Rroxscaffold_2G00087830

Regulator of Vps4 activity in the MVB pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0013512
Physical Location & Seq
Reverse (-)
9887492 .. 9890487
2996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00087830.1

Sequence Viewer

Length: 1674 bp
ATGTTTGACATATTGTTCGGGTGGAGAAAAGCTTCAAAGTGCAAGCAGCTGATCAAACAGGTGCAGTGCCGGCTCAAGTTGCTGAAGAACAAGAGGGCTACTATTGTGAGGCAATTGCGAGAAGACGCGGCGGAGCTGATCAAGAATGGCTACGAAGGCAAAGCCTTCAATAGGGTTGAGCAGATAATCAAAGATGAATGCATAGTGGCAGTGTATGAACTGTTGGATAATTTCTGTGAATTTATCCTCCTTCACCTTTCATATATCCGAAGACACAATAATTTCATCAGGGACTGTCCAAATGACATAAATGAAGCAGTTTCAAGTCTTATATATGCTTCTGCTAGATGTGGAGATCTCCCTGAGCTTAGAACAATCCGAAAGCTCTTTGGAGAACGTTATGGTCAGAAATATGCAATGACTGCTCTTGAACTATTCCCCGGGAACCTTGTGAACTGTCAGGTAATAGAGAAACTGTCCCTAAAGTCAGTAACAGATGATATGAAGCACAGATTGATCAATGAAATAGCAAGGAATTACTGCATCAAACCAGAGGTTTTAGCCATTGAATACTATTCCGATTGGCAACAGAAGATAAAGGAAATTAGTGGACATCAAGCACTGGATTCAAATGTTCAGACTTATTACGAAAGATCTGAAGTGCAAATTTGCTCTGTCGAAGGGCTTGAAACTGAAGATGTTCATGATTCCAGTATATCTACTACTACTTCTTCAGTAGCTAAGCTAGCCCCGACTATATCAGACTCTCCAGTGCATAATGAAATACAGGAAGAACAGCACTTTGCTGAAGTGGATTCTCCAAGGGGTGGAGAAATAGTGGTGTACAATGATGACATTGAAGAGGTTCAGTCTTGCACAACAAGAGATGGAGATGACTGCCAGGACCAAAGAGCTTTCAAGTTCAAAGCTAGTGTTCCGAAAAAGGAGAATCTTGAAAACAGCTTTGATCGTGGTCATGTGAACACATGGAGTGTGAATTCAGGGTCAAGAGTCTCTACGAGAAGTTTTGGGGGAAATGGGAAAAGACCAAGGAAGAGATCAGTGTCTCAGGAAAATCAGTTTTCGAAGGATAGTGAATTTCCAAGTTACTATGCTAGGAAGCATCAGAAGAAATTGGGACCTAACATTTTGTCATGCAAGTGCAGCCTGGTAAATCCATGTTATGTTTGCAATGGGAAAGAAAATGTCGAATTTGAAGTTCCAACATTGAAGCAAAATAGAGGGATTTCAACTAGGGTGGGATTTGCTAATTCTGGTCATGAACATAGAAGTCTGGTGTACAATGTTTTCACTTACCCTGATCACCAGCCAAAACAGCAAAGCAAAGTGTTCAAAGGAAACATGGAGGAATCTGGTTTTCAATGCAAGCTTCCCTCTTATACTTCGTCTTCATCATCATCATCTTCTCCAACTGTGACTAGTTCTTGGACGAGAAAAGAAATGGTACCTCCTTACTTCAGAAATGCGACAATGCCGCCTGAAAGAGTCAACGACAAGCGGAAAGAAGAGTTTCAACGATCCATTTCGGACTGTTTTCAGTATCCTACTCATGTTCATCCAAAGCTGCCAGATTATGATGATATTGCAGCTAAATTCATGGCTCTCAAGAAAGAACGTCTGCAAACTAAGCCTCCTCTCAGCAATCAGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Ist1

Protein Analysis

557

Amino Acids

63.84

Weight (kDa)

8.5

Isoelectric Point (pI)

46.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ist1 PF03398 15 - 182 1.8e-49 Regulator of Vps4 activity in the MVB pathway
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013512)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14830
fragaria_vesca FvH4_6g45140
malus_domestica MD09G1088800.v1.1 MD17G1078700.v1.1
prunus_persica Prupe.3G236100_v2.0.a1 Prupe.3G236100_v2.0.a1 Prupe.5G187400_v2.0.a1
pyrus_communis pycom09g01460
rosa_chinensis RchiOBHm_Chr2g0162561
rosa_laevigata RLG00000021352
rosa_roxburghii Rroxscaffold_2G00087830
rosa_rugosa Rorug02G0498400
rosa_samantha Rh2AG564400 Rh2BG577000 Rh2BG577100 Rh2CG547000 Rh2DG586900
rosa_wichuraiana Rw2G046690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1465
AccB1I GGYRCC 1 cut(s) 1465
AccB7I CCANNNNNTGG 1 cut(s) 827
AccII CGCG 1 cut(s) 128
AciI CCGC 4 cut(s) 128, 131, 1496, 1519
AclI AACGTT 1 cut(s) 397
AclWI GGATC 1 cut(s) 1533
AcsI RAATTY 6 cut(s) 239, 666, 997, 1097, 1211, 1613
AcuI CTGAAG 6 cut(s) 104, 678, 714, 717, 828, 1462
AfaI GTAC 3 cut(s) 845, 1301, 1467
AfiI CCNNNNNNNGG 2 cut(s) 171, 827
AhlI ACTAGT 1 cut(s) 1439
AjnI CCWGG 2 cut(s) 900, 1167
Alw26I GTCTC 2 cut(s) 1018, 1071
AlwI GGATC 1 cut(s) 1533
AlwNI CAGNNNCTG 1 cut(s) 294
Ama87I CYCGRG 1 cut(s) 440
ApeKI GCWGC 4 cut(s) 46, 1164, 1585, 1607
ApoI RAATTY 6 cut(s) 239, 666, 997, 1097, 1211, 1613
ArsI GACNNNNNNTTYG 1 cut(s) 31
Asp700I GAANNNNTTC 4 cut(s) 31, 699, 864, 1530
Asp718I GGTACC 1 cut(s) 1465
AspS9I GGNCC 2 cut(s) 904, 1139
AsuC2I CCSGG 2 cut(s) 441, 442
AsuHPI GGTGA 2 cut(s) 245, 1316
AsuII TTCGAA 1 cut(s) 1085
AsuNHI GCTAGC 1 cut(s) 745
AvaI CYCGRG 1 cut(s) 440
AvaII GGWCC 2 cut(s) 904, 1139
BanI GGYRCC 1 cut(s) 1465
BbsI GAAGAC 3 cut(s) 129, 277, 1401
BbvI GCAGC 4 cut(s) 58, 1176, 1572, 1619
BccI CCATC 1 cut(s) 881
BciT130I CCWGG 2 cut(s) 902, 1169
BciVI GTATCC 1 cut(s) 1572
BclI TGATCA 4 cut(s) 51, 138, 516, 1321
BcnI CCSGG 2 cut(s) 441, 442
BcoDI GTCTC 2 cut(s) 1018, 1071
BcuI ACTAGT 1 cut(s) 1439
BfaI CTAG 6 cut(s) 345, 746, 930, 1116, 1254, 1440
BfuI GTATCC 1 cut(s) 1572
BglII AGATCT 2 cut(s) 355, 653
BisI GCNGC 6 cut(s) 47, 129, 1165, 1496, 1586, 1608
BlpI GCTNAGC 1 cut(s) 741
BlsI GCNGC 6 cut(s) 48, 130, 1166, 1497, 1587, 1609
Bme1390I CCNGG 4 cut(s) 441, 442, 902, 1169
Bme18I GGWCC 2 cut(s) 904, 1139
BmeT110I CYCGRG 1 cut(s) 440
BmgT120I GGNCC 2 cut(s) 904, 1139
BmiI GGNNCC 3 cut(s) 446, 1140, 1467
BmrFI CCNGG 4 cut(s) 441, 442, 902, 1169
BmsI GCATC 2 cut(s) 552, 1132
BmtI GCTAGC 1 cut(s) 749
BpiI GAAGAC 3 cut(s) 129, 277, 1401
BpmI CTGGAG 1 cut(s) 753
Bpu10I CCTNAGC 1 cut(s) 363
Bpu1102I GCTNAGC 1 cut(s) 741
Bpu14I TTCGAA 1 cut(s) 1085
BpuEI CTTGAG 2 cut(s) 59, 1610
BpuMI CCSGG 2 cut(s) 441, 442
BsaJI CCNNGG 4 cut(s) 439, 440, 821, 1049
BsaXI ACNNNNNCTCC 4 cut(s) 822, 852, 1636, 1666
Bsc4I CCNNNNNNNGG 2 cut(s) 171, 827
Bse118I RCCGGY 1 cut(s) 69
Bse1I ACTGG 3 cut(s) 627, 711, 770
Bse3DI GCAATG 2 cut(s) 423, 1198
BseBI CCWGG 2 cut(s) 902, 1169
BseDI CCNNGG 4 cut(s) 439, 440, 821, 1049
BseGI GGATG 1 cut(s) 1576
BseLI CCNNNNNNNGG 2 cut(s) 171, 827
BseMI GCAATG 2 cut(s) 423, 1198
BseMII CTCAG 3 cut(s) 354, 1082, 1672
BseNI ACTGG 3 cut(s) 627, 711, 770
BseRI GAGGAG 1 cut(s) 1644
BseXI GCAGC 4 cut(s) 58, 1176, 1572, 1619
BsgI GTGCAG 2 cut(s) 83, 1183
Bsh1236I CGCG 1 cut(s) 128
BshNI GGYRCC 1 cut(s) 1465
BsiHKCI CYCGRG 1 cut(s) 440
BsiSI CCGG 2 cut(s) 70, 441
BslFI GGGAC 3 cut(s) 305, 463, 1152
BslI CCNNNNNNNGG 2 cut(s) 171, 827
BsmAI GTCTC 2 cut(s) 1018, 1071
BsmFI GGGAC 3 cut(s) 305, 463, 1152
BsmI GAATGC 1 cut(s) 203
BsoBI CYCGRG 1 cut(s) 440
Bsp119I TTCGAA 1 cut(s) 1085
Bsp1407I TGTACA 2 cut(s) 843, 1299
Bsp143I GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
Bsp1720I GCTNAGC 1 cut(s) 741
BspACI CCGC 4 cut(s) 128, 131, 1496, 1519
BspCNI CTCAG 3 cut(s) 355, 1081, 1671
BspFNI CGCG 1 cut(s) 128
BspHI TCATGA 2 cut(s) 703, 1279
BspLI GGNNCC 3 cut(s) 446, 1140, 1467
BspOI GCTAGC 1 cut(s) 749
BspPI GGATC 1 cut(s) 1533
BspT104I TTCGAA 1 cut(s) 1085
BspT107I GGYRCC 1 cut(s) 1465
BsrDI GCAATG 2 cut(s) 423, 1198
BsrFI RCCGGY 1 cut(s) 69
BsrGI TGTACA 2 cut(s) 843, 1299
BsrI ACTGG 3 cut(s) 627, 711, 770
BssAI RCCGGY 1 cut(s) 69
BssECI CCNNGG 4 cut(s) 439, 440, 821, 1049
BssMI GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
BssT1I CCWWGG 2 cut(s) 821, 1049
Bst2UI CCWGG 2 cut(s) 902, 1169
Bst4CI ACNGT 6 cut(s) 222, 296, 458, 477, 1435, 1553
Bst6I CTCTTC 3 cut(s) 855, 1049, 1521
BstAPI GCANNNNNTGC 1 cut(s) 422
BstAUI TGTACA 2 cut(s) 843, 1299
BstBI TTCGAA 1 cut(s) 1085
BstC8I GCNNGC 4 cut(s) 44, 71, 747, 1388
BstDEI CTNAG 6 cut(s) 363, 368, 741, 1068, 1647, 1658
BstENI CCTNNNNNAGG 1 cut(s) 169
BstF5I GGATG 1 cut(s) 1576
BstFNI CGCG 1 cut(s) 128
BstKTI GATC 9 cut(s) 54, 141, 358, 519, 656, 970, 1061, 1324, 1541
BstMAI GTCTC 2 cut(s) 1018, 1071
BstMBI GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
BstMWI GCNNNNNNNGC 8 cut(s) 70, 79, 156, 422, 746, 1164, 1336, 1648
BstNI CCWGG 2 cut(s) 902, 1169
BstSCI CCNGG 4 cut(s) 439, 440, 900, 1167
BstUI CGCG 1 cut(s) 128
BstV1I GCAGC 4 cut(s) 58, 1176, 1572, 1619
BstV2I GAAGAC 3 cut(s) 129, 277, 1401
BstX2I RGATCY 2 cut(s) 355, 653
BstYI RGATCY 2 cut(s) 355, 653
BsuI GTATCC 1 cut(s) 1572
BtsCI GGATG 1 cut(s) 1576
BtsI GCAGTG 2 cut(s) 71, 216
BtsIMutI CAGTG 5 cut(s) 71, 216, 620, 777, 1068
Cac8I GCNNGC 4 cut(s) 44, 71, 747, 1388
CaiI CAGNNNCTG 1 cut(s) 294
CciI TCATGA 2 cut(s) 703, 1279
Cfr10I RCCGGY 1 cut(s) 69
Cfr13I GGNCC 2 cut(s) 904, 1139
Cfr9I CCCGGG 1 cut(s) 440
CseI GACGC 1 cut(s) 134
Csp6I GTAC 3 cut(s) 844, 1300, 1466
CspCI CAANNNNNGTGG 2 cut(s) 1239, 1274
CviAII CATG 9 cut(s) 704, 977, 987, 1155, 1179, 1280, 1363, 1571, 1618
CviQI GTAC 3 cut(s) 844, 1300, 1466
DdeI CTNAG 6 cut(s) 363, 368, 741, 1068, 1647, 1658
DpnI GATC 9 cut(s) 53, 140, 357, 518, 655, 969, 1060, 1323, 1540
DpnII GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
Eam1104I CTCTTC 3 cut(s) 855, 1049, 1521
EarI CTCTTC 3 cut(s) 855, 1049, 1521
EciI GGCGGA 1 cut(s) 146
Eco130I CCWWGG 2 cut(s) 821, 1049
Eco47I GGWCC 2 cut(s) 904, 1139
Eco57I CTGAAG 6 cut(s) 104, 678, 714, 717, 828, 1462
Eco88I CYCGRG 1 cut(s) 440
EcoNI CCTNNNNNAGG 1 cut(s) 169
EcoO109I RGGNCCY 1 cut(s) 1139
EcoRI GAATTC 1 cut(s) 997
EcoRII CCWGG 2 cut(s) 900, 1167
EcoT14I CCWWGG 2 cut(s) 821, 1049
EcoT22I ATGCAT 1 cut(s) 203
ErhI CCWWGG 2 cut(s) 821, 1049
FaeI CATG 9 cut(s) 707, 980, 990, 1158, 1182, 1283, 1366, 1574, 1621
FaqI GGGAC 3 cut(s) 305, 463, 1152
FatI CATG 9 cut(s) 703, 976, 986, 1154, 1178, 1279, 1362, 1570, 1617
FbaI TGATCA 4 cut(s) 51, 138, 516, 1321
Fnu4HI GCNGC 6 cut(s) 47, 129, 1165, 1496, 1586, 1608
FokI GGATG 1 cut(s) 1563
Fsp4HI GCNGC 6 cut(s) 47, 129, 1165, 1496, 1586, 1608
FspBI CTAG 6 cut(s) 345, 746, 930, 1116, 1254, 1440
GluI GCNGC 6 cut(s) 47, 129, 1165, 1496, 1586, 1608
GsuI CTGGAG 1 cut(s) 753
HapII CCGG 2 cut(s) 70, 441
HgaI GACGC 1 cut(s) 134
Hin1II CATG 9 cut(s) 707, 980, 990, 1158, 1182, 1283, 1366, 1574, 1621
HincII GTYRAC 1 cut(s) 1510
HindII GTYRAC 1 cut(s) 1510
HindIII AAGCTT 2 cut(s) 30, 1388
HinfI GANTC 8 cut(s) 626, 707, 764, 815, 949, 1011, 1370, 1506
HpaII CCGG 2 cut(s) 70, 441
HphI GGTGA 2 cut(s) 245, 1316
Hpy166II GTNNAC 6 cut(s) 454, 611, 844, 982, 1300, 1510
Hpy188III TCNNGA 8 cut(s) 142, 428, 704, 953, 1008, 1070, 1280, 1627
Hpy8I GTNNAC 6 cut(s) 454, 611, 844, 982, 1300, 1510
HpyAV CCTTC 5 cut(s) 149, 175, 260, 674, 1081
HpyCH4III ACNGT 6 cut(s) 222, 296, 458, 477, 1435, 1553
HpyCH4IV ACGT 2 cut(s) 397, 1636
HpyF10VI GCNNNNNNNGC 8 cut(s) 70, 79, 156, 422, 746, 1164, 1336, 1648
HpyF3I CTNAG 6 cut(s) 363, 368, 741, 1068, 1647, 1658
HpySE526I ACGT 2 cut(s) 397, 1636
Hsp92II CATG 9 cut(s) 707, 980, 990, 1158, 1182, 1283, 1366, 1574, 1621
KpnI GGTACC 1 cut(s) 1469
KroI GCCGGC 1 cut(s) 69
KroNI GCCGGC 1 cut(s) 71
Ksp22I TGATCA 4 cut(s) 51, 138, 516, 1321
Kzo9I GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
LmnI GCTCC 1 cut(s) 133
Lsp1109I GCAGC 4 cut(s) 58, 1176, 1572, 1619
LweI GCATC 2 cut(s) 552, 1132
MaeI CTAG 6 cut(s) 345, 746, 930, 1116, 1254, 1440
MaeII ACGT 2 cut(s) 397, 1636
MaeIII GTNAC 3 cut(s) 490, 1106, 1435
MalI GATC 9 cut(s) 53, 140, 357, 518, 655, 969, 1060, 1323, 1540
MboI GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
MfeI CAATTG 1 cut(s) 113
MflI RGATCY 2 cut(s) 355, 653
MlyI GAGTC 3 cut(s) 758, 1020, 1515
MmeI TCCRAC 3 cut(s) 204, 1247, 1454
Mph1103I ATGCAT 1 cut(s) 203
MroNI GCCGGC 1 cut(s) 69
MroXI GAANNNNTTC 4 cut(s) 31, 699, 864, 1530
MseI TTAA 1 cut(s) 1672
MslI CAYNNNNRTG 1 cut(s) 1159
MspA1I CMGCKG 1 cut(s) 49
MspI CCGG 2 cut(s) 70, 441
MspR9I CCNGG 4 cut(s) 441, 442, 902, 1169
MunI CAATTG 1 cut(s) 113
Mva1269I GAATGC 1 cut(s) 203
MvaI CCWGG 2 cut(s) 902, 1169
MvnI CGCG 1 cut(s) 128
MwoI GCNNNNNNNGC 8 cut(s) 70, 79, 156, 422, 746, 1164, 1336, 1648
NaeI GCCGGC 1 cut(s) 71
NciI CCSGG 2 cut(s) 441, 442
NdeII GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
NgoMIV GCCGGC 1 cut(s) 69
NheI GCTAGC 1 cut(s) 745
NlaIII CATG 9 cut(s) 707, 980, 990, 1158, 1182, 1283, 1366, 1574, 1621
NlaIV GGNNCC 3 cut(s) 446, 1140, 1467
NmuCI GTSAC 1 cut(s) 1435
NsiI ATGCAT 1 cut(s) 203
NspV TTCGAA 1 cut(s) 1085
PagI TCATGA 2 cut(s) 703, 1279
PctI GAATGC 1 cut(s) 203
PdiI GCCGGC 1 cut(s) 71
PdmI GAANNNNTTC 4 cut(s) 31, 699, 864, 1530
PfeI GAWTC 5 cut(s) 626, 707, 815, 949, 1370
PflMI CCANNNNNTGG 1 cut(s) 827
PkrI GCNGC 6 cut(s) 48, 130, 1166, 1497, 1587, 1609
PleI GAGTC 3 cut(s) 758, 1019, 1514
PpsI GAGTC 3 cut(s) 758, 1019, 1514
PpuMI RGGWCCY 1 cut(s) 1139
Psp1406I AACGTT 1 cut(s) 397
Psp5II RGGWCCY 1 cut(s) 1139
Psp6I CCWGG 2 cut(s) 900, 1167
PspGI CCWGG 2 cut(s) 900, 1167
PspN4I GGNNCC 3 cut(s) 446, 1140, 1467
PspPI GGNCC 2 cut(s) 904, 1139
PspPPI RGGWCCY 1 cut(s) 1139
PstNI CAGNNNCTG 1 cut(s) 294
PsuI RGATCY 2 cut(s) 355, 653
PvuII CAGCTG 1 cut(s) 49
RsaI GTAC 3 cut(s) 845, 1301, 1467
RsaNI GTAC 3 cut(s) 844, 1300, 1466
RseI CAYNNNNRTG 1 cut(s) 1159
SaqAI TTAA 1 cut(s) 1672
SatI GCNGC 6 cut(s) 47, 129, 1165, 1496, 1586, 1608
Sau3AI GATC 9 cut(s) 51, 138, 355, 516, 653, 967, 1058, 1321, 1538
Sau96I GGNCC 2 cut(s) 904, 1139
SchI GAGTC 3 cut(s) 758, 1020, 1515
ScrFI CCNGG 4 cut(s) 441, 442, 902, 1169
SfaNI GCATC 2 cut(s) 552, 1132
SfuI TTCGAA 1 cut(s) 1085
SinI GGWCC 2 cut(s) 904, 1139
SmaI CCCGGG 1 cut(s) 442
SmiMI CAYNNNNRTG 1 cut(s) 1159
SmlI CTYRAG 2 cut(s) 74, 1625
SmoI CTYRAG 2 cut(s) 74, 1625
SpeI ACTAGT 1 cut(s) 1439
SsiI CCGC 4 cut(s) 128, 131, 1496, 1519
SspMI CTAG 6 cut(s) 345, 746, 930, 1116, 1254, 1440
StyD4I CCNGG 4 cut(s) 439, 440, 900, 1167
StyI CCWWGG 2 cut(s) 821, 1049
TaaI ACNGT 6 cut(s) 222, 296, 458, 477, 1435, 1553
TaiI ACGT 2 cut(s) 400, 1639
TaqI TCGA 3 cut(s) 678, 1085, 1209
TatI WGTACW 2 cut(s) 843, 1299
TauI GCSGC 2 cut(s) 131, 1498
TfiI GAWTC 5 cut(s) 626, 707, 815, 949, 1370
Tru1I TTAA 1 cut(s) 1672
Tru9I TTAA 1 cut(s) 1672
TscAI CASTG 5 cut(s) 71, 216, 627, 777, 1068
TseFI GTSAC 1 cut(s) 1435
TseI GCWGC 4 cut(s) 46, 1164, 1585, 1607
Tsp45I GTSAC 1 cut(s) 1435
TspMI CCCGGG 1 cut(s) 440
TspRI CASTG 5 cut(s) 71, 216, 627, 777, 1068
Van91I CCANNNNNTGG 1 cut(s) 827
VpaK11BI GGWCC 2 cut(s) 904, 1139
XagI CCTNNNNNAGG 1 cut(s) 169
XapI RAATTY 6 cut(s) 239, 666, 997, 1097, 1211, 1613
XmaI CCCGGG 1 cut(s) 440
XmnI GAANNNNTTC 4 cut(s) 31, 699, 864, 1530
XspI CTAG 6 cut(s) 345, 746, 930, 1116, 1254, 1440
Zsp2I ATGCAT 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.