Isochorismatase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16190 |
| fragaria_vesca | FvH4_6g31890 FvH4_6g31890 |
| malus_domestica | MD09G1208600.v1.1 |
| prunus_persica | Prupe.3G064800_v2.0.a1 |
| pyrus_communis | pycom09g12470 |
| rosa_chinensis | RchiOBHm_Chr2g0139241 RchiOBHm_Chr2g0139251 |
| rosa_laevigata | RLG00000019564 RLG00000019710 RLG00000019798 RLG00000019799 |
| rosa_multiflora | Rmu_sc0001803.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00105530 |
| rosa_rugosa | Rorug02G0355800 Rorug02G0355900 Rorug02G0356000 |
| rosa_samantha | Rh2AG405900 Rh2BG416500 Rh2BG416600 Rh2CG392100 Rh2CG392200 Rh2DG425700 |
| rosa_wichuraiana | Rw2G032890 Rw2G032900 Rw2G033160 Rw2G033170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 486 |
| AclWI | GGATC | 1 cut(s) | 170 |
| AcyI | GRCGYC | 1 cut(s) | 477 |
| AgsI | TTSAA | 2 cut(s) | 149, 290 |
| AluBI | AGCT | 2 cut(s) | 23, 199 |
| AluI | AGCT | 2 cut(s) | 23, 199 |
| AlwI | GGATC | 1 cut(s) | 170 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 488 |
| AoxI | GGCC | 2 cut(s) | 117, 236 |
| ApeKI | GCWGC | 3 cut(s) | 43, 136, 488 |
| AspS9I | GGNCC | 2 cut(s) | 68, 236 |
| AsuC2I | CCSGG | 1 cut(s) | 319 |
| AsuHPI | GGTGA | 1 cut(s) | 263 |
| AvaII | GGWCC | 1 cut(s) | 68 |
| BbvI | GCAGC | 3 cut(s) | 55, 148, 475 |
| BccI | CCATC | 2 cut(s) | 269, 428 |
| BceAI | ACGGC | 1 cut(s) | 104 |
| BcnI | CCSGG | 1 cut(s) | 319 |
| BfaI | CTAG | 2 cut(s) | 132, 182 |
| BisI | GCNGC | 4 cut(s) | 44, 137, 486, 489 |
| BlsI | GCNGC | 4 cut(s) | 45, 138, 487, 490 |
| Bme1390I | CCNGG | 1 cut(s) | 319 |
| Bme18I | GGWCC | 1 cut(s) | 68 |
| BmgT120I | GGNCC | 2 cut(s) | 68, 236 |
| BmrFI | CCNGG | 1 cut(s) | 319 |
| BpuEI | CTTGAG | 1 cut(s) | 344 |
| BpuMI | CCSGG | 1 cut(s) | 319 |
| BsaHI | GRCGYC | 1 cut(s) | 477 |
| Bse118I | RCCGGY | 1 cut(s) | 207 |
| Bse1I | ACTGG | 1 cut(s) | 397 |
| BseNI | ACTGG | 1 cut(s) | 397 |
| BseXI | GCAGC | 3 cut(s) | 55, 148, 475 |
| BshFI | GGCC | 2 cut(s) | 119, 238 |
| BsiSI | CCGG | 3 cut(s) | 208, 221, 319 |
| BslFI | GGGAC | 1 cut(s) | 311 |
| BsmFI | GGGAC | 1 cut(s) | 311 |
| BsmI | GAATGC | 1 cut(s) | 329 |
| BsnI | GGCC | 2 cut(s) | 119, 238 |
| Bsp143I | GATC | 1 cut(s) | 175 |
| BspACI | CCGC | 1 cut(s) | 486 |
| BspANI | GGCC | 2 cut(s) | 119, 238 |
| BspPI | GGATC | 1 cut(s) | 170 |
| BsrFI | RCCGGY | 1 cut(s) | 207 |
| BsrI | ACTGG | 1 cut(s) | 397 |
| BssAI | RCCGGY | 1 cut(s) | 207 |
| BssMI | GATC | 1 cut(s) | 175 |
| BssNI | GRCGYC | 1 cut(s) | 477 |
| Bst4CI | ACNGT | 4 cut(s) | 244, 380, 427, 466 |
| Bst6I | CTCTTC | 1 cut(s) | 181 |
| BstACI | GRCGYC | 1 cut(s) | 477 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 335 |
| BstC8I | GCNNGC | 1 cut(s) | 209 |
| BstKTI | GATC | 1 cut(s) | 178 |
| BstMBI | GATC | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 335, 485 |
| BstNSI | RCATGY | 1 cut(s) | 43 |
| BstSCI | CCNGG | 1 cut(s) | 317 |
| BstV1I | GCAGC | 3 cut(s) | 55, 148, 475 |
| BsuRI | GGCC | 2 cut(s) | 119, 238 |
| BtsIMutI | CAGTG | 1 cut(s) | 390 |
| Cac8I | GCNNGC | 1 cut(s) | 209 |
| CaiI | CAGNNNCTG | 1 cut(s) | 488 |
| Cfr10I | RCCGGY | 1 cut(s) | 207 |
| Cfr13I | GGNCC | 2 cut(s) | 68, 236 |
| CseI | GACGC | 1 cut(s) | 485 |
| CviAII | CATG | 3 cut(s) | 40, 47, 173 |
| CviJI | RGCY | 7 cut(s) | 23, 65, 95, 119, 199, 238, 485 |
| CviKI_1 | RGCY | 7 cut(s) | 23, 65, 95, 119, 199, 238, 485 |
| DpnI | GATC | 1 cut(s) | 177 |
| DpnII | GATC | 1 cut(s) | 175 |
| Eam1104I | CTCTTC | 1 cut(s) | 181 |
| EarI | CTCTTC | 1 cut(s) | 181 |
| Eco47I | GGWCC | 1 cut(s) | 68 |
| FaeI | CATG | 3 cut(s) | 43, 50, 176 |
| FaiI | YATR | 8 cut(s) | 41, 48, 74, 98, 174, 217, 503, 515 |
| FaqI | GGGAC | 1 cut(s) | 311 |
| FatI | CATG | 3 cut(s) | 39, 46, 172 |
| Fnu4HI | GCNGC | 4 cut(s) | 44, 137, 486, 489 |
| Fsp4HI | GCNGC | 4 cut(s) | 44, 137, 486, 489 |
| FspBI | CTAG | 2 cut(s) | 132, 182 |
| GluI | GCNGC | 4 cut(s) | 44, 137, 486, 489 |
| HaeIII | GGCC | 2 cut(s) | 119, 238 |
| HapII | CCGG | 3 cut(s) | 208, 221, 319 |
| HgaI | GACGC | 1 cut(s) | 485 |
| Hin1I | GRCGYC | 1 cut(s) | 477 |
| Hin1II | CATG | 3 cut(s) | 43, 50, 176 |
| HinfI | GANTC | 2 cut(s) | 350, 403 |
| HpaII | CCGG | 3 cut(s) | 208, 221, 319 |
| HphI | GGTGA | 1 cut(s) | 263 |
| Hpy166II | GTNNAC | 1 cut(s) | 170 |
| Hpy188I | TCNGA | 1 cut(s) | 402 |
| Hpy188III | TCNNGA | 2 cut(s) | 369, 473 |
| Hpy8I | GTNNAC | 1 cut(s) | 170 |
| HpyCH4III | ACNGT | 4 cut(s) | 244, 380, 427, 466 |
| HpyCH4V | TGCA | 3 cut(s) | 43, 329, 414 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 335, 485 |
| Hsp92I | GRCGYC | 1 cut(s) | 477 |
| Hsp92II | CATG | 3 cut(s) | 43, 50, 176 |
| KroI | GCCGGC | 1 cut(s) | 207 |
| KroNI | GCCGGC | 1 cut(s) | 209 |
| Kzo9I | GATC | 1 cut(s) | 175 |
| Lsp1109I | GCAGC | 3 cut(s) | 55, 148, 475 |
| MaeI | CTAG | 2 cut(s) | 132, 182 |
| MaeIII | GTNAC | 2 cut(s) | 388, 460 |
| MalI | GATC | 1 cut(s) | 177 |
| MboI | GATC | 1 cut(s) | 175 |
| MboII | GAAGA | 1 cut(s) | 198 |
| MluCI | AATT | 2 cut(s) | 372, 409 |
| MlyI | GAGTC | 1 cut(s) | 397 |
| MnlI | CCTC | 3 cut(s) | 80, 251, 356 |
| MroNI | GCCGGC | 1 cut(s) | 207 |
| MseI | TTAA | 3 cut(s) | 81, 246, 312 |
| MslI | CAYNNNNRTG | 2 cut(s) | 38, 59 |
| MspA1I | CMGCKG | 1 cut(s) | 488 |
| MspI | CCGG | 3 cut(s) | 208, 221, 319 |
| MspR9I | CCNGG | 1 cut(s) | 319 |
| Mva1269I | GAATGC | 1 cut(s) | 329 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 335, 485 |
| NaeI | GCCGGC | 1 cut(s) | 209 |
| NciI | CCSGG | 1 cut(s) | 319 |
| NdeII | GATC | 1 cut(s) | 175 |
| NgoMIV | GCCGGC | 1 cut(s) | 207 |
| NlaIII | CATG | 3 cut(s) | 43, 50, 176 |
| NmuCI | GTSAC | 1 cut(s) | 388 |
| NspI | RCATGY | 1 cut(s) | 43 |
| PctI | GAATGC | 1 cut(s) | 329 |
| PdiI | GCCGGC | 1 cut(s) | 209 |
| PfeI | GAWTC | 1 cut(s) | 350 |
| PkrI | GCNGC | 4 cut(s) | 45, 138, 487, 490 |
| PleI | GAGTC | 1 cut(s) | 397 |
| PpsI | GAGTC | 1 cut(s) | 397 |
| PspPI | GGNCC | 2 cut(s) | 68, 236 |
| PstNI | CAGNNNCTG | 1 cut(s) | 488 |
| RseI | CAYNNNNRTG | 2 cut(s) | 38, 59 |
| SaqAI | TTAA | 3 cut(s) | 81, 246, 312 |
| SatI | GCNGC | 4 cut(s) | 44, 137, 486, 489 |
| Sau3AI | GATC | 1 cut(s) | 175 |
| Sau96I | GGNCC | 2 cut(s) | 68, 236 |
| SchI | GAGTC | 1 cut(s) | 397 |
| ScrFI | CCNGG | 1 cut(s) | 319 |
| SetI | ASST | 5 cut(s) | 25, 201, 262, 348, 499 |
| SinI | GGWCC | 1 cut(s) | 68 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 38, 59 |
| SmlI | CTYRAG | 1 cut(s) | 359 |
| SmoI | CTYRAG | 1 cut(s) | 359 |
| Sse9I | AATT | 2 cut(s) | 372, 409 |
| SsiI | CCGC | 1 cut(s) | 486 |
| SspMI | CTAG | 2 cut(s) | 132, 182 |
| StyD4I | CCNGG | 1 cut(s) | 317 |
| TaaI | ACNGT | 4 cut(s) | 244, 380, 427, 466 |
| TaqI | TCGA | 1 cut(s) | 348 |
| TasI | AATT | 2 cut(s) | 372, 409 |
| TauI | GCSGC | 1 cut(s) | 488 |
| TfiI | GAWTC | 1 cut(s) | 350 |
| Tru1I | TTAA | 3 cut(s) | 81, 246, 312 |
| Tru9I | TTAA | 3 cut(s) | 81, 246, 312 |
| TscAI | CASTG | 1 cut(s) | 397 |
| TseFI | GTSAC | 1 cut(s) | 388 |
| TseI | GCWGC | 3 cut(s) | 43, 136, 488 |
| Tsp45I | GTSAC | 1 cut(s) | 388 |
| TspDTI | ATGAA | 1 cut(s) | 43 |
| TspRI | CASTG | 1 cut(s) | 397 |
| VpaK11BI | GGWCC | 1 cut(s) | 68 |
| XceI | RCATGY | 1 cut(s) | 43 |
| XspI | CTAG | 2 cut(s) | 132, 182 |