Prupe.3G207000_v2.0.a1

Mitochondrial pyruvate carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0005603
Physical Location & Seq
Reverse (-)
21374021 .. 21375477
1457 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G207000.1

Sequence Viewer

Length: 357 bp
ATGGCAAATTCTAAGCTGCAAGCAATTTGGAACCACCCAGCCGGCCCGAAAACTATCCATTTTTGGGCTCCAACTTTTAAATGGGGCGTAAGCATTGCCAATATTATCGACTCTTCAAAACCACCTGAGCAACTCTCCTACGTTCAGCAATCAGCCCTTACATGCAATGGACTTATATGGGCAAGAAACAGCTTAATAATTACACCAAAGAACTGGAATCTTTTCAGTGTCAGTATTGGGATGGCTGCAACTTCCCTGTTTCAACTTTCACGTAAAATTCAGCATGACTTATCTCCCAAAAACCAACAAGCTGCTGAAAAGAAAAATGAAGAACATCACTTCATCAACTTATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MPC

Protein Analysis

119

Amino Acids

13.31

Weight (kDa)

9.67

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 7, 276
AfiI CCNNNNNNNGG 1 cut(s) 64
AgsI TTSAA 2 cut(s) 117, 263
AluBI AGCT 3 cut(s) 16, 192, 311
AluI AGCT 3 cut(s) 16, 192, 311
AoxI GGCC 1 cut(s) 43
ApeKI GCWGC 3 cut(s) 16, 245, 311
ApoI RAATTY 2 cut(s) 7, 276
Asp700I GAANNNNTTC 1 cut(s) 221
AspS9I GGNCC 1 cut(s) 44
BanII GRGCYC 1 cut(s) 70
BbvI GCAGC 3 cut(s) 3, 232, 298
BccI CCATC 1 cut(s) 235
BisI GCNGC 3 cut(s) 17, 246, 312
BlsI GCNGC 3 cut(s) 18, 247, 313
BmgT120I GGNCC 1 cut(s) 44
BmiI GGNNCC 2 cut(s) 32, 69
BplI GAGNNNNNCTC 2 cut(s) 119, 151
Bpu10I CCTNAGC 1 cut(s) 126
BsaAI YACGTR 1 cut(s) 272
Bsc4I CCNNNNNNNGG 1 cut(s) 64
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 218
Bse3DI GCAATG 2 cut(s) 93, 172
BseGI GGATG 1 cut(s) 246
BseLI CCNNNNNNNGG 1 cut(s) 64
BseMI GCAATG 2 cut(s) 93, 172
BseMII CTCAG 1 cut(s) 117
BseNI ACTGG 1 cut(s) 218
BseXI GCAGC 3 cut(s) 3, 232, 298
BseYI CCCAGC 1 cut(s) 37
BshFI GGCC 1 cut(s) 45
BsiSI CCGG 1 cut(s) 42
BslI CCNNNNNNNGG 1 cut(s) 64
BsnI GGCC 1 cut(s) 45
Bsp1286I GDGCHC 1 cut(s) 70
BspANI GGCC 1 cut(s) 45
BspCNI CTCAG 1 cut(s) 118
BspLI GGNNCC 2 cut(s) 32, 69
BsrDI GCAATG 2 cut(s) 93, 172
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 41
Bst6I CTCTTC 1 cut(s) 118
BstBAI YACGTR 1 cut(s) 272
BstC8I GCNNGC 2 cut(s) 21, 43
BstDEI CTNAG 2 cut(s) 12, 126
BstF5I GGATG 1 cut(s) 246
BstNSI RCATGY 1 cut(s) 165
BstV1I GCAGC 3 cut(s) 3, 232, 298
BstXI CCANNNNNNTGG 1 cut(s) 213
BsuRI GGCC 1 cut(s) 45
BtsCI GGATG 1 cut(s) 246
BtsIMutI CAGTG 1 cut(s) 232
Cac8I GCNNGC 2 cut(s) 21, 43
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 1 cut(s) 44
CviAII CATG 2 cut(s) 162, 284
CviJI RGCY 8 cut(s) 16, 41, 45, 68, 155, 192, 245, 311
CviKI_1 RGCY 8 cut(s) 16, 41, 45, 68, 155, 192, 245, 311
DdeI CTNAG 2 cut(s) 12, 126
DraI TTTAAA 1 cut(s) 79
Eam1104I CTCTTC 1 cut(s) 118
EarI CTCTTC 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 70
EcoT38I GRGCYC 1 cut(s) 70
FaeI CATG 2 cut(s) 165, 287
FaiI YATR 5 cut(s) 163, 176, 178, 285, 355
FatI CATG 2 cut(s) 161, 283
Fnu4HI GCNGC 3 cut(s) 17, 246, 312
FokI GGATG 1 cut(s) 253
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 3 cut(s) 17, 246, 312
GluI GCNGC 3 cut(s) 17, 246, 312
GsaI CCCAGC 1 cut(s) 41
HaeIII GGCC 1 cut(s) 45
HapII CCGG 1 cut(s) 42
Hin1II CATG 2 cut(s) 165, 287
HinfI GANTC 2 cut(s) 110, 217
HpaII CCGG 1 cut(s) 42
HpyCH4IV ACGT 2 cut(s) 141, 271
HpyCH4V TGCA 3 cut(s) 19, 165, 248
HpyF3I CTNAG 2 cut(s) 12, 126
HpySE526I ACGT 2 cut(s) 141, 271
Hsp92II CATG 2 cut(s) 165, 287
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
LmnI GCTCC 1 cut(s) 73
LpnPI CCDG 5 cut(s) 51, 55, 138, 199, 269
Lsp1109I GCAGC 3 cut(s) 3, 232, 298
MaeII ACGT 2 cut(s) 141, 271
MboII GAAGA 2 cut(s) 105, 341
MhlI GDGCHC 1 cut(s) 70
MluCI AATT 4 cut(s) 7, 24, 198, 276
MlyI GAGTC 1 cut(s) 104
MmeI TCCRAC 1 cut(s) 95
MroNI GCCGGC 1 cut(s) 41
MroXI GAANNNNTTC 1 cut(s) 221
MseI TTAA 2 cut(s) 78, 194
MspI CCGG 1 cut(s) 42
NaeI GCCGGC 1 cut(s) 43
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 2 cut(s) 165, 287
NlaIV GGNNCC 2 cut(s) 32, 69
NspI RCATGY 1 cut(s) 165
PdiI GCCGGC 1 cut(s) 43
PdmI GAANNNNTTC 1 cut(s) 221
PfeI GAWTC 1 cut(s) 217
PkrI GCNGC 3 cut(s) 18, 247, 313
PleI GAGTC 1 cut(s) 104
PpsI GAGTC 1 cut(s) 104
Ppu21I YACGTR 1 cut(s) 272
PspFI CCCAGC 1 cut(s) 37
PspN4I GGNNCC 2 cut(s) 32, 69
PspPI GGNCC 1 cut(s) 44
SaqAI TTAA 2 cut(s) 78, 194
SatI GCNGC 3 cut(s) 17, 246, 312
Sau96I GGNCC 1 cut(s) 44
SchI GAGTC 1 cut(s) 104
SduI GDGCHC 1 cut(s) 70
SetI ASST 6 cut(s) 18, 127, 144, 194, 274, 313
Sse9I AATT 4 cut(s) 7, 24, 198, 276
SspI AATATT 1 cut(s) 103
TaiI ACGT 2 cut(s) 144, 274
TaqI TCGA 1 cut(s) 108
TasI AATT 4 cut(s) 7, 24, 198, 276
TfiI GAWTC 1 cut(s) 217
Tru1I TTAA 2 cut(s) 78, 194
Tru9I TTAA 2 cut(s) 78, 194
TscAI CASTG 1 cut(s) 232
TseI GCWGC 3 cut(s) 16, 245, 311
TspDTI ATGAA 2 cut(s) 331, 342
TspRI CASTG 1 cut(s) 232
XapI RAATTY 2 cut(s) 7, 276
XceI RCATGY 1 cut(s) 165
XcmI CCANNNNNNNNNTGG 1 cut(s) 78
XmnI GAANNNNTTC 1 cut(s) 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.