Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005118

Physical Location & Seq

Genomic Coordinates Reverse (-)

80731673 .. 80737203

Gene Structure 5531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53381

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGACCGAAAATCTCTCCGGAAGGAACAGTAAACCACCGGCAATGACGGAGGAGAGCGGCGCTAGGGTTTCCAATGATGCATCGCAAACAAGGCAAAGAAAGAAAAGAAAGTGGGATCAACCGGCGGAGTCATTGGTTTCAGCTGGTTTAGCGGTGCCTGGGGCGCTCCCATTAGGCAATGTGGGATTGCTTGGTGGGATGACGCTTCCCGGTGTAAGTCCAATGTCCGGTGCGATCAATCCACTTGCTGCTGGCTTTCCTACTGTACCGCAGGCGTATCAGGTGCCTCTGATACCGCAGCAAGCTGCAACAGTTATCCAGAAACTAATACAACCAAAGATCCAAGATGAGTTAATAGCACGAGAAATTGTTATTAATGATGCAGAGTCTTCTATTCGGTACAAGCTGACAAAACGCCAAACACAGGAGGAGATCCAAAGGTGCACTGGTGCTGTGGTGATAACAAGGGGCAAGTATCATCCACCAAATGCGTCAACTGATGGTGAAAAGCCATTATATCTTCATATTTCTGCAGGGGCTAATATAAAAGAGACGACAGAACGGATTTTAGCAGTTGATCGTGCTGCTGCCATGGTTGAAGAAATGTTGAAACAGGGTCAAAATTTACATCCCTTGTCATTGTCGTCTCTTTCTACCGTGAGTAATGGACTGAAGGAACCAAGCACATGTGCATATCTGGGCTTTGATGCAGATCCATCATTGAACATTGCTGCCCGTATACGTGGACCAAGTGACCAGTATATAAATCACATTATGAATGAAACAGGAGCAACTGTCTTACTCAGAGGGCGTGGTTCAGGAAATATTGATTGTTTACATGGTGAAGAAGGACAACAACCATTGCATCTGTTCTTGTCAAGTAATAATTTGAAAAGTCTCGAAGATGCTAGGCTTTTGGCTGAACATCTTTTGGATACAATCAGCGTAGAGTGTGGTGTCTCCAGGGTTTCTTCATCTAAGGTTTATAGTGCTATTGCACCCCCACAGCAGGTATATAGTGCTGTTCCTCCACCACATCAGTTGTCGGCTGGAGTTCAGAGTTCTGGAAATGAGGTAAAGGCCATTACAACTTTGGCGTCTGCAACTGTCGGTCTTACACCAGCTCCCCCAGTTTCCTCAGTTGGGACTCCTGTGACCACTACCATTTTTACTCAAGGGACAGTATCTCAGTCTGGAGGATTTTCAAACGGTGTGCAATCTCAGTCAAGCAGTGGTGGTTGTCCACAACTTCCATCTGGTGGAACAATCTACAGTGGATATGGTGGGATATATCCTCAAGTCACACCTTTACAACAAGTTGCCCTGGCCCTTAGACAGTCAACATCCCCTATCACTTCTACAATTGCTCCCACAACATCAGTCCCAAGCACTGAACCAAAGTTGAATACGAAATTCAGTTCTGATTCTGAGAAGGAAAAACGGCCTCCACAAAGACGGAAGTTTCAGGAGTTACCAGTTAGTTCGAAGGGTCCTGCCAAAGTTCATCAGGAATTGGACTTATTAAAGCCACCTGAACTGGCATCAGATTTGGGTGTGAGAAATGTATCAACTATGCCAGCTCCAAAGAAATTGTTCCAGCAGGTTTCAAATGGAATGCCGCCACCGCCACCCAGAACCATGCCTCCACCTCCACCAAAATTTACATCATCAACACAGGTTGTTAAAGAGACTGACAAGAACAATGTTCTGAAAAAGACAAAATCTGATAATGTACCTGATACTTTGGTCAAGCTCATGGAATATGGAGAAGATGATGATGACTCTGAGGAAACTGATGAACAGTCACCCAATAGCAACCCTGTTGCAGTAACAGCTCGAAAGCCTTTCTGGGCTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

619

Amino Acids

65.92

Weight (kDa)

8.11

Isoelectric Point (pI)

53.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_12	PF23469	119 - 207	2.5e-35	KH-domain
KH-I_KHDC4-BBP	PF22675	237 - 312	9.4e-26	KHDC4/BBP-like, KH-domain type I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29390 AT3G29390
fragaria_vesca	FvH4_6g46910 FvH4_6g46910 FvH4_6g46910 FvH4_6g46910
malus_domestica	MD09G1066300.v1.1 MD09G1066400.v1.1
prunus_persica	Prupe.3G255200_v2.0.a1 Prupe.3G255200_v2.0.a1
pyrus_communis	pycom111g05570
rosa_chinensis	RchiOBHm_Chr2g0165881
rosa_laevigata	RLG00000021564
rosa_multiflora	Rmu_co8354311.1_g000001 Rmu_sc0001982.1_g000006 Rmu_sc0006218.1_g000001 Rmu_sc0006218.1_g000002 Rmu_sc0008709.1_g000009 Rmu_sc0013817.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085390
rosa_rugosa	Rorug02G0518600 Rorug02G0518700 Rorug02G0518800 Rorug05G0064400 Rorug05G0462700
rosa_samantha	Rh2AG584500 Rh2BG596300 Rh2CG567200 Rh2DG606100
rosa_wichuraiana	Rw2G048730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1000, 1591
AccB1I	GGYRCC	2 cut(s)	154, 283
AccB7I	CCANNNNNTGG	1 cut(s)	1259
AccBSI	CCGCTC	1 cut(s)	57
AccI	GTMKAC	1 cut(s)	739
AccIII	TCCGGA	1 cut(s)	17
AciI	CCGC	7 cut(s)	57, 125, 152, 269, 296, 1619, 1625
AclWI	GGATC	4 cut(s)	123, 334, 427, 707
AcsI	RAATTY	3 cut(s)	622, 1412, 1658
AcuI	CTGAAG	1 cut(s)	692
AcyI	GRCGYC	1 cut(s)	1097
AfaI	GTAC	3 cut(s)	267, 401, 1734
AfiI	CCNNNNNNNGG	5 cut(s)	227, 424, 1009, 1143, 1259
AflIII	ACRYGT	1 cut(s)	686
AgsI	TTSAA	7 cut(s)	599, 610, 724, 892, 1206, 1405, 1608
AjnI	CCWGG	3 cut(s)	157, 962, 1323
AloI	GAACNNNNNNTCC	2 cut(s)	1627, 1659
AluBI	AGCT	7 cut(s)	143, 305, 406, 1124, 1580, 1753, 1835
AluI	AGCT	7 cut(s)	143, 305, 406, 1124, 1580, 1753, 1835
Alw21I	GWGCWC	1 cut(s)	446
Alw26I	GTCTC	5 cut(s)	545, 651, 902, 964, 1682
Alw44I	GTGCAC	1 cut(s)	442
AlwI	GGATC	4 cut(s)	123, 334, 427, 707
Aor13HI	TCCGGA	1 cut(s)	17
AoxI	GGCC	3 cut(s)	1080, 1326, 1442
ApaLI	GTGCAC	1 cut(s)	442
ApeKI	GCWGC	6 cut(s)	248, 298, 305, 584, 587, 731
ApoI	RAATTY	3 cut(s)	622, 1412, 1658
AseI	ATTAAT	1 cut(s)	375
Asp700I	GAANNNNTTC	1 cut(s)	1592
AspLEI	GCGC	2 cut(s)	62, 166
AspS9I	GGNCC	3 cut(s)	746, 1327, 1490
AsuC2I	CCSGG	1 cut(s)	210
AsuHPI	GGTGA	4 cut(s)	469, 515, 854, 1797
AsuII	TTCGAA	1 cut(s)	1484
AvaII	GGWCC	2 cut(s)	746, 1490
BaeGI	GKGCMC	1 cut(s)	446
BaeI	ACNNNNGTAYC	2 cut(s)	1731, 1764
BanI	GGYRCC	2 cut(s)	154, 283
BauI	CACGAG	1 cut(s)	360
BbsI	GAAGAC	1 cut(s)	381
Bbv12I	GWGCWC	1 cut(s)	446
BbvI	GCAGC	6 cut(s)	235, 292, 310, 571, 574, 718
BccI	CCATC	3 cut(s)	494, 724, 1261
BceAI	ACGGC	1 cut(s)	1457
BciT130I	CCWGG	3 cut(s)	159, 964, 1325
BciVI	GTATCC	1 cut(s)	928
BcnI	CCSGG	1 cut(s)	210
BcoDI	GTCTC	5 cut(s)	545, 651, 902, 964, 1682
BfaI	CTAG	2 cut(s)	63, 909
BfmI	CTRYAG	2 cut(s)	531, 1270
BfoI	RGCGCY	2 cut(s)	63, 167
BfuAI	ACCTGC	2 cut(s)	1000, 1591
BfuI	GTATCC	1 cut(s)	928
BisI	GCNGC	8 cut(s)	58, 249, 299, 306, 585, 588, 732, 1619
BlsI	GCNGC	8 cut(s)	59, 250, 300, 307, 586, 589, 733, 1620
Bme1390I	CCNGG	4 cut(s)	159, 210, 964, 1325
Bme18I	GGWCC	2 cut(s)	746, 1490
BmgT120I	GGNCC	3 cut(s)	746, 1327, 1490
BmiI	GGNNCC	4 cut(s)	156, 285, 678, 1491
BmrFI	CCNGG	4 cut(s)	159, 210, 964, 1325
BmrI	ACTGGG	1 cut(s)	1124
BmsI	GCATC	7 cut(s)	67, 89, 370, 697, 874, 895, 1550
BmuI	ACTGGG	1 cut(s)	1124
BpiI	GAAGAC	1 cut(s)	381
BpmI	CTGGAG	3 cut(s)	946, 1071, 1215
Bpu14I	TTCGAA	1 cut(s)	1484
BpuEI	CTTGAG	2 cut(s)	1158, 1281
BpuMI	CCSGG	1 cut(s)	210
BsaAI	YACGTR	1 cut(s)	743
BsaBI	GATNNNNATC	1 cut(s)	711
BsaHI	GRCGYC	1 cut(s)	1097
BsaJI	CCNNGG	4 cut(s)	158, 591, 963, 1323
BsaWI	WCCGGW	2 cut(s)	17, 227
BsaXI	ACNNNNNCTCC	8 cut(s)	780, 810, 1108, 1138, 1351, 1381, 1627, 1657
Bsc4I	CCNNNNNNNGG	5 cut(s)	227, 424, 1009, 1143, 1259
Bse118I	RCCGGY	2 cut(s)	37, 121
Bse1I	ACTGG	5 cut(s)	451, 757, 1130, 1475, 1542
Bse3DI	GCAATG	4 cut(s)	48, 184, 726, 860
Bse8I	GATNNNNATC	1 cut(s)	711
BseAI	TCCGGA	1 cut(s)	17
BseBI	CCWGG	3 cut(s)	159, 964, 1325
BseDI	CCNNGG	4 cut(s)	158, 591, 963, 1323
BseGI	GGATG	4 cut(s)	204, 478, 628, 1343
BseJI	GATNNNNATC	1 cut(s)	711
BseLI	CCNNNNNNNGG	5 cut(s)	227, 424, 1009, 1143, 1259
BseMI	GCAATG	4 cut(s)	48, 184, 726, 860
BseMII	CTCAG	6 cut(s)	817, 1152, 1202, 1235, 1419, 1776
BseNI	ACTGG	5 cut(s)	451, 757, 1130, 1475, 1542
BseRI	GAGGAG	2 cut(s)	65, 443
BseSI	GKGCMC	1 cut(s)	446
BseXI	GCAGC	6 cut(s)	235, 292, 310, 571, 574, 718
BshFI	GGCC	3 cut(s)	1082, 1328, 1444
BshNI	GGYRCC	2 cut(s)	154, 283
BsiHKAI	GWGCWC	1 cut(s)	446
BsiSI	CCGG	5 cut(s)	18, 38, 122, 210, 228
BslFI	GGGAC	3 cut(s)	1159, 1192, 1367
BslI	CCNNNNNNNGG	5 cut(s)	227, 424, 1009, 1143, 1259
BsmAI	GTCTC	5 cut(s)	545, 651, 902, 964, 1682
BsmBI	CGTCTC	2 cut(s)	545, 651
BsmFI	GGGAC	3 cut(s)	1159, 1192, 1367
BsmI	GAATGC	1 cut(s)	1620
BsnI	GGCC	3 cut(s)	1082, 1328, 1444
Bsp119I	TTCGAA	1 cut(s)	1484
Bsp1286I	GDGCHC	1 cut(s)	446
Bsp13I	TCCGGA	1 cut(s)	17
Bsp143I	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
Bsp19I	CCATGG	1 cut(s)	591
BspACI	CCGC	7 cut(s)	57, 125, 152, 269, 296, 1619, 1625
BspANI	GGCC	3 cut(s)	1082, 1328, 1444
BspCNI	CTCAG	6 cut(s)	816, 1151, 1201, 1234, 1420, 1777
BspEI	TCCGGA	1 cut(s)	17
BspLI	GGNNCC	4 cut(s)	156, 285, 678, 1491
BspMAI	CTGCAG	1 cut(s)	535
BspMI	ACCTGC	2 cut(s)	1000, 1591
BspPI	GGATC	4 cut(s)	123, 334, 427, 707
BspT104I	TTCGAA	1 cut(s)	1484
BspT107I	GGYRCC	2 cut(s)	154, 283
BsrBI	CCGCTC	1 cut(s)	57
BsrDI	GCAATG	4 cut(s)	48, 184, 726, 860
BsrFI	RCCGGY	2 cut(s)	37, 121
BsrI	ACTGG	5 cut(s)	451, 757, 1130, 1475, 1542
BssAI	RCCGGY	2 cut(s)	37, 121
BssECI	CCNNGG	4 cut(s)	158, 591, 963, 1323
BssMI	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
BssNAI	GTATAC	1 cut(s)	740
BssNI	GRCGYC	1 cut(s)	1097
BssSI	CACGAG	1 cut(s)	360
BssT1I	CCWWGG	1 cut(s)	591
Bst1107I	GTATAC	1 cut(s)	740
Bst2BI	CACGAG	1 cut(s)	360
Bst2UI	CCWGG	3 cut(s)	159, 964, 1325
BstACI	GRCGYC	1 cut(s)	1097
BstBAI	YACGTR	1 cut(s)	743
BstBI	TTCGAA	1 cut(s)	1484
BstC8I	GCNNGC	4 cut(s)	253, 273, 303, 1578
BstDEI	CTNAG	8 cut(s)	803, 978, 1138, 1188, 1221, 1331, 1428, 1785
BstDSI	CCRYGG	1 cut(s)	591
BstF5I	GGATG	4 cut(s)	204, 478, 628, 1343
BstH2I	RGCGCY	2 cut(s)	63, 167
BstHHI	GCGC	2 cut(s)	62, 166
BstKTI	GATC	6 cut(s)	118, 237, 342, 435, 580, 715
BstMAI	GTCTC	5 cut(s)	545, 651, 902, 964, 1682
BstMBI	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
BstMWI	GCNNNNNNNGC	5 cut(s)	91, 149, 163, 1624, 1832
BstNI	CCWGG	3 cut(s)	159, 964, 1325
BstNSI	RCATGY	1 cut(s)	690
BstSCI	CCNGG	4 cut(s)	157, 208, 962, 1323
BstSFI	CTRYAG	2 cut(s)	531, 1270
BstSLI	GKGCMC	1 cut(s)	446
BstV1I	GCAGC	6 cut(s)	235, 292, 310, 571, 574, 718
BstV2I	GAAGAC	1 cut(s)	381
BstX2I	RGATCY	3 cut(s)	339, 432, 712
BstYI	RGATCY	3 cut(s)	339, 432, 712
BstZ17I	GTATAC	1 cut(s)	740
BsuI	GTATCC	1 cut(s)	928
BsuRI	GGCC	3 cut(s)	1082, 1328, 1444
BtgI	CCRYGG	1 cut(s)	591
BtgZI	GCGATG	1 cut(s)	66
BtsCI	GGATG	4 cut(s)	204, 478, 628, 1343
BtsI	GCAGTG	1 cut(s)	1237
BtsIMutI	CAGTG	4 cut(s)	444, 1237, 1279, 1389
BveI	ACCTGC	2 cut(s)	1000, 1591
Cac8I	GCNNGC	4 cut(s)	253, 273, 303, 1578
CfoI	GCGC	2 cut(s)	62, 166
Cfr10I	RCCGGY	2 cut(s)	37, 121
Cfr13I	GGNCC	3 cut(s)	746, 1327, 1490
CseI	GACGC	3 cut(s)	211, 480, 1086
Csp6I	GTAC	3 cut(s)	266, 400, 1733
CspCI	CAANNNNNGTGG	2 cut(s)	1023, 1058
CviAII	CATG	5 cut(s)	592, 687, 839, 1639, 1756
CviQI	GTAC	3 cut(s)	266, 400, 1733
DdeI	CTNAG	8 cut(s)	803, 978, 1138, 1188, 1221, 1331, 1428, 1785
DpnI	GATC	6 cut(s)	117, 236, 341, 434, 579, 714
DpnII	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
EciI	GGCGGA	1 cut(s)	140
Eco130I	CCWWGG	1 cut(s)	591
Eco47I	GGWCC	2 cut(s)	746, 1490
Eco57I	CTGAAG	1 cut(s)	692
EcoO109I	RGGNCCY	1 cut(s)	1490
EcoRII	CCWGG	3 cut(s)	157, 962, 1323
EcoT14I	CCWWGG	1 cut(s)	591
EcoT22I	ATGCAT	1 cut(s)	82
ErhI	CCWWGG	1 cut(s)	591
Esp3I	CGTCTC	2 cut(s)	545, 651
FaeI	CATG	5 cut(s)	595, 690, 842, 1642, 1759
FaqI	GGGAC	3 cut(s)	1159, 1192, 1367
FatI	CATG	5 cut(s)	591, 686, 838, 1638, 1755
FblI	GTMKAC	1 cut(s)	739
Fnu4HI	GCNGC	8 cut(s)	58, 249, 299, 306, 585, 588, 732, 1619
FokI	GGATG	4 cut(s)	211, 465, 615, 1330
Fsp4HI	GCNGC	8 cut(s)	58, 249, 299, 306, 585, 588, 732, 1619
FspBI	CTAG	2 cut(s)	63, 909
GlaI	GCGC	2 cut(s)	61, 165
GluI	GCNGC	8 cut(s)	58, 249, 299, 306, 585, 588, 732, 1619
GsuI	CTGGAG	3 cut(s)	946, 1071, 1215
HaeII	RGCGCY	2 cut(s)	63, 167
HaeIII	GGCC	3 cut(s)	1082, 1328, 1444
HapII	CCGG	5 cut(s)	18, 38, 122, 210, 228
HgaI	GACGC	3 cut(s)	211, 480, 1086
HhaI	GCGC	2 cut(s)	62, 166
Hin1I	GRCGYC	1 cut(s)	1097
Hin1II	CATG	5 cut(s)	595, 690, 842, 1642, 1759
Hin6I	GCGC	2 cut(s)	60, 164
HinP1I	GCGC	2 cut(s)	60, 164
HincII	GTYRAC	2 cut(s)	495, 1341
HindII	GTYRAC	2 cut(s)	495, 1341
HinfI	GANTC	5 cut(s)	128, 386, 1147, 1424, 1781
HpaII	CCGG	5 cut(s)	18, 38, 122, 210, 228
HphI	GGTGA	4 cut(s)	469, 515, 854, 1797
Hpy166II	GTNNAC	8 cut(s)	32, 444, 495, 740, 746, 836, 1244, 1341
Hpy188I	TCNGA	9 cut(s)	291, 806, 1059, 1423, 1429, 1546, 1710, 1726, 1786
Hpy188III	TCNNGA	8 cut(s)	18, 319, 819, 899, 1065, 1194, 1466, 1508
Hpy8I	GTNNAC	8 cut(s)	32, 444, 495, 740, 746, 836, 1244, 1341
HpyAV	CCTTC	5 cut(s)	15, 667, 842, 1426, 1480
HpyCH4IV	ACGT	1 cut(s)	742
HpyF10VI	GCNNNNNNNGC	5 cut(s)	91, 149, 163, 1624, 1832
HpyF3I	CTNAG	8 cut(s)	803, 978, 1138, 1188, 1221, 1331, 1428, 1785
HpySE526I	ACGT	1 cut(s)	742
Hsp92I	GRCGYC	1 cut(s)	1097
Hsp92II	CATG	5 cut(s)	595, 690, 842, 1642, 1759
HspAI	GCGC	2 cut(s)	60, 164
Kpn2I	TCCGGA	1 cut(s)	17
Kzo9I	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
LmnI	GCTCC	5 cut(s)	171, 788, 1129, 1372, 1585
Lsp1109I	GCAGC	6 cut(s)	235, 292, 310, 571, 574, 718
LweI	GCATC	7 cut(s)	67, 89, 370, 697, 874, 895, 1550
MaeI	CTAG	2 cut(s)	63, 909
MaeII	ACGT	1 cut(s)	742
MaeIII	GTNAC	6 cut(s)	752, 1153, 1300, 1470, 1803, 1828
MalI	GATC	6 cut(s)	117, 236, 341, 434, 579, 714
MbiI	CCGCTC	1 cut(s)	57
MboI	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
MboII	GAAGA	7 cut(s)	381, 512, 611, 857, 914, 963, 1781
MfeI	CAATTG	1 cut(s)	1362
MflI	RGATCY	3 cut(s)	339, 432, 712
MhlI	GDGCHC	1 cut(s)	446
MluCI	AATT	8 cut(s)	366, 622, 886, 1362, 1412, 1511, 1589, 1658
MlyI	GAGTC	4 cut(s)	137, 395, 1141, 1775
Mph1103I	ATGCAT	1 cut(s)	82
MroI	TCCGGA	1 cut(s)	17
MroXI	GAANNNNTTC	1 cut(s)	1592
MseI	TTAA	4 cut(s)	353, 375, 1523, 1683
MspA1I	CMGCKG	1 cut(s)	143
MspI	CCGG	5 cut(s)	18, 38, 122, 210, 228
MspR9I	CCNGG	4 cut(s)	159, 210, 964, 1325
MunI	CAATTG	1 cut(s)	1362
Mva1269I	GAATGC	1 cut(s)	1620
MvaI	CCWGG	3 cut(s)	159, 964, 1325
MwoI	GCNNNNNNNGC	5 cut(s)	91, 149, 163, 1624, 1832
NciI	CCSGG	1 cut(s)	210
NcoI	CCATGG	1 cut(s)	591
NdeII	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
NlaIII	CATG	5 cut(s)	595, 690, 842, 1642, 1759
NlaIV	GGNNCC	4 cut(s)	156, 285, 678, 1491
NmuCI	GTSAC	4 cut(s)	752, 1153, 1300, 1803
NsiI	ATGCAT	1 cut(s)	82
NspI	RCATGY	1 cut(s)	690
NspV	TTCGAA	1 cut(s)	1484
PciI	ACATGT	1 cut(s)	686
PctI	GAATGC	1 cut(s)	1620
PdmI	GAANNNNTTC	1 cut(s)	1592
PfeI	GAWTC	1 cut(s)	1424
PflMI	CCANNNNNTGG	1 cut(s)	1259
PkrI	GCNGC	8 cut(s)	59, 250, 300, 307, 586, 589, 733, 1620
PleI	GAGTC	4 cut(s)	136, 394, 1141, 1775
PpsI	GAGTC	4 cut(s)	136, 394, 1141, 1775
Ppu21I	YACGTR	1 cut(s)	743
PpuMI	RGGWCCY	1 cut(s)	1490
PscI	ACATGT	1 cut(s)	686
PshBI	ATTAAT	1 cut(s)	375
Psp5II	RGGWCCY	1 cut(s)	1490
Psp6I	CCWGG	3 cut(s)	157, 962, 1323
PspGI	CCWGG	3 cut(s)	157, 962, 1323
PspN4I	GGNNCC	4 cut(s)	156, 285, 678, 1491
PspPI	GGNCC	3 cut(s)	746, 1327, 1490
PspPPI	RGGWCCY	1 cut(s)	1490
PstI	CTGCAG	1 cut(s)	535
PsuI	RGATCY	3 cut(s)	339, 432, 712
PvuII	CAGCTG	1 cut(s)	143
RsaI	GTAC	3 cut(s)	267, 401, 1734
RsaNI	GTAC	3 cut(s)	266, 400, 1733
SaqAI	TTAA	4 cut(s)	353, 375, 1523, 1683
SatI	GCNGC	8 cut(s)	58, 249, 299, 306, 585, 588, 732, 1619
Sau3AI	GATC	6 cut(s)	115, 234, 339, 432, 577, 712
Sau96I	GGNCC	3 cut(s)	746, 1327, 1490
SchI	GAGTC	4 cut(s)	137, 395, 1141, 1775
ScrFI	CCNGG	4 cut(s)	159, 210, 964, 1325
SduI	GDGCHC	1 cut(s)	446
SfaNI	GCATC	7 cut(s)	67, 89, 370, 697, 874, 895, 1550
SfcI	CTRYAG	2 cut(s)	531, 1270
SfuI	TTCGAA	1 cut(s)	1484
SinI	GGWCC	2 cut(s)	746, 1490
SmlI	CTYRAG	2 cut(s)	1173, 1296
SmoI	CTYRAG	2 cut(s)	1173, 1296
Sse9I	AATT	8 cut(s)	366, 622, 886, 1362, 1412, 1511, 1589, 1658
SsiI	CCGC	7 cut(s)	57, 125, 152, 269, 296, 1619, 1625
SspI	AATATT	1 cut(s)	826
SspMI	CTAG	2 cut(s)	63, 909
StyD4I	CCNGG	4 cut(s)	157, 208, 962, 1323
StyI	CCWWGG	1 cut(s)	591
TaiI	ACGT	1 cut(s)	745
TaqI	TCGA	3 cut(s)	900, 1484, 1837
TaqII	GACCGA	2 cut(s)	20, 1100
TasI	AATT	8 cut(s)	366, 622, 886, 1362, 1412, 1511, 1589, 1658
TauI	GCSGC	2 cut(s)	60, 1621
TfiI	GAWTC	1 cut(s)	1424
Tru1I	TTAA	4 cut(s)	353, 375, 1523, 1683
Tru9I	TTAA	4 cut(s)	353, 375, 1523, 1683
TscAI	CASTG	4 cut(s)	451, 1237, 1279, 1396
TseFI	GTSAC	4 cut(s)	752, 1153, 1300, 1803
TseI	GCWGC	6 cut(s)	248, 298, 305, 584, 587, 731
Tsp45I	GTSAC	4 cut(s)	752, 1153, 1300, 1803
TspDTI	ATGAA	6 cut(s)	512, 791, 795, 963, 1493, 1812
TspGWI	ACGGA	3 cut(s)	62, 577, 1471
TspRI	CASTG	4 cut(s)	451, 1237, 1279, 1396
Van91I	CCANNNNNTGG	1 cut(s)	1259
VneI	GTGCAC	1 cut(s)	442
VpaK11BI	GGWCC	2 cut(s)	746, 1490
VspI	ATTAAT	1 cut(s)	375
XapI	RAATTY	3 cut(s)	622, 1412, 1658
XceI	RCATGY	1 cut(s)	690
XcmI	CCANNNNNNNNNTGG	2 cut(s)	443, 1090
XmiI	GTMKAC	1 cut(s)	739
XmnI	GAANNNNTTC	1 cut(s)	1592
XspI	CTAG	2 cut(s)	63, 909
Zsp2I	ATGCAT	1 cut(s)	82

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.