Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0005118

Physical Location & Seq

Genomic Coordinates Reverse (-)

81743986 .. 81749566

Gene Structure 5581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG584500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGTTGGAATTTAACATAAAGTTTTGTGAAGGACAAAATAGAAATTGTATAGAAAAGTTGAATTTGGCCCGTGAAAGCGTAAAAAGAAAAAATAAAAAAGAAAGTAAACTTGAAAACCAAAAGAACTCTCTTCTGTCTTCATCGGAAAATCTCTCTGGAAGGAACAGTAAACCACGGGCAATGACGGAGGAGAGCGGCGCTAGGGTTTCCAATGATGCATCGCAAACAAGGCAAAGAAAGAAAAGAAAGTGGGATCAACCGGCGGAGTCATTGGTTATAGCTGGTTTAGCGGTGCCTGGGGCGCTCCCATTAGGCAATGTGGGATTGCTTGGTGGGATAACGCTTCCCGGTGTAAGTCCAGTGTCCGGTGCGATCAATCCACTTGCTGCTGGCTTTCCTACTGTACCACAGGCGTATCAGGTGCCTCTGATACCGCAGCAAGCTGCAACAGTTATCCAGAAACTAATACAACCAAAGATCCAAGATGAGTTAATAGCACGAGAAATTGTTATTAATGATGCAGAGTCTTCTATTCGGTACAAGCTGACAAAACGCCAAACACAGGAGGAGATCCAAAGGTGCACTGGTGCTGTGGTGATAACAAGGGGCAAGTATCATCCACCAAATGCGTCAACTGATGGTGAAAAGCCATTATATCTTCATATTTCTGCAGGGGCTAATATAAAAGAGACGACAGAACGGATTTTAGCAGTTGATCGTGCTGCTGCCATGGTTGAAGAAATGTTGAAACAGGGTCAAAATTTACATCCCTTGTCATTGTCGTCTCTTTCTACCGTGAGTAATGGACTGAAGGAACCAAGCACATGTGTATATCTGGGCTTTGATGCAGATCCATCATTGAACATTGCTGCCCGTATACGTGGACCAAGTGACCAGTATATAAATCACATTATGAATGAAACAGGAGCAACTGTCTTACTCAGAGGGCGTGGTTCAGGAAATATTGATTGTTTACATGGTGAAGAAGGACAACAACCATTGCATCTGTTCTTGTCAAGTAATAATTTGAAAAGTCTCGAAGATGCTAGGCTTTTGGCTGAACATCTTTTGGATACAATCAGCGTAGAGTGTGGTGTCTCCAGGGTTTCTTCATCTAAGGTTTATAGTGCTATTGCACCCCCACAGCAGGTATATAGTGCTGTTCCTCCACCACATCAGTTGTCAGCTGGAGTTCAGAGTTCTGGAAATGAGGTAAAAGCCATTACAACTGTGGCGTCTGCAACTGTCGGTCTTACACCAGCTCCCCCGGTTTCCTCAGTTGGGACTCCTGTGACCACTACCATTTTTACTCAAGGGACAGTATCTCAGTCTGGAGGATTTTCAAACGGTGTGCAATCTCAGGCAAGCAGTGGTGGTTGTCCACAACTTCCATCTGGTGGAACAATCTACAGTGGATATGGTGGGATATATCCTCAAGTCACACCTTTACAACAAGTTGCCCTGGCCCTTAGACAGTCAACATCCCCTATCACTTCTACAATTGCTCCCACAACATCAGTCCCAAGCACTGAACCAAAGTTGAATACGAAATTCAGTTCTGATTCTGAGAAGGAAAAACGGCCTCCACAAAGACGGAAGTTTCAGGAGTTACCAGTTAGTTCGAAGGGTCCTGCCAAAGTTCATCAGGAATTGGACTTATTAAAGCCACCTGAACTGGCATCAGATTTGGGTGTGAGAAATGTATCAACTATGCCAGCTCCAAAGAAGTTGGTCCAGCAGGTTTCAAATGGAATGCCGCCACCGCCACCCAGAACCATGCCTCCACCTCCACCAAAATTTACATCATCAACACAGGTTGTTAAAGAGATTGACAAGAACAATGTTCTGAAAAAGACAAAATCTGATAATGTACCTGATACTTTGGTCAAGCTCATGGAATACGGAGAAGATGATGATGACTCTGAGGAAACTGATGAACAGTCACCGAATAGCAACCCTGTTGCAGTAACAGCTCGAAAGCCTTTCTGGGCTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

665

Amino Acids

71.3

Weight (kDa)

8.89

Isoelectric Point (pI)

51.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_12	PF23469	165 - 253	2.7e-35	KH-domain
KH-I_KHDC4-BBP	PF22675	283 - 358	1e-25	KHDC4/BBP-like, KH-domain type I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29390 AT3G29390
fragaria_vesca	FvH4_6g46910 FvH4_6g46910 FvH4_6g46910 FvH4_6g46910
malus_domestica	MD09G1066300.v1.1 MD09G1066400.v1.1
prunus_persica	Prupe.3G255200_v2.0.a1 Prupe.3G255200_v2.0.a1
pyrus_communis	pycom111g05570
rosa_chinensis	RchiOBHm_Chr2g0165881
rosa_laevigata	RLG00000021564
rosa_multiflora	Rmu_co8354311.1_g000001 Rmu_sc0001982.1_g000006 Rmu_sc0006218.1_g000001 Rmu_sc0006218.1_g000002 Rmu_sc0008709.1_g000009 Rmu_sc0013817.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085390
rosa_rugosa	Rorug02G0518600 Rorug02G0518700 Rorug02G0518800 Rorug05G0064400 Rorug05G0462700
rosa_samantha	Rh2AG584500 Rh2BG596300 Rh2CG567200 Rh2DG606100
rosa_wichuraiana	Rw2G048730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1138, 1729
AccB1I	GGYRCC	2 cut(s)	292, 421
AccB7I	CCANNNNNTGG	1 cut(s)	1397
AccBSI	CCGCTC	1 cut(s)	195
AccI	GTMKAC	1 cut(s)	877
AciI	CCGC	6 cut(s)	195, 263, 290, 434, 1757, 1763
AclWI	GGATC	4 cut(s)	261, 472, 565, 845
AcsI	RAATTY	5 cut(s)	8, 61, 760, 1550, 1796
AcuI	CTGAAG	1 cut(s)	830
AcyI	GRCGYC	1 cut(s)	1235
AfaI	GTAC	3 cut(s)	405, 539, 1872
AfiI	CCNNNNNNNGG	5 cut(s)	365, 562, 1147, 1281, 1397
AflIII	ACRYGT	1 cut(s)	824
AgsI	TTSAA	9 cut(s)	61, 113, 737, 748, 862, 1030, 1344, 1543, 1746
AjnI	CCWGG	3 cut(s)	295, 1100, 1461
AloI	GAACNNNNNNTCC	2 cut(s)	1765, 1797
AluBI	AGCT	8 cut(s)	281, 443, 544, 1187, 1262, 1718, 1891, 1973
AluI	AGCT	8 cut(s)	281, 443, 544, 1187, 1262, 1718, 1891, 1973
Alw21I	GWGCWC	1 cut(s)	584
Alw26I	GTCTC	4 cut(s)	683, 789, 1040, 1102
Alw44I	GTGCAC	1 cut(s)	580
AlwI	GGATC	4 cut(s)	261, 472, 565, 845
AoxI	GGCC	3 cut(s)	66, 1464, 1580
ApaLI	GTGCAC	1 cut(s)	580
ApeKI	GCWGC	6 cut(s)	386, 436, 443, 722, 725, 869
ApoI	RAATTY	5 cut(s)	8, 61, 760, 1550, 1796
AseI	ATTAAT	1 cut(s)	513
AspLEI	GCGC	2 cut(s)	200, 304
AspS9I	GGNCC	5 cut(s)	67, 884, 1465, 1628, 1732
AsuC2I	CCSGG	2 cut(s)	348, 1268
AsuHPI	GGTGA	4 cut(s)	607, 653, 992, 1935
AsuII	TTCGAA	1 cut(s)	1622
AvaII	GGWCC	3 cut(s)	884, 1628, 1732
BaeGI	GKGCMC	1 cut(s)	584
BaeI	ACNNNNGTAYC	4 cut(s)	398, 431, 1869, 1902
BanI	GGYRCC	2 cut(s)	292, 421
BauI	CACGAG	1 cut(s)	498
BbsI	GAAGAC	2 cut(s)	129, 519
Bbv12I	GWGCWC	1 cut(s)	584
BbvI	GCAGC	6 cut(s)	373, 430, 448, 709, 712, 856
BccI	CCATC	3 cut(s)	632, 862, 1399
BceAI	ACGGC	1 cut(s)	1595
BciT130I	CCWGG	3 cut(s)	297, 1102, 1463
BciVI	GTATCC	1 cut(s)	1066
BcnI	CCSGG	2 cut(s)	348, 1268
BcoDI	GTCTC	4 cut(s)	683, 789, 1040, 1102
BfaI	CTAG	2 cut(s)	201, 1047
BfmI	CTRYAG	2 cut(s)	669, 1408
BfoI	RGCGCY	2 cut(s)	201, 305
BfuAI	ACCTGC	2 cut(s)	1138, 1729
BfuI	GTATCC	1 cut(s)	1066
BisI	GCNGC	8 cut(s)	196, 387, 437, 444, 723, 726, 870, 1757
BlsI	GCNGC	8 cut(s)	197, 388, 438, 445, 724, 727, 871, 1758
Bme1390I	CCNGG	5 cut(s)	297, 348, 1102, 1268, 1463
Bme18I	GGWCC	3 cut(s)	884, 1628, 1732
BmgT120I	GGNCC	5 cut(s)	67, 884, 1465, 1628, 1732
BmiI	GGNNCC	4 cut(s)	294, 423, 816, 1629
BmrFI	CCNGG	5 cut(s)	297, 348, 1102, 1268, 1463
BmsI	GCATC	7 cut(s)	205, 227, 508, 835, 1012, 1033, 1688
BpiI	GAAGAC	2 cut(s)	129, 519
BpmI	CTGGAG	3 cut(s)	1084, 1209, 1353
Bpu14I	TTCGAA	1 cut(s)	1622
BpuEI	CTTGAG	2 cut(s)	1296, 1419
BpuMI	CCSGG	2 cut(s)	348, 1268
BsaAI	YACGTR	1 cut(s)	881
BsaBI	GATNNNNATC	1 cut(s)	849
BsaHI	GRCGYC	1 cut(s)	1235
BsaJI	CCNNGG	6 cut(s)	173, 296, 729, 1101, 1266, 1461
BsaWI	WCCGGW	1 cut(s)	365
BsaXI	ACNNNNNCTCC	8 cut(s)	918, 948, 1246, 1276, 1489, 1519, 1765, 1795
Bsc4I	CCNNNNNNNGG	5 cut(s)	365, 562, 1147, 1281, 1397
Bse118I	RCCGGY	1 cut(s)	259
Bse1I	ACTGG	5 cut(s)	359, 589, 895, 1613, 1680
Bse3DI	GCAATG	4 cut(s)	186, 322, 864, 998
Bse8I	GATNNNNATC	1 cut(s)	849
BseBI	CCWGG	3 cut(s)	297, 1102, 1463
BseDI	CCNNGG	6 cut(s)	173, 296, 729, 1101, 1266, 1461
BseGI	GGATG	3 cut(s)	616, 766, 1481
BseJI	GATNNNNATC	1 cut(s)	849
BseLI	CCNNNNNNNGG	5 cut(s)	365, 562, 1147, 1281, 1397
BseMI	GCAATG	4 cut(s)	186, 322, 864, 998
BseMII	CTCAG	6 cut(s)	955, 1290, 1340, 1373, 1557, 1914
BseNI	ACTGG	5 cut(s)	359, 589, 895, 1613, 1680
BseRI	GAGGAG	2 cut(s)	203, 581
BseSI	GKGCMC	1 cut(s)	584
BseXI	GCAGC	6 cut(s)	373, 430, 448, 709, 712, 856
BshFI	GGCC	3 cut(s)	68, 1466, 1582
BshNI	GGYRCC	2 cut(s)	292, 421
BsiHKAI	GWGCWC	1 cut(s)	584
BsiSI	CCGG	4 cut(s)	260, 348, 366, 1268
BslFI	GGGAC	3 cut(s)	1297, 1330, 1505
BslI	CCNNNNNNNGG	5 cut(s)	365, 562, 1147, 1281, 1397
BsmAI	GTCTC	4 cut(s)	683, 789, 1040, 1102
BsmBI	CGTCTC	2 cut(s)	683, 789
BsmFI	GGGAC	3 cut(s)	1297, 1330, 1505
BsmI	GAATGC	1 cut(s)	1758
BsnI	GGCC	3 cut(s)	68, 1466, 1582
Bsp119I	TTCGAA	1 cut(s)	1622
Bsp1286I	GDGCHC	1 cut(s)	584
Bsp143I	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
Bsp19I	CCATGG	1 cut(s)	729
BspACI	CCGC	6 cut(s)	195, 263, 290, 434, 1757, 1763
BspANI	GGCC	3 cut(s)	68, 1466, 1582
BspCNI	CTCAG	6 cut(s)	954, 1289, 1339, 1372, 1558, 1915
BspLI	GGNNCC	4 cut(s)	294, 423, 816, 1629
BspMAI	CTGCAG	1 cut(s)	673
BspMI	ACCTGC	2 cut(s)	1138, 1729
BspPI	GGATC	4 cut(s)	261, 472, 565, 845
BspT104I	TTCGAA	1 cut(s)	1622
BspT107I	GGYRCC	2 cut(s)	292, 421
BsrBI	CCGCTC	1 cut(s)	195
BsrDI	GCAATG	4 cut(s)	186, 322, 864, 998
BsrFI	RCCGGY	1 cut(s)	259
BsrI	ACTGG	5 cut(s)	359, 589, 895, 1613, 1680
BssAI	RCCGGY	1 cut(s)	259
BssECI	CCNNGG	6 cut(s)	173, 296, 729, 1101, 1266, 1461
BssMI	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
BssNAI	GTATAC	1 cut(s)	878
BssNI	GRCGYC	1 cut(s)	1235
BssSI	CACGAG	1 cut(s)	498
BssT1I	CCWWGG	1 cut(s)	729
Bst1107I	GTATAC	1 cut(s)	878
Bst2BI	CACGAG	1 cut(s)	498
Bst2UI	CCWGG	3 cut(s)	297, 1102, 1463
Bst6I	CTCTTC	1 cut(s)	135
BstACI	GRCGYC	1 cut(s)	1235
BstBAI	YACGTR	1 cut(s)	881
BstBI	TTCGAA	1 cut(s)	1622
BstC8I	GCNNGC	4 cut(s)	391, 441, 1366, 1716
BstDEI	CTNAG	8 cut(s)	941, 1116, 1276, 1326, 1359, 1469, 1566, 1923
BstDSI	CCRYGG	2 cut(s)	173, 729
BstF5I	GGATG	3 cut(s)	616, 766, 1481
BstH2I	RGCGCY	2 cut(s)	201, 305
BstHHI	GCGC	2 cut(s)	200, 304
BstKTI	GATC	6 cut(s)	256, 375, 480, 573, 718, 853
BstMAI	GTCTC	4 cut(s)	683, 789, 1040, 1102
BstMBI	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
BstMWI	GCNNNNNNNGC	5 cut(s)	229, 287, 301, 1762, 1970
BstNI	CCWGG	3 cut(s)	297, 1102, 1463
BstNSI	RCATGY	1 cut(s)	828
BstSCI	CCNGG	5 cut(s)	295, 346, 1100, 1266, 1461
BstSFI	CTRYAG	2 cut(s)	669, 1408
BstSLI	GKGCMC	1 cut(s)	584
BstV1I	GCAGC	6 cut(s)	373, 430, 448, 709, 712, 856
BstV2I	GAAGAC	2 cut(s)	129, 519
BstX2I	RGATCY	3 cut(s)	477, 570, 850
BstYI	RGATCY	3 cut(s)	477, 570, 850
BstZ17I	GTATAC	1 cut(s)	878
BsuI	GTATCC	1 cut(s)	1066
BsuRI	GGCC	3 cut(s)	68, 1466, 1582
BtgI	CCRYGG	2 cut(s)	173, 729
BtgZI	GCGATG	1 cut(s)	204
BtsCI	GGATG	3 cut(s)	616, 766, 1481
BtsI	GCAGTG	1 cut(s)	1375
BtsIMutI	CAGTG	5 cut(s)	366, 582, 1375, 1417, 1527
BveI	ACCTGC	2 cut(s)	1138, 1729
Cac8I	GCNNGC	4 cut(s)	391, 441, 1366, 1716
CfoI	GCGC	2 cut(s)	200, 304
Cfr10I	RCCGGY	1 cut(s)	259
Cfr13I	GGNCC	5 cut(s)	67, 884, 1465, 1628, 1732
CseI	GACGC	2 cut(s)	618, 1224
Csp6I	GTAC	3 cut(s)	404, 538, 1871
CspCI	CAANNNNNGTGG	2 cut(s)	1161, 1196
CviAII	CATG	5 cut(s)	730, 825, 977, 1777, 1894
CviQI	GTAC	3 cut(s)	404, 538, 1871
DdeI	CTNAG	8 cut(s)	941, 1116, 1276, 1326, 1359, 1469, 1566, 1923
DpnI	GATC	6 cut(s)	255, 374, 479, 572, 717, 852
DpnII	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
Eam1104I	CTCTTC	1 cut(s)	135
EarI	CTCTTC	1 cut(s)	135
EciI	GGCGGA	1 cut(s)	278
Eco130I	CCWWGG	1 cut(s)	729
Eco47I	GGWCC	3 cut(s)	884, 1628, 1732
Eco57I	CTGAAG	1 cut(s)	830
EcoO109I	RGGNCCY	1 cut(s)	1628
EcoRII	CCWGG	3 cut(s)	295, 1100, 1461
EcoT14I	CCWWGG	1 cut(s)	729
EcoT22I	ATGCAT	1 cut(s)	220
ErhI	CCWWGG	1 cut(s)	729
Esp3I	CGTCTC	2 cut(s)	683, 789
FaeI	CATG	5 cut(s)	733, 828, 980, 1780, 1897
FaqI	GGGAC	3 cut(s)	1297, 1330, 1505
FatI	CATG	5 cut(s)	729, 824, 976, 1776, 1893
FblI	GTMKAC	1 cut(s)	877
Fnu4HI	GCNGC	8 cut(s)	196, 387, 437, 444, 723, 726, 870, 1757
FokI	GGATG	3 cut(s)	603, 753, 1468
Fsp4HI	GCNGC	8 cut(s)	196, 387, 437, 444, 723, 726, 870, 1757
FspBI	CTAG	2 cut(s)	201, 1047
GlaI	GCGC	2 cut(s)	199, 303
GluI	GCNGC	8 cut(s)	196, 387, 437, 444, 723, 726, 870, 1757
GsuI	CTGGAG	3 cut(s)	1084, 1209, 1353
HaeII	RGCGCY	2 cut(s)	201, 305
HaeIII	GGCC	3 cut(s)	68, 1466, 1582
HapII	CCGG	4 cut(s)	260, 348, 366, 1268
HgaI	GACGC	2 cut(s)	618, 1224
HhaI	GCGC	2 cut(s)	200, 304
Hin1I	GRCGYC	1 cut(s)	1235
Hin1II	CATG	5 cut(s)	733, 828, 980, 1780, 1897
Hin6I	GCGC	2 cut(s)	198, 302
HinP1I	GCGC	2 cut(s)	198, 302
HincII	GTYRAC	2 cut(s)	633, 1479
HindII	GTYRAC	2 cut(s)	633, 1479
HinfI	GANTC	5 cut(s)	266, 524, 1285, 1562, 1919
HpaII	CCGG	4 cut(s)	260, 348, 366, 1268
HphI	GGTGA	4 cut(s)	607, 653, 992, 1935
Hpy166II	GTNNAC	9 cut(s)	107, 170, 582, 633, 878, 884, 974, 1382, 1479
Hpy188III	TCNNGA	8 cut(s)	156, 457, 957, 1037, 1203, 1332, 1604, 1646
Hpy8I	GTNNAC	9 cut(s)	107, 170, 582, 633, 878, 884, 974, 1382, 1479
HpyAV	CCTTC	6 cut(s)	23, 153, 805, 980, 1564, 1618
HpyCH4IV	ACGT	1 cut(s)	880
HpyF10VI	GCNNNNNNNGC	5 cut(s)	229, 287, 301, 1762, 1970
HpyF3I	CTNAG	8 cut(s)	941, 1116, 1276, 1326, 1359, 1469, 1566, 1923
HpySE526I	ACGT	1 cut(s)	880
Hsp92I	GRCGYC	1 cut(s)	1235
Hsp92II	CATG	5 cut(s)	733, 828, 980, 1780, 1897
HspAI	GCGC	2 cut(s)	198, 302
Kzo9I	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
LmnI	GCTCC	5 cut(s)	309, 926, 1267, 1510, 1723
Lsp1109I	GCAGC	6 cut(s)	373, 430, 448, 709, 712, 856
LweI	GCATC	7 cut(s)	205, 227, 508, 835, 1012, 1033, 1688
MaeI	CTAG	2 cut(s)	201, 1047
MaeII	ACGT	1 cut(s)	880
MaeIII	GTNAC	6 cut(s)	890, 1291, 1438, 1608, 1941, 1966
MalI	GATC	6 cut(s)	255, 374, 479, 572, 717, 852
MbiI	CCGCTC	1 cut(s)	195
MboI	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
MboII	GAAGA	9 cut(s)	122, 129, 519, 650, 749, 995, 1052, 1101, 1919
MfeI	CAATTG	1 cut(s)	1500
MflI	RGATCY	3 cut(s)	477, 570, 850
MhlI	GDGCHC	1 cut(s)	584
MlyI	GAGTC	4 cut(s)	275, 533, 1279, 1913
Mph1103I	ATGCAT	1 cut(s)	220
MseI	TTAA	5 cut(s)	12, 491, 513, 1661, 1821
MspA1I	CMGCKG	1 cut(s)	1187
MspI	CCGG	4 cut(s)	260, 348, 366, 1268
MspR9I	CCNGG	5 cut(s)	297, 348, 1102, 1268, 1463
MunI	CAATTG	1 cut(s)	1500
Mva1269I	GAATGC	1 cut(s)	1758
MvaI	CCWGG	3 cut(s)	297, 1102, 1463
MwoI	GCNNNNNNNGC	5 cut(s)	229, 287, 301, 1762, 1970
NciI	CCSGG	2 cut(s)	348, 1268
NcoI	CCATGG	1 cut(s)	729
NdeII	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
NlaIII	CATG	5 cut(s)	733, 828, 980, 1780, 1897
NlaIV	GGNNCC	4 cut(s)	294, 423, 816, 1629
NmuCI	GTSAC	4 cut(s)	890, 1291, 1438, 1941
NsiI	ATGCAT	1 cut(s)	220
NspI	RCATGY	1 cut(s)	828
NspV	TTCGAA	1 cut(s)	1622
PciI	ACATGT	1 cut(s)	824
PctI	GAATGC	1 cut(s)	1758
PfeI	GAWTC	1 cut(s)	1562
PflMI	CCANNNNNTGG	1 cut(s)	1397
PkrI	GCNGC	8 cut(s)	197, 388, 438, 445, 724, 727, 871, 1758
PleI	GAGTC	4 cut(s)	274, 532, 1279, 1913
PpsI	GAGTC	4 cut(s)	274, 532, 1279, 1913
Ppu21I	YACGTR	1 cut(s)	881
PpuMI	RGGWCCY	1 cut(s)	1628
PscI	ACATGT	1 cut(s)	824
PshBI	ATTAAT	1 cut(s)	513
Psp5II	RGGWCCY	1 cut(s)	1628
Psp6I	CCWGG	3 cut(s)	295, 1100, 1461
PspGI	CCWGG	3 cut(s)	295, 1100, 1461
PspN4I	GGNNCC	4 cut(s)	294, 423, 816, 1629
PspPI	GGNCC	5 cut(s)	67, 884, 1465, 1628, 1732
PspPPI	RGGWCCY	1 cut(s)	1628
PstI	CTGCAG	1 cut(s)	673
PsuI	RGATCY	3 cut(s)	477, 570, 850
PvuII	CAGCTG	1 cut(s)	1187
RsaI	GTAC	3 cut(s)	405, 539, 1872
RsaNI	GTAC	3 cut(s)	404, 538, 1871
SaqAI	TTAA	5 cut(s)	12, 491, 513, 1661, 1821
SatI	GCNGC	8 cut(s)	196, 387, 437, 444, 723, 726, 870, 1757
Sau3AI	GATC	6 cut(s)	253, 372, 477, 570, 715, 850
Sau96I	GGNCC	5 cut(s)	67, 884, 1465, 1628, 1732
SchI	GAGTC	4 cut(s)	275, 533, 1279, 1913
ScrFI	CCNGG	5 cut(s)	297, 348, 1102, 1268, 1463
SduI	GDGCHC	1 cut(s)	584
SfaNI	GCATC	7 cut(s)	205, 227, 508, 835, 1012, 1033, 1688
SfcI	CTRYAG	2 cut(s)	669, 1408
SfuI	TTCGAA	1 cut(s)	1622
SinI	GGWCC	3 cut(s)	884, 1628, 1732
SmlI	CTYRAG	2 cut(s)	1311, 1434
SmoI	CTYRAG	2 cut(s)	1311, 1434
SsiI	CCGC	6 cut(s)	195, 263, 290, 434, 1757, 1763
SspI	AATATT	1 cut(s)	964
SspMI	CTAG	2 cut(s)	201, 1047
StyD4I	CCNGG	5 cut(s)	295, 346, 1100, 1266, 1461
StyI	CCWWGG	1 cut(s)	729
TaiI	ACGT	1 cut(s)	883
TaqI	TCGA	3 cut(s)	1038, 1622, 1975
TaqII	GACCGA	1 cut(s)	1238
TauI	GCSGC	2 cut(s)	198, 1759
TfiI	GAWTC	1 cut(s)	1562
Tru1I	TTAA	5 cut(s)	12, 491, 513, 1661, 1821
Tru9I	TTAA	5 cut(s)	12, 491, 513, 1661, 1821
TscAI	CASTG	5 cut(s)	366, 589, 1375, 1417, 1534
TseFI	GTSAC	4 cut(s)	890, 1291, 1438, 1941
TseI	GCWGC	6 cut(s)	386, 436, 443, 722, 725, 869
Tsp45I	GTSAC	4 cut(s)	890, 1291, 1438, 1941
TspDTI	ATGAA	7 cut(s)	129, 650, 929, 933, 1101, 1631, 1950
TspGWI	ACGGA	4 cut(s)	200, 715, 1609, 1917
TspRI	CASTG	5 cut(s)	366, 589, 1375, 1417, 1534
Van91I	CCANNNNNTGG	1 cut(s)	1397
VneI	GTGCAC	1 cut(s)	580
VpaK11BI	GGWCC	3 cut(s)	884, 1628, 1732
VspI	ATTAAT	1 cut(s)	513
XapI	RAATTY	5 cut(s)	8, 61, 760, 1550, 1796
XceI	RCATGY	1 cut(s)	828
XcmI	CCANNNNNNNNNTGG	2 cut(s)	581, 1228
XmiI	GTMKAC	1 cut(s)	877
XspI	CTAG	2 cut(s)	201, 1047
Zsp2I	ATGCAT	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.