Prupe.3G013400_v2.0.a1

transmembrane protein 64-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
946412 .. 948402
1991 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G013400.1

Sequence Viewer

Length: 249 bp
ATGAGAATTTGGGGGGAAGATGACAAAGGGCACTATGTGAAGTTGAGGGGTGATCATGGCGATTACGGATCGGCGGAGGGGTTTGAGGGGCTGGTGGAGCCCTCTTTCTCGAAAAAGTTAGCGTCTTTGTGGTATTGGATTCGGTTGGTATTGTTGGTCATGTGCTTGGTTTTGTTGGCTGGCTATGTAAGGTTTATATTGGAGTGCATGAATTTTTTGTTCTATATACAATTAACCTACCTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

9.69

Weight (kDa)

6.04

Isoelectric Point (pI)

33.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 74
AclWI GGATC 1 cut(s) 76
AcsI RAATTY 2 cut(s) 6, 211
AdeI CACNNNGTG 1 cut(s) 37
AfiI CCNNNNNNNGG 1 cut(s) 243
AlwI GGATC 1 cut(s) 76
ApoI RAATTY 2 cut(s) 6, 211
AsuHPI GGTGA 1 cut(s) 62
BaeGI GKGCMC 1 cut(s) 33
BanII GRGCYC 1 cut(s) 102
BclI TGATCA 1 cut(s) 52
BmiI GGNNCC 1 cut(s) 99
Bsc4I CCNNNNNNNGG 1 cut(s) 243
BseLI CCNNNNNNNGG 1 cut(s) 243
BseSI GKGCMC 1 cut(s) 33
BslI CCNNNNNNNGG 1 cut(s) 243
Bsp1286I GDGCHC 2 cut(s) 33, 102
Bsp143I GATC 2 cut(s) 52, 68
BspACI CCGC 1 cut(s) 74
BspLI GGNNCC 1 cut(s) 99
BspPI GGATC 1 cut(s) 76
BssMI GATC 2 cut(s) 52, 68
BstC8I GCNNGC 1 cut(s) 181
BstKTI GATC 2 cut(s) 55, 71
BstMBI GATC 2 cut(s) 52, 68
BstMWI GCNNNNNNNGC 1 cut(s) 97
BstSLI GKGCMC 1 cut(s) 33
Cac8I GCNNGC 1 cut(s) 181
CseI GACGC 1 cut(s) 111
CviAII CATG 3 cut(s) 56, 160, 208
CviJI RGCY 4 cut(s) 91, 100, 179, 183
CviKI_1 RGCY 4 cut(s) 91, 100, 179, 183
DpnI GATC 2 cut(s) 54, 70
DpnII GATC 2 cut(s) 52, 68
DraIII CACNNNGTG 1 cut(s) 37
EciI GGCGGA 1 cut(s) 89
Eco24I GRGCYC 1 cut(s) 102
EcoT38I GRGCYC 1 cut(s) 102
FaeI CATG 3 cut(s) 59, 163, 211
FaiI YATR 8 cut(s) 36, 57, 161, 186, 197, 209, 225, 227
FatI CATG 3 cut(s) 55, 159, 207
FbaI TGATCA 1 cut(s) 52
FriOI GRGCYC 1 cut(s) 102
HgaI GACGC 1 cut(s) 111
Hin1II CATG 3 cut(s) 59, 163, 211
HinfI GANTC 1 cut(s) 139
HphI GGTGA 1 cut(s) 62
Hpy188III TCNNGA 1 cut(s) 109
HpyCH4V TGCA 1 cut(s) 207
HpyF10VI GCNNNNNNNGC 1 cut(s) 97
Hsp92II CATG 3 cut(s) 59, 163, 211
Ksp22I TGATCA 1 cut(s) 52
Kzo9I GATC 2 cut(s) 52, 68
LmnI GCTCC 1 cut(s) 97
LpnPI CCDG 3 cut(s) 77, 165, 229
MalI GATC 2 cut(s) 54, 70
MboI GATC 2 cut(s) 52, 68
MboII GAAGA 1 cut(s) 29
MhlI GDGCHC 2 cut(s) 33, 102
MluCI AATT 3 cut(s) 6, 211, 230
MnlI CCTC 4 cut(s) 39, 70, 79, 112
MseI TTAA 1 cut(s) 233
MwoI GCNNNNNNNGC 1 cut(s) 97
NdeII GATC 2 cut(s) 52, 68
NlaIII CATG 3 cut(s) 59, 163, 211
NlaIV GGNNCC 1 cut(s) 99
PfeI GAWTC 1 cut(s) 139
PspN4I GGNNCC 1 cut(s) 99
SaqAI TTAA 1 cut(s) 233
Sau3AI GATC 2 cut(s) 52, 68
SduI GDGCHC 2 cut(s) 33, 102
SetI ASST 3 cut(s) 194, 239, 243
SgeI CNNG 7 cut(s) 68, 104, 121, 172, 178, 192, 220
Sse9I AATT 3 cut(s) 6, 211, 230
SsiI CCGC 1 cut(s) 74
TaqI TCGA 1 cut(s) 110
TasI AATT 3 cut(s) 6, 211, 230
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 1 cut(s) 233
Tru9I TTAA 1 cut(s) 233
TspDTI ATGAA 1 cut(s) 224
TspGWI ACGGA 1 cut(s) 81
XapI RAATTY 2 cut(s) 6, 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.