s)	73, 170, 824
ApoI	RAATTY	1 cut(s)	950
ArsI	GACNNNNNNTTYG	4 cut(s)	564, 596, 881, 913
Asp700I	GAANNNNTTC	1 cut(s)	355
AspS9I	GGNCC	1 cut(s)	580
AsuC2I	CCSGG	1 cut(s)	401
AsuHPI	GGTGA	5 cut(s)	139, 200, 203, 239, 938
AvaII	GGWCC	1 cut(s)	580
BalI	TGGCCA	3 cut(s)	198, 420, 558
BanII	GRGCYC	3 cut(s)	284, 638, 653
BbsI	GAAGAC	1 cut(s)	56
Bbv12I	GWGCWC	2 cut(s)	284, 638
BbvCI	CCTCAGC	2 cut(s)	109, 114
BbvI	GCAGC	3 cut(s)	60, 157, 836
BccI	CCATC	4 cut(s)	188, 389, 841, 917
BceAI	ACGGC	1 cut(s)	69
BciT130I	CCWGG	1 cut(s)	189
BclI	TGATCA	3 cut(s)	24, 481, 610
BcnI	CCSGG	1 cut(s)	401
BcoDI	GTCTC	4 cut(s)	13, 161, 382, 764
BfaI	CTAG	1 cut(s)	35
BfmI	CTRYAG	2 cut(s)	490, 822
BisI	GCNGC	3 cut(s)	74, 171, 825
BlsI	GCNGC	3 cut(s)	75, 172, 826
Bme1390I	CCNGG	2 cut(s)	189, 401
Bme18I	GGWCC	1 cut(s)	580
BmgT120I	GGNCC	1 cut(s)	580
BmiI	GGNNCC	5 cut(s)	252, 319, 582, 604, 650
BmrFI	CCNGG	2 cut(s)	189, 401
BmsI	GCATC	2 cut(s)	60, 455
BoxI	GACNNNNGTC	1 cut(s)	374
BpiI	GAAGAC	1 cut(s)	56
BplI	GAGNNNNNCTC	2 cut(s)	143, 175
BpmI	CTGGAG	1 cut(s)	306
Bpu10I	CCTNAGC	2 cut(s)	109, 114
BpuMI	CCSGG	1 cut(s)	401
Bsa29I	ATCGAT	1 cut(s)	915
BsaJI	CCNNGG	3 cut(s)	88, 187, 321
BsaWI	WCCGGW	2 cut(s)	247, 276
BsaXI	ACNNNNNCTCC	2 cut(s)	364, 394
Bsc4I	CCNNNNNNNGG	4 cut(s)	194, 327, 366, 849
Bse1I	ACTGG	1 cut(s)	211
Bse3DI	GCAATG	1 cut(s)	834
BseBI	CCWGG	1 cut(s)	189
BseCI	ATCGAT	1 cut(s)	915
BseDI	CCNNGG	3 cut(s)	88, 187, 321
BseGI	GGATG	2 cut(s)	805, 871
BseLI	CCNNNNNNNGG	4 cut(s)	194, 327, 366, 849
BseMI	GCAATG	1 cut(s)	834
BseMII	CTCAG	6 cut(s)	51, 105, 123, 165, 638, 651
BseNI	ACTGG	1 cut(s)	211
BseRI	GAGGAG	2 cut(s)	131, 595
BseXI	GCAGC	3 cut(s)	60, 157, 836
BsgI	GTGCAG	1 cut(s)	332
Bsh1285I	CGRYCG	1 cut(s)	277
BshFI	GGCC	5 cut(s)	107, 198, 399, 420, 558
BshVI	ATCGAT	1 cut(s)	915
BsiEI	CGRYCG	1 cut(s)	277
BsiHKAI	GWGCWC	2 cut(s)	284, 638
BsiSI	CCGG	4 cut(s)	248, 277, 294, 400
BslFI	GGGAC	2 cut(s)	566, 739
BslI	CCNNNNNNNGG	4 cut(s)	194, 327, 366, 849
BsmAI	GTCTC	4 cut(s)	13, 161, 382, 764
BsmFI	GGGAC	2 cut(s)	566, 739
BsnI	GGCC	5 cut(s)	107, 198, 399, 420, 558
Bsp1286I	GDGCHC	3 cut(s)	284, 638, 653
Bsp143I	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
BspANI	GGCC	5 cut(s)	107, 198, 399, 420, 558
BspCNI	CTCAG	6 cut(s)	52, 106, 122, 166, 637, 650
BspDI	ATCGAT	1 cut(s)	915
BspHI	TCATGA	1 cut(s)	135
BspLI	GGNNCC	5 cut(s)	252, 319, 582, 604, 650
BspMAI	CTGCAG	2 cut(s)	494, 826
BspPI	GGATC	1 cut(s)	333
BsrDI	GCAATG	1 cut(s)	834
BsrI	ACTGG	1 cut(s)	211
BssECI	CCNNGG	3 cut(s)	88, 187, 321
BssMI	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
BssT1I	CCWWGG	2 cut(s)	88, 321
Bst2UI	CCWGG	1 cut(s)	189
Bst4CI	ACNGT	2 cut(s)	376, 631
BstC8I	GCNNGC	1 cut(s)	560
BstDEI	CTNAG	7 cut(s)	60, 109, 114, 174, 624, 637, 957
BstF5I	GGATG	2 cut(s)	805, 871
BstKTI	GATC	8 cut(s)	27, 97, 135, 208, 243, 328, 484, 613
BstMAI	GTCTC	4 cut(s)	13, 161, 382, 764
BstMBI	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
BstMCI	CGRYCG	1 cut(s)	277
BstMWI	GCNNNNNNNGC	2 cut(s)	70, 82
BstNI	CCWGG	1 cut(s)	189
BstNSI	RCATGY	2 cut(s)	570, 883
BstPAI	GACNNNNGTC	1 cut(s)	374
BstSCI	CCNGG	2 cut(s)	187, 399
BstSFI	CTRYAG	2 cut(s)	490, 822
BstV1I	GCAGC	3 cut(s)	60, 157, 836
BstV2I	GAAGAC	1 cut(s)	56
Bsu15I	ATCGAT	1 cut(s)	915
BsuRI	GGCC	5 cut(s)	107, 198, 399, 420, 558
BsuTUI	ATCGAT	1 cut(s)	915
BtsCI	GGATG	2 cut(s)	805, 871
Cac8I	GCNNGC	1 cut(s)	560
CaiI	CAGNNNCTG	2 cut(s)	73, 644
CciI	TCATGA	1 cut(s)	135
Cfr13I	GGNCC	1 cut(s)	580
ClaI	ATCGAT	1 cut(s)	915
Csp6I	GTAC	2 cut(s)	538, 883
CspCI	CAANNNNNGTGG	2 cut(s)	535, 570
CviAII	CATG	9 cut(s)	98, 136, 200, 366, 567, 577, 668, 880, 892
CviQI	GTAC	2 cut(s)	538, 883
DdeI	CTNAG	7 cut(s)	60, 109, 114, 174, 624, 637, 957
DpnI	GATC	8 cut(s)	26, 96, 134, 207, 242, 327, 483, 612
DpnII	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
DraIII	CACNNNGTG	1 cut(s)	740
EaeI	YGGCCR	4 cut(s)	196, 397, 418, 556
Ecl136II	GAGCTC	2 cut(s)	282, 636
Eco130I	CCWWGG	2 cut(s)	88, 321
Eco24I	GRGCYC	3 cut(s)	284, 638, 653
Eco47I	GGWCC	1 cut(s)	580
Eco53kI	GAGCTC	2 cut(s)	282, 636
Eco57I	CTGAAG	1 cut(s)	50
EcoICRI	GAGCTC	2 cut(s)	282, 636
EcoRII	CCWGG	1 cut(s)	187
EcoT14I	CCWWGG	2 cut(s)	88, 321
EcoT38I	GRGCYC	3 cut(s)	284, 638, 653
ErhI	CCWWGG	2 cut(s)	88, 321
FaeI	CATG	9 cut(s)	101, 139, 203, 369, 570, 580, 671, 883, 895
FalI	AAGNNNNNCTT	3 cut(s)	340, 372, 950
FaqI	GGGAC	2 cut(s)	566, 739
FatI	CATG	9 cut(s)	97, 135, 199, 365, 566, 576, 667, 879, 891
FbaI	TGATCA	3 cut(s)	24, 481, 610
FblI	GTMKAC	1 cut(s)	839
Fnu4HI	GCNGC	3 cut(s)	74, 171, 825
FokI	GGATG	2 cut(s)	812, 878
FriOI	GRGCYC	3 cut(s)	284, 638, 653
Fsp4HI	GCNGC	3 cut(s)	74, 171, 825
FspBI	CTAG	1 cut(s)	35
GluI	GCNGC	3 cut(s)	74, 171, 825
GsuI	CTGGAG	1 cut(s)	306
HaeIII	GGCC	5 cut(s)	107, 198, 399, 420, 558
HapII	CCGG	4 cut(s)	248, 277, 294, 400
Hin1II	CATG	9 cut(s)	101, 139, 203, 369, 570, 580, 671, 883, 895
HinfI	GANTC	4 cut(s)	154, 290, 620, 641
HpaII	CCGG	4 cut(s)	248, 277, 294, 400
HphI	GGTGA	5 cut(s)	139, 200, 203, 239, 938
Hpy166II	GTNNAC	1 cut(s)	840
Hpy188III	TCNNGA	2 cut(s)	136, 285
Hpy8I	GTNNAC	1 cut(s)	840
HpyAV	CCTTC	4 cut(s)	35, 264, 301, 716
HpyCH4III	ACNGT	2 cut(s)	376, 631
HpyCH4V	TGCA	6 cut(s)	313, 386, 468, 492, 570, 824
HpyF10VI	GCNNNNNNNGC	2 cut(s)	70, 82
HpyF3I	CTNAG	7 cut(s)	60, 109, 114, 174, 624, 637, 957
Hsp92II	CATG	9 cut(s)	101, 139, 203, 369, 570, 580, 671, 883, 895
Ksp22I	TGATCA	3 cut(s)	24, 481, 610
Kzo9I	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
LmnI	GCTCC	7 cut(s)	31, 118, 250, 279, 445, 608, 648
Lsp1109I	GCAGC	3 cut(s)	60, 157, 836
LweI	GCATC	2 cut(s)	60, 455
MaeI	CTAG	1 cut(s)	35
MaeIII	GTNAC	3 cut(s)	269, 740, 815
MalI	GATC	8 cut(s)	26, 96, 134, 207, 242, 327, 483, 612
MboI	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
MboII	GAAGA	9 cut(s)	58, 61, 142, 190, 193, 215, 360, 404, 722
MfeI	CAATTG	1 cut(s)	387
MhlI	GDGCHC	3 cut(s)	284, 638, 653
MlsI	TGGCCA	3 cut(s)	198, 420, 558
MluCI	AATT	4 cut(s)	387, 690, 934, 950
MluNI	TGGCCA	3 cut(s)	198, 420, 558
MlyI	GAGTC	1 cut(s)	163
Mox20I	TGGCCA	3 cut(s)	198, 420, 558
MroXI	GAANNNNTTC	1 cut(s)	355
MscI	TGGCCA	3 cut(s)	198, 420, 558
MseI	TTAA	1 cut(s)	933
Msp20I	TGGCCA	3 cut(s)	198, 420, 558
MspA1I	CMGCKG	1 cut(s)	113
MspI	CCGG	4 cut(s)	248, 277, 294, 400
MspR9I	CCNGG	2 cut(s)	189, 401
MunI	CAATTG	1 cut(s)	387
MvaI	CCWGG	1 cut(s)	189
MwoI	GCNNNNNNNGC	2 cut(s)	70, 82
NciI	CCSGG	1 cut(s)	401
NdeII	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
NlaIII	CATG	9 cut(s)	101, 139, 203, 369, 570, 580, 671, 883, 895
NlaIV	GGNNCC	5 cut(s)	252, 319, 582, 604, 650
NmuCI	GTSAC	3 cut(s)	269, 740, 815
NspI	RCATGY	2 cut(s)	570, 883
PagI	TCATGA	1 cut(s)	135
PciI	ACATGT	1 cut(s)	879
PdmI	GAANNNNTTC	1 cut(s)	355
PfeI	GAWTC	3 cut(s)	290, 620, 641
PflMI	CCANNNNNTGG	1 cut(s)	194
PkrI	GCNGC	3 cut(s)	75, 172, 826
PleI	GAGTC	1 cut(s)	162
PpsI	GAGTC	1 cut(s)	162
PscI	ACATGT	1 cut(s)	879
PshAI	GACNNNNGTC	1 cut(s)	374
Psp124BI	GAGCTC	2 cut(s)	284, 638
Psp6I	CCWGG	1 cut(s)	187
PspGI	CCWGG	1 cut(s)	187
PspN4I	GGNNCC	5 cut(s)	252, 319, 582, 604, 650
PspPI	GGNCC	1 cut(s)	580
PstI	CTGCAG	2 cut(s)	494, 826
PstNI	CAGNNNCTG	2 cut(s)	73, 644
PvuII	CAGCTG	1 cut(s)	113
RsaI	GTAC	2 cut(s)	539, 884
RsaNI	GTAC	2 cut(s)	538, 883
SacI	GAGCTC	2 cut(s)	284, 638
SaqAI	TTAA	1 cut(s)	933
SatI	GCNGC	3 cut(s)	74, 171, 825
Sau3AI	GATC	8 cut(s)	24, 94, 132, 205, 240, 325, 481, 610
Sau96I	GGNCC	1 cut(s)	580
SchI	GAGTC	1 cut(s)	163
ScrFI	CCNGG	2 cut(s)	189, 401
SduI	GDGCHC	3 cut(s)	284, 638, 653
SfaNI	GCATC	2 cut(s)	60, 455
SfcI	CTRYAG	2 cut(s)	490, 822
SinI	GGWCC	1 cut(s)	580
Sse9I	AATT	4 cut(s)	387, 690, 934, 950
SspMI	CTAG	1 cut(s)	35
SstI	GAGCTC	2 cut(s)	284, 638
StyD4I	CCNGG	2 cut(s)	187, 399
StyI	CCWWGG	2 cut(s)	88, 321
TaaI	ACNGT	2 cut(s)	376, 631
TaqI	TCGA	2 cut(s)	915, 921
TasI	AATT	4 cut(s)	387, 690, 934, 950
TatI	WGTACW	1 cut(s)	882
TfiI	GAWTC	3 cut(s)	290, 620, 641
Tru1I	TTAA	1 cut(s)	933
Tru9I	TTAA	1 cut(s)	933
TseFI	GTSAC	3 cut(s)	269, 740, 815
TseI	GCWGC	3 cut(s)	73, 170, 824
Tsp45I	GTSAC	3 cut(s)	269, 740, 815
TspDTI	ATGAA	3 cut(s)	216, 586, 957
Van91I	CCANNNNNTGG	1 cut(s)	194
VpaK11BI	GGWCC	1 cut(s)	580
XapI	RAATTY	1 cut(s)	950
XceI	RCATGY	2 cut(s)	570, 883
XcmI	CCANNNNNNNNNTGG	1 cut(s)	674
XmiI	GTMKAC	1 cut(s)	839
XmnI	GAANNNNTTC	1 cut(s)	355
XspI	CTAG	1 cut(s)	35

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.