Prupe.3G034900_v2.0.a1

sugar transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
2550134 .. 2551429
1296 bp
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UTR
Exon/CDS
Intron
Prupe.3G034900.1

Sequence Viewer

Length: 669 bp
ATGGACACCGATATGATTAGAACCATTGTCGGCATTATTGGCAATGTAATCTCTTTTGGCTTATTTGTCTCCCCAATCCCAACATTTGTGAAGATAATAAAGCAAAAATCAGTTGCTGAGTTCAGGCCGGATCCTTACATAGTAACATTGCTCAATTGTGCTTTGTGGTCATTCTATGGTCTGCCAATAGTCCATCCTGACAACCTTCTTGTTGTTACGATTAATGGCACTGGACTTGTCATTGAATTCATTTACATCGCCATCTTTTTCGTATTCTCTCCCGGAAAAAAGCGCCGAAACATCATCATTGCGCTTCTAGTTGAAGTTGTCTTCTTTGCCGTTGTGGTTTTCATTACTCTACACTTTTTCCATGACACTAAAGGCCGGTCTATGATAATTGGGATCTTGAGTATTGTCTTCAATATCATTATGTATAATTCACCTTTGACAGTCATGAAAATGGTCATCAAGACAAAGAGCGTCAAGTACATGCCATTTTACCTCTCACTCGCAAATTTGTGCAATGGAATTGTCTGGACCATCTATGCGCTTCTTAAATTTGATCCCTACCTTCTGCTTCCAAATGGTTTGGGAGCAGTTTCCGGTGCGGTGCAAATCATCCTGTATGCTACCTACTACAAGACCACAAATTGGGATGAGGATGGATGA

Protein Analysis

223

Amino Acids

25.0

Weight (kDa)

9.15

Isoelectric Point (pI)

34.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 651
AciI CCGC 1 cut(s) 608
AclWI GGATC 4 cut(s) 125, 138, 410, 557
AcsI RAATTY 3 cut(s) 245, 514, 557
AfaI GTAC 1 cut(s) 488
AfiI CCNNNNNNNGG 1 cut(s) 651
AgsI TTSAA 3 cut(s) 245, 323, 421
Alw26I GTCTC 1 cut(s) 73
AlwI GGATC 4 cut(s) 125, 138, 410, 557
AlwNI CAGNNNCTG 1 cut(s) 116
AoxI GGCC 2 cut(s) 125, 382
ApoI RAATTY 3 cut(s) 245, 514, 557
AseI ATTAAT 1 cut(s) 222
AspLEI GCGC 3 cut(s) 294, 313, 550
AspS9I GGNCC 1 cut(s) 537
AsuC2I CCSGG 1 cut(s) 282
AsuHPI GGTGA 1 cut(s) 432
AvaII GGWCC 1 cut(s) 537
BamHI GGATCC 1 cut(s) 130
BbsI GAAGAC 2 cut(s) 322, 409
BccI CCATC 4 cut(s) 201, 269, 548, 656
BceAI ACGGC 1 cut(s) 323
BcnI CCSGG 1 cut(s) 282
BcoDI GTCTC 1 cut(s) 73
BfaI CTAG 1 cut(s) 317
BfoI RGCGCY 1 cut(s) 295
Bme1390I CCNGG 1 cut(s) 282
Bme18I GGWCC 1 cut(s) 537
BmgT120I GGNCC 1 cut(s) 537
BmiI GGNNCC 1 cut(s) 132
BmrFI CCNGG 1 cut(s) 282
BpiI GAAGAC 2 cut(s) 322, 409
BpuEI CTTGAG 1 cut(s) 427
BpuMI CCSGG 1 cut(s) 282
BsaWI WCCGGW 1 cut(s) 602
Bsc4I CCNNNNNNNGG 1 cut(s) 651
Bse118I RCCGGY 1 cut(s) 384
Bse1I ACTGG 1 cut(s) 235
Bse3DI GCAATG 4 cut(s) 49, 146, 306, 529
BseGI GGATG 4 cut(s) 193, 618, 661, 667
BseLI CCNNNNNNNGG 1 cut(s) 651
BseMI GCAATG 4 cut(s) 49, 146, 306, 529
BseMII CTCAG 1 cut(s) 108
BseNI ACTGG 1 cut(s) 235
BshFI GGCC 2 cut(s) 127, 384
BsiSI CCGG 4 cut(s) 128, 282, 385, 603
BslI CCNNNNNNNGG 1 cut(s) 651
BsmAI GTCTC 1 cut(s) 73
BsnI GGCC 2 cut(s) 127, 384
Bsp143I GATC 3 cut(s) 130, 402, 562
BspACI CCGC 1 cut(s) 608
BspANI GGCC 2 cut(s) 127, 384
BspCNI CTCAG 1 cut(s) 109
BspHI TCATGA 1 cut(s) 453
BspLI GGNNCC 1 cut(s) 132
BspPI GGATC 4 cut(s) 125, 138, 410, 557
BsrDI GCAATG 4 cut(s) 49, 146, 306, 529
BsrFI RCCGGY 1 cut(s) 384
BsrI ACTGG 1 cut(s) 235
BssAI RCCGGY 1 cut(s) 384
BssMI GATC 3 cut(s) 130, 402, 562
Bst4CI ACNGT 1 cut(s) 451
BstDEI CTNAG 1 cut(s) 117
BstF5I GGATG 4 cut(s) 193, 618, 661, 667
BstH2I RGCGCY 1 cut(s) 295
BstHHI GCGC 3 cut(s) 294, 313, 550
BstKTI GATC 3 cut(s) 133, 405, 565
BstMAI GTCTC 1 cut(s) 73
BstMBI GATC 3 cut(s) 130, 402, 562
BstMWI GCNNNNNNNGC 1 cut(s) 39
BstNSI RCATGY 1 cut(s) 493
BstSCI CCNGG 1 cut(s) 280
BstV2I GAAGAC 2 cut(s) 322, 409
BstX2I RGATCY 2 cut(s) 130, 402
BstYI RGATCY 2 cut(s) 130, 402
BsuRI GGCC 2 cut(s) 127, 384
BtgZI GCGATG 1 cut(s) 241
BtsCI GGATG 4 cut(s) 193, 618, 661, 667
BtsIMutI CAGTG 1 cut(s) 228
CaiI CAGNNNCTG 1 cut(s) 116
CciI TCATGA 1 cut(s) 453
CfoI GCGC 3 cut(s) 294, 313, 550
Cfr10I RCCGGY 1 cut(s) 384
Cfr13I GGNCC 1 cut(s) 537
CseI GACGC 1 cut(s) 469
Csp6I GTAC 1 cut(s) 487
CviAII CATG 3 cut(s) 371, 454, 490
CviJI RGCY 3 cut(s) 60, 127, 384
CviKI_1 RGCY 3 cut(s) 60, 127, 384
CviQI GTAC 1 cut(s) 487
DdeI CTNAG 1 cut(s) 117
DpnI GATC 3 cut(s) 132, 404, 564
DpnII GATC 3 cut(s) 130, 402, 562
Eco47I GGWCC 1 cut(s) 537
EcoRI GAATTC 1 cut(s) 245
FaeI CATG 3 cut(s) 374, 457, 493
FatI CATG 3 cut(s) 370, 453, 489
FokI GGATG 2 cut(s) 180, 605
FspBI CTAG 1 cut(s) 317
GlaI GCGC 3 cut(s) 293, 312, 549
HaeII RGCGCY 1 cut(s) 295
HaeIII GGCC 2 cut(s) 127, 384
HapII CCGG 4 cut(s) 128, 282, 385, 603
HgaI GACGC 1 cut(s) 469
HhaI GCGC 3 cut(s) 294, 313, 550
Hin1II CATG 3 cut(s) 374, 457, 493
Hin6I GCGC 3 cut(s) 292, 311, 548
HinP1I GCGC 3 cut(s) 292, 311, 548
HpaII CCGG 4 cut(s) 128, 282, 385, 603
HphI GGTGA 1 cut(s) 432
Hpy188III TCNNGA 5 cut(s) 197, 406, 454, 469, 535
HpyAV CCTTC 2 cut(s) 215, 581
HpyCH4III ACNGT 1 cut(s) 451
HpyCH4V TGCA 2 cut(s) 522, 613
HpyF10VI GCNNNNNNNGC 1 cut(s) 39
HpyF3I CTNAG 1 cut(s) 117
Hsp92II CATG 3 cut(s) 374, 457, 493
HspAI GCGC 3 cut(s) 292, 311, 548
Kzo9I GATC 3 cut(s) 130, 402, 562
LmnI GCTCC 1 cut(s) 593
LpnPI CCDG 9 cut(s) 109, 141, 210, 216, 295, 398, 520, 616, 635
MaeI CTAG 1 cut(s) 317
MaeIII GTNAC 2 cut(s) 142, 214
MalI GATC 3 cut(s) 132, 404, 564
MboI GATC 3 cut(s) 130, 402, 562
MboII GAAGA 3 cut(s) 103, 322, 409
MfeI CAATTG 1 cut(s) 154
MflI RGATCY 2 cut(s) 130, 402
MluCI AATT 8 cut(s) 154, 245, 396, 436, 514, 528, 557, 649
MnlI CCTC 2 cut(s) 512, 652
MseI TTAA 2 cut(s) 222, 555
MslI CAYNNNNRTG 2 cut(s) 11, 458
MspI CCGG 4 cut(s) 128, 282, 385, 603
MspR9I CCNGG 1 cut(s) 282
MunI CAATTG 1 cut(s) 154
MwoI GCNNNNNNNGC 1 cut(s) 39
NciI CCSGG 1 cut(s) 282
NdeII GATC 3 cut(s) 130, 402, 562
NlaIII CATG 3 cut(s) 374, 457, 493
NlaIV GGNNCC 1 cut(s) 132
NspI RCATGY 1 cut(s) 493
PagI TCATGA 1 cut(s) 453
PflMI CCANNNNNTGG 1 cut(s) 651
PfoI TCCNGGA 1 cut(s) 280
PshBI ATTAAT 1 cut(s) 222
PspN4I GGNNCC 1 cut(s) 132
PspPI GGNCC 1 cut(s) 537
PstNI CAGNNNCTG 1 cut(s) 116
PsuI RGATCY 2 cut(s) 130, 402
RsaI GTAC 1 cut(s) 488
RsaNI GTAC 1 cut(s) 487
RseI CAYNNNNRTG 2 cut(s) 11, 458
SaqAI TTAA 2 cut(s) 222, 555
Sau3AI GATC 3 cut(s) 130, 402, 562
Sau96I GGNCC 1 cut(s) 537
ScrFI CCNGG 1 cut(s) 282
SetI ASST 5 cut(s) 207, 445, 504, 573, 635
SinI GGWCC 1 cut(s) 537
SmiMI CAYNNNNRTG 2 cut(s) 11, 458
SmlI CTYRAG 1 cut(s) 406
SmoI CTYRAG 1 cut(s) 406
Sse9I AATT 8 cut(s) 154, 245, 396, 436, 514, 528, 557, 649
SsiI CCGC 1 cut(s) 608
SspMI CTAG 1 cut(s) 317
StyD4I CCNGG 1 cut(s) 280
TaaI ACNGT 1 cut(s) 451
TasI AATT 8 cut(s) 154, 245, 396, 436, 514, 528, 557, 649
TatI WGTACW 1 cut(s) 486
Tru1I TTAA 2 cut(s) 222, 555
Tru9I TTAA 2 cut(s) 222, 555
TscAI CASTG 1 cut(s) 235
TspDTI ATGAA 3 cut(s) 238, 340, 470
TspRI CASTG 1 cut(s) 235
Van91I CCANNNNNTGG 1 cut(s) 651
VpaK11BI GGWCC 1 cut(s) 537
VspI ATTAAT 1 cut(s) 222
XapI RAATTY 3 cut(s) 245, 514, 557
XceI RCATGY 1 cut(s) 493
XspI CTAG 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.