Prupe.3G287100_v2.0.a1

Removes the formyl group from the N-terminal Met of newly synthesized proteins

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
25914301 .. 25916940
2640 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G287100.1

Sequence Viewer

Length: 816 bp
ATGGCTTGTGCGGCTTGGCTCCAGCCATTGTCCTCATCCCACGCTCTCTTTCCAACTCTCTGCCGCCGGCCGACTTTTCCCCCCATCTTCCACCGGCTCACTCGTTTCTCCTCAACCGTCCGGCTAGTATCCACCATGAACCGGTCGACTCCGGTCCACGCTCAGGCCAAACGAGGCTTCTCAGTCAAAGAAGACGAAGTGGCCACTGCTGCTGACGTTGAATTTGAGACGCCTCTGAAAATCGTGGAATATCCGGACCCTATACTGAGAGCGAAGAACAAGAGAATCGATTCGTTCGACGAAAATTTGAAGATTTTGGTAGACGAAATGTTTGATATAATGTACAAAACCGATGGCATAGGGCTCTCGGCGCCCCAAGTAGGGATCAATGTGCAGCTCATGGTGTTCAATCCAGTTGGTGAGCGTGGCGAAGGGGAGGAAATTGTGCTTGTGAATCCAAGGGTTTCCAGATATTCCCAGAAAACGCGACCCTTTAACGAGGGTTGCTTATCCTTCCCGGGGATTTATGCTGATGTTGTGAGACCAGAATCTGTGAAAATAGATGCACGGGACATCAACGGTGCAAGGTTTACAGTCAACTTGTCGGGTCTTCCAGCGCGGGTGTTCCAGCATGAATTTGACCATTTGCAGGGTATTCTCTTCTTTGATAGAATGAGTGAAGGAGTTCTTGAAACCATTTGTGCACAGCTACAGACCTTAGAAAAGAAGTACGAGGATAAGACAGGACTTCCAAGCCCTGAAAGGATCCAAACCCGCAAAAGGATGAAGGCTGCTACTGGTTTTGGCAAATCATAA

Protein Analysis

272

Amino Acids

30.51

Weight (kDa)

8.63

Isoelectric Point (pI)

47.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 370
AccI GTMKAC 2 cut(s) 146, 321
AccII CGCG 2 cut(s) 487, 619
AccIII TCCGGA 1 cut(s) 253
AciI CCGC 4 cut(s) 11, 64, 619, 775
AclWI GGATC 3 cut(s) 392, 760, 773
AcoI YGGCCR 2 cut(s) 68, 201
AcsI RAATTY 3 cut(s) 221, 304, 635
AcyI GRCGYC 2 cut(s) 230, 371
AfaI GTAC 2 cut(s) 344, 731
AfiI CCNNNNNNNGG 7 cut(s) 141, 163, 380, 381, 519, 649, 780
AgeI ACCGGT 1 cut(s) 141
AgsI TTSAA 4 cut(s) 221, 310, 409, 692
AjuI GAANNNNNNNTTGG 2 cut(s) 161, 193
AluBI AGCT 2 cut(s) 397, 709
AluI AGCT 2 cut(s) 397, 709
Alw21I GWGCWC 1 cut(s) 706
Alw26I GTCTC 2 cut(s) 221, 535
Alw44I GTGCAC 1 cut(s) 702
AlwI GGATC 3 cut(s) 392, 760, 773
AlwNI CAGNNNCTG 1 cut(s) 551
Ama87I CYCGRG 1 cut(s) 517
Aor13HI TCCGGA 1 cut(s) 253
AoxI GGCC 3 cut(s) 68, 165, 201
ApaLI GTGCAC 1 cut(s) 702
ApeKI GCWGC 3 cut(s) 209, 394, 791
ApoI RAATTY 3 cut(s) 221, 304, 635
ArsI GACNNNNNNTTYG 4 cut(s) 206, 238, 314, 346
AsiGI ACCGGT 1 cut(s) 141
Asp700I GAANNNNTTC 2 cut(s) 289, 684
AspLEI GCGC 2 cut(s) 373, 619
AspS9I GGNCC 2 cut(s) 154, 256
AsuC2I CCSGG 2 cut(s) 518, 519
AsuHPI GGTGA 1 cut(s) 431
AvaI CYCGRG 1 cut(s) 517
AvaII GGWCC 2 cut(s) 154, 256
BaeGI GKGCMC 1 cut(s) 706
BalI TGGCCA 1 cut(s) 203
BamHI GGATCC 1 cut(s) 765
BanI GGYRCC 1 cut(s) 370
BanII GRGCYC 1 cut(s) 366
BbsI GAAGAC 2 cut(s) 198, 602
Bbv12I GWGCWC 1 cut(s) 706
BbvI GCAGC 3 cut(s) 196, 406, 778
BccI CCATC 2 cut(s) 92, 347
BciVI GTATCC 1 cut(s) 139
BcnI CCSGG 2 cut(s) 518, 519
BcoDI GTCTC 2 cut(s) 221, 535
BfaI CTAG 1 cut(s) 125
BfmI CTRYAG 1 cut(s) 710
BfoI RGCGCY 1 cut(s) 374
BfuI GTATCC 1 cut(s) 139
BisI GCNGC 5 cut(s) 12, 64, 210, 395, 792
BlsI GCNGC 5 cut(s) 13, 65, 211, 396, 793
Bme1390I CCNGG 2 cut(s) 518, 519
Bme18I GGWCC 2 cut(s) 154, 256
BmeT110I CYCGRG 1 cut(s) 517
BmgT120I GGNCC 2 cut(s) 154, 256
BmiI GGNNCC 4 cut(s) 20, 258, 372, 767
BmrFI CCNGG 2 cut(s) 518, 519
BmsI GCATC 1 cut(s) 553
BoxI GACNNNNGTC 1 cut(s) 152
BpiI GAAGAC 2 cut(s) 198, 602
BpmI CTGGAG 1 cut(s) 5
Bpu10I CCTNAGC 1 cut(s) 162
BpuMI CCSGG 2 cut(s) 518, 519
Bsa29I ATCGAT 1 cut(s) 288
BsaHI GRCGYC 2 cut(s) 230, 371
BsaI GGTCTC 1 cut(s) 535
BsaJI CCNNGG 3 cut(s) 458, 517, 518
BsaWI WCCGGW 3 cut(s) 141, 151, 253
Bsc4I CCNNNNNNNGG 7 cut(s) 141, 163, 380, 381, 519, 649, 780
Bse118I RCCGGY 3 cut(s) 66, 93, 141
Bse1I ACTGG 2 cut(s) 413, 802
BseAI TCCGGA 1 cut(s) 253
BseCI ATCGAT 1 cut(s) 288
BseDI CCNNGG 3 cut(s) 458, 517, 518
BseGI GGATG 2 cut(s) 35, 789
BseLI CCNNNNNNNGG 7 cut(s) 141, 163, 380, 381, 519, 649, 780
BseMII CTCAG 3 cut(s) 176, 195, 257
BseNI ACTGG 2 cut(s) 413, 802
BseRI GAGGAG 1 cut(s) 100
BseSI GKGCMC 1 cut(s) 706
BseX3I CGGCCG 1 cut(s) 68
BseXI GCAGC 3 cut(s) 196, 406, 778
BsgI GTGCAG 1 cut(s) 413
Bsh1236I CGCG 2 cut(s) 487, 619
Bsh1285I CGRYCG 2 cut(s) 71, 146
BshFI GGCC 3 cut(s) 70, 167, 203
BshNI GGYRCC 1 cut(s) 370
BshTI ACCGGT 1 cut(s) 141
BshVI ATCGAT 1 cut(s) 288
BsiEI CGRYCG 2 cut(s) 71, 146
BsiHKAI GWGCWC 1 cut(s) 706
BsiHKCI CYCGRG 1 cut(s) 517
BsiSI CCGG 7 cut(s) 67, 94, 121, 142, 152, 254, 518
BslFI GGGAC 1 cut(s) 584
BslI CCNNNNNNNGG 7 cut(s) 141, 163, 380, 381, 519, 649, 780
BsmAI GTCTC 2 cut(s) 221, 535
BsmBI CGTCTC 1 cut(s) 221
BsmFI GGGAC 1 cut(s) 584
BsnI GGCC 3 cut(s) 70, 167, 203
Bso31I GGTCTC 1 cut(s) 535
BsoBI CYCGRG 1 cut(s) 517
Bsp1286I GDGCHC 2 cut(s) 366, 706
Bsp13I TCCGGA 1 cut(s) 253
Bsp1407I TGTACA 1 cut(s) 342
Bsp143I GATC 2 cut(s) 384, 765
BspACI CCGC 4 cut(s) 11, 64, 619, 775
BspANI GGCC 3 cut(s) 70, 167, 203
BspCNI CTCAG 3 cut(s) 175, 194, 258
BspDI ATCGAT 1 cut(s) 288
BspEI TCCGGA 1 cut(s) 253
BspFNI CGCG 2 cut(s) 487, 619
BspLI GGNNCC 4 cut(s) 20, 258, 372, 767
BspPI GGATC 3 cut(s) 392, 760, 773
BspT107I GGYRCC 1 cut(s) 370
BspTNI GGTCTC 1 cut(s) 535
BsrFI RCCGGY 3 cut(s) 66, 93, 141
BsrGI TGTACA 1 cut(s) 342
BsrI ACTGG 2 cut(s) 413, 802
BssAI RCCGGY 3 cut(s) 66, 93, 141
BssECI CCNNGG 3 cut(s) 458, 517, 518
BssMI GATC 2 cut(s) 384, 765
BssNI GRCGYC 2 cut(s) 230, 371
BssT1I CCWWGG 1 cut(s) 458
Bst4CI ACNGT 3 cut(s) 118, 581, 595
Bst6I CTCTTC 1 cut(s) 665
BstACI GRCGYC 2 cut(s) 230, 371
BstAUI TGTACA 1 cut(s) 342
BstC8I GCNNGC 1 cut(s) 68
BstDEI CTNAG 4 cut(s) 162, 181, 266, 718
BstF5I GGATG 2 cut(s) 35, 789
BstFNI CGCG 2 cut(s) 487, 619
BstH2I RGCGCY 1 cut(s) 374
BstHHI GCGC 2 cut(s) 373, 619
BstKTI GATC 2 cut(s) 387, 768
BstMAI GTCTC 2 cut(s) 221, 535
BstMBI GATC 2 cut(s) 384, 765
BstMCI CGRYCG 2 cut(s) 71, 146
BstMWI GCNNNNNNNGC 3 cut(s) 11, 209, 370
BstPAI GACNNNNGTC 1 cut(s) 152
BstSCI CCNGG 2 cut(s) 516, 517
BstSFI CTRYAG 1 cut(s) 710
BstSLI GKGCMC 1 cut(s) 706
BstUI CGCG 2 cut(s) 487, 619
BstV1I GCAGC 3 cut(s) 196, 406, 778
BstV2I GAAGAC 2 cut(s) 198, 602
BstX2I RGATCY 1 cut(s) 765
BstYI RGATCY 1 cut(s) 765
BstZI CGGCCG 1 cut(s) 68
Bsu15I ATCGAT 1 cut(s) 288
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 3 cut(s) 70, 167, 203
BsuTUI ATCGAT 1 cut(s) 288
BtsCI GGATG 2 cut(s) 35, 789
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 1 cut(s) 204
Cac8I GCNNGC 1 cut(s) 68
CaiI CAGNNNCTG 1 cut(s) 551
CfoI GCGC 2 cut(s) 373, 619
Cfr10I RCCGGY 3 cut(s) 66, 93, 141
Cfr13I GGNCC 2 cut(s) 154, 256
Cfr9I CCCGGG 1 cut(s) 517
ClaI ATCGAT 1 cut(s) 288
CseI GACGC 1 cut(s) 238
Csp6I GTAC 2 cut(s) 343, 730
CspAI ACCGGT 1 cut(s) 141
CviAII CATG 3 cut(s) 136, 400, 632
CviQI GTAC 2 cut(s) 343, 730
DdeI CTNAG 4 cut(s) 162, 181, 266, 718
DinI GGCGCC 1 cut(s) 372
DpnI GATC 2 cut(s) 386, 767
DpnII GATC 2 cut(s) 384, 765
EaeI YGGCCR 2 cut(s) 68, 201
EagI CGGCCG 1 cut(s) 68
Eam1104I CTCTTC 1 cut(s) 665
EarI CTCTTC 1 cut(s) 665
EclXI CGGCCG 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 458
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 1 cut(s) 535
Eco47I GGWCC 2 cut(s) 154, 256
Eco52I CGGCCG 1 cut(s) 68
Eco88I CYCGRG 1 cut(s) 517
EcoT14I CCWWGG 1 cut(s) 458
EcoT38I GRGCYC 1 cut(s) 366
EgeI GGCGCC 1 cut(s) 372
EheI GGCGCC 1 cut(s) 372
ErhI CCWWGG 1 cut(s) 458
Esp3I CGTCTC 1 cut(s) 221
FaeI CATG 3 cut(s) 139, 403, 635
FaiI YATR 8 cut(s) 137, 263, 338, 359, 401, 528, 633, 814
FalI AAGNNNNNCTT 2 cut(s) 672, 704
FaqI GGGAC 1 cut(s) 584
FatI CATG 3 cut(s) 135, 399, 631
FauI CCCGC 2 cut(s) 612, 782
FblI GTMKAC 2 cut(s) 146, 321
Fnu4HI GCNGC 5 cut(s) 12, 64, 210, 395, 792
FokI GGATG 2 cut(s) 22, 796
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 5 cut(s) 12, 64, 210, 395, 792
FspBI CTAG 1 cut(s) 125
GlaI GCGC 2 cut(s) 372, 618
GluI GCNGC 5 cut(s) 12, 64, 210, 395, 792
GsuI CTGGAG 1 cut(s) 5
HaeII RGCGCY 1 cut(s) 374
HaeIII GGCC 3 cut(s) 70, 167, 203
HapII CCGG 7 cut(s) 67, 94, 121, 142, 152, 254, 518
HgaI GACGC 1 cut(s) 238
HhaI GCGC 2 cut(s) 373, 619
Hin1I GRCGYC 2 cut(s) 230, 371
Hin1II CATG 3 cut(s) 139, 403, 635
Hin6I GCGC 2 cut(s) 371, 617
HinP1I GCGC 2 cut(s) 371, 617
HincII GTYRAC 2 cut(s) 147, 598
HindII GTYRAC 2 cut(s) 147, 598
HinfI GANTC 5 cut(s) 148, 285, 290, 454, 548
HpaII CCGG 7 cut(s) 67, 94, 121, 142, 152, 254, 518
HphI GGTGA 1 cut(s) 431
Hpy166II GTNNAC 6 cut(s) 147, 157, 322, 591, 598, 704
Hpy188I TCNGA 1 cut(s) 237
Hpy188III TCNNGA 3 cut(s) 254, 468, 689
Hpy8I GTNNAC 6 cut(s) 147, 157, 322, 591, 598, 704
Hpy99I CGWCG 1 cut(s) 302
HpyAV CCTTC 4 cut(s) 425, 523, 674, 781
HpyCH4III ACNGT 3 cut(s) 118, 581, 595
HpyCH4IV ACGT 1 cut(s) 216
HpyCH4V TGCA 5 cut(s) 394, 566, 584, 649, 704
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 209, 370
HpyF3I CTNAG 4 cut(s) 162, 181, 266, 718
HpySE526I ACGT 1 cut(s) 216
Hsp92I GRCGYC 2 cut(s) 230, 371
Hsp92II CATG 3 cut(s) 139, 403, 635
HspAI GCGC 2 cut(s) 371, 617
KasI GGCGCC 1 cut(s) 370
Kpn2I TCCGGA 1 cut(s) 253
KroI GCCGGC 1 cut(s) 66
KroNI GCCGGC 1 cut(s) 68
Kzo9I GATC 2 cut(s) 384, 765
LmnI GCTCC 1 cut(s) 24
Lsp1109I GCAGC 3 cut(s) 196, 406, 778
LweI GCATC 1 cut(s) 553
MaeI CTAG 1 cut(s) 125
MaeII ACGT 1 cut(s) 216
MalI GATC 2 cut(s) 386, 767
MboI GATC 2 cut(s) 384, 765
MboII GAAGA 6 cut(s) 79, 203, 286, 322, 602, 652
MflI RGATCY 1 cut(s) 765
MhlI GDGCHC 2 cut(s) 366, 706
MlsI TGGCCA 1 cut(s) 203
MluCI AATT 4 cut(s) 221, 304, 441, 635
MluNI TGGCCA 1 cut(s) 203
Mly113I GGCGCC 1 cut(s) 371
MlyI GAGTC 1 cut(s) 142
MmeI TCCRAC 1 cut(s) 77
MnlI CCTC 7 cut(s) 43, 121, 167, 243, 430, 493, 727
Mox20I TGGCCA 1 cut(s) 203
MroI TCCGGA 1 cut(s) 253
MroNI GCCGGC 1 cut(s) 66
MroXI GAANNNNTTC 2 cut(s) 289, 684
MscI TGGCCA 1 cut(s) 203
MseI TTAA 1 cut(s) 495
Msp20I TGGCCA 1 cut(s) 203
MspI CCGG 7 cut(s) 67, 94, 121, 142, 152, 254, 518
MspR9I CCNGG 2 cut(s) 518, 519
MvnI CGCG 2 cut(s) 487, 619
MwoI GCNNNNNNNGC 3 cut(s) 11, 209, 370
NaeI GCCGGC 1 cut(s) 68
NarI GGCGCC 1 cut(s) 371
NciI CCSGG 2 cut(s) 518, 519
NdeII GATC 2 cut(s) 384, 765
NgoMIV GCCGGC 1 cut(s) 66
NlaIII CATG 3 cut(s) 139, 403, 635
NlaIV GGNNCC 4 cut(s) 20, 258, 372, 767
NmeAIII GCCGAG 1 cut(s) 347
PcsI WCGNNNNNNNCGW 1 cut(s) 294
PdiI GCCGGC 1 cut(s) 68
PdmI GAANNNNTTC 2 cut(s) 289, 684
PfeI GAWTC 4 cut(s) 285, 290, 454, 548
PinAI ACCGGT 1 cut(s) 141
PkrI GCNGC 5 cut(s) 13, 65, 211, 396, 793
PleI GAGTC 1 cut(s) 142
PluTI GGCGCC 1 cut(s) 374
PpsI GAGTC 1 cut(s) 142
PshAI GACNNNNGTC 1 cut(s) 152
PspN4I GGNNCC 4 cut(s) 20, 258, 372, 767
PspPI GGNCC 2 cut(s) 154, 256
PstNI CAGNNNCTG 1 cut(s) 551
PsuI RGATCY 1 cut(s) 765
RsaI GTAC 2 cut(s) 344, 731
RsaNI GTAC 2 cut(s) 343, 730
SalI GTCGAC 1 cut(s) 145
SaqAI TTAA 1 cut(s) 495
SatI GCNGC 5 cut(s) 12, 64, 210, 395, 792
Sau3AI GATC 2 cut(s) 384, 765
Sau96I GGNCC 2 cut(s) 154, 256
SchI GAGTC 1 cut(s) 142
ScrFI CCNGG 2 cut(s) 518, 519
SduI GDGCHC 2 cut(s) 366, 706
SetI ASST 5 cut(s) 219, 399, 590, 711, 719
SfaNI GCATC 1 cut(s) 553
SfcI CTRYAG 1 cut(s) 710
SfoI GGCGCC 1 cut(s) 372
SinI GGWCC 2 cut(s) 154, 256
SmaI CCCGGG 1 cut(s) 519
Sse9I AATT 4 cut(s) 221, 304, 441, 635
SsiI CCGC 4 cut(s) 11, 64, 619, 775
SspDI GGCGCC 1 cut(s) 370
SspMI CTAG 1 cut(s) 125
StyD4I CCNGG 2 cut(s) 516, 517
StyI CCWWGG 1 cut(s) 458
TaaI ACNGT 3 cut(s) 118, 581, 595
TaiI ACGT 1 cut(s) 219
TaqI TCGA 3 cut(s) 146, 288, 297
TasI AATT 4 cut(s) 221, 304, 441, 635
TatI WGTACW 1 cut(s) 342
TauI GCSGC 2 cut(s) 14, 66
TfiI GAWTC 4 cut(s) 285, 290, 454, 548
Tru1I TTAA 1 cut(s) 495
Tru9I TTAA 1 cut(s) 495
TscAI CASTG 1 cut(s) 211
TseI GCWGC 3 cut(s) 209, 394, 791
TspDTI ATGAA 3 cut(s) 152, 648, 800
TspMI CCCGGG 1 cut(s) 517
TspRI CASTG 1 cut(s) 211
VneI GTGCAC 1 cut(s) 702
VpaK11BI GGWCC 2 cut(s) 154, 256
XapI RAATTY 3 cut(s) 221, 304, 635
XmaI CCCGGG 1 cut(s) 517
XmiI GTMKAC 2 cut(s) 146, 321
XmnI GAANNNNTTC 2 cut(s) 289, 684
XspI CTAG 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.