Rh2DG475800

sugar transporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
68874128 .. 68876451
2324 bp
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UTR
Exon/CDS
Intron
Rh2DG475800.1

Sequence Viewer

Length: 579 bp
ATGGTGAACACAGATGCCATTAGAACTGTTGTTGGGATCATTGGTAATGTCATCTCTTTCGGCTTGTTTACGTCCCCAATCCCAACATTTGTAAAGATAATTAAGGACAAATCAGTTGGAGATTTCAAGGCCGATCCTTATGTAGCAACTTTGCTTAATTGTGCTATGTGGTCCTTTTATGGCCTTCCCATTGTCCATCCTGATAGTCTCCTCGTTGTTACGATCAATGGCGCTGGCTTCTTCATCGAACTCATCTATGTTTCAATCTTTCTCTTATATTCTCCTGCCCAAAAACGGCGAAAAATCATCAGTGCTCTTCTGGTTGAAGCAATCTTTTTTGCCGTTGTGGTTTTTATTACTATTCACGTTTTCCATACCACTAAAGACAGGTCTATGATAATTGGGATTTTGTGTATTGTCTTCAATATCATTATGTATGCATCACCCTTAACAGTCATGAAAATGGTCATCAAGACAAAAAGTGTCAAGTACATGCCATTTGCCCTCTCGCTCGCCAACTTTTGCAATGGAGTTGTCTGGTCTATTTATGCACTCCTCAAGTTTGACCCCTATGTTCTG

Protein Analysis

193

Amino Acids

21.54

Weight (kDa)

9.38

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MtN3_slv PF03083 10 - 97 3.8e-23 Sugar efflux transporter for intercellular exchange
MtN3_slv PF03083 133 - 192 5.1e-18 Sugar efflux transporter for intercellular exchange
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 44, 128
AfaI GTAC 1 cut(s) 491
AfiI CCNNNNNNNGG 1 cut(s) 294
AgsI TTSAA 4 cut(s) 127, 264, 326, 424
Alw21I GWGCWC 1 cut(s) 316
Alw26I GTCTC 1 cut(s) 212
AlwI GGATC 2 cut(s) 44, 128
AoxI GGCC 2 cut(s) 129, 181
AspLEI GCGC 1 cut(s) 233
AspS9I GGNCC 1 cut(s) 171
AsuHPI GGTGA 2 cut(s) 16, 435
AvaII GGWCC 1 cut(s) 171
BbsI GAAGAC 1 cut(s) 412
Bbv12I GWGCWC 1 cut(s) 316
BccI CCATC 1 cut(s) 204
BceAI ACGGC 2 cut(s) 311, 326
BcoDI GTCTC 1 cut(s) 212
BfoI RGCGCY 1 cut(s) 234
Bme18I GGWCC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 171
BmsI GCATC 2 cut(s) 4, 449
BpiI GAAGAC 1 cut(s) 412
BpuEI CTTGAG 1 cut(s) 542
Bsc4I CCNNNNNNNGG 1 cut(s) 294
Bse3DI GCAATG 1 cut(s) 532
BseGI GGATG 1 cut(s) 196
BseLI CCNNNNNNNGG 1 cut(s) 294
BseMI GCAATG 1 cut(s) 532
BseRI GAGGAG 2 cut(s) 200, 545
BshFI GGCC 2 cut(s) 131, 183
BsiHKAI GWGCWC 1 cut(s) 316
BslFI GGGAC 1 cut(s) 58
BslI CCNNNNNNNGG 1 cut(s) 294
BsmAI GTCTC 1 cut(s) 212
BsmFI GGGAC 1 cut(s) 58
BsnI GGCC 2 cut(s) 131, 183
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 3 cut(s) 36, 133, 222
BspANI GGCC 2 cut(s) 131, 183
BspHI TCATGA 1 cut(s) 456
BspPI GGATC 2 cut(s) 44, 128
BspQI GCTCTTC 1 cut(s) 321
BsrDI GCAATG 1 cut(s) 532
BssMI GATC 3 cut(s) 36, 133, 222
Bst4CI ACNGT 2 cut(s) 28, 454
Bst6I CTCTTC 1 cut(s) 321
BstC8I GCNNGC 2 cut(s) 235, 513
BstF5I GGATG 1 cut(s) 196
BstH2I RGCGCY 1 cut(s) 234
BstHHI GCGC 1 cut(s) 233
BstKTI GATC 3 cut(s) 39, 136, 225
BstMAI GTCTC 1 cut(s) 212
BstMBI GATC 3 cut(s) 36, 133, 222
BstNSI RCATGY 1 cut(s) 496
BstV2I GAAGAC 1 cut(s) 412
BsuRI GGCC 2 cut(s) 131, 183
BtsCI GGATG 1 cut(s) 196
BtsIMutI CAGTG 1 cut(s) 316
Cac8I GCNNGC 2 cut(s) 235, 513
CciI TCATGA 1 cut(s) 456
CfoI GCGC 1 cut(s) 233
Cfr13I GGNCC 1 cut(s) 171
Csp6I GTAC 1 cut(s) 490
CviAII CATG 2 cut(s) 457, 493
CviJI RGCY 4 cut(s) 63, 131, 183, 237
CviKI_1 RGCY 4 cut(s) 63, 131, 183, 237
CviQI GTAC 1 cut(s) 490
DpnI GATC 3 cut(s) 38, 135, 224
DpnII GATC 3 cut(s) 36, 133, 222
Eam1104I CTCTTC 1 cut(s) 321
EarI CTCTTC 1 cut(s) 321
Eco47I GGWCC 1 cut(s) 171
EcoT22I ATGCAT 1 cut(s) 442
FaeI CATG 2 cut(s) 460, 496
FaqI GGGAC 1 cut(s) 58
FatI CATG 2 cut(s) 456, 492
FokI GGATG 1 cut(s) 183
GlaI GCGC 1 cut(s) 232
HaeII RGCGCY 1 cut(s) 234
HaeIII GGCC 2 cut(s) 131, 183
HhaI GCGC 1 cut(s) 233
Hin1II CATG 2 cut(s) 460, 496
Hin6I GCGC 1 cut(s) 231
HinP1I GCGC 1 cut(s) 231
HphI GGTGA 2 cut(s) 16, 435
Hpy166II GTNNAC 2 cut(s) 7, 69
Hpy188III TCNNGA 3 cut(s) 200, 457, 472
Hpy8I GTNNAC 2 cut(s) 7, 69
HpyAV CCTTC 1 cut(s) 194
HpyCH4III ACNGT 2 cut(s) 28, 454
HpyCH4IV ACGT 2 cut(s) 71, 366
HpyCH4V TGCA 3 cut(s) 440, 525, 551
HpySE526I ACGT 2 cut(s) 71, 366
Hsp92II CATG 2 cut(s) 460, 496
HspAI GCGC 1 cut(s) 231
Kzo9I GATC 3 cut(s) 36, 133, 222
LguI GCTCTTC 1 cut(s) 321
LpnPI CCDG 6 cut(s) 213, 219, 297, 305, 373, 523
LweI GCATC 2 cut(s) 4, 449
MaeII ACGT 2 cut(s) 71, 366
MaeIII GTNAC 1 cut(s) 217
MalI GATC 3 cut(s) 38, 135, 224
MboI GATC 3 cut(s) 36, 133, 222
MboII GAAGA 3 cut(s) 232, 308, 412
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 3 cut(s) 99, 157, 399
MmeI TCCRAC 1 cut(s) 97
MnlI CCTC 3 cut(s) 221, 515, 566
Mph1103I ATGCAT 1 cut(s) 442
MseI TTAA 3 cut(s) 102, 156, 449
MslI CAYNNNNRTG 1 cut(s) 461
NdeII GATC 3 cut(s) 36, 133, 222
NlaIII CATG 2 cut(s) 460, 496
NsiI ATGCAT 1 cut(s) 442
NspI RCATGY 1 cut(s) 496
PagI TCATGA 1 cut(s) 456
PciSI GCTCTTC 1 cut(s) 321
PspPI GGNCC 1 cut(s) 171
RsaI GTAC 1 cut(s) 491
RsaNI GTAC 1 cut(s) 490
RseI CAYNNNNRTG 1 cut(s) 461
SapI GCTCTTC 1 cut(s) 321
SaqAI TTAA 3 cut(s) 102, 156, 449
Sau3AI GATC 3 cut(s) 36, 133, 222
Sau96I GGNCC 1 cut(s) 171
SduI GDGCHC 1 cut(s) 316
SetI ASST 3 cut(s) 74, 369, 392
SfaNI GCATC 2 cut(s) 4, 449
SinI GGWCC 1 cut(s) 171
SmiMI CAYNNNNRTG 1 cut(s) 461
SmlI CTYRAG 1 cut(s) 557
SmoI CTYRAG 1 cut(s) 557
Sse9I AATT 3 cut(s) 99, 157, 399
TaaI ACNGT 2 cut(s) 28, 454
TaiI ACGT 2 cut(s) 74, 369
TaqI TCGA 1 cut(s) 246
TasI AATT 3 cut(s) 99, 157, 399
TatI WGTACW 1 cut(s) 489
Tru1I TTAA 3 cut(s) 102, 156, 449
Tru9I TTAA 3 cut(s) 102, 156, 449
TscAI CASTG 1 cut(s) 316
TspDTI ATGAA 2 cut(s) 232, 473
TspRI CASTG 1 cut(s) 316
VpaK11BI GGWCC 1 cut(s) 171
XceI RCATGY 1 cut(s) 496
Zsp2I ATGCAT 1 cut(s) 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.