Prupe.3G255200_v2.0.a1

Protein RIK isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
24381229 .. 24387767
6539 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G255200.1

Sequence Viewer

Length: 1785 bp
ATGACAGAAGATAGTGGCGCTAGGGTTCTCTCGGATGTGCCCAATGATGCCTCACAAACAAGGCAAAGGAAGAAAAGAAAGTGGGATCAACCTGCAGCATCTTTGGTTTCAGCTGGTTTAGCAGTGCCTGGGGCTTTCCCATTGGGAAATGCTGGATTGCTTGATGGGATTACAGTTCCTGGCGTAACTCCAGTGACTGGTGCTCATCTGATGAATCCACTTGAGGCTAGTCGTCCTACCATCCCTCAGTTGTATCAGGTACCTCTGATACCGCAACAGACTGCCACGGTCATCCAAAAATTAATTCAACCAAAAATCCAAGATGAGTTAATAGCACGAGAAATTGTTATCAACGATGCAGAGTCTCTTGTTCGTTATAAGCTGACAAAACGCCAAACACAGGAGGAGATCCAAAGATGCACTGGTGCTGTGGTGATAACAAGGGGCAAGTATCGTCCACCAAATGCATCAACTGATGGTGAAAAGCCATTATATCTTCATATTTCTGCAGGGGCTAATTTAAAAGAGACAGCAGAACGGATTTTAGCAGTTGACCGTGCTGCTGCCATGGTTGAAGAAATGCTGAAACAGGGTCAGAATCCGACTATGAGCAACGGATTGACGGCACCAAACACTTGTGTGTATTTGGGCTTTGACGCAGATCCGTCATGGAGCATTGCTGCTCGTATACGTGGGCCAAATGACCAGTATATAAATCACATTATGAATGAAACAGGAGCAACTGTGTCACTCAGAGGGCGTGGTTCAGGAAATCTTGAGAGTGTAAATGGCGAAGAAGGACAGCTACCATTGCATTTATTCTTGTCAAGTAATAATTCAAAAAGTCTTGAAGATGCTAAACTTCTGGCTGAAAATCTTTTGGATACAGTCAGTGTAGAGTGTGGTGTCTCCAGGGTTTCATCATCTAAGGTTTATAGTGCTGTTCCACCCCCACAGCAGGTATATAGTGCTGTTCCACCACCGCATCAGTTGTTGGCTGGAGTTCAGAGTTCGGGAAGCGAGGTAAAAACAATTACAAGTTTGTCGCCTCCAACTGTGGGTGCTACACCAGCTCCGGCAGTTTCCTCTGTTGGAACCCCTGTGGTCGCTACTGTCTTTTCTCAAGGGGCAATATCTCAACCTGGAGGGTTGTTAAACTCTCTGCAATCTCACACAAACATTGGTGGTTATCCCCAACCTGTACCTCTATTATCTAATGGAACAAGCTACAATGGATACGGTGGGATATATCCTCAAGTCACACCTTTGCAACAAGTTGCTCTTGCCCTTAGACAGTCATCCCCTATCTCTTCTACAGTTGCTCCCACAACATCAGCGCCAAGCACTGAACCAAAGTTGAATGTTAACTCCACTTCTGGTTCTGAGAAGGAGAAACGATCTCCACAGTCACAGAGGCGGAAGTTTCAGGAGTTACCAATTGGTACTGCAAAAGTCCATCAGGAACTGGAAATGTCAAAGCGAAATGAACTGTTGGCAGATTTGGGTGTGAGAAATGTATCAACTATGCCAGCTCCAAAGAAATTGGTCCAGCCAGCATCAAATGGAATGCCACCACCCCTACCTAGAACAATGCCGCCACCTCCACCAAAATTCACCTCATCAGCACACGTTCTGGCCAAAACAAAATCTGATGATGTCCCTGATACTTTGGTCAAGCTGATGGAATATGGTGAGGATGATGATGACTCTGAGGAAACTAACGAAGAATTACCCACTAGCAATTCTGGTGCAGTGACAGCTCGAAAGCCTTTCTGGGCGTTATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

595

Amino Acids

63.24

Weight (kDa)

6.74

Isoelectric Point (pI)

50.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 378
Acc36I ACCTGC 2 cut(s) 100, 949
Acc65I GGTACC 1 cut(s) 259
AccB1I GGYRCC 2 cut(s) 259, 625
AccB7I CCANNNNNTGG 1 cut(s) 197
AccI GTMKAC 1 cut(s) 688
AciI CCGC 4 cut(s) 272, 983, 1417, 1595
AclWI GGATC 3 cut(s) 93, 403, 656
AcoI YGGCCR 1 cut(s) 1635
AcsI RAATTY 1 cut(s) 1610
AfaI GTAC 3 cut(s) 261, 1203, 1444
AfiI CCNNNNNNNGG 4 cut(s) 197, 400, 958, 1058
AflIII ACRYGT 1 cut(s) 1627
AgsI TTSAA 5 cut(s) 308, 575, 840, 851, 1360
AjnI CCWGG 4 cut(s) 127, 178, 911, 1141
AjuI GAANNNNNNNTTGG 2 cut(s) 288, 320
AleI CACNNNNGTG 1 cut(s) 638
AluBI AGCT 8 cut(s) 113, 382, 805, 1073, 1227, 1532, 1678, 1760
AluI AGCT 8 cut(s) 113, 382, 805, 1073, 1227, 1532, 1678, 1760
Alw21I GWGCWC 1 cut(s) 205
Alw26I GTCTC 3 cut(s) 369, 521, 913
AlwI GGATC 3 cut(s) 93, 403, 656
AlwNI CAGNNNCTG 4 cut(s) 128, 179, 197, 1465
AoxI GGCC 2 cut(s) 695, 1635
ApeKI GCWGC 4 cut(s) 95, 560, 563, 680
ApoI RAATTY 1 cut(s) 1610
AseI ATTAAT 1 cut(s) 302
Asp718I GGTACC 1 cut(s) 259
AspLEI GCGC 2 cut(s) 20, 1339
AspS9I GGNCC 2 cut(s) 695, 1546
AsuHPI GGTGA 4 cut(s) 445, 491, 1606, 1703
AvaII GGWCC 1 cut(s) 1546
BaeGI GKGCMC 1 cut(s) 42
BaeI ACNNNNGTAYC 2 cut(s) 1656, 1689
BalI TGGCCA 1 cut(s) 1637
BanI GGYRCC 2 cut(s) 259, 625
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BauI CACGAG 1 cut(s) 336
Bbv12I GWGCWC 1 cut(s) 205
BbvI GCAGC 4 cut(s) 107, 547, 550, 667
BccI CCATC 5 cut(s) 158, 248, 470, 1464, 1675
BceAI ACGGC 1 cut(s) 639
BciT130I CCWGG 4 cut(s) 129, 180, 913, 1143
BciVI GTATCC 2 cut(s) 877, 1229
BcoDI GTCTC 3 cut(s) 369, 521, 913
BfaI CTAG 4 cut(s) 21, 228, 1584, 1737
BfmI CTRYAG 3 cut(s) 93, 507, 1314
BfoI RGCGCY 2 cut(s) 21, 1340
BfuAI ACCTGC 2 cut(s) 100, 949
BfuI GTATCC 2 cut(s) 877, 1229
BisI GCNGC 5 cut(s) 96, 561, 564, 681, 1595
BlsI GCNGC 5 cut(s) 97, 562, 565, 682, 1596
Bme1390I CCNGG 4 cut(s) 129, 180, 913, 1143
Bme18I GGWCC 1 cut(s) 1546
BmgT120I GGNCC 2 cut(s) 695, 1546
BmiI GGNNCC 3 cut(s) 261, 627, 1096
BmrFI CCNGG 4 cut(s) 129, 180, 913, 1143
BmsI GCATC 8 cut(s) 37, 107, 346, 407, 476, 844, 994, 1565
BpmI CTGGAG 4 cut(s) 174, 895, 1020, 1164
BpuEI CTTGAG 4 cut(s) 242, 797, 1107, 1239
BsaAI YACGTR 1 cut(s) 692
BsaJI CCNNGG 4 cut(s) 128, 285, 567, 912
BsaXI ACNNNNNCTCC 6 cut(s) 729, 759, 1057, 1087, 1306, 1336
Bsc4I CCNNNNNNNGG 4 cut(s) 197, 400, 958, 1058
Bse1I ACTGG 5 cut(s) 191, 202, 427, 706, 1470
Bse3DI GCAATG 2 cut(s) 675, 809
BseBI CCWGG 4 cut(s) 129, 180, 913, 1143
BseDI CCNNGG 4 cut(s) 128, 285, 567, 912
BseGI GGATG 5 cut(s) 40, 240, 291, 1298, 1702
BseLI CCNNNNNNNGG 4 cut(s) 197, 400, 958, 1058
BseMI GCAATG 2 cut(s) 675, 809
BseMII CTCAG 4 cut(s) 260, 766, 1374, 1701
BseNI ACTGG 5 cut(s) 191, 202, 427, 706, 1470
BseRI GAGGAG 1 cut(s) 419
BseSI GKGCMC 1 cut(s) 42
BseXI GCAGC 4 cut(s) 107, 547, 550, 667
BsgI GTGCAG 1 cut(s) 1770
BshFI GGCC 2 cut(s) 697, 1637
BshNI GGYRCC 2 cut(s) 259, 625
BsiHKAI GWGCWC 1 cut(s) 205
BsiSI CCGG 1 cut(s) 1076
BslFI GGGAC 1 cut(s) 1643
BslI CCNNNNNNNGG 4 cut(s) 197, 400, 958, 1058
BsmAI GTCTC 3 cut(s) 369, 521, 913
BsmFI GGGAC 1 cut(s) 1643
BsmI GAATGC 1 cut(s) 1572
BsnI GGCC 2 cut(s) 697, 1637
Bsp1286I GDGCHC 2 cut(s) 42, 205
Bsp143I GATC 4 cut(s) 85, 408, 661, 1397
Bsp19I CCATGG 1 cut(s) 567
BspACI CCGC 4 cut(s) 272, 983, 1417, 1595
BspANI GGCC 2 cut(s) 697, 1637
BspCNI CTCAG 4 cut(s) 259, 765, 1375, 1702
BspLI GGNNCC 3 cut(s) 261, 627, 1096
BspMAI CTGCAG 2 cut(s) 97, 511
BspMI ACCTGC 2 cut(s) 100, 949
BspPI GGATC 3 cut(s) 93, 403, 656
BspT107I GGYRCC 2 cut(s) 259, 625
BsrDI GCAATG 2 cut(s) 675, 809
BsrI ACTGG 5 cut(s) 191, 202, 427, 706, 1470
BssECI CCNNGG 4 cut(s) 128, 285, 567, 912
BssMI GATC 4 cut(s) 85, 408, 661, 1397
BssNAI GTATAC 1 cut(s) 689
BssSI CACGAG 1 cut(s) 336
BssT1I CCWWGG 1 cut(s) 567
Bst1107I GTATAC 1 cut(s) 689
Bst2BI CACGAG 1 cut(s) 336
Bst2UI CCWGG 4 cut(s) 129, 180, 913, 1143
Bst6I CTCTTC 1 cut(s) 1315
BstBAI YACGTR 1 cut(s) 692
BstC8I GCNNGC 2 cut(s) 1530, 1554
BstDEI CTNAG 6 cut(s) 246, 752, 927, 1289, 1383, 1710
BstDSI CCRYGG 2 cut(s) 285, 567
BstF5I GGATG 5 cut(s) 40, 240, 291, 1298, 1702
BstH2I RGCGCY 2 cut(s) 21, 1340
BstHHI GCGC 2 cut(s) 20, 1339
BstKTI GATC 4 cut(s) 88, 411, 664, 1400
BstMAI GTCTC 3 cut(s) 369, 521, 913
BstMBI GATC 4 cut(s) 85, 408, 661, 1397
BstMWI GCNNNNNNNGC 4 cut(s) 119, 811, 1070, 1757
BstNI CCWGG 4 cut(s) 129, 180, 913, 1143
BstSCI CCNGG 4 cut(s) 127, 178, 911, 1141
BstSFI CTRYAG 3 cut(s) 93, 507, 1314
BstSLI GKGCMC 1 cut(s) 42
BstV1I GCAGC 4 cut(s) 107, 547, 550, 667
BstX2I RGATCY 2 cut(s) 408, 661
BstYI RGATCY 2 cut(s) 408, 661
BstZ17I GTATAC 1 cut(s) 689
BsuI GTATCC 2 cut(s) 877, 1229
BsuRI GGCC 2 cut(s) 697, 1637
BtgI CCRYGG 2 cut(s) 285, 567
BtsCI GGATG 5 cut(s) 40, 240, 291, 1298, 1702
BtsI GCAGTG 2 cut(s) 129, 1758
BtsIMutI CAGTG 6 cut(s) 129, 198, 420, 898, 1344, 1758
BveI ACCTGC 2 cut(s) 100, 949
Cac8I GCNNGC 2 cut(s) 1530, 1554
CaiI CAGNNNCTG 4 cut(s) 128, 179, 197, 1465
CfoI GCGC 2 cut(s) 20, 1339
Cfr13I GGNCC 2 cut(s) 695, 1546
CseI GACGC 1 cut(s) 665
Csp6I GTAC 3 cut(s) 260, 1202, 1443
CviAII CATG 2 cut(s) 568, 669
CviQI GTAC 3 cut(s) 260, 1202, 1443
DdeI CTNAG 6 cut(s) 246, 752, 927, 1289, 1383, 1710
DpnI GATC 4 cut(s) 87, 410, 663, 1399
DpnII GATC 4 cut(s) 85, 408, 661, 1397
DraI TTTAAA 1 cut(s) 522
EaeI YGGCCR 1 cut(s) 1635
Eam1104I CTCTTC 1 cut(s) 1315
EarI CTCTTC 1 cut(s) 1315
EciI GGCGGA 1 cut(s) 1432
Eco130I CCWWGG 1 cut(s) 567
Eco47I GGWCC 1 cut(s) 1546
EcoRII CCWGG 4 cut(s) 127, 178, 911, 1141
EcoT14I CCWWGG 1 cut(s) 567
EcoT22I ATGCAT 1 cut(s) 469
ErhI CCWWGG 1 cut(s) 567
FaeI CATG 2 cut(s) 571, 672
FalI AAGNNNNNCTT 2 cut(s) 1266, 1298
FaqI GGGAC 1 cut(s) 1643
FatI CATG 2 cut(s) 567, 668
FblI GTMKAC 1 cut(s) 688
Fnu4HI GCNGC 5 cut(s) 96, 561, 564, 681, 1595
FokI GGATG 5 cut(s) 47, 227, 278, 1285, 1709
Fsp4HI GCNGC 5 cut(s) 96, 561, 564, 681, 1595
FspBI CTAG 4 cut(s) 21, 228, 1584, 1737
GlaI GCGC 2 cut(s) 19, 1338
GluI GCNGC 5 cut(s) 96, 561, 564, 681, 1595
GsuI CTGGAG 4 cut(s) 174, 895, 1020, 1164
HaeII RGCGCY 2 cut(s) 21, 1340
HaeIII GGCC 2 cut(s) 697, 1637
HapII CCGG 1 cut(s) 1076
HgaI GACGC 1 cut(s) 665
HhaI GCGC 2 cut(s) 20, 1339
Hin1II CATG 2 cut(s) 571, 672
Hin6I GCGC 2 cut(s) 18, 1337
HinP1I GCGC 2 cut(s) 18, 1337
HincII GTYRAC 2 cut(s) 553, 1366
HindII GTYRAC 2 cut(s) 553, 1366
HinfI GANTC 4 cut(s) 214, 362, 598, 1706
HpaI GTTAAC 1 cut(s) 1366
HpaII CCGG 1 cut(s) 1076
HphI GGTGA 4 cut(s) 445, 491, 1606, 1703
Hpy166II GTNNAC 4 cut(s) 458, 553, 689, 1366
Hpy188III TCNNGA 6 cut(s) 768, 776, 848, 1014, 1427, 1460
Hpy8I GTNNAC 4 cut(s) 458, 553, 689, 1366
HpyAV CCTTC 2 cut(s) 791, 1381
HpyCH4IV ACGT 2 cut(s) 691, 1629
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 811, 1070, 1757
HpyF3I CTNAG 6 cut(s) 246, 752, 927, 1289, 1383, 1710
HpySE526I ACGT 2 cut(s) 691, 1629
Hsp92II CATG 2 cut(s) 571, 672
HspAI GCGC 2 cut(s) 18, 1337
KpnI GGTACC 1 cut(s) 263
KspAI GTTAAC 1 cut(s) 1366
Kzo9I GATC 4 cut(s) 85, 408, 661, 1397
LmnI GCTCC 5 cut(s) 672, 737, 1078, 1327, 1537
Lsp1109I GCAGC 4 cut(s) 107, 547, 550, 667
LweI GCATC 8 cut(s) 37, 107, 346, 407, 476, 844, 994, 1565
MaeI CTAG 4 cut(s) 21, 228, 1584, 1737
MaeII ACGT 2 cut(s) 691, 1629
MaeIII GTNAC 7 cut(s) 184, 193, 747, 1258, 1407, 1431, 1753
MalI GATC 4 cut(s) 87, 410, 663, 1399
MboI GATC 4 cut(s) 85, 408, 661, 1397
MboII GAAGA 8 cut(s) 20, 82, 488, 587, 806, 863, 1302, 1736
MfeI CAATTG 1 cut(s) 1437
MflI RGATCY 2 cut(s) 408, 661
MhlI GDGCHC 2 cut(s) 42, 205
MlsI TGGCCA 1 cut(s) 1637
MluNI TGGCCA 1 cut(s) 1637
MlyI GAGTC 2 cut(s) 371, 1700
MmeI TCCRAC 3 cut(s) 626, 1072, 1076
Mox20I TGGCCA 1 cut(s) 1637
Mph1103I ATGCAT 1 cut(s) 469
MscI TGGCCA 1 cut(s) 1637
MseI TTAA 5 cut(s) 302, 329, 521, 1154, 1365
MslI CAYNNNNRTG 1 cut(s) 638
Msp20I TGGCCA 1 cut(s) 1637
MspA1I CMGCKG 1 cut(s) 113
MspI CCGG 1 cut(s) 1076
MspR9I CCNGG 4 cut(s) 129, 180, 913, 1143
MunI CAATTG 1 cut(s) 1437
Mva1269I GAATGC 1 cut(s) 1572
MvaI CCWGG 4 cut(s) 129, 180, 913, 1143
MwoI GCNNNNNNNGC 4 cut(s) 119, 811, 1070, 1757
NcoI CCATGG 1 cut(s) 567
NdeII GATC 4 cut(s) 85, 408, 661, 1397
NlaIII CATG 2 cut(s) 571, 672
NlaIV GGNNCC 3 cut(s) 261, 627, 1096
NmuCI GTSAC 5 cut(s) 193, 747, 1258, 1407, 1753
NsiI ATGCAT 1 cut(s) 469
OliI CACNNNNGTG 1 cut(s) 638
PctI GAATGC 1 cut(s) 1572
PfeI GAWTC 2 cut(s) 214, 598
PflMI CCANNNNNTGG 1 cut(s) 197
PkrI GCNGC 5 cut(s) 97, 562, 565, 682, 1596
PleI GAGTC 2 cut(s) 370, 1700
PpsI GAGTC 2 cut(s) 370, 1700
Ppu21I YACGTR 1 cut(s) 692
PshBI ATTAAT 1 cut(s) 302
PsiI TTATAA 1 cut(s) 378
Psp6I CCWGG 4 cut(s) 127, 178, 911, 1141
PspGI CCWGG 4 cut(s) 127, 178, 911, 1141
PspN4I GGNNCC 3 cut(s) 261, 627, 1096
PspPI GGNCC 2 cut(s) 695, 1546
PstI CTGCAG 2 cut(s) 97, 511
PstNI CAGNNNCTG 4 cut(s) 128, 179, 197, 1465
PsuI RGATCY 2 cut(s) 408, 661
PvuII CAGCTG 1 cut(s) 113
RsaI GTAC 3 cut(s) 261, 1203, 1444
RsaNI GTAC 3 cut(s) 260, 1202, 1443
RseI CAYNNNNRTG 1 cut(s) 638
SaqAI TTAA 5 cut(s) 302, 329, 521, 1154, 1365
SatI GCNGC 5 cut(s) 96, 561, 564, 681, 1595
Sau3AI GATC 4 cut(s) 85, 408, 661, 1397
Sau96I GGNCC 2 cut(s) 695, 1546
SchI GAGTC 2 cut(s) 371, 1700
ScrFI CCNGG 4 cut(s) 129, 180, 913, 1143
SduI GDGCHC 2 cut(s) 42, 205
SfaNI GCATC 8 cut(s) 37, 107, 346, 407, 476, 844, 994, 1565
SfcI CTRYAG 3 cut(s) 93, 507, 1314
SinI GGWCC 1 cut(s) 1546
SmiMI CAYNNNNRTG 1 cut(s) 638
SmlI CTYRAG 4 cut(s) 221, 776, 1122, 1254
SmoI CTYRAG 4 cut(s) 221, 776, 1122, 1254
SsiI CCGC 4 cut(s) 272, 983, 1417, 1595
SspMI CTAG 4 cut(s) 21, 228, 1584, 1737
StyD4I CCNGG 4 cut(s) 127, 178, 911, 1141
StyI CCWWGG 1 cut(s) 567
TaiI ACGT 2 cut(s) 694, 1632
TaqI TCGA 1 cut(s) 1762
TauI GCSGC 1 cut(s) 1597
TfiI GAWTC 2 cut(s) 214, 598
Tru1I TTAA 5 cut(s) 302, 329, 521, 1154, 1365
Tru9I TTAA 5 cut(s) 302, 329, 521, 1154, 1365
TscAI CASTG 6 cut(s) 129, 198, 427, 898, 1351, 1758
TseFI GTSAC 5 cut(s) 193, 747, 1258, 1407, 1753
TseI GCWGC 4 cut(s) 95, 560, 563, 680
Tsp45I GTSAC 5 cut(s) 193, 747, 1258, 1407, 1753
TspDTI ATGAA 6 cut(s) 227, 488, 740, 744, 909, 1500
TspGWI ACGGA 3 cut(s) 553, 630, 654
TspRI CASTG 6 cut(s) 129, 198, 427, 898, 1351, 1758
Van91I CCANNNNNTGG 1 cut(s) 197
VpaK11BI GGWCC 1 cut(s) 1546
VspI ATTAAT 1 cut(s) 302
XapI RAATTY 1 cut(s) 1610
XcmI CCANNNNNNNNNTGG 1 cut(s) 419
XmiI GTMKAC 1 cut(s) 688
XspI CTAG 4 cut(s) 21, 228, 1584, 1737
Zsp2I ATGCAT 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.