Isochorismatase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16190 |
| fragaria_vesca | FvH4_6g31890 FvH4_6g31890 |
| malus_domestica | MD09G1208600.v1.1 |
| prunus_persica | Prupe.3G064800_v2.0.a1 |
| pyrus_communis | pycom09g12470 |
| rosa_chinensis | RchiOBHm_Chr2g0139241 RchiOBHm_Chr2g0139251 |
| rosa_laevigata | RLG00000019564 RLG00000019710 RLG00000019798 RLG00000019799 |
| rosa_multiflora | Rmu_sc0001803.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00105530 |
| rosa_rugosa | Rorug02G0355800 Rorug02G0355900 Rorug02G0356000 |
| rosa_samantha | Rh2AG405900 Rh2BG416500 Rh2BG416600 Rh2CG392100 Rh2CG392200 Rh2DG425700 |
| rosa_wichuraiana | Rw2G032890 Rw2G032900 Rw2G033160 Rw2G033170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 306 |
| AciI | CCGC | 1 cut(s) | 208 |
| AcuI | CTGAAG | 1 cut(s) | 522 |
| AfaI | GTAC | 1 cut(s) | 507 |
| AflII | CTTAAG | 1 cut(s) | 362 |
| AgsI | TTSAA | 2 cut(s) | 128, 293 |
| AluBI | AGCT | 4 cut(s) | 26, 202, 446, 488 |
| AluI | AGCT | 4 cut(s) | 26, 202, 446, 488 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 491 |
| AoxI | GGCC | 1 cut(s) | 120 |
| ApeKI | GCWGC | 5 cut(s) | 46, 139, 488, 491, 512 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 87, 119 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 273 |
| AspS9I | GGNCC | 2 cut(s) | 71, 239 |
| AvaII | GGWCC | 2 cut(s) | 71, 239 |
| BbvI | GCAGC | 5 cut(s) | 58, 151, 475, 478, 499 |
| BccI | CCATC | 2 cut(s) | 62, 431 |
| BceAI | ACGGC | 1 cut(s) | 107 |
| BfaI | CTAG | 2 cut(s) | 80, 185 |
| BfrI | CTTAAG | 1 cut(s) | 362 |
| BisI | GCNGC | 5 cut(s) | 47, 140, 489, 492, 513 |
| BlsI | GCNGC | 5 cut(s) | 48, 141, 490, 493, 514 |
| Bme18I | GGWCC | 2 cut(s) | 71, 239 |
| BmgT120I | GGNCC | 2 cut(s) | 71, 239 |
| BmsI | GCATC | 1 cut(s) | 469 |
| Bse118I | RCCGGY | 1 cut(s) | 210 |
| Bse1I | ACTGG | 1 cut(s) | 400 |
| BseGI | GGATG | 1 cut(s) | 73 |
| BseNI | ACTGG | 1 cut(s) | 400 |
| BseXI | GCAGC | 5 cut(s) | 58, 151, 475, 478, 499 |
| BseYI | CCCAGC | 1 cut(s) | 227 |
| BshFI | GGCC | 1 cut(s) | 122 |
| BsiSI | CCGG | 1 cut(s) | 211 |
| BslFI | GGGAC | 1 cut(s) | 89 |
| BsmFI | GGGAC | 1 cut(s) | 89 |
| BsmI | GAATGC | 1 cut(s) | 332 |
| BsnI | GGCC | 1 cut(s) | 122 |
| BspACI | CCGC | 1 cut(s) | 208 |
| BspANI | GGCC | 1 cut(s) | 122 |
| BspTI | CTTAAG | 1 cut(s) | 362 |
| BsrFI | RCCGGY | 1 cut(s) | 210 |
| BsrI | ACTGG | 1 cut(s) | 400 |
| BssAI | RCCGGY | 1 cut(s) | 210 |
| Bst4CI | ACNGT | 5 cut(s) | 247, 324, 383, 430, 469 |
| Bst6I | CTCTTC | 1 cut(s) | 184 |
| BstAFI | CTTAAG | 1 cut(s) | 362 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 338 |
| BstC8I | GCNNGC | 2 cut(s) | 149, 212 |
| BstF5I | GGATG | 1 cut(s) | 73 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 148, 338, 488 |
| BstNSI | RCATGY | 2 cut(s) | 46, 151 |
| BstV1I | GCAGC | 5 cut(s) | 58, 151, 475, 478, 499 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 523 |
| BsuRI | GGCC | 1 cut(s) | 122 |
| BtsCI | GGATG | 1 cut(s) | 73 |
| BtsIMutI | CAGTG | 2 cut(s) | 91, 393 |
| Cac8I | GCNNGC | 2 cut(s) | 149, 212 |
| CaiI | CAGNNNCTG | 1 cut(s) | 491 |
| Cfr10I | RCCGGY | 1 cut(s) | 210 |
| Cfr13I | GGNCC | 2 cut(s) | 71, 239 |
| Csp6I | GTAC | 1 cut(s) | 506 |
| CviAII | CATG | 6 cut(s) | 43, 50, 148, 176, 278, 529 |
| CviJI | RGCY | 6 cut(s) | 26, 122, 202, 283, 446, 488 |
| CviKI_1 | RGCY | 6 cut(s) | 26, 122, 202, 283, 446, 488 |
| CviQI | GTAC | 1 cut(s) | 506 |
| Eam1104I | CTCTTC | 1 cut(s) | 184 |
| EarI | CTCTTC | 1 cut(s) | 184 |
| EciI | GGCGGA | 1 cut(s) | 197 |
| Eco47I | GGWCC | 2 cut(s) | 71, 239 |
| Eco57I | CTGAAG | 1 cut(s) | 522 |
| FaeI | CATG | 6 cut(s) | 46, 53, 151, 179, 281, 532 |
| FaqI | GGGAC | 1 cut(s) | 89 |
| FatI | CATG | 6 cut(s) | 42, 49, 147, 175, 277, 528 |
| Fnu4HI | GCNGC | 5 cut(s) | 47, 140, 489, 492, 513 |
| FokI | GGATG | 1 cut(s) | 80 |
| Fsp4HI | GCNGC | 5 cut(s) | 47, 140, 489, 492, 513 |
| FspBI | CTAG | 2 cut(s) | 80, 185 |
| GluI | GCNGC | 5 cut(s) | 47, 140, 489, 492, 513 |
| GsaI | CCCAGC | 1 cut(s) | 231 |
| HaeIII | GGCC | 1 cut(s) | 122 |
| HapII | CCGG | 1 cut(s) | 211 |
| Hin1II | CATG | 6 cut(s) | 46, 53, 151, 179, 281, 532 |
| HinfI | GANTC | 4 cut(s) | 289, 353, 406, 575 |
| HpaII | CCGG | 1 cut(s) | 211 |
| Hpy166II | GTNNAC | 2 cut(s) | 173, 508 |
| Hpy188I | TCNGA | 2 cut(s) | 405, 580 |
| Hpy188III | TCNNGA | 4 cut(s) | 293, 316, 350, 476 |
| Hpy8I | GTNNAC | 2 cut(s) | 173, 508 |
| HpyAV | CCTTC | 2 cut(s) | 226, 290 |
| HpyCH4III | ACNGT | 5 cut(s) | 247, 324, 383, 430, 469 |
| HpyCH4V | TGCA | 4 cut(s) | 46, 332, 417, 548 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 148, 338, 488 |
| Hsp92II | CATG | 6 cut(s) | 46, 53, 151, 179, 281, 532 |
| KroI | GCCGGC | 1 cut(s) | 210 |
| KroNI | GCCGGC | 1 cut(s) | 212 |
| LpnPI | CCDG | 6 cut(s) | 213, 224, 237, 357, 381, 513 |
| Lsp1109I | GCAGC | 5 cut(s) | 58, 151, 475, 478, 499 |
| LweI | GCATC | 1 cut(s) | 469 |
| MaeI | CTAG | 2 cut(s) | 80, 185 |
| MaeIII | GTNAC | 2 cut(s) | 391, 463 |
| MboII | GAAGA | 2 cut(s) | 201, 544 |
| MluCI | AATT | 2 cut(s) | 36, 375 |
| MlyI | GAGTC | 1 cut(s) | 400 |
| MmeI | TCCRAC | 1 cut(s) | 266 |
| MnlI | CCTC | 1 cut(s) | 83 |
| MroNI | GCCGGC | 1 cut(s) | 210 |
| MroXI | GAANNNNTTC | 1 cut(s) | 273 |
| MseI | TTAA | 2 cut(s) | 249, 363 |
| MspA1I | CMGCKG | 1 cut(s) | 488 |
| MspCI | CTTAAG | 1 cut(s) | 362 |
| MspI | CCGG | 1 cut(s) | 211 |
| Mva1269I | GAATGC | 1 cut(s) | 332 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 148, 338, 488 |
| NaeI | GCCGGC | 1 cut(s) | 212 |
| NgoMIV | GCCGGC | 1 cut(s) | 210 |
| NlaIII | CATG | 6 cut(s) | 46, 53, 151, 179, 281, 532 |
| NmuCI | GTSAC | 1 cut(s) | 391 |
| NspI | RCATGY | 2 cut(s) | 46, 151 |
| PaeI | GCATGC | 1 cut(s) | 151 |
| PctI | GAATGC | 1 cut(s) | 332 |
| PdiI | GCCGGC | 1 cut(s) | 212 |
| PdmI | GAANNNNTTC | 1 cut(s) | 273 |
| PfeI | GAWTC | 3 cut(s) | 289, 353, 575 |
| PkrI | GCNGC | 5 cut(s) | 48, 141, 490, 493, 514 |
| PleI | GAGTC | 1 cut(s) | 400 |
| PpsI | GAGTC | 1 cut(s) | 400 |
| PsiI | TTATAA | 1 cut(s) | 306 |
| PspFI | CCCAGC | 1 cut(s) | 227 |
| PspPI | GGNCC | 2 cut(s) | 71, 239 |
| PstNI | CAGNNNCTG | 1 cut(s) | 491 |
| PvuII | CAGCTG | 1 cut(s) | 488 |
| RsaI | GTAC | 1 cut(s) | 507 |
| RsaNI | GTAC | 1 cut(s) | 506 |
| SaqAI | TTAA | 2 cut(s) | 249, 363 |
| SatI | GCNGC | 5 cut(s) | 47, 140, 489, 492, 513 |
| Sau96I | GGNCC | 2 cut(s) | 71, 239 |
| SchI | GAGTC | 1 cut(s) | 400 |
| SetI | ASST | 7 cut(s) | 28, 204, 237, 448, 490, 502, 560 |
| SfaNI | GCATC | 1 cut(s) | 469 |
| SinI | GGWCC | 2 cut(s) | 71, 239 |
| SmlI | CTYRAG | 1 cut(s) | 362 |
| SmoI | CTYRAG | 1 cut(s) | 362 |
| SphI | GCATGC | 1 cut(s) | 151 |
| Sse9I | AATT | 2 cut(s) | 36, 375 |
| SsiI | CCGC | 1 cut(s) | 208 |
| SspMI | CTAG | 2 cut(s) | 80, 185 |
| TaaI | ACNGT | 5 cut(s) | 247, 324, 383, 430, 469 |
| TasI | AATT | 2 cut(s) | 36, 375 |
| TatI | WGTACW | 1 cut(s) | 505 |
| TfiI | GAWTC | 3 cut(s) | 289, 353, 575 |
| Tru1I | TTAA | 2 cut(s) | 249, 363 |
| Tru9I | TTAA | 2 cut(s) | 249, 363 |
| TscAI | CASTG | 2 cut(s) | 91, 400 |
| TseFI | GTSAC | 1 cut(s) | 391 |
| TseI | GCWGC | 5 cut(s) | 46, 139, 488, 491, 512 |
| Tsp45I | GTSAC | 1 cut(s) | 391 |
| TspDTI | ATGAA | 3 cut(s) | 266, 345, 545 |
| TspRI | CASTG | 2 cut(s) | 91, 400 |
| Vha464I | CTTAAG | 1 cut(s) | 362 |
| VpaK11BI | GGWCC | 2 cut(s) | 71, 239 |
| XceI | RCATGY | 2 cut(s) | 46, 151 |
| XmnI | GAANNNNTTC | 1 cut(s) | 273 |
| XspI | CTAG | 2 cut(s) | 80, 185 |