Prupe.3G236100_v2.0.a1

Regulator of Vps4 activity in the MVB pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0013512
Physical Location & Seq
Forward (+)
23101890 .. 23105382
3493 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G236100.2

Sequence Viewer

Length: 1923 bp
ATGTTCGACATCTTGTTCGGGTGGCGAAAAGCTTCAAAATGCAAGAAGCTGATCAAACAGGTCCAGTGCCGGCTCAAGTTGCTGAAGAACAAGAGGCAGACAATTGTGAGGCAATTGCGCGAAGACGTGGCGGAGCTGATCAAACATGGCCACGAAGACAAAGCCTTCAACAGGGTTGGACAGATAATCAAAGATGAATGCATAGTGGCAGTGTATGAATTGTTGGACAATTTCTGTGAATTCATCCTCATCCATCTTCCTTACATCCGCAGACACAAGGACTGTCCAAATGACATTAACGAAGCAGTTTCGAGTCTTATATATGCTTCTGCAAGATGTGGGGATCTCCCTGAGCTTAGGGTGATCAGGAAGCTCTTTGGTGAACGATATGGGCAGAAATTTGCAGTAACTGCTCTTGAACTATTCCCTGGGAATCTTGTGAACCGTCAGTTGATTGAGAAACTCTCCCCAAAGTCAGTGACAGATGATATGAAGCAAAGATTGGTCAATGAAATAGCCAGGAATTACTGCATCAAACCAGAGGTCTTAGCAATTGAGTACTATTCTGAATGGCAACAAAAGGTGAAAGAAATTGGCGGACTTAGAGTACTTGATACAGATGTTCAGACATATTATGAAGGAACTGAAAGATCTGAATTGCAAATTGTAAATGTGGAGGAGATAGAACGAGAAGTCGTAGATGTTGATTCTAATGTATCTAGTACTTCTGCTAGTTCTTCATTAGCTATGCAAGTTGGCCCAACTATATCGGAGTCTTTAATGCATGATAAGCCACAGATTGAAGAGAATTGTGCTGAAGTTGATTCTCCAAGTATGTCTACTGTGGGCACTGAAGAAAGTCAGAGCAGTACTGTTGGCAGCACAACAAGAGATGGAGATATAGTGATTTACATGGATGACATAGAAGAAGTTCAATCATTTACAGCAAGAAGAGATGGAGACTCCCAGGACCAAAGAATTTTCAAGTTCAAAGCTATCGAACCCAAGAGGGAGAATCTTGAAAGCAGTTGTGATCTGAGTTATGCGGATTGTTATGAAACATGGAGTGAGAGTTCAGAGTCAAAAAGCTCCAGGAGACGTTGGAAAGGAAGTGGGAAAAGGCCGCGGAAGAGATCAGTGTGTCAGGAAAACCAATGCTTGAAGGATAATGAATGTTTAAGTTACTATGGCAGAAAGCAGCAGAAGAAAACTGTGGTGGGGGAAATTGAAAGTTCATATTCTGCACAGAAGAGTCTGAAGCAACCTTGTCACATGAAAATGGGAGCTAGCATTTTGTCATGCCAGTGTGGATGTGATGGAAAGAGACTAGGCTGTGGCTGCAGCCTTGAACATCCATGTTACTTTTGCACTGGCAATGGCAACAATGTTGATTGTCATGTTCTGCCATGGAAGCAAAAGAGAGGAATTACAACTAGGGTGGGAGTTTCAACTCATGGCCGTGAAGTACAATTGAACAAGGGAATGGAATGGCCTGATGTGCCCCAGGAACCAATGAGGAGGAGGAGCTGTGGCAATGAAGCTATGGTGTACAATGTTTTCACATATCCAGATCACCACCAACCAACTATGCAAAACAAAGTGCCCAGAGAAACCGTGGAGGAATTGGAATCAAGTATTCAATGCAGGCGTGCCTCGTGTAGTTCCACCTCTCCAAATGTGGTTAGTTCTTGGAGCACAAGAAAAGAAATGGTGCCCCCTTATATGAGAGCCGTGACTATGCCACCGGAAAGAGCAAAGGACAATCACAAAGATGACTTCCAACGATCCTTTTCAGATGCCTTCCAATATCCCACTCATGTTCACCCCAAATTGCCCGACTATGATGATATAGCAGCTAAATTCATGGCACTCAAGAAAGAGAGACTGCAAAGTAAGCCTCATTGCAGCAACCGGCAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Ist1

Protein Analysis

641

Amino Acids

73.26

Weight (kDa)

8.03

Isoelectric Point (pI)

61.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013512)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14830
fragaria_vesca FvH4_6g45140
malus_domestica MD09G1088800.v1.1 MD17G1078700.v1.1
prunus_persica Prupe.3G236100_v2.0.a1 Prupe.3G236100_v2.0.a1 Prupe.5G187400_v2.0.a1
pyrus_communis pycom09g01460
rosa_chinensis RchiOBHm_Chr2g0162561
rosa_laevigata RLG00000021352
rosa_roxburghii Rroxscaffold_2G00087830
rosa_rugosa Rorug02G0498400
rosa_samantha Rh2AG564400 Rh2BG577000 Rh2BG577100 Rh2CG547000 Rh2DG586900
rosa_wichuraiana Rw2G046690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1711
AccI GTMKAC 1 cut(s) 839
AccII CGCG 2 cut(s) 120, 1126
AciI CCGC 6 cut(s) 131, 268, 597, 1046, 1124, 1126
AclWI GGATC 2 cut(s) 351, 1779
AcoI YGGCCR 2 cut(s) 148, 1456
AcsI RAATTY 4 cut(s) 239, 398, 978, 1859
AcuI CTGAAG 4 cut(s) 104, 837, 873, 1277
AfaI GTAC 6 cut(s) 560, 609, 724, 871, 1467, 1550
AfiI CCNNNNNNNGG 1 cut(s) 171
AjiI CACGTC 1 cut(s) 127
AjnI CCWGG 5 cut(s) 427, 518, 966, 1091, 1503
AjuI GAANNNNNNNTTGG 2 cut(s) 485, 517
AloI GAACNNNNNNTCC 2 cut(s) 1057, 1089
Alw21I GWGCWC 1 cut(s) 1697
Alw26I GTCTC 4 cut(s) 954, 1090, 1318, 1876
AlwI GGATC 2 cut(s) 351, 1779
AlwNI CAGNNNCTG 1 cut(s) 410
AoxI GGCC 5 cut(s) 148, 757, 1121, 1456, 1490
ApeKI GCWGC 6 cut(s) 879, 1198, 1338, 1341, 1853, 1905
ApoI RAATTY 4 cut(s) 239, 398, 978, 1859
ArsI GACNNNNNNTTYG 3 cut(s) 31, 528, 560
Asp700I GAANNNNTTC 2 cut(s) 31, 930
AspLEI GCGC 1 cut(s) 120
AspS9I GGNCC 3 cut(s) 61, 758, 970
AsuHPI GGTGA 5 cut(s) 373, 392, 595, 1565, 1814
AsuNHI GCTAGC 1 cut(s) 1286
AvaII GGWCC 2 cut(s) 61, 970
BaeGI GKGCMC 4 cut(s) 851, 1503, 1605, 1716
BaeI ACNNNNGTAYC 2 cut(s) 606, 639
BalI TGGCCA 1 cut(s) 150
BanI GGYRCC 1 cut(s) 1711
BauI CACGAG 1 cut(s) 1654
BbsI GAAGAC 2 cut(s) 129, 162
Bbv12I GWGCWC 1 cut(s) 1697
BbvI GCAGC 6 cut(s) 891, 1210, 1325, 1353, 1865, 1917
BccI CCATC 4 cut(s) 261, 887, 950, 1310
BceAI ACGGC 2 cut(s) 1443, 1715
BciT130I CCWGG 5 cut(s) 429, 520, 968, 1093, 1505
BclI TGATCA 3 cut(s) 51, 138, 363
BcoDI GTCTC 4 cut(s) 954, 1090, 1318, 1876
BfaI CTAG 5 cut(s) 720, 732, 1287, 1328, 1434
BfmI CTRYAG 1 cut(s) 1339
BglII AGATCT 1 cut(s) 650
BisI GCNGC 7 cut(s) 880, 1124, 1199, 1339, 1342, 1854, 1906
BlsI GCNGC 7 cut(s) 881, 1125, 1200, 1340, 1343, 1855, 1907
BmcAI AGTACT 4 cut(s) 560, 609, 724, 871
Bme1390I CCNGG 5 cut(s) 429, 520, 968, 1093, 1505
Bme18I GGWCC 2 cut(s) 61, 970
BmgBI CACGTC 1 cut(s) 127
BmgT120I GGNCC 3 cut(s) 61, 758, 970
BmiI GGNNCC 2 cut(s) 1509, 1713
BmrFI CCNGG 5 cut(s) 429, 520, 968, 1093, 1505
BmsI GCATC 2 cut(s) 540, 1786
BmtI GCTAGC 1 cut(s) 1290
BpiI GAAGAC 2 cut(s) 129, 162
BplI GAGNNNNNCTC 2 cut(s) 449, 481
BpmI CTGGAG 1 cut(s) 1075
Bpu10I CCTNAGC 2 cut(s) 351, 356
BpuEI CTTGAG 2 cut(s) 59, 1856
BsaJI CCNNGG 7 cut(s) 427, 428, 966, 1124, 1406, 1503, 1614
BsaWI WCCGGW 1 cut(s) 1744
BsaXI ACNNNNNCTCC 6 cut(s) 888, 918, 1057, 1087, 1513, 1543
Bsc4I CCNNNNNNNGG 1 cut(s) 171
Bse118I RCCGGY 2 cut(s) 69, 1911
Bse1I ACTGG 3 cut(s) 64, 1303, 1375
Bse3DI GCAATG 3 cut(s) 1381, 1540, 1900
BseBI CCWGG 5 cut(s) 429, 520, 968, 1093, 1505
BseDI CCNNGG 7 cut(s) 427, 428, 966, 1124, 1406, 1503, 1614
BseGI GGATG 6 cut(s) 243, 249, 264, 922, 1316, 1351
BseLI CCNNNNNNNGG 1 cut(s) 171
BseMI GCAATG 3 cut(s) 1381, 1540, 1900
BseMII CTCAG 2 cut(s) 342, 1028
BseNI ACTGG 3 cut(s) 64, 1303, 1375
BseRI GAGGAG 4 cut(s) 692, 1531, 1534, 1537
BseSI GKGCMC 4 cut(s) 851, 1503, 1605, 1716
BseXI GCAGC 6 cut(s) 891, 1210, 1325, 1353, 1865, 1917
BsgI GTGCAG 1 cut(s) 1227
Bsh1236I CGCG 2 cut(s) 120, 1126
BshFI GGCC 5 cut(s) 150, 759, 1123, 1458, 1492
BshNI GGYRCC 1 cut(s) 1711
BsiHKAI GWGCWC 1 cut(s) 1697
BsiSI CCGG 3 cut(s) 70, 1745, 1912
BslI CCNNNNNNNGG 1 cut(s) 171
BsmAI GTCTC 4 cut(s) 954, 1090, 1318, 1876
BsmBI CGTCTC 1 cut(s) 1090
BsmI GAATGC 1 cut(s) 203
BsnI GGCC 5 cut(s) 150, 759, 1123, 1458, 1492
Bsp1286I GDGCHC 5 cut(s) 851, 1503, 1605, 1697, 1716
Bsp1407I TGTACA 1 cut(s) 1548
Bsp143I GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
Bsp19I CCATGG 1 cut(s) 1406
BspACI CCGC 6 cut(s) 131, 268, 597, 1046, 1124, 1126
BspANI GGCC 5 cut(s) 150, 759, 1123, 1458, 1492
BspCNI CTCAG 2 cut(s) 343, 1029
BspFNI CGCG 2 cut(s) 120, 1126
BspLI GGNNCC 2 cut(s) 1509, 1713
BspMAI CTGCAG 1 cut(s) 1343
BspOI GCTAGC 1 cut(s) 1290
BspPI GGATC 2 cut(s) 351, 1779
BspT107I GGYRCC 1 cut(s) 1711
BsrDI GCAATG 3 cut(s) 1381, 1540, 1900
BsrFI RCCGGY 2 cut(s) 69, 1911
BsrGI TGTACA 1 cut(s) 1548
BsrI ACTGG 3 cut(s) 64, 1303, 1375
BssAI RCCGGY 2 cut(s) 69, 1911
BssECI CCNNGG 7 cut(s) 427, 428, 966, 1124, 1406, 1503, 1614
BssMI GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
BssSI CACGAG 1 cut(s) 1654
BssT1I CCWWGG 1 cut(s) 1406
Bst2BI CACGAG 1 cut(s) 1654
Bst2UI CCWGG 5 cut(s) 429, 520, 968, 1093, 1505
Bst4CI ACNGT 6 cut(s) 284, 446, 844, 874, 1213, 1615
Bst6I CTCTTC 4 cut(s) 798, 946, 1124, 1244
BstAPI GCANNNNNTGC 1 cut(s) 410
BstAUI TGTACA 1 cut(s) 1548
BstC8I GCNNGC 4 cut(s) 71, 1288, 1646, 1650
BstDEI CTNAG 5 cut(s) 351, 356, 547, 602, 1037
BstDSI CCRYGG 3 cut(s) 1124, 1406, 1614
BstENI CCTNNNNNAGG 1 cut(s) 169
BstF5I GGATG 6 cut(s) 243, 249, 264, 922, 1316, 1351
BstFNI CGCG 2 cut(s) 120, 1126
BstHHI GCGC 1 cut(s) 120
BstKTI GATC 9 cut(s) 54, 141, 346, 366, 653, 1036, 1136, 1573, 1787
BstMAI GTCTC 4 cut(s) 954, 1090, 1318, 1876
BstMBI GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
BstMWI GCNNNNNNNGC 7 cut(s) 79, 410, 790, 1338, 1411, 1498, 1894
BstNI CCWGG 5 cut(s) 429, 520, 968, 1093, 1505
BstSCI CCNGG 5 cut(s) 427, 518, 966, 1091, 1503
BstSFI CTRYAG 1 cut(s) 1339
BstSLI GKGCMC 4 cut(s) 851, 1503, 1605, 1716
BstUI CGCG 2 cut(s) 120, 1126
BstV1I GCAGC 6 cut(s) 891, 1210, 1325, 1353, 1865, 1917
BstV2I GAAGAC 2 cut(s) 129, 162
BstX2I RGATCY 2 cut(s) 343, 650
BstYI RGATCY 2 cut(s) 343, 650
BsuRI GGCC 5 cut(s) 150, 759, 1123, 1458, 1492
BtgI CCRYGG 3 cut(s) 1124, 1406, 1614
BtrI CACGTC 1 cut(s) 127
BtsCI GGATG 6 cut(s) 243, 249, 264, 922, 1316, 1351
BtsI GCAGTG 1 cut(s) 216
BtsIMutI CAGTG 7 cut(s) 71, 216, 483, 849, 1143, 1310, 1368
Cac8I GCNNGC 4 cut(s) 71, 1288, 1646, 1650
CaiI CAGNNNCTG 1 cut(s) 410
CfoI GCGC 1 cut(s) 120
Cfr10I RCCGGY 2 cut(s) 69, 1911
Cfr13I GGNCC 3 cut(s) 61, 758, 970
Cfr42I CCGCGG 1 cut(s) 1127
Csp6I GTAC 6 cut(s) 559, 608, 723, 870, 1466, 1549
CspCI CAANNNNNGTGG 2 cut(s) 1419, 1454
CviQI GTAC 6 cut(s) 559, 608, 723, 870, 1466, 1549
DdeI CTNAG 5 cut(s) 351, 356, 547, 602, 1037
DpnI GATC 9 cut(s) 53, 140, 345, 365, 652, 1035, 1135, 1572, 1786
DpnII GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
EaeI YGGCCR 2 cut(s) 148, 1456
Eam1104I CTCTTC 4 cut(s) 798, 946, 1124, 1244
EarI CTCTTC 4 cut(s) 798, 946, 1124, 1244
EciI GGCGGA 2 cut(s) 146, 612
Eco130I CCWWGG 1 cut(s) 1406
Eco47I GGWCC 2 cut(s) 61, 970
Eco57I CTGAAG 4 cut(s) 104, 837, 873, 1277
EcoNI CCTNNNNNAGG 1 cut(s) 169
EcoRI GAATTC 1 cut(s) 239
EcoRII CCWGG 5 cut(s) 427, 518, 966, 1091, 1503
EcoT14I CCWWGG 1 cut(s) 1406
EcoT22I ATGCAT 2 cut(s) 203, 786
ErhI CCWWGG 1 cut(s) 1406
Esp3I CGTCTC 1 cut(s) 1090
FbaI TGATCA 3 cut(s) 51, 138, 363
FblI GTMKAC 1 cut(s) 839
Fnu4HI GCNGC 7 cut(s) 880, 1124, 1199, 1339, 1342, 1854, 1906
FokI GGATG 6 cut(s) 230, 236, 251, 929, 1323, 1338
Fsp4HI GCNGC 7 cut(s) 880, 1124, 1199, 1339, 1342, 1854, 1906
FspBI CTAG 5 cut(s) 720, 732, 1287, 1328, 1434
GlaI GCGC 1 cut(s) 119
GluI GCNGC 7 cut(s) 880, 1124, 1199, 1339, 1342, 1854, 1906
GsuI CTGGAG 1 cut(s) 1075
HaeIII GGCC 5 cut(s) 150, 759, 1123, 1458, 1492
HapII CCGG 3 cut(s) 70, 1745, 1912
HhaI GCGC 1 cut(s) 120
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HindIII AAGCTT 1 cut(s) 30
HpaII CCGG 3 cut(s) 70, 1745, 1912
HphI GGTGA 5 cut(s) 373, 392, 595, 1565, 1814
Hpy166II GTNNAC 5 cut(s) 383, 442, 840, 1549, 1822
Hpy188I TCNGA 9 cut(s) 568, 627, 655, 772, 864, 1038, 1078, 1257, 1795
Hpy188III TCNNGA 6 cut(s) 367, 416, 1019, 1145, 1568, 1873
Hpy8I GTNNAC 5 cut(s) 383, 442, 840, 1549, 1822
HpyAV CCTTC 4 cut(s) 175, 632, 1156, 1810
HpyCH4III ACNGT 6 cut(s) 284, 446, 844, 874, 1213, 1615
HpyCH4IV ACGT 2 cut(s) 126, 1099
HpyF10VI GCNNNNNNNGC 7 cut(s) 79, 410, 790, 1338, 1411, 1498, 1894
HpyF3I CTNAG 5 cut(s) 351, 356, 547, 602, 1037
HpySE526I ACGT 2 cut(s) 126, 1099
HspAI GCGC 1 cut(s) 118
KroI GCCGGC 1 cut(s) 69
KroNI GCCGGC 1 cut(s) 71
Ksp22I TGATCA 3 cut(s) 51, 138, 363
KspI CCGCGG 1 cut(s) 1127
Kzo9I GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
LmnI GCTCC 5 cut(s) 133, 1094, 1283, 1524, 1692
Lsp1109I GCAGC 6 cut(s) 891, 1210, 1325, 1353, 1865, 1917
LweI GCATC 2 cut(s) 540, 1786
MaeI CTAG 5 cut(s) 720, 732, 1287, 1328, 1434
MaeII ACGT 2 cut(s) 126, 1099
MaeIII GTNAC 6 cut(s) 406, 478, 1181, 1268, 1358, 1732
MalI GATC 9 cut(s) 53, 140, 345, 365, 652, 1035, 1135, 1572, 1786
MboI GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
MfeI CAATTG 4 cut(s) 102, 113, 552, 1469
MflI RGATCY 2 cut(s) 343, 650
MhlI GDGCHC 5 cut(s) 851, 1503, 1605, 1697, 1716
MlsI TGGCCA 1 cut(s) 150
MluNI TGGCCA 1 cut(s) 150
MlyI GAGTC 5 cut(s) 322, 782, 956, 1088, 1261
MmeI TCCRAC 4 cut(s) 157, 204, 1082, 1804
Mox20I TGGCCA 1 cut(s) 150
Mph1103I ATGCAT 2 cut(s) 203, 786
MroNI GCCGGC 1 cut(s) 69
MroXI GAANNNNTTC 2 cut(s) 31, 930
MscI TGGCCA 1 cut(s) 150
MseI TTAA 3 cut(s) 297, 779, 1178
MslI CAYNNNNRTG 4 cut(s) 1277, 1303, 1458, 1770
Msp20I TGGCCA 1 cut(s) 150
MspA1I CMGCKG 1 cut(s) 1126
MspI CCGG 3 cut(s) 70, 1745, 1912
MspR9I CCNGG 5 cut(s) 429, 520, 968, 1093, 1505
MunI CAATTG 4 cut(s) 102, 113, 552, 1469
Mva1269I GAATGC 1 cut(s) 203
MvaI CCWGG 5 cut(s) 429, 520, 968, 1093, 1505
MvnI CGCG 2 cut(s) 120, 1126
MwoI GCNNNNNNNGC 7 cut(s) 79, 410, 790, 1338, 1411, 1498, 1894
NaeI GCCGGC 1 cut(s) 71
NcoI CCATGG 1 cut(s) 1406
NdeII GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
NgoMIV GCCGGC 1 cut(s) 69
NheI GCTAGC 1 cut(s) 1286
NlaIV GGNNCC 2 cut(s) 1509, 1713
NmuCI GTSAC 3 cut(s) 478, 1268, 1732
NsiI ATGCAT 2 cut(s) 203, 786
PasI CCCWGGG 1 cut(s) 428
PctI GAATGC 1 cut(s) 203
PdiI GCCGGC 1 cut(s) 71
PdmI GAANNNNTTC 2 cut(s) 31, 930
PfeI GAWTC 5 cut(s) 433, 707, 824, 1015, 1628
PfoI TCCNGGA 1 cut(s) 1091
PkrI GCNGC 7 cut(s) 881, 1125, 1200, 1340, 1343, 1855, 1907
PleI GAGTC 5 cut(s) 321, 781, 956, 1087, 1260
PpsI GAGTC 5 cut(s) 321, 781, 956, 1087, 1260
Psp6I CCWGG 5 cut(s) 427, 518, 966, 1091, 1503
PspGI CCWGG 5 cut(s) 427, 518, 966, 1091, 1503
PspN4I GGNNCC 2 cut(s) 1509, 1713
PspPI GGNCC 3 cut(s) 61, 758, 970
PstI CTGCAG 1 cut(s) 1343
PstNI CAGNNNCTG 1 cut(s) 410
PsuI RGATCY 2 cut(s) 343, 650
RsaI GTAC 6 cut(s) 560, 609, 724, 871, 1467, 1550
RsaNI GTAC 6 cut(s) 559, 608, 723, 870, 1466, 1549
RseI CAYNNNNRTG 4 cut(s) 1277, 1303, 1458, 1770
SacII CCGCGG 1 cut(s) 1127
SaqAI TTAA 3 cut(s) 297, 779, 1178
SatI GCNGC 7 cut(s) 880, 1124, 1199, 1339, 1342, 1854, 1906
Sau3AI GATC 9 cut(s) 51, 138, 343, 363, 650, 1033, 1133, 1570, 1784
Sau96I GGNCC 3 cut(s) 61, 758, 970
ScaI AGTACT 4 cut(s) 560, 609, 724, 871
SchI GAGTC 5 cut(s) 322, 782, 956, 1088, 1261
ScrFI CCNGG 5 cut(s) 429, 520, 968, 1093, 1505
SduI GDGCHC 5 cut(s) 851, 1503, 1605, 1697, 1716
SfaNI GCATC 2 cut(s) 540, 1786
SfcI CTRYAG 1 cut(s) 1339
Sfr303I CCGCGG 1 cut(s) 1127
SgrBI CCGCGG 1 cut(s) 1127
SinI GGWCC 2 cut(s) 61, 970
SmiMI CAYNNNNRTG 4 cut(s) 1277, 1303, 1458, 1770
SmlI CTYRAG 2 cut(s) 74, 1871
SmoI CTYRAG 2 cut(s) 74, 1871
SsiI CCGC 6 cut(s) 131, 268, 597, 1046, 1124, 1126
SspMI CTAG 5 cut(s) 720, 732, 1287, 1328, 1434
StyD4I CCNGG 5 cut(s) 427, 518, 966, 1091, 1503
StyI CCWWGG 1 cut(s) 1406
TaaI ACNGT 6 cut(s) 284, 446, 844, 874, 1213, 1615
TaiI ACGT 2 cut(s) 129, 1102
TaqI TCGA 3 cut(s) 6, 311, 999
TatI WGTACW 6 cut(s) 558, 607, 722, 869, 1465, 1548
TauI GCSGC 1 cut(s) 1126
TfiI GAWTC 5 cut(s) 433, 707, 824, 1015, 1628
Tru1I TTAA 3 cut(s) 297, 779, 1178
Tru9I TTAA 3 cut(s) 297, 779, 1178
TscAI CASTG 7 cut(s) 71, 216, 483, 856, 1143, 1310, 1375
TseFI GTSAC 3 cut(s) 478, 1268, 1732
TseI GCWGC 6 cut(s) 879, 1198, 1338, 1341, 1853, 1905
Tsp45I GTSAC 3 cut(s) 478, 1268, 1732
TspRI CASTG 7 cut(s) 71, 216, 483, 856, 1143, 1310, 1375
VpaK11BI GGWCC 2 cut(s) 61, 970
XagI CCTNNNNNAGG 1 cut(s) 169
XapI RAATTY 4 cut(s) 239, 398, 978, 1859
XcmI CCANNNNNNNNNTGG 1 cut(s) 1612
XmiI GTMKAC 1 cut(s) 839
XmnI GAANNNNTTC 2 cut(s) 31, 930
XspI CTAG 5 cut(s) 720, 732, 1287, 1328, 1434
ZrmI AGTACT 4 cut(s) 560, 609, 724, 871
Zsp2I ATGCAT 2 cut(s) 203, 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.