H ACA ribonucleoprotein complex non-core subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03530 |
| fragaria_vesca | FvH4_6g44910 |
| malus_domestica | MD09G1092000.v1.1 MD17G1081900.v1.1 |
| prunus_persica | Prupe.3G233000_v2.0.a1 |
| pyrus_communis | pycom09g01750 pycom17g08010 |
| rosa_chinensis | RchiOBHm_Chr2g0162091 |
| rosa_laevigata | RLG00000021322 |
| rosa_multiflora | Rmu_co8199028.1_g000001 Rmu_co8200688.1_g000001 Rmu_sc0004020.1_g000037 |
| rosa_roxburghii | Rroxscaffold_2G00088310 |
| rosa_rugosa | Rorug02G0494600 |
| rosa_samantha | Rh2AG560800 Rh2BG574100 Rh2CG544400 Rh2DG584100 |
| rosa_wichuraiana | Rw2G046450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1514 |
| Acc65I | GGTACC | 1 cut(s) | 1052 |
| AccB1I | GGYRCC | 1 cut(s) | 1052 |
| AccII | CGCG | 1 cut(s) | 1587 |
| AccIII | TCCGGA | 2 cut(s) | 1255, 1822 |
| AciI | CCGC | 3 cut(s) | 884, 1587, 1844 |
| AclWI | GGATC | 2 cut(s) | 83, 1039 |
| AcsI | RAATTY | 6 cut(s) | 61, 249, 421, 888, 1352, 1885 |
| AcuI | CTGAAG | 1 cut(s) | 1872 |
| AfaI | GTAC | 2 cut(s) | 969, 1054 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 172, 1982 |
| AjnI | CCWGG | 3 cut(s) | 1471, 1478, 1981 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 983, 1015 |
| AluBI | AGCT | 8 cut(s) | 47, 385, 660, 929, 961, 1531, 1568, 1661 |
| AluI | AGCT | 8 cut(s) | 47, 385, 660, 929, 961, 1531, 1568, 1661 |
| Alw21I | GWGCWC | 2 cut(s) | 931, 1278 |
| Alw26I | GTCTC | 5 cut(s) | 90, 897, 1249, 2230, 2247 |
| AlwI | GGATC | 2 cut(s) | 83, 1039 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1918 |
| Ama87I | CYCGRG | 1 cut(s) | 661 |
| Aor13HI | TCCGGA | 2 cut(s) | 1255, 1822 |
| AoxI | GGCC | 5 cut(s) | 244, 1671, 1778, 1969, 2080 |
| ApeKI | GCWGC | 7 cut(s) | 657, 1531, 1568, 1610, 1661, 2197, 2284 |
| ApoI | RAATTY | 6 cut(s) | 61, 249, 421, 888, 1352, 1885 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 46, 78, 89, 121 |
| Asp718I | GGTACC | 1 cut(s) | 1052 |
| AspLEI | GCGC | 1 cut(s) | 2216 |
| AspS9I | GGNCC | 8 cut(s) | 70, 938, 948, 1163, 1475, 1898, 1969, 2009 |
| AsuC2I | CCSGG | 1 cut(s) | 2211 |
| AsuHPI | GGTGA | 9 cut(s) | 500, 602, 773, 788, 1201, 1491, 1764, 1776, 2084 |
| AsuII | TTCGAA | 1 cut(s) | 65 |
| AvaI | CYCGRG | 1 cut(s) | 661 |
| AvaII | GGWCC | 7 cut(s) | 70, 938, 948, 1163, 1475, 1898, 2009 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2000, 2033 |
| BanI | GGYRCC | 1 cut(s) | 1052 |
| BanII | GRGCYC | 2 cut(s) | 12, 931 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 765, 797 |
| BbsI | GAAGAC | 2 cut(s) | 39, 639 |
| Bbv12I | GWGCWC | 2 cut(s) | 931, 1278 |
| BbvI | GCAGC | 6 cut(s) | 669, 1518, 1555, 1622, 1648, 2209 |
| BceAI | ACGGC | 1 cut(s) | 1705 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2116, 2150 |
| BciT130I | CCWGG | 3 cut(s) | 1473, 1480, 1983 |
| BciVI | GTATCC | 1 cut(s) | 2028 |
| BclI | TGATCA | 2 cut(s) | 415, 1489 |
| BcnI | CCSGG | 1 cut(s) | 2211 |
| BcoDI | GTCTC | 5 cut(s) | 90, 897, 1249, 2230, 2247 |
| BfaI | CTAG | 2 cut(s) | 44, 603 |
| BfmI | CTRYAG | 1 cut(s) | 1608 |
| BfuAI | ACCTGC | 1 cut(s) | 1514 |
| BfuI | GTATCC | 1 cut(s) | 2028 |
| BglII | AGATCT | 1 cut(s) | 1130 |
| BisI | GCNGC | 7 cut(s) | 658, 1532, 1569, 1611, 1662, 2198, 2285 |
| BlsI | GCNGC | 7 cut(s) | 659, 1533, 1570, 1612, 1663, 2199, 2286 |
| Bme1390I | CCNGG | 4 cut(s) | 1473, 1480, 1983, 2211 |
| Bme18I | GGWCC | 7 cut(s) | 70, 938, 948, 1163, 1475, 1898, 2009 |
| BmeT110I | CYCGRG | 1 cut(s) | 661 |
| BmgT120I | GGNCC | 8 cut(s) | 70, 938, 948, 1163, 1475, 1898, 1969, 2009 |
| BmiI | GGNNCC | 6 cut(s) | 72, 940, 1005, 1054, 1477, 2011 |
| BmrFI | CCNGG | 4 cut(s) | 1473, 1480, 1983, 2211 |
| BmsI | GCATC | 8 cut(s) | 778, 871, 1011, 1300, 1322, 1510, 1707, 2225 |
| BpiI | GAAGAC | 2 cut(s) | 39, 639 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2227, 2259 |
| BpmI | CTGGAG | 2 cut(s) | 549, 1548 |
| Bpu14I | TTCGAA | 1 cut(s) | 65 |
| BpuEI | CTTGAG | 1 cut(s) | 983 |
| BpuMI | CCSGG | 1 cut(s) | 2211 |
| Bsa29I | ATCGAT | 1 cut(s) | 1043 |
| BsaI | GGTCTC | 2 cut(s) | 1249, 2230 |
| BsaJI | CCNNGG | 5 cut(s) | 999, 1048, 1478, 1775, 2113 |
| BsaWI | WCCGGW | 2 cut(s) | 1255, 1822 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 172, 1982 |
| Bse1I | ACTGG | 2 cut(s) | 1642, 1681 |
| BseAI | TCCGGA | 2 cut(s) | 1255, 1822 |
| BseBI | CCWGG | 3 cut(s) | 1473, 1480, 1983 |
| BseCI | ATCGAT | 1 cut(s) | 1043 |
| BseDI | CCNNGG | 5 cut(s) | 999, 1048, 1478, 1775, 2113 |
| BseGI | GGATG | 8 cut(s) | 12, 706, 793, 922, 1294, 1525, 1722, 2034 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 172, 1982 |
| BseNI | ACTGG | 2 cut(s) | 1642, 1681 |
| BseRI | GAGGAG | 2 cut(s) | 466, 719 |
| BseXI | GCAGC | 6 cut(s) | 669, 1518, 1555, 1622, 1648, 2209 |
| BseYI | CCCAGC | 1 cut(s) | 385 |
| BsgI | GTGCAG | 1 cut(s) | 1554 |
| Bsh1236I | CGCG | 1 cut(s) | 1587 |
| BshFI | GGCC | 5 cut(s) | 246, 1673, 1780, 1971, 2082 |
| BshNI | GGYRCC | 1 cut(s) | 1052 |
| BshVI | ATCGAT | 1 cut(s) | 1043 |
| BsiHKAI | GWGCWC | 2 cut(s) | 931, 1278 |
| BsiHKCI | CYCGRG | 1 cut(s) | 661 |
| BsiSI | CCGG | 3 cut(s) | 1256, 1823, 2210 |
| BslFI | GGGAC | 2 cut(s) | 316, 1648 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 172, 1982 |
| BsmAI | GTCTC | 5 cut(s) | 90, 897, 1249, 2230, 2247 |
| BsmBI | CGTCTC | 2 cut(s) | 897, 2247 |
| BsmFI | GGGAC | 2 cut(s) | 316, 1648 |
| BsmI | GAATGC | 4 cut(s) | 752, 1395, 2060, 2124 |
| BsnI | GGCC | 5 cut(s) | 246, 1673, 1780, 1971, 2082 |
| Bso31I | GGTCTC | 2 cut(s) | 1249, 2230 |
| BsoBI | CYCGRG | 1 cut(s) | 661 |
| Bsp119I | TTCGAA | 1 cut(s) | 65 |
| Bsp1286I | GDGCHC | 3 cut(s) | 12, 931, 1278 |
| Bsp13I | TCCGGA | 2 cut(s) | 1255, 1822 |
| Bsp143I | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| BspACI | CCGC | 3 cut(s) | 884, 1587, 1844 |
| BspANI | GGCC | 5 cut(s) | 246, 1673, 1780, 1971, 2082 |
| BspDI | ATCGAT | 1 cut(s) | 1043 |
| BspEI | TCCGGA | 2 cut(s) | 1255, 1822 |
| BspFNI | CGCG | 1 cut(s) | 1587 |
| BspLI | GGNNCC | 6 cut(s) | 72, 940, 1005, 1054, 1477, 2011 |
| BspMAI | CTGCAG | 1 cut(s) | 1612 |
| BspMI | ACCTGC | 1 cut(s) | 1514 |
| BspPI | GGATC | 2 cut(s) | 83, 1039 |
| BspQI | GCTCTTC | 1 cut(s) | 375 |
| BspT104I | TTCGAA | 1 cut(s) | 65 |
| BspT107I | GGYRCC | 1 cut(s) | 1052 |
| BspTNI | GGTCTC | 2 cut(s) | 1249, 2230 |
| BsrI | ACTGG | 2 cut(s) | 1642, 1681 |
| BssECI | CCNNGG | 5 cut(s) | 999, 1048, 1478, 1775, 2113 |
| BssMI | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| BssT1I | CCWWGG | 3 cut(s) | 999, 1048, 2113 |
| Bst2UI | CCWGG | 3 cut(s) | 1473, 1480, 1983 |
| Bst4CI | ACNGT | 6 cut(s) | 295, 307, 1776, 1881, 2153, 2241 |
| Bst6I | CTCTTC | 4 cut(s) | 375, 906, 1326, 2269 |
| BstBI | TTCGAA | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 2 cut(s) | 1234, 1848 |
| BstDSI | CCRYGG | 1 cut(s) | 1775 |
| BstF5I | GGATG | 8 cut(s) | 12, 706, 793, 922, 1294, 1525, 1722, 2034 |
| BstFNI | CGCG | 1 cut(s) | 1587 |
| BstHHI | GCGC | 1 cut(s) | 2216 |
| BstKTI | GATC | 8 cut(s) | 43, 91, 418, 1047, 1133, 1270, 1492, 1585 |
| BstMAI | GTCTC | 5 cut(s) | 90, 897, 1249, 2230, 2247 |
| BstMBI | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 243, 1670, 1726 |
| BstNI | CCWGG | 3 cut(s) | 1473, 1480, 1983 |
| BstNSI | RCATGY | 1 cut(s) | 2197 |
| BstSCI | CCNGG | 4 cut(s) | 1471, 1478, 1981, 2209 |
| BstSFI | CTRYAG | 1 cut(s) | 1608 |
| BstUI | CGCG | 1 cut(s) | 1587 |
| BstV1I | GCAGC | 6 cut(s) | 669, 1518, 1555, 1622, 1648, 2209 |
| BstV2I | GAAGAC | 2 cut(s) | 39, 639 |
| BstX2I | RGATCY | 1 cut(s) | 1130 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1430 |
| BstYI | RGATCY | 1 cut(s) | 1130 |
| Bsu15I | ATCGAT | 1 cut(s) | 1043 |
| BsuI | GTATCC | 1 cut(s) | 2028 |
| BsuRI | GGCC | 5 cut(s) | 246, 1673, 1780, 1971, 2082 |
| BsuTUI | ATCGAT | 1 cut(s) | 1043 |
| BtgI | CCRYGG | 1 cut(s) | 1775 |
| BtsCI | GGATG | 8 cut(s) | 12, 706, 793, 922, 1294, 1525, 1722, 2034 |
| BtsI | GCAGTG | 1 cut(s) | 685 |
| BtsIMutI | CAGTG | 2 cut(s) | 685, 1674 |
| BveI | ACCTGC | 1 cut(s) | 1514 |
| Cac8I | GCNNGC | 2 cut(s) | 1234, 1848 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1918 |
| CfoI | GCGC | 1 cut(s) | 2216 |
| Cfr13I | GGNCC | 8 cut(s) | 70, 938, 948, 1163, 1475, 1898, 1969, 2009 |
| ClaI | ATCGAT | 1 cut(s) | 1043 |
| CsiI | ACCWGGT | 1 cut(s) | 1981 |
| Csp6I | GTAC | 2 cut(s) | 968, 1053 |
| CviAII | CATG | 6 cut(s) | 464, 1271, 1931, 2014, 2042, 2194 |
| CviQI | GTAC | 2 cut(s) | 968, 1053 |
| DpnI | GATC | 8 cut(s) | 42, 90, 417, 1046, 1132, 1269, 1491, 1584 |
| DpnII | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| Eam1104I | CTCTTC | 4 cut(s) | 375, 906, 1326, 2269 |
| EarI | CTCTTC | 4 cut(s) | 375, 906, 1326, 2269 |
| Ecl136II | GAGCTC | 1 cut(s) | 929 |
| Eco130I | CCWWGG | 3 cut(s) | 999, 1048, 2113 |
| Eco24I | GRGCYC | 2 cut(s) | 12, 931 |
| Eco31I | GGTCTC | 2 cut(s) | 1249, 2230 |
| Eco47I | GGWCC | 7 cut(s) | 70, 938, 948, 1163, 1475, 1898, 2009 |
| Eco53kI | GAGCTC | 1 cut(s) | 929 |
| Eco57I | CTGAAG | 1 cut(s) | 1872 |
| Eco88I | CYCGRG | 1 cut(s) | 661 |
| EcoICRI | GAGCTC | 1 cut(s) | 929 |
| EcoO109I | RGGNCCY | 3 cut(s) | 70, 938, 2009 |
| EcoRI | GAATTC | 2 cut(s) | 61, 1885 |
| EcoRII | CCWGG | 3 cut(s) | 1471, 1478, 1981 |
| EcoT14I | CCWWGG | 3 cut(s) | 999, 1048, 2113 |
| EcoT22I | ATGCAT | 2 cut(s) | 1315, 2062 |
| EcoT38I | GRGCYC | 2 cut(s) | 12, 931 |
| ErhI | CCWWGG | 3 cut(s) | 999, 1048, 2113 |
| Esp3I | CGTCTC | 2 cut(s) | 897, 2247 |
| FaeI | CATG | 6 cut(s) | 467, 1274, 1934, 2017, 2045, 2197 |
| FaqI | GGGAC | 2 cut(s) | 316, 1648 |
| FatI | CATG | 6 cut(s) | 463, 1270, 1930, 2013, 2041, 2193 |
| FbaI | TGATCA | 2 cut(s) | 415, 1489 |
| Fnu4HI | GCNGC | 7 cut(s) | 658, 1532, 1569, 1611, 1662, 2198, 2285 |
| FokI | GGATG | 7 cut(s) | 713, 800, 929, 1301, 1532, 1729, 2041 |
| FriOI | GRGCYC | 2 cut(s) | 12, 931 |
| Fsp4HI | GCNGC | 7 cut(s) | 658, 1532, 1569, 1611, 1662, 2198, 2285 |
| FspBI | CTAG | 2 cut(s) | 44, 603 |
| GlaI | GCGC | 1 cut(s) | 2215 |
| GluI | GCNGC | 7 cut(s) | 658, 1532, 1569, 1611, 1662, 2198, 2285 |
| GsaI | CCCAGC | 1 cut(s) | 389 |
| GsuI | CTGGAG | 2 cut(s) | 549, 1548 |
| HaeIII | GGCC | 5 cut(s) | 246, 1673, 1780, 1971, 2082 |
| HapII | CCGG | 3 cut(s) | 1256, 1823, 2210 |
| HhaI | GCGC | 1 cut(s) | 2216 |
| Hin1II | CATG | 6 cut(s) | 467, 1274, 1934, 2017, 2045, 2197 |
| Hin6I | GCGC | 1 cut(s) | 2214 |
| HinP1I | GCGC | 1 cut(s) | 2214 |
| HincII | GTYRAC | 2 cut(s) | 1928, 1988 |
| HindII | GTYRAC | 2 cut(s) | 1928, 1988 |
| HinfI | GANTC | 5 cut(s) | 113, 131, 517, 632, 1426 |
| HpaII | CCGG | 3 cut(s) | 1256, 1823, 2210 |
| HphI | GGTGA | 9 cut(s) | 500, 602, 773, 788, 1201, 1491, 1764, 1776, 2084 |
| Hpy166II | GTNNAC | 8 cut(s) | 1294, 1772, 1877, 1928, 1964, 1988, 2075, 2191 |
| Hpy188III | TCNNGA | 4 cut(s) | 431, 1256, 1823, 2065 |
| Hpy8I | GTNNAC | 8 cut(s) | 1294, 1772, 1877, 1928, 1964, 1988, 2075, 2191 |
| Hpy99I | CGWCG | 2 cut(s) | 646, 755 |
| HpyCH4III | ACNGT | 6 cut(s) | 295, 307, 1776, 1881, 2153, 2241 |
| HpyCH4IV | ACGT | 3 cut(s) | 104, 1904, 2187 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 243, 1670, 1726 |
| HpySE526I | ACGT | 3 cut(s) | 104, 1904, 2187 |
| Hsp92II | CATG | 6 cut(s) | 467, 1274, 1934, 2017, 2045, 2197 |
| HspAI | GCGC | 1 cut(s) | 2214 |
| Kpn2I | TCCGGA | 2 cut(s) | 1255, 1822 |
| KpnI | GGTACC | 1 cut(s) | 1056 |
| Ksp22I | TGATCA | 2 cut(s) | 415, 1489 |
| Kzo9I | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| LguI | GCTCTTC | 1 cut(s) | 375 |
| LmnI | GCTCC | 1 cut(s) | 926 |
| Lsp1109I | GCAGC | 6 cut(s) | 669, 1518, 1555, 1622, 1648, 2209 |
| LweI | GCATC | 8 cut(s) | 778, 871, 1011, 1300, 1322, 1510, 1707, 2225 |
| MabI | ACCWGGT | 1 cut(s) | 1981 |
| MaeI | CTAG | 2 cut(s) | 44, 603 |
| MaeII | ACGT | 3 cut(s) | 104, 1904, 2187 |
| MaeIII | GTNAC | 1 cut(s) | 994 |
| MalI | GATC | 8 cut(s) | 42, 90, 417, 1046, 1132, 1269, 1491, 1584 |
| MboI | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| MfeI | CAATTG | 3 cut(s) | 270, 312, 1991 |
| MflI | RGATCY | 1 cut(s) | 1130 |
| MhlI | GDGCHC | 3 cut(s) | 12, 931, 1278 |
| MlyI | GAGTC | 3 cut(s) | 140, 526, 641 |
| Mph1103I | ATGCAT | 2 cut(s) | 1315, 2062 |
| MroI | TCCGGA | 2 cut(s) | 1255, 1822 |
| MseI | TTAA | 5 cut(s) | 150, 255, 483, 2102, 2205 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1679 |
| MspA1I | CMGCKG | 3 cut(s) | 1531, 1568, 1661 |
| MspI | CCGG | 3 cut(s) | 1256, 1823, 2210 |
| MspR9I | CCNGG | 4 cut(s) | 1473, 1480, 1983, 2211 |
| MunI | CAATTG | 3 cut(s) | 270, 312, 1991 |
| Mva1269I | GAATGC | 4 cut(s) | 752, 1395, 2060, 2124 |
| MvaI | CCWGG | 3 cut(s) | 1473, 1480, 1983 |
| MvnI | CGCG | 1 cut(s) | 1587 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 243, 1670, 1726 |
| NciI | CCSGG | 1 cut(s) | 2211 |
| NdeII | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| NlaIII | CATG | 6 cut(s) | 467, 1274, 1934, 2017, 2045, 2197 |
| NlaIV | GGNNCC | 6 cut(s) | 72, 940, 1005, 1054, 1477, 2011 |
| NmuCI | GTSAC | 1 cut(s) | 994 |
| NsiI | ATGCAT | 2 cut(s) | 1315, 2062 |
| NspI | RCATGY | 1 cut(s) | 2197 |
| NspV | TTCGAA | 1 cut(s) | 65 |
| PaeR7I | CTCGAG | 1 cut(s) | 661 |
| PciSI | GCTCTTC | 1 cut(s) | 375 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 36, 647 |
| PctI | GAATGC | 4 cut(s) | 752, 1395, 2060, 2124 |
| PfeI | GAWTC | 2 cut(s) | 113, 1426 |
| PkrI | GCNGC | 7 cut(s) | 659, 1533, 1570, 1612, 1663, 2199, 2286 |
| PleI | GAGTC | 3 cut(s) | 139, 525, 640 |
| PpsI | GAGTC | 3 cut(s) | 139, 525, 640 |
| PpuMI | RGGWCCY | 3 cut(s) | 70, 938, 2009 |
| Psp124BI | GAGCTC | 1 cut(s) | 931 |
| Psp5II | RGGWCCY | 3 cut(s) | 70, 938, 2009 |
| Psp6I | CCWGG | 3 cut(s) | 1471, 1478, 1981 |
| PspFI | CCCAGC | 1 cut(s) | 385 |
| PspGI | CCWGG | 3 cut(s) | 1471, 1478, 1981 |
| PspN4I | GGNNCC | 6 cut(s) | 72, 940, 1005, 1054, 1477, 2011 |
| PspPI | GGNCC | 8 cut(s) | 70, 938, 948, 1163, 1475, 1898, 1969, 2009 |
| PspPPI | RGGWCCY | 3 cut(s) | 70, 938, 2009 |
| PspXI | VCTCGAGB | 1 cut(s) | 661 |
| PstI | CTGCAG | 1 cut(s) | 1612 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1918 |
| PsuI | RGATCY | 1 cut(s) | 1130 |
| PvuII | CAGCTG | 3 cut(s) | 1531, 1568, 1661 |
| RsaI | GTAC | 2 cut(s) | 969, 1054 |
| RsaNI | GTAC | 2 cut(s) | 968, 1053 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1679 |
| SacI | GAGCTC | 1 cut(s) | 931 |
| SapI | GCTCTTC | 1 cut(s) | 375 |
| SaqAI | TTAA | 5 cut(s) | 150, 255, 483, 2102, 2205 |
| SatI | GCNGC | 7 cut(s) | 658, 1532, 1569, 1611, 1662, 2198, 2285 |
| Sau3AI | GATC | 8 cut(s) | 40, 88, 415, 1044, 1130, 1267, 1489, 1582 |
| Sau96I | GGNCC | 8 cut(s) | 70, 938, 948, 1163, 1475, 1898, 1969, 2009 |
| SchI | GAGTC | 3 cut(s) | 140, 526, 641 |
| ScrFI | CCNGG | 4 cut(s) | 1473, 1480, 1983, 2211 |
| SduI | GDGCHC | 3 cut(s) | 12, 931, 1278 |
| SexAI | ACCWGGT | 1 cut(s) | 1981 |
| SfaNI | GCATC | 8 cut(s) | 778, 871, 1011, 1300, 1322, 1510, 1707, 2225 |
| SfcI | CTRYAG | 1 cut(s) | 1608 |
| Sfr274I | CTCGAG | 1 cut(s) | 661 |
| SfuI | TTCGAA | 1 cut(s) | 65 |
| SinI | GGWCC | 7 cut(s) | 70, 938, 948, 1163, 1475, 1898, 2009 |
| SlaI | CTCGAG | 1 cut(s) | 661 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1679 |
| SmlI | CTYRAG | 2 cut(s) | 661, 962 |
| SmoI | CTYRAG | 2 cut(s) | 661, 962 |
| SsiI | CCGC | 3 cut(s) | 884, 1587, 1844 |
| SspMI | CTAG | 2 cut(s) | 44, 603 |
| SstI | GAGCTC | 1 cut(s) | 931 |
| StyD4I | CCNGG | 4 cut(s) | 1471, 1478, 1981, 2209 |
| StyI | CCWWGG | 3 cut(s) | 999, 1048, 2113 |
| TaaI | ACNGT | 6 cut(s) | 295, 307, 1776, 1881, 2153, 2241 |
| TaiI | ACGT | 3 cut(s) | 107, 1907, 2190 |
| TaqI | TCGA | 7 cut(s) | 30, 39, 65, 650, 662, 1043, 2126 |
| TfiI | GAWTC | 2 cut(s) | 113, 1426 |
| Tru1I | TTAA | 5 cut(s) | 150, 255, 483, 2102, 2205 |
| Tru9I | TTAA | 5 cut(s) | 150, 255, 483, 2102, 2205 |
| TscAI | CASTG | 2 cut(s) | 685, 1681 |
| TseFI | GTSAC | 1 cut(s) | 994 |
| TseI | GCWGC | 7 cut(s) | 657, 1531, 1568, 1610, 1661, 2197, 2284 |
| Tsp45I | GTSAC | 1 cut(s) | 994 |
| TspGWI | ACGGA | 1 cut(s) | 1125 |
| TspRI | CASTG | 2 cut(s) | 685, 1681 |
| VpaK11BI | GGWCC | 7 cut(s) | 70, 938, 948, 1163, 1475, 1898, 2009 |
| XapI | RAATTY | 6 cut(s) | 61, 249, 421, 888, 1352, 1885 |
| XceI | RCATGY | 1 cut(s) | 2197 |
| XhoI | CTCGAG | 1 cut(s) | 661 |
| XspI | CTAG | 2 cut(s) | 44, 603 |
| Zsp2I | ATGCAT | 2 cut(s) | 1315, 2062 |