Prupe.3G207600_v2.0.a1

Mitochondrial pyruvate carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0005603
Physical Location & Seq
Reverse (-)
21402630 .. 21405381
2752 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G207600.1

Sequence Viewer

Length: 330 bp
ATGGCAAATTCTAAGCTGCAAGCAATTTGGAACCACCCAGCCGGCCCAAAAACTATTCATTTTTGGGCCCCAACTTTTAAATGGGGTCTAACCATTGCAAATATTCTTGACTCCTCAAAACCACCTGAGGACTTATCGTATGCTCAGCAATCAGTCCTTGCATGCAGTGGACTTATATGGGCAAGATACAGCACATTAATTAAACCAAAGAACTGGAATCTTGTCAGTGTCAATCTTGGGATGTCTCTAACTGCCCTGTTTCAACTGTCACGTAAAATTCAGCATGACTCATCAGTCAAAAACCAGCAAGCTTCTGCAGAAGAAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MPC

Protein Analysis

110

Amino Acids

12.17

Weight (kDa)

9.21

Isoelectric Point (pI)

53.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 293
AcsI RAATTY 2 cut(s) 7, 276
AgsI TTSAA 1 cut(s) 263
AluBI AGCT 2 cut(s) 16, 311
AluI AGCT 2 cut(s) 16, 311
Alw26I GTCTC 1 cut(s) 249
AoxI GGCC 2 cut(s) 43, 66
ApaI GGGCCC 1 cut(s) 70
ApeKI GCWGC 1 cut(s) 16
ApoI RAATTY 2 cut(s) 7, 276
AseI ATTAAT 1 cut(s) 197
AspS9I GGNCC 3 cut(s) 44, 66, 67
AxyI CCTNAGG 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 70
BanII GRGCYC 1 cut(s) 70
BbvI GCAGC 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 249
BfmI CTRYAG 1 cut(s) 315
BisI GCNGC 1 cut(s) 17
BlpI GCTNAGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 18
BmgT120I GGNCC 3 cut(s) 44, 66, 67
BmiI GGNNCC 3 cut(s) 32, 68, 69
Bpu1102I GCTNAGC 1 cut(s) 144
BsaAI YACGTR 1 cut(s) 272
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 218
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 1 cut(s) 93
BseGI GGATG 1 cut(s) 246
BseMI GCAATG 1 cut(s) 93
BseMII CTCAG 2 cut(s) 117, 158
BseNI ACTGG 1 cut(s) 218
BseRI GAGGAG 1 cut(s) 103
BseSI GKGCMC 1 cut(s) 70
BseXI GCAGC 1 cut(s) 3
BseYI CCCAGC 1 cut(s) 37
BshFI GGCC 2 cut(s) 45, 68
BsiSI CCGG 1 cut(s) 42
BsmAI GTCTC 1 cut(s) 249
BsnI GGCC 2 cut(s) 45, 68
Bsp120I GGGCCC 1 cut(s) 66
Bsp1286I GDGCHC 1 cut(s) 70
Bsp1720I GCTNAGC 1 cut(s) 144
BspANI GGCC 2 cut(s) 45, 68
BspCNI CTCAG 2 cut(s) 118, 157
BspLI GGNNCC 3 cut(s) 32, 68, 69
BspMAI CTGCAG 1 cut(s) 319
BsrDI GCAATG 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 41
Bst4CI ACNGT 1 cut(s) 267
BstBAI YACGTR 1 cut(s) 272
BstC8I GCNNGC 4 cut(s) 21, 43, 163, 309
BstDEI CTNAG 3 cut(s) 12, 126, 144
BstF5I GGATG 1 cut(s) 246
BstMAI GTCTC 1 cut(s) 249
BstNSI RCATGY 1 cut(s) 165
BstSFI CTRYAG 1 cut(s) 315
BstSLI GKGCMC 1 cut(s) 70
BstV1I GCAGC 1 cut(s) 3
BstXI CCANNNNNNTGG 1 cut(s) 213
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 2 cut(s) 45, 68
BtsCI GGATG 1 cut(s) 246
BtsI GCAGTG 1 cut(s) 172
BtsIMutI CAGTG 2 cut(s) 172, 232
Cac8I GCNNGC 4 cut(s) 21, 43, 163, 309
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 3 cut(s) 44, 66, 67
CviAII CATG 2 cut(s) 162, 284
CviJI RGCY 5 cut(s) 16, 41, 45, 68, 311
CviKI_1 RGCY 5 cut(s) 16, 41, 45, 68, 311
DdeI CTNAG 3 cut(s) 12, 126, 144
DraI TTTAAA 1 cut(s) 79
DrdI GACNNNNNNGTC 1 cut(s) 293
DseDI GACNNNNNNGTC 1 cut(s) 293
Eco24I GRGCYC 1 cut(s) 70
Eco81I CCTNAGG 1 cut(s) 126
EcoO109I RGGNCCY 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 70
FaeI CATG 2 cut(s) 165, 287
FaiI YATR 5 cut(s) 141, 163, 176, 178, 285
FatI CATG 2 cut(s) 161, 283
Fnu4HI GCNGC 1 cut(s) 17
FokI GGATG 1 cut(s) 253
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 1 cut(s) 17
GluI GCNGC 1 cut(s) 17
GsaI CCCAGC 1 cut(s) 41
HaeIII GGCC 2 cut(s) 45, 68
HapII CCGG 1 cut(s) 42
Hin1II CATG 2 cut(s) 165, 287
HindIII AAGCTT 1 cut(s) 309
HinfI GANTC 3 cut(s) 110, 217, 287
HpaII CCGG 1 cut(s) 42
Hpy166II GTNNAC 1 cut(s) 170
Hpy188III TCNNGA 1 cut(s) 107
Hpy8I GTNNAC 1 cut(s) 170
HpyCH4III ACNGT 1 cut(s) 267
HpyCH4IV ACGT 1 cut(s) 271
HpyCH4V TGCA 5 cut(s) 19, 98, 161, 165, 317
HpyF3I CTNAG 3 cut(s) 12, 126, 144
HpySE526I ACGT 1 cut(s) 271
Hsp92II CATG 2 cut(s) 165, 287
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
LpnPI CCDG 6 cut(s) 51, 55, 138, 199, 269, 317
Lsp1109I GCAGC 1 cut(s) 3
MaeII ACGT 1 cut(s) 271
MaeIII GTNAC 1 cut(s) 267
MhlI GDGCHC 1 cut(s) 70
MluCI AATT 4 cut(s) 7, 24, 198, 276
MlyI GAGTC 2 cut(s) 104, 281
MnlI CCTC 2 cut(s) 121, 124
MroNI GCCGGC 1 cut(s) 41
MseI TTAA 3 cut(s) 78, 197, 201
MspI CCGG 1 cut(s) 42
NaeI GCCGGC 1 cut(s) 43
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 2 cut(s) 165, 287
NlaIV GGNNCC 3 cut(s) 32, 68, 69
NmuCI GTSAC 1 cut(s) 267
NspI RCATGY 1 cut(s) 165
PacI TTAATTAA 1 cut(s) 201
PaeI GCATGC 1 cut(s) 165
PdiI GCCGGC 1 cut(s) 43
PfeI GAWTC 1 cut(s) 217
PkrI GCNGC 1 cut(s) 18
PleI GAGTC 2 cut(s) 104, 281
PpsI GAGTC 2 cut(s) 104, 281
Ppu21I YACGTR 1 cut(s) 272
PshBI ATTAAT 1 cut(s) 197
PspFI CCCAGC 1 cut(s) 37
PspN4I GGNNCC 3 cut(s) 32, 68, 69
PspOMI GGGCCC 1 cut(s) 66
PspPI GGNCC 3 cut(s) 44, 66, 67
PstI CTGCAG 1 cut(s) 319
SaqAI TTAA 3 cut(s) 78, 197, 201
SatI GCNGC 1 cut(s) 17
Sau96I GGNCC 3 cut(s) 44, 66, 67
SchI GAGTC 2 cut(s) 104, 281
SduI GDGCHC 1 cut(s) 70
SetI ASST 4 cut(s) 18, 127, 274, 313
SfcI CTRYAG 1 cut(s) 315
SphI GCATGC 1 cut(s) 165
Sse9I AATT 4 cut(s) 7, 24, 198, 276
SspI AATATT 1 cut(s) 103
TaaI ACNGT 1 cut(s) 267
TaiI ACGT 1 cut(s) 274
TasI AATT 4 cut(s) 7, 24, 198, 276
TfiI GAWTC 1 cut(s) 217
Tru1I TTAA 3 cut(s) 78, 197, 201
Tru9I TTAA 3 cut(s) 78, 197, 201
TscAI CASTG 2 cut(s) 172, 232
TseFI GTSAC 1 cut(s) 267
TseI GCWGC 1 cut(s) 16
Tsp45I GTSAC 1 cut(s) 267
TspDTI ATGAA 1 cut(s) 47
TspRI CASTG 2 cut(s) 172, 232
VspI ATTAAT 1 cut(s) 197
XapI RAATTY 2 cut(s) 7, 276
XceI RCATGY 1 cut(s) 165
XcmI CCANNNNNNNNNTGG 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.