Prupe.3G207800_v2.0.a1

Mitochondrial pyruvate carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0005603
Physical Location & Seq
Reverse (-)
21416873 .. 21419023
2151 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G207800.1

Sequence Viewer

Length: 330 bp
ATGGCAAATTCTAAGCTGCAAGCATTTTGGAACCACCCAGCCGGCCCGAAAACTATCCATTTTTGGGCCCCAACTTTTAAATGGGGTTTAACCATTGCAAATATCCTTGACTCTTCAAAACCACCTGAGGAACTATCCTATCCTCAGCAATCAGTCCTTGCATGCAGTGGACTCATATGGGCCAGATACGGCACAGTAATTACACCAAAGAACTGGAATCTTGCCAGTGTCAATTTTGGGATGTCTCTAACTGCCCTGTTTCAACTGTCACGAAAAATTCAGCATGACTTATCTGCCAAAACCCAAGAAGCTGATGCAGAAGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MPC

Protein Analysis

110

Amino Acids

12.19

Weight (kDa)

6.83

Isoelectric Point (pI)

49.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 7, 276
AfiI CCNNNNNNNGG 1 cut(s) 64
AgsI TTSAA 2 cut(s) 117, 263
AluBI AGCT 2 cut(s) 16, 311
AluI AGCT 2 cut(s) 16, 311
Alw26I GTCTC 1 cut(s) 249
AoxI GGCC 3 cut(s) 43, 66, 180
ApaI GGGCCC 1 cut(s) 70
ApeKI GCWGC 1 cut(s) 16
ApoI RAATTY 2 cut(s) 7, 276
AspS9I GGNCC 4 cut(s) 44, 66, 67, 180
AxyI CCTNAGG 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 70
BanII GRGCYC 1 cut(s) 70
BbvCI CCTCAGC 1 cut(s) 144
BbvI GCAGC 1 cut(s) 3
BceAI ACGGC 1 cut(s) 205
BcoDI GTCTC 1 cut(s) 249
BisI GCNGC 1 cut(s) 17
BlsI GCNGC 1 cut(s) 18
BmgT120I GGNCC 4 cut(s) 44, 66, 67, 180
BmiI GGNNCC 3 cut(s) 32, 68, 69
BmsI GCATC 1 cut(s) 304
Bpu10I CCTNAGC 1 cut(s) 144
Bsc4I CCNNNNNNNGG 1 cut(s) 64
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 2 cut(s) 218, 225
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 1 cut(s) 93
BseGI GGATG 1 cut(s) 246
BseLI CCNNNNNNNGG 1 cut(s) 64
BseMI GCAATG 1 cut(s) 93
BseMII CTCAG 2 cut(s) 117, 158
BseNI ACTGG 2 cut(s) 218, 225
BseSI GKGCMC 1 cut(s) 70
BseXI GCAGC 1 cut(s) 3
BseYI CCCAGC 1 cut(s) 37
BshFI GGCC 3 cut(s) 45, 68, 182
BsiSI CCGG 1 cut(s) 42
BslI CCNNNNNNNGG 1 cut(s) 64
BsmAI GTCTC 1 cut(s) 249
BsnI GGCC 3 cut(s) 45, 68, 182
Bsp120I GGGCCC 1 cut(s) 66
Bsp1286I GDGCHC 1 cut(s) 70
BspANI GGCC 3 cut(s) 45, 68, 182
BspCNI CTCAG 2 cut(s) 118, 157
BspLI GGNNCC 3 cut(s) 32, 68, 69
BsrDI GCAATG 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 2 cut(s) 218, 225
BssAI RCCGGY 1 cut(s) 41
Bst4CI ACNGT 2 cut(s) 196, 267
Bst6I CTCTTC 1 cut(s) 118
BstC8I GCNNGC 3 cut(s) 21, 43, 163
BstDEI CTNAG 3 cut(s) 12, 126, 144
BstF5I GGATG 1 cut(s) 246
BstMAI GTCTC 1 cut(s) 249
BstNSI RCATGY 1 cut(s) 165
BstSLI GKGCMC 1 cut(s) 70
BstV1I GCAGC 1 cut(s) 3
BstXI CCANNNNNNTGG 1 cut(s) 213
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 3 cut(s) 45, 68, 182
BtsCI GGATG 1 cut(s) 246
BtsI GCAGTG 1 cut(s) 172
BtsIMutI CAGTG 2 cut(s) 172, 232
Cac8I GCNNGC 3 cut(s) 21, 43, 163
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 4 cut(s) 44, 66, 67, 180
CviAII CATG 2 cut(s) 162, 284
CviJI RGCY 6 cut(s) 16, 41, 45, 68, 182, 311
CviKI_1 RGCY 6 cut(s) 16, 41, 45, 68, 182, 311
DdeI CTNAG 3 cut(s) 12, 126, 144
DraI TTTAAA 1 cut(s) 79
Eam1104I CTCTTC 1 cut(s) 118
EarI CTCTTC 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 70
Eco81I CCTNAGG 1 cut(s) 126
EcoO109I RGGNCCY 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 70
FaeI CATG 2 cut(s) 165, 287
FaiI YATR 4 cut(s) 163, 176, 178, 285
FatI CATG 2 cut(s) 161, 283
FauNDI CATATG 1 cut(s) 176
Fnu4HI GCNGC 1 cut(s) 17
FokI GGATG 1 cut(s) 253
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 1 cut(s) 17
GluI GCNGC 1 cut(s) 17
GsaI CCCAGC 1 cut(s) 41
HaeIII GGCC 3 cut(s) 45, 68, 182
HapII CCGG 1 cut(s) 42
Hin1II CATG 2 cut(s) 165, 287
HinfI GANTC 3 cut(s) 110, 171, 217
HpaII CCGG 1 cut(s) 42
Hpy166II GTNNAC 1 cut(s) 170
Hpy188III TCNNGA 1 cut(s) 270
Hpy8I GTNNAC 1 cut(s) 170
HpyCH4III ACNGT 2 cut(s) 196, 267
HpyCH4V TGCA 5 cut(s) 19, 98, 161, 165, 317
HpyF3I CTNAG 3 cut(s) 12, 126, 144
Hsp92II CATG 2 cut(s) 165, 287
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
LpnPI CCDG 7 cut(s) 51, 55, 138, 196, 199, 238, 269
Lsp1109I GCAGC 1 cut(s) 3
LweI GCATC 1 cut(s) 304
MaeIII GTNAC 1 cut(s) 267
MboII GAAGA 1 cut(s) 105
MhlI GDGCHC 1 cut(s) 70
MluCI AATT 4 cut(s) 7, 198, 232, 276
MlyI GAGTC 2 cut(s) 104, 165
MnlI CCTC 2 cut(s) 121, 153
MroNI GCCGGC 1 cut(s) 41
MseI TTAA 2 cut(s) 78, 89
MspI CCGG 1 cut(s) 42
NaeI GCCGGC 1 cut(s) 43
NdeI CATATG 1 cut(s) 176
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 2 cut(s) 165, 287
NlaIV GGNNCC 3 cut(s) 32, 68, 69
NmuCI GTSAC 1 cut(s) 267
NspI RCATGY 1 cut(s) 165
PaeI GCATGC 1 cut(s) 165
PdiI GCCGGC 1 cut(s) 43
PfeI GAWTC 1 cut(s) 217
PkrI GCNGC 1 cut(s) 18
PleI GAGTC 2 cut(s) 104, 165
PpsI GAGTC 2 cut(s) 104, 165
PspFI CCCAGC 1 cut(s) 37
PspN4I GGNNCC 3 cut(s) 32, 68, 69
PspOMI GGGCCC 1 cut(s) 66
PspPI GGNCC 4 cut(s) 44, 66, 67, 180
SaqAI TTAA 2 cut(s) 78, 89
SatI GCNGC 1 cut(s) 17
Sau96I GGNCC 4 cut(s) 44, 66, 67, 180
SchI GAGTC 2 cut(s) 104, 165
SduI GDGCHC 1 cut(s) 70
SetI ASST 3 cut(s) 18, 127, 313
SfaNI GCATC 1 cut(s) 304
SphI GCATGC 1 cut(s) 165
Sse9I AATT 4 cut(s) 7, 198, 232, 276
TaaI ACNGT 2 cut(s) 196, 267
TasI AATT 4 cut(s) 7, 198, 232, 276
TfiI GAWTC 1 cut(s) 217
Tru1I TTAA 2 cut(s) 78, 89
Tru9I TTAA 2 cut(s) 78, 89
TscAI CASTG 2 cut(s) 172, 232
TseFI GTSAC 1 cut(s) 267
TseI GCWGC 1 cut(s) 16
Tsp45I GTSAC 1 cut(s) 267
TspRI CASTG 2 cut(s) 172, 232
XapI RAATTY 2 cut(s) 7, 276
XceI RCATGY 1 cut(s) 165
XcmI CCANNNNNNNNNTGG 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.