Prupe.3G232100_v2.0.a1

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
22889710 .. 22893213
3504 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G232100.1

Sequence Viewer

Length: 1599 bp
ATGAGGCGGAGAGCCGCGGACTTTCGGAGGCCCCTGAGGAGGCGGTTTCCCAATGCCTTGTGGTGGGTACTGTGTGGGGTTGCAGTTTTGCTCTTCATTTTCACTTTGAGCAGAGGAAATCAGATGGAGTCCAGGCCTGTCATTCCCACGAGATACAGGAATGATAGACTTATGGAAGGCCTTAACATTACCGAAGAAATGTTGAATCCCAACTCAGTTTCCAGGCAGCTCAATGACCAAATTGCTCTGGCAAAAGCTTTCGTTGTGATTGCCAAAGAAAGCAACAACCTTCAATTTGCTTGGGAATTAAGTGCTCAGATTCGAAGTTCACAGATCCTGCTGTCAAATGCTGCAACCAGGCGAATTCCTCTGACAATTAGAGAATCGGAAACTGCAATTCGCGATATGGCACTAATACTGTACCAAGCACAGCAGCTCCATTATGATAGTGCAACCATGATCATGAGACTGAAAGCCAAAATCCAAGCTCTGGAAGAACAAATGAGTTCTGTGAGTGAGAAAAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAAAGTCTCTACTGTCTTGGTATTCAGTTGACTGGTGAATGGTTCAGAAACTCAAATCTACAGAGGAAAACCAAGGACAGAAAGCAAATAGACATGAAACTGAAGGATAACAATCTCTATCATTTCTGTGTCTTCTCTGACAACATCCTAGCAACTTCAGTTGTGGTCAATTCAACTTCTATAAATTCCAAAAGTCCAGATAAGATTGTCTTCCATCTCGTAACTGATGAAATCAACTATGCTGCAATGAAGGCCTGGTTTTCTATAAACAGCTTCAGAGGAGTGGTCATTGAGGTTCAAAAATTTGCGGATTTTACATGGTTAAATGCTTCTTATGTTCCCGTACTTAAGCAGCTCCAAGACTCTGAAACTCAAAGTTATTATTTTTCTGGAAATAATGATGATGGCCGGACACCAATCAAGTTTCGGAACCCAAAGTATCTTTCTATGCTTAATCATCTGAGGTTTTATATTCCAGAAGTTTTTCCTGCCCTGAAGAAGGTGGTGTTTTTGGATGATGATGTTGTGGTTCAGAAGGATGTGTCTGATCTGTTCTCTATTGATTTGAATGGTAATGTTAATGGAGCGGTGGAGACATGCATGGAGACATTTCACAGATACCATAAATATCTGAATTACTCTCACCCTCTCATAAGAGCACATTTTGACCCTGATGCATGTGGATGGGCGTTTGGGATGAATGTTTTTGATTTGGTTCAGTGGAGGAAGAGGAATGTCACCGGTATCTACCACTACTGGCAGGAAAGAAATGTAGATCGAACATTGTGGAAACTTGGCACATTGCCACCTGGATTGTTGACATTCTACGGATTGACAGAGCCTTTGGATCCCTCGTGGCATATTCTGGGTTTAGGCTACACAAATGTTGATCCTCATTTGATAGAGAAAGGAGCTGTGCTGCACTACAATGGAAACTCGAAACCATGGTTGAAGATTGGGATGGAAAAGTACAAGCCCCTTTGGGAGAAATATGTTGATTATAGCCATCCCTTATTACAAAGATGCAATTTCCATTGA

Protein Analysis

533

Amino Acids

61.79

Weight (kDa)

9.19

Isoelectric Point (pI)

44.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 490
AccBSI CCGCTC 1 cut(s) 1148
AccII CGCG 2 cut(s) 17, 402
AciI CCGC 6 cut(s) 7, 15, 17, 43, 869, 1148
AclWI GGATC 4 cut(s) 328, 1403, 1416, 1445
AcoI YGGCCR 1 cut(s) 967
AcsI RAATTY 3 cut(s) 363, 745, 863
AcuI CTGAAG 5 cut(s) 570, 683, 702, 820, 1076
AfaI GTAC 4 cut(s) 69, 422, 906, 1532
AfiI CCNNNNNNNGG 4 cut(s) 39, 63, 490, 1060
AflII CTTAAG 1 cut(s) 908
AgeI ACCGGT 1 cut(s) 1301
AgsI TTSAA 7 cut(s) 205, 293, 528, 735, 860, 1129, 1513
AjnI CCWGG 5 cut(s) 131, 221, 356, 815, 1369
AjuI GAANNNNNNNTTGG 2 cut(s) 988, 1020
AluBI AGCT 8 cut(s) 229, 257, 436, 488, 545, 834, 916, 1475
AluI AGCT 8 cut(s) 229, 257, 436, 488, 545, 834, 916, 1475
Alw21I GWGCWC 2 cut(s) 316, 1222
Alw26I GTCTC 4 cut(s) 460, 572, 1148, 1160
AlwI GGATC 4 cut(s) 328, 1403, 1416, 1445
AlwNI CAGNNNCTG 1 cut(s) 337
AoxI GGCC 5 cut(s) 29, 134, 178, 813, 967
ApeKI GCWGC 7 cut(s) 226, 350, 433, 545, 803, 913, 1480
ApoI RAATTY 3 cut(s) 363, 745, 863
ArsI GACNNNNNNTTYG 2 cut(s) 1387, 1419
AsiGI ACCGGT 1 cut(s) 1301
Asp700I GAANNNNTTC 1 cut(s) 1044
AspS9I GGNCC 1 cut(s) 30
AsuHPI GGTGA 3 cut(s) 608, 1196, 1291
AsuII TTCGAA 1 cut(s) 322
AxyI CCTNAGG 1 cut(s) 35
BamHI GGATCC 1 cut(s) 1408
BauI CACGAG 2 cut(s) 148, 1414
BbsI GAAGAC 2 cut(s) 685, 763
Bbv12I GWGCWC 2 cut(s) 316, 1222
BbvI GCAGC 7 cut(s) 238, 337, 445, 532, 790, 925, 1467
BccI CCATC 6 cut(s) 118, 783, 959, 1239, 1516, 1575
BciT130I CCWGG 5 cut(s) 133, 223, 358, 817, 1371
BclI TGATCA 1 cut(s) 459
BcoDI GTCTC 4 cut(s) 460, 572, 1148, 1160
BfaI CTAG 1 cut(s) 710
BfmI CTRYAG 1 cut(s) 620
BfrI CTTAAG 1 cut(s) 908
BisI GCNGC 8 cut(s) 15, 227, 351, 434, 546, 804, 914, 1481
BlsI GCNGC 8 cut(s) 16, 228, 352, 435, 547, 805, 915, 1482
Bme1390I CCNGG 5 cut(s) 133, 223, 358, 817, 1371
BmgT120I GGNCC 1 cut(s) 30
BmiI GGNNCC 3 cut(s) 32, 992, 1410
BmrFI CCNGG 5 cut(s) 133, 223, 358, 817, 1371
BmsI GCATC 2 cut(s) 1225, 1574
BpiI GAAGAC 2 cut(s) 685, 763
Bpu14I TTCGAA 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 672
BsaJI CCNNGG 3 cut(s) 15, 633, 1505
BsaWI WCCGGW 1 cut(s) 1301
BsaXI ACNNNNNCTCC 2 cut(s) 420, 450
Bsc4I CCNNNNNNNGG 4 cut(s) 39, 63, 490, 1060
Bse118I RCCGGY 1 cut(s) 1301
Bse1I ACTGG 2 cut(s) 598, 1322
Bse21I CCTNAGG 1 cut(s) 35
Bse3DI GCAATG 2 cut(s) 813, 1361
Bse8I GATNNNNATC 1 cut(s) 672
BseBI CCWGG 5 cut(s) 133, 223, 358, 817, 1371
BseDI CCNNGG 3 cut(s) 15, 633, 1505
BseGI GGATG 7 cut(s) 705, 1081, 1105, 1250, 1263, 1527, 1567
BseJI GATNNNNATC 1 cut(s) 672
BseLI CCNNNNNNNGG 4 cut(s) 39, 63, 490, 1060
BseMI GCAATG 2 cut(s) 813, 1361
BseMII CTCAG 4 cut(s) 26, 228, 329, 1013
BseNI ACTGG 2 cut(s) 598, 1322
BseRI GAGGAG 2 cut(s) 52, 855
BseXI GCAGC 7 cut(s) 238, 337, 445, 532, 790, 925, 1467
BsgI GTGCAG 1 cut(s) 1466
Bsh1236I CGCG 2 cut(s) 17, 402
BshFI GGCC 5 cut(s) 31, 136, 180, 815, 969
BshTI ACCGGT 1 cut(s) 1301
BsiHKAI GWGCWC 2 cut(s) 316, 1222
BsiSI CCGG 2 cut(s) 970, 1302
BslFI GGGAC 1 cut(s) 542
BslI CCNNNNNNNGG 4 cut(s) 39, 63, 490, 1060
BsmAI GTCTC 4 cut(s) 460, 572, 1148, 1160
BsmFI GGGAC 1 cut(s) 542
BsnI GGCC 5 cut(s) 31, 136, 180, 815, 969
Bsp119I TTCGAA 1 cut(s) 322
Bsp1286I GDGCHC 2 cut(s) 316, 1222
Bsp143I GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
Bsp19I CCATGG 1 cut(s) 1505
Bsp68I TCGCGA 1 cut(s) 402
BspACI CCGC 6 cut(s) 7, 15, 17, 43, 869, 1148
BspANI GGCC 5 cut(s) 31, 136, 180, 815, 969
BspCNI CTCAG 4 cut(s) 27, 227, 328, 1014
BspFNI CGCG 2 cut(s) 17, 402
BspHI TCATGA 1 cut(s) 462
BspLI GGNNCC 3 cut(s) 32, 992, 1410
BspPI GGATC 4 cut(s) 328, 1403, 1416, 1445
BspQI GCTCTTC 1 cut(s) 98
BspT104I TTCGAA 1 cut(s) 322
BspTI CTTAAG 1 cut(s) 908
BsrBI CCGCTC 1 cut(s) 1148
BsrDI GCAATG 2 cut(s) 813, 1361
BsrFI RCCGGY 1 cut(s) 1301
BsrI ACTGG 2 cut(s) 598, 1322
BssAI RCCGGY 1 cut(s) 1301
BssECI CCNNGG 3 cut(s) 15, 633, 1505
BssMI GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
BssSI CACGAG 2 cut(s) 148, 1414
BssT1I CCWWGG 2 cut(s) 633, 1505
Bst2BI CACGAG 2 cut(s) 148, 1414
Bst2UI CCWGG 5 cut(s) 133, 223, 358, 817, 1371
Bst4CI ACNGT 3 cut(s) 72, 420, 575
Bst6I CTCTTC 2 cut(s) 98, 1283
BstAFI CTTAAG 1 cut(s) 908
BstBI TTCGAA 1 cut(s) 322
BstDEI CTNAG 4 cut(s) 35, 214, 315, 1022
BstDSI CCRYGG 2 cut(s) 15, 1505
BstENI CCTNNNNNAGG 1 cut(s) 1058
BstF5I GGATG 7 cut(s) 705, 1081, 1105, 1250, 1263, 1527, 1567
BstFNI CGCG 2 cut(s) 17, 402
BstKTI GATC 6 cut(s) 336, 462, 1111, 1339, 1411, 1453
BstMAI GTCTC 4 cut(s) 460, 572, 1148, 1160
BstMBI GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
BstMWI GCNNNNNNNGC 1 cut(s) 812
BstNI CCWGG 5 cut(s) 133, 223, 358, 817, 1371
BstNSI RCATGY 2 cut(s) 1161, 1242
BstSCI CCNGG 5 cut(s) 131, 221, 356, 815, 1369
BstSFI CTRYAG 1 cut(s) 620
BstUI CGCG 2 cut(s) 17, 402
BstV1I GCAGC 7 cut(s) 238, 337, 445, 532, 790, 925, 1467
BstV2I GAAGAC 2 cut(s) 685, 763
BstX2I RGATCY 2 cut(s) 333, 1408
BstYI RGATCY 2 cut(s) 333, 1408
Bsu36I CCTNAGG 1 cut(s) 35
BsuRI GGCC 5 cut(s) 31, 136, 180, 815, 969
BtgI CCRYGG 2 cut(s) 15, 1505
BtsCI GGATG 7 cut(s) 705, 1081, 1105, 1250, 1263, 1527, 1567
BtsIMutI CAGTG 1 cut(s) 1286
BtuMI TCGCGA 1 cut(s) 402
CaiI CAGNNNCTG 1 cut(s) 337
CciI TCATGA 1 cut(s) 462
Cfr10I RCCGGY 1 cut(s) 1301
Cfr13I GGNCC 1 cut(s) 30
Cfr42I CCGCGG 1 cut(s) 18
Csp6I GTAC 4 cut(s) 68, 421, 905, 1531
CspAI ACCGGT 1 cut(s) 1301
CspCI CAANNNNNGTGG 2 cut(s) 1356, 1391
CviAII CATG 8 cut(s) 457, 463, 655, 879, 1158, 1162, 1239, 1506
CviQI GTAC 4 cut(s) 68, 421, 905, 1531
DdeI CTNAG 4 cut(s) 35, 214, 315, 1022
DpnI GATC 6 cut(s) 335, 461, 1110, 1338, 1410, 1452
DpnII GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
EaeI YGGCCR 1 cut(s) 967
Eam1104I CTCTTC 2 cut(s) 98, 1283
EarI CTCTTC 2 cut(s) 98, 1283
EciI GGCGGA 1 cut(s) 22
Eco130I CCWWGG 2 cut(s) 633, 1505
Eco147I AGGCCT 3 cut(s) 136, 180, 815
Eco57I CTGAAG 5 cut(s) 570, 683, 702, 820, 1076
Eco81I CCTNAGG 1 cut(s) 35
EcoNI CCTNNNNNAGG 1 cut(s) 1058
EcoO109I RGGNCCY 1 cut(s) 30
EcoRI GAATTC 1 cut(s) 363
EcoRII CCWGG 5 cut(s) 131, 221, 356, 815, 1369
EcoT14I CCWWGG 2 cut(s) 633, 1505
EcoT22I ATGCAT 2 cut(s) 1163, 1240
ErhI CCWWGG 2 cut(s) 633, 1505
FaeI CATG 8 cut(s) 460, 466, 658, 882, 1161, 1165, 1242, 1509
FalI AAGNNNNNCTT 2 cut(s) 755, 787
FaqI GGGAC 1 cut(s) 542
FatI CATG 8 cut(s) 456, 462, 654, 878, 1157, 1161, 1238, 1505
FbaI TGATCA 1 cut(s) 459
Fnu4HI GCNGC 8 cut(s) 15, 227, 351, 434, 546, 804, 914, 1481
FokI GGATG 7 cut(s) 692, 1088, 1112, 1257, 1270, 1534, 1554
Fsp4HI GCNGC 8 cut(s) 15, 227, 351, 434, 546, 804, 914, 1481
FspBI CTAG 1 cut(s) 710
GluI GCNGC 8 cut(s) 15, 227, 351, 434, 546, 804, 914, 1481
HaeIII GGCC 5 cut(s) 31, 136, 180, 815, 969
HapII CCGG 2 cut(s) 970, 1302
Hin1II CATG 8 cut(s) 460, 466, 658, 882, 1161, 1165, 1242, 1509
HincII GTYRAC 2 cut(s) 591, 1380
HindII GTYRAC 2 cut(s) 591, 1380
HindIII AAGCTT 1 cut(s) 255
HinfI GANTC 5 cut(s) 128, 205, 319, 383, 923
HpaII CCGG 2 cut(s) 970, 1302
HphI GGTGA 3 cut(s) 608, 1196, 1291
Hpy166II GTNNAC 3 cut(s) 329, 591, 1380
Hpy188III TCNNGA 6 cut(s) 401, 463, 491, 758, 951, 1037
Hpy8I GTNNAC 3 cut(s) 329, 591, 1380
HpyAV CCTTC 6 cut(s) 170, 299, 658, 805, 1054, 1090
HpyCH4III ACNGT 3 cut(s) 72, 420, 575
HpyCH4V TGCA 9 cut(s) 83, 353, 395, 452, 806, 1161, 1238, 1483, 1587
HpyF10VI GCNNNNNNNGC 1 cut(s) 812
HpyF3I CTNAG 4 cut(s) 35, 214, 315, 1022
Hsp92II CATG 8 cut(s) 460, 466, 658, 882, 1161, 1165, 1242, 1509
Ksp22I TGATCA 1 cut(s) 459
KspI CCGCGG 1 cut(s) 18
Kzo9I GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
LguI GCTCTTC 1 cut(s) 98
LmnI GCTCC 4 cut(s) 441, 921, 1145, 1472
Lsp1109I GCAGC 7 cut(s) 238, 337, 445, 532, 790, 925, 1467
LweI GCATC 2 cut(s) 1225, 1574
MaeI CTAG 1 cut(s) 710
MaeIII GTNAC 2 cut(s) 781, 1297
MalI GATC 6 cut(s) 335, 461, 1110, 1338, 1410, 1452
MbiI CCGCTC 1 cut(s) 1148
MboI GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
MboII GAAGA 9 cut(s) 85, 206, 506, 563, 685, 763, 1069, 1300, 1525
MflI RGATCY 2 cut(s) 333, 1408
MhlI GDGCHC 2 cut(s) 316, 1222
MlyI GAGTC 2 cut(s) 137, 917
Mph1103I ATGCAT 2 cut(s) 1163, 1240
MroXI GAANNNNTTC 1 cut(s) 1044
MseI TTAA 6 cut(s) 183, 308, 884, 909, 1014, 1140
MslI CAYNNNNRTG 4 cut(s) 461, 687, 1243, 1488
MspA1I CMGCKG 1 cut(s) 17
MspCI CTTAAG 1 cut(s) 908
MspI CCGG 2 cut(s) 970, 1302
MspR9I CCNGG 5 cut(s) 133, 223, 358, 817, 1371
MvaI CCWGG 5 cut(s) 133, 223, 358, 817, 1371
MvnI CGCG 2 cut(s) 17, 402
MwoI GCNNNNNNNGC 1 cut(s) 812
NcoI CCATGG 1 cut(s) 1505
NdeII GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
NlaIII CATG 8 cut(s) 460, 466, 658, 882, 1161, 1165, 1242, 1509
NlaIV GGNNCC 3 cut(s) 32, 992, 1410
NmuCI GTSAC 1 cut(s) 1297
NruI TCGCGA 1 cut(s) 402
NsiI ATGCAT 2 cut(s) 1163, 1240
NspI RCATGY 2 cut(s) 1161, 1242
NspV TTCGAA 1 cut(s) 322
PagI TCATGA 1 cut(s) 462
PceI AGGCCT 3 cut(s) 136, 180, 815
PciSI GCTCTTC 1 cut(s) 98
PdmI GAANNNNTTC 1 cut(s) 1044
PfeI GAWTC 3 cut(s) 205, 319, 383
PflMI CCANNNNNTGG 1 cut(s) 490
PinAI ACCGGT 1 cut(s) 1301
PkrI GCNGC 8 cut(s) 16, 228, 352, 435, 547, 805, 915, 1482
PleI GAGTC 2 cut(s) 136, 917
PpsI GAGTC 2 cut(s) 136, 917
Psp6I CCWGG 5 cut(s) 131, 221, 356, 815, 1369
PspGI CCWGG 5 cut(s) 131, 221, 356, 815, 1369
PspN4I GGNNCC 3 cut(s) 32, 992, 1410
PspPI GGNCC 1 cut(s) 30
PstNI CAGNNNCTG 1 cut(s) 337
PsuI RGATCY 2 cut(s) 333, 1408
RruI TCGCGA 1 cut(s) 402
RsaI GTAC 4 cut(s) 69, 422, 906, 1532
RsaNI GTAC 4 cut(s) 68, 421, 905, 1531
RseI CAYNNNNRTG 4 cut(s) 461, 687, 1243, 1488
SacII CCGCGG 1 cut(s) 18
SapI GCTCTTC 1 cut(s) 98
SaqAI TTAA 6 cut(s) 183, 308, 884, 909, 1014, 1140
SatI GCNGC 8 cut(s) 15, 227, 351, 434, 546, 804, 914, 1481
Sau3AI GATC 6 cut(s) 333, 459, 1108, 1336, 1408, 1450
Sau96I GGNCC 1 cut(s) 30
SchI GAGTC 2 cut(s) 137, 917
ScrFI CCNGG 5 cut(s) 133, 223, 358, 817, 1371
SduI GDGCHC 2 cut(s) 316, 1222
SfaNI GCATC 2 cut(s) 1225, 1574
SfcI CTRYAG 1 cut(s) 620
Sfr303I CCGCGG 1 cut(s) 18
SfuI TTCGAA 1 cut(s) 322
SgrBI CCGCGG 1 cut(s) 18
SmiMI CAYNNNNRTG 4 cut(s) 461, 687, 1243, 1488
SmlI CTYRAG 1 cut(s) 908
SmoI CTYRAG 1 cut(s) 908
SseBI AGGCCT 3 cut(s) 136, 180, 815
SsiI CCGC 6 cut(s) 7, 15, 17, 43, 869, 1148
SspMI CTAG 1 cut(s) 710
StuI AGGCCT 3 cut(s) 136, 180, 815
StyD4I CCNGG 5 cut(s) 131, 221, 356, 815, 1369
StyI CCWWGG 2 cut(s) 633, 1505
TaaI ACNGT 3 cut(s) 72, 420, 575
TaqI TCGA 3 cut(s) 322, 1339, 1499
TatI WGTACW 1 cut(s) 1530
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 3 cut(s) 205, 319, 383
Tru1I TTAA 6 cut(s) 183, 308, 884, 909, 1014, 1140
Tru9I TTAA 6 cut(s) 183, 308, 884, 909, 1014, 1140
TscAI CASTG 1 cut(s) 1286
TseFI GTSAC 1 cut(s) 1297
TseI GCWGC 7 cut(s) 226, 350, 433, 545, 803, 913, 1480
Tsp45I GTSAC 1 cut(s) 1297
TspDTI ATGAA 5 cut(s) 85, 671, 804, 824, 1274
TspGWI ACGGA 1 cut(s) 1404
TspRI CASTG 1 cut(s) 1286
Van91I CCANNNNNTGG 1 cut(s) 490
Vha464I CTTAAG 1 cut(s) 908
XagI CCTNNNNNAGG 1 cut(s) 1058
XapI RAATTY 3 cut(s) 363, 745, 863
XceI RCATGY 2 cut(s) 1161, 1242
XmnI GAANNNNTTC 1 cut(s) 1044
XspI CTAG 1 cut(s) 710
Zsp2I ATGCAT 2 cut(s) 1163, 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.