Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0006279

Physical Location & Seq

Genomic Coordinates Forward (+)

985434 .. 990845

Gene Structure 5412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G021000.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3114 bp

ATGGAGTTCGAGAAAAGAAAAGCGGCGACGCTTGCGTCACTGCGGTCAGAGGAGACAGACAAATCACCGAAAGGTACGGTGGACGCCCCCATCATACCTCTCCTCAACACCCTCAACAGCCACCCAAATTACTTCACCACCAGTTCCTGCTCCGGCCGTATCTCTATCCTCTCCCAACCCACACACTCAAAACTCAAGACGAAGAAGAAAGCCTTGGGTGGCACGTGGCTCTTCATCACCCACGACCCGGCCGATCCCGACTCAGTCCTCAACCGCCTCTTCCGTTCCGACTCAACTAGCAAAGACGAACAGGACAACCAAAACGACCTTGTTTTTAGATTCGAGCCTCTTATCATAGCTGTTGAGTGCAAGGACTTGGCTTCGGCTCAGTCTTTGGTTTCAAAGGCAATAGCTTGTGGGTTCAGAGAGTCTGGCATTACGAATTCGAGCAAACGCGTGATTATCGCGATACGTTGTTCGATACGGTTGGAAGTGCCGCTGGGGAGTAGTCACGAGATTATGGTATCGTGCGAGTATGTCAGGTTCCTTGTTGGGGTGGCAAACGAGAAAATGGAGGCCAACAGGAAGCGGACTGAAGCATTTTTCCTGGCTTTGCAGAGTGAGAGTGGGGGATTTTTGGGTCCGACTCCTGCGAATGGTGGGACTCTAGCAGATGGGGAGGCTGAGTTGGAAGCGAGAGATGACAATGCCCATTCTGATTCTGGGTCCGTGGAAGTTCCTGGTTGTAGTCTGTCTGTGGTTGAGATGGCAATTTCTGGTGAACCCGAAGAGAATCTTTTCCTTTGGGGTCATTCTGCTTGTGCATTAGAAGCCAAAAACCAAAATGGTGTTCTTGTGTTTGGTGGCTTTGGAGGCATAGGAAGGCATGGAAGAAGAAATCATTCTTGGCTGGTTGATCCTTTTTCTGGCACTGTGAAAGCAATTAATGTAGAGAGCAGCCCGTCCCCGCGATTGGGTCACACATCTTCTTTGGTTGGAGATTGTGTGTTTGTTATTGGAGGCAGGTCTGACCCTGAGAAAATTTTGAATGATGTCTGGGTCCTCAATACATCAAAGAAGGAATGGAAGTTCTTAGAATGTTCTGGGGACGTATTTCCTCCCAGGCATCGGCATGCTGCAGCAGTTGTAGGCTCAAAGATATATGTGTTTGGTGGACTTAACAATGATACAATCACTTCTTCCTTGCATGTCCTCGATACAGATAATCTGCAGTGGAAAGAGTTGTTTGTCAGTGGGGAACACCCATGCGCCCGACATTCTCACTCAATGGTGGCATGTGGATCTCAACTATATATATTTGGAGGATATAATGGTGAGCAAACACTTGGAGACTTGTACGTTTATAATATTCAAACATGTAAATGGAAGAAGGAGAAGGCGGCTGGGAGAAGTCCACATGCAAGGTTCTCCCACTCAATGTTTGTATACAGGAATTATCTTGGAGTTATTGGTGGTTGTCCAGTTAGACAACATTGTCAAGAGTTGGCAATACTTGACTTGAAGCAAAGTGTGTGGAGGCATGCGAAACTTGAATCTACTAGTGAAGATTTGTTTGTGCGCAGCACAGCTAATATTGTTGGTGATGATCTTGTTATGATTGGTGGTGGCGCATCTTGTTATGCATTTGGAACAAAGTTTAGTAAGCCTGTGAAAATCAACCTGCTTCCCCTGATGAGTATAGATAATAATATTAAACCAGTTGTCAGAGAAAGGGATGCTCACCGTTATGAAATGGTTAATAGTGAGAAAAGCGGACGATTCCAAGATCCACAGGCTGAAGATGCGCAAAGCTTAACTGAAGCTCTTGATCTGAATTTTGAGAGTGACTTTCCTGGGGAAAATGGCATAGGTCATCAGGTAGAGTCGTATTGGATTCTACAACTCGAAAGAAAATATGCAAAAGTAGGCAAGGACATATTGAAAAAGTTTGGATGGTTAGATCTTGGAAGGAAGGTTTACTCCAGGAAAGGTGGTTTACATATTTGTTTTCCAGTAAACGGAAAATTTTCAGGTGTGTTTAAAGAAAATAAGCGTCCTTTGACAGATTTATCTGAAGGAGAGAGTGATCACTTTGTTAAACCAGTAATCGGGGAAGAATGTTTATTGAATGCAGTCACGTGTTCAAAAGCCTTGGACATTCTAAAGGAATGTGGTGCTACTAAGCTGGCAGATGAAGTCCTTGAAGTCAGGAGAGCTGCCAAATCTCCCTTGAAAGTAATGAATGAAGCTGTGGGCTCTCTGATAAAGGATAAAGGACTACCTGAAGAACTCTTAGAGGAGCTGCCAGCAAGATGGGAGCAACTTGGAGATATTGTTGTGCTTCCGGCAACATCATTCAAGAATCCATTATGGGACTCAATGCGGGAGGAGCTTTGGCCTGTTATTGCCAAATCAGTTAATGCTCATCGCCTTGCACGCCAAGGCCGAGTTGCATCAAACGGTACAAGGGACAGTACTTTGGAGATTCTTCTGGGAGATAATGGATGGGTTGATCATCGCGAAAATGGCATTCTCTATTCTTTTGATGCTACTAAGTGTATGTTCTCCTGGGGCAACCTTTCTGAGAAGCTTCGCGTGGCCTCTCTGAATTGCAGAGATGAGATTGTTGTGGATTTGTTTGCTGGAATTGGTTATTTTGTTCTGCCATTTCTTGTCAGGGCCAACGCGAAACTAGTTTATGCTTGTGAATGGAATCCCCATGCTGTTGAGGCACTGCGGCGAAATCTGCAAGCCAATTCAGTGAGTGATCGGTGTATCATTCTTGAAGGAGATAACCGGACAGTGGCACCTAAAGGAGTGGCTGATCGGGTCTGTCTCGGTCTCATTCCAACAAGTGCGGGTAGCTGGGTCACTGCTGTTAGGGCATTAAGGAGTGAGGGCGGGATGCTACATGTGCATGGTAATGTCAAGGACTCGGAGGAGAGTTTATGGACTAAACATGTATCAGAATCAGTAGGTGAAATTGCTAAATCTGAAGGTCATTGTTGGGAAGTTTCAATAGAACATTTGGAGAGAGTGAAATGGTATGCCCCACATATCCGTCATCTTGTTGCAGATGTAAGATGTAGACAGAGCCAGAGATGGCCAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0031590 GO:0031591 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901135 GO:1901137 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kelch_1 Kelch_3 Kelch_4 Kelch_5 Kelch_6 Met_10 TYW3

Protein Analysis

1038

Amino Acids

114.65

Weight (kDa)

6.58

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006279)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04670
fragaria_vesca	FvH4_3g02080 FvH4_3g02080 FvH4_3g02080 FvH4_3g02080 FvH4_3g02080 FvH4_3g02080
malus_domestica	MD10G1321300.v1.1
prunus_persica	Prupe.4G021000_v2.0.a1 Prupe.4G021000_v2.0.a1 Prupe.4G021000_v2.0.a1 Prupe.4G021000_v2.0.a1 Prupe.4G021000_v2.0.a1
pyrus_communis	pycom10g27200
rosa_chinensis	RchiOBHm_Chr5g0003171
rosa_laevigata	RLG00000031082
rosa_multiflora	Rmu_sc0012288.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072840
rosa_rugosa	Rorug04G0401000 Rorug04G0401100
rosa_samantha	Rh5AG025900 Rh5BG027100 Rh5CG028700 Rh5DG025500
rosa_wichuraiana	Rw0G010910 Rw5G002390 Rw5G002400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1365
AasI	GACNNNNNNGTC	2 cut(s)	34, 1494
Acc16I	TGCGCA	2 cut(s)	1580, 1806
Acc36I	ACCTGC	2 cut(s)	1014, 1689
AccB1I	GGYRCC	1 cut(s)	2806
AccI	GTMKAC	2 cut(s)	1446, 3088
AccII	CGCG	6 cut(s)	456, 467, 970, 2520, 2595, 2687
AclWI	GGATC	4 cut(s)	248, 911, 1309, 1781
AcoI	YGGCCR	3 cut(s)	154, 249, 3104
AcsI	RAATTY	4 cut(s)	442, 1041, 1834, 2024
AcuI	CTGAAG	6 cut(s)	615, 1818, 1839, 2094, 2304, 3015
AcvI	CACGTG	2 cut(s)	225, 2139
AcyI	GRCGYC	1 cut(s)	84
AfaI	GTAC	4 cut(s)	76, 1358, 2464, 2476
AflIII	ACRYGT	5 cut(s)	454, 1376, 2138, 2911, 2959
AhlI	ACTAGT	2 cut(s)	1559, 2692
AjnI	CCWGG	6 cut(s)	606, 739, 1121, 1852, 1982, 2567
AjuI	GAANNNNNNNTTGG	6 cut(s)	197, 229, 834, 866, 889, 921
AloI	GAACNNNNNNTCC	2 cut(s)	1073, 1105
Alw26I	GTCTC	4 cut(s)	47, 1344, 2840, 2846
AlwI	GGATC	4 cut(s)	248, 911, 1309, 1781
AlwNI	CAGNNNCTG	1 cut(s)	147
AoxI	GGCC	8 cut(s)	154, 249, 576, 2396, 2443, 2598, 2679, 3104
ApeKI	GCWGC	6 cut(s)	957, 1136, 1139, 1581, 2216, 2302
ApoI	RAATTY	4 cut(s)	442, 1041, 1834, 2024
AseI	ATTAAT	1 cut(s)	945
Asp700I	GAANNNNTTC	3 cut(s)	797, 901, 2026
AspLEI	GCGC	4 cut(s)	1271, 1581, 1631, 1807
AspS9I	GGNCC	4 cut(s)	641, 726, 1060, 2679
AsuC2I	CCSGG	1 cut(s)	248
AsuHPI	GGTGA	8 cut(s)	57, 127, 229, 791, 1346, 1613, 1733, 2990
AvaII	GGWCC	3 cut(s)	641, 726, 1060
BalI	TGGCCA	1 cut(s)	3106
BanI	GGYRCC	1 cut(s)	2806
BanII	GRGCYC	1 cut(s)	2258
BauI	CACGAG	1 cut(s)	512
BbrPI	CACGTG	2 cut(s)	225, 2139
BbvI	GCAGC	6 cut(s)	969, 1123, 1151, 1593, 2203, 2289
BccI	CCATC	7 cut(s)	98, 668, 760, 1947, 2307, 2499, 3096
BceAI	ACGGC	1 cut(s)	141
BciT130I	CCWGG	6 cut(s)	608, 741, 1123, 1854, 1984, 2569
BclI	TGATCA	2 cut(s)	2086, 2512
BcnI	CCSGG	1 cut(s)	248
BcoDI	GTCTC	4 cut(s)	47, 1344, 2840, 2846
BcuI	ACTAGT	2 cut(s)	1559, 2692
BfaI	CTAG	4 cut(s)	297, 668, 1560, 2693
BfmI	CTRYAG	2 cut(s)	1137, 1229
BfuAI	ACCTGC	2 cut(s)	1014, 1689
BglII	AGATCT	1 cut(s)	1960
BmcAI	AGTACT	1 cut(s)	2476
Bme1390I	CCNGG	7 cut(s)	248, 608, 741, 1123, 1854, 1984, 2569
Bme18I	GGWCC	3 cut(s)	641, 726, 1060
BmgT120I	GGNCC	4 cut(s)	641, 726, 1060, 2679
BmiI	GGNNCC	5 cut(s)	545, 642, 727, 1061, 2808
BmrFI	CCNGG	7 cut(s)	248, 608, 741, 1123, 1854, 1984, 2569
BmsI	GCATC	7 cut(s)	1135, 1640, 1726, 1792, 2462, 2536, 2895
BpmI	CTGGAG	1 cut(s)	1966
BpuEI	CTTGAG	1 cut(s)	179
BpuMI	CCSGG	1 cut(s)	248
BsaAI	YACGTR	2 cut(s)	225, 2139
BsaHI	GRCGYC	1 cut(s)	84
BsaI	GGTCTC	1 cut(s)	2846
BsaJI	CCNNGG	7 cut(s)	213, 729, 1121, 1853, 2151, 2440, 2568
BsaWI	WCCGGW	1 cut(s)	2796
BsaXI	ACNNNNNCTCC	6 cut(s)	671, 701, 990, 1020, 2319, 2349
Bse1I	ACTGG	5 cut(s)	141, 1481, 1718, 2012, 2102
BseBI	CCWGG	6 cut(s)	608, 741, 1123, 1854, 1984, 2569
BseDI	CCNNGG	7 cut(s)	213, 729, 1121, 1853, 2151, 2440, 2568
BseGI	GGATG	4 cut(s)	1741, 1958, 2510, 2910
BseMII	CTCAG	5 cut(s)	276, 401, 675, 1026, 2574
BseNI	ACTGG	5 cut(s)	141, 1481, 1718, 2012, 2102
BseRI	GAGGAG	5 cut(s)	65, 92, 2312, 2402, 2954
BseX3I	CGGCCG	2 cut(s)	154, 249
BseXI	GCAGC	6 cut(s)	969, 1123, 1151, 1593, 2203, 2289
BseYI	CCCAGC	3 cut(s)	499, 1403, 2865
Bsh1236I	CGCG	6 cut(s)	456, 467, 970, 2520, 2595, 2687
Bsh1285I	CGRYCG	2 cut(s)	157, 252
BshFI	GGCC	8 cut(s)	156, 251, 578, 2398, 2445, 2600, 2681, 3106
BshNI	GGYRCC	1 cut(s)	2806
BsiEI	CGRYCG	2 cut(s)	157, 252
BsiSI	CCGG	4 cut(s)	153, 248, 2345, 2797
BslFI	GGGAC	5 cut(s)	676, 949, 1121, 2387, 2483
BsmAI	GTCTC	4 cut(s)	47, 1344, 2840, 2846
BsmFI	GGGAC	5 cut(s)	676, 949, 1121, 2387, 2483
BsmI	GAATGC	2 cut(s)	2134, 2529
BsnI	GGCC	8 cut(s)	156, 251, 578, 2398, 2445, 2600, 2681, 3106
Bso31I	GGTCTC	1 cut(s)	2846
Bsp1286I	GDGCHC	1 cut(s)	2258
Bsp68I	TCGCGA	2 cut(s)	467, 2520
BspANI	GGCC	8 cut(s)	156, 251, 578, 2398, 2445, 2600, 2681, 3106
BspCNI	CTCAG	5 cut(s)	275, 400, 676, 1027, 2575
BspFNI	CGCG	6 cut(s)	456, 467, 970, 2520, 2595, 2687
BspLI	GGNNCC	5 cut(s)	545, 642, 727, 1061, 2808
BspMAI	CTGCAG	2 cut(s)	1141, 1233
BspMI	ACCTGC	2 cut(s)	1014, 1689
BspPI	GGATC	4 cut(s)	248, 911, 1309, 1781
BspQI	GCTCTTC	1 cut(s)	236
BspT107I	GGYRCC	1 cut(s)	2806
BspTNI	GGTCTC	1 cut(s)	2846
BsrI	ACTGG	5 cut(s)	141, 1481, 1718, 2012, 2102
BssECI	CCNNGG	7 cut(s)	213, 729, 1121, 1853, 2151, 2440, 2568
BssNAI	GTATAC	1 cut(s)	1447
BssNI	GRCGYC	1 cut(s)	84
BssSI	CACGAG	1 cut(s)	512
BssT1I	CCWWGG	3 cut(s)	213, 2151, 2440
Bst1107I	GTATAC	1 cut(s)	1447
Bst2BI	CACGAG	1 cut(s)	512
Bst2UI	CCWGG	6 cut(s)	608, 741, 1123, 1854, 1984, 2569
Bst4CI	ACNGT	7 cut(s)	79, 486, 934, 1745, 2462, 2474, 2803
Bst6I	CTCTTC	3 cut(s)	236, 284, 783
BstACI	GRCGYC	1 cut(s)	84
BstBAI	YACGTR	2 cut(s)	225, 2139
BstC8I	GCNNGC	7 cut(s)	33, 1134, 1542, 2187, 2307, 2437, 2751
BstDEI	CTNAG	9 cut(s)	262, 387, 684, 1035, 1093, 2181, 2293, 2553, 2583
BstDSI	CCRYGG	1 cut(s)	729
BstF5I	GGATG	4 cut(s)	1741, 1958, 2510, 2910
BstFNI	CGCG	6 cut(s)	456, 467, 970, 2520, 2595, 2687
BstHHI	GCGC	4 cut(s)	1271, 1581, 1631, 1807
BstMAI	GTCTC	4 cut(s)	47, 1344, 2840, 2846
BstMCI	CGRYCG	2 cut(s)	157, 252
BstNI	CCWGG	6 cut(s)	608, 741, 1123, 1854, 1984, 2569
BstNSI	RCATGY	8 cut(s)	1136, 1211, 1299, 1380, 1421, 1544, 2915, 2963
BstSCI	CCNGG	7 cut(s)	246, 606, 739, 1121, 1852, 1982, 2567
BstSFI	CTRYAG	2 cut(s)	1137, 1229
BstUI	CGCG	6 cut(s)	456, 467, 970, 2520, 2595, 2687
BstV1I	GCAGC	6 cut(s)	969, 1123, 1151, 1593, 2203, 2289
BstX2I	RGATCY	3 cut(s)	1301, 1786, 1960
BstXI	CCANNNNNNTGG	1 cut(s)	2313
BstYI	RGATCY	3 cut(s)	1301, 1786, 1960
BstZ17I	GTATAC	1 cut(s)	1447
BstZI	CGGCCG	2 cut(s)	154, 249
BsuRI	GGCC	8 cut(s)	156, 251, 578, 2398, 2445, 2600, 2681, 3106
BtgI	CCRYGG	1 cut(s)	729
BtgZI	GCGATG	2 cut(s)	2411, 2501
BtsCI	GGATG	4 cut(s)	1741, 1958, 2510, 2910
BtsI	GCAGTG	4 cut(s)	38, 1238, 2732, 2871
BtsIMutI	CAGTG	8 cut(s)	38, 930, 1238, 1258, 2732, 2766, 2808, 2871
BtuMI	TCGCGA	2 cut(s)	467, 2520
BveI	ACCTGC	2 cut(s)	1014, 1689
Cac8I	GCNNGC	7 cut(s)	33, 1134, 1542, 2187, 2307, 2437, 2751
CaiI	CAGNNNCTG	1 cut(s)	147
CfoI	GCGC	4 cut(s)	1271, 1581, 1631, 1807
Cfr13I	GGNCC	4 cut(s)	641, 726, 1060, 2679
CseI	GACGC	4 cut(s)	24, 37, 92, 2042
Csp6I	GTAC	4 cut(s)	75, 1357, 2463, 2475
CspCI	CAANNNNNGTGG	2 cut(s)	1514, 1549
CviQI	GTAC	4 cut(s)	75, 1357, 2463, 2475
DdeI	CTNAG	9 cut(s)	262, 387, 684, 1035, 1093, 2181, 2293, 2553, 2583
DraI	TTTAAA	1 cut(s)	2041
DrdI	GACNNNNNNGTC	2 cut(s)	34, 1494
DseDI	GACNNNNNNGTC	2 cut(s)	34, 1494
EaeI	YGGCCR	3 cut(s)	154, 249, 3104
EagI	CGGCCG	2 cut(s)	154, 249
Eam1104I	CTCTTC	3 cut(s)	236, 284, 783
EarI	CTCTTC	3 cut(s)	236, 284, 783
EclXI	CGGCCG	2 cut(s)	154, 249
Eco130I	CCWWGG	3 cut(s)	213, 2151, 2440
Eco24I	GRGCYC	1 cut(s)	2258
Eco31I	GGTCTC	1 cut(s)	2846
Eco47I	GGWCC	3 cut(s)	641, 726, 1060
Eco52I	CGGCCG	2 cut(s)	154, 249
Eco57I	CTGAAG	6 cut(s)	615, 1818, 1839, 2094, 2304, 3015
Eco72I	CACGTG	2 cut(s)	225, 2139
EcoO109I	RGGNCCY	1 cut(s)	1060
EcoRI	GAATTC	1 cut(s)	442
EcoRII	CCWGG	6 cut(s)	606, 739, 1121, 1852, 1982, 2567
EcoT14I	CCWWGG	3 cut(s)	213, 2151, 2440
EcoT22I	ATGCAT	1 cut(s)	1645
EcoT38I	GRGCYC	1 cut(s)	2258
ErhI	CCWWGG	3 cut(s)	213, 2151, 2440
FalI	AAGNNNNNCTT	4 cut(s)	197, 229, 780, 812
FaqI	GGGAC	5 cut(s)	676, 949, 1121, 2387, 2483
FauI	CCCGC	4 cut(s)	975, 2376, 2851, 2894
FbaI	TGATCA	2 cut(s)	2086, 2512
FblI	GTMKAC	2 cut(s)	1446, 3088
FokI	GGATG	4 cut(s)	1748, 1965, 2517, 2917
FriOI	GRGCYC	1 cut(s)	2258
FspBI	CTAG	4 cut(s)	297, 668, 1560, 2693
FspI	TGCGCA	2 cut(s)	1580, 1806
GlaI	GCGC	4 cut(s)	1270, 1580, 1630, 1806
GsaI	CCCAGC	3 cut(s)	503, 1407, 2869
GsuI	CTGGAG	1 cut(s)	1966
HaeIII	GGCC	8 cut(s)	156, 251, 578, 2398, 2445, 2600, 2681, 3106
HapII	CCGG	4 cut(s)	153, 248, 2345, 2797
HgaI	GACGC	4 cut(s)	24, 37, 92, 2042
HhaI	GCGC	4 cut(s)	1271, 1581, 1631, 1807
Hin1I	GRCGYC	1 cut(s)	84
Hin6I	GCGC	4 cut(s)	1269, 1579, 1629, 1805
HinP1I	GCGC	4 cut(s)	1269, 1579, 1629, 1805
HindIII	AAGCTT	2 cut(s)	1810, 2588
HpaII	CCGG	4 cut(s)	153, 248, 2345, 2797
HphI	GGTGA	8 cut(s)	57, 127, 229, 791, 1346, 1613, 1733, 2990
Hpy166II	GTNNAC	9 cut(s)	82, 782, 1175, 1415, 1447, 1978, 1997, 2017, 3089
Hpy8I	GTNNAC	9 cut(s)	82, 782, 1175, 1415, 1447, 1978, 1997, 2017, 3089
Hpy99I	CGWCG	1 cut(s)	31
HpyAV	CCTTC	9 cut(s)	876, 1072, 1384, 1390, 1962, 1966, 2069, 2780, 2990
HpyCH4III	ACNGT	7 cut(s)	79, 486, 934, 1745, 2462, 2474, 2803
HpyCH4IV	ACGT	5 cut(s)	224, 472, 1110, 1359, 2138
HpyF3I	CTNAG	9 cut(s)	262, 387, 684, 1035, 1093, 2181, 2293, 2553, 2583
HpySE526I	ACGT	5 cut(s)	224, 472, 1110, 1359, 2138
Hsp92I	GRCGYC	1 cut(s)	84
HspAI	GCGC	4 cut(s)	1269, 1579, 1629, 1805
Ksp22I	TGATCA	2 cut(s)	2086, 2512
LguI	GCTCTTC	1 cut(s)	236
LmnI	GCTCC	4 cut(s)	155, 2299, 2317, 2389
Lsp1109I	GCAGC	6 cut(s)	969, 1123, 1151, 1593, 2203, 2289
LweI	GCATC	7 cut(s)	1135, 1640, 1726, 1792, 2462, 2536, 2895
MaeI	CTAG	4 cut(s)	297, 668, 1560, 2693
MaeII	ACGT	5 cut(s)	224, 472, 1110, 1359, 2138
MaeIII	GTNAC	6 cut(s)	36, 509, 977, 1844, 2134, 2869
MflI	RGATCY	3 cut(s)	1301, 1786, 1960
MhlI	GDGCHC	1 cut(s)	2258
MlsI	TGGCCA	1 cut(s)	3106
MluI	ACGCGT	1 cut(s)	454
MluNI	TGGCCA	1 cut(s)	3106
MlyI	GAGTC	8 cut(s)	254, 284, 437, 640, 658, 1892, 2369, 2927
MmeI	TCCRAC	6 cut(s)	312, 468, 668, 669, 976, 2873
Mox20I	TGGCCA	1 cut(s)	3106
Mph1103I	ATGCAT	1 cut(s)	1645
MroXI	GAANNNNTTC	3 cut(s)	797, 901, 2026
MscI	TGGCCA	1 cut(s)	3106
MslI	CAYNNNNRTG	5 cut(s)	1131, 1381, 1746, 2916, 2922
Msp20I	TGGCCA	1 cut(s)	3106
MspA1I	CMGCKG	1 cut(s)	499
MspI	CCGG	4 cut(s)	153, 248, 2345, 2797
MspR9I	CCNGG	7 cut(s)	248, 608, 741, 1123, 1854, 1984, 2569
Mva1269I	GAATGC	2 cut(s)	2134, 2529
MvaI	CCWGG	6 cut(s)	608, 741, 1123, 1854, 1984, 2569
MvnI	CGCG	6 cut(s)	456, 467, 970, 2520, 2595, 2687
NciI	CCSGG	1 cut(s)	248
NlaIV	GGNNCC	5 cut(s)	545, 642, 727, 1061, 2808
NmeAIII	GCCGAG	1 cut(s)	2471
NmuCI	GTSAC	6 cut(s)	36, 509, 977, 1844, 2134, 2869
NruI	TCGCGA	2 cut(s)	467, 2520
NsbI	TGCGCA	2 cut(s)	1580, 1806
NsiI	ATGCAT	1 cut(s)	1645
NspI	RCATGY	8 cut(s)	1136, 1211, 1299, 1380, 1421, 1544, 2915, 2963
PaeI	GCATGC	2 cut(s)	1136, 1544
PciI	ACATGT	3 cut(s)	1376, 2911, 2959
PciSI	GCTCTTC	1 cut(s)	236
PcsI	WCGNNNNNNNCGW	2 cut(s)	249, 2443
PctI	GAATGC	2 cut(s)	2134, 2529
PdmI	GAANNNNTTC	3 cut(s)	797, 901, 2026
PflFI	GACNNNGTC	1 cut(s)	263
PfoI	TCCNGGA	1 cut(s)	1982
PleI	GAGTC	8 cut(s)	254, 284, 436, 640, 658, 1891, 2369, 2927
PmaCI	CACGTG	2 cut(s)	225, 2139
PmlI	CACGTG	2 cut(s)	225, 2139
PpsI	GAGTC	8 cut(s)	254, 284, 436, 640, 658, 1891, 2369, 2927
Ppu21I	YACGTR	2 cut(s)	225, 2139
PpuMI	RGGWCCY	1 cut(s)	1060
PscI	ACATGT	3 cut(s)	1376, 2911, 2959
PshBI	ATTAAT	1 cut(s)	945
PsiI	TTATAA	1 cut(s)	1365
Psp5II	RGGWCCY	1 cut(s)	1060
Psp6I	CCWGG	6 cut(s)	606, 739, 1121, 1852, 1982, 2567
PspCI	CACGTG	2 cut(s)	225, 2139
PspFI	CCCAGC	3 cut(s)	499, 1403, 2865
PspGI	CCWGG	6 cut(s)	606, 739, 1121, 1852, 1982, 2567
PspN4I	GGNNCC	5 cut(s)	545, 642, 727, 1061, 2808
PspPI	GGNCC	4 cut(s)	641, 726, 1060, 2679
PspPPI	RGGWCCY	1 cut(s)	1060
PsrI	GAACNNNNNNTAC	2 cut(s)	527, 559
PstI	CTGCAG	2 cut(s)	1141, 1233
PstNI	CAGNNNCTG	1 cut(s)	147
PsuI	RGATCY	3 cut(s)	1301, 1786, 1960
PsyI	GACNNNGTC	1 cut(s)	263
RruI	TCGCGA	2 cut(s)	467, 2520
RsaI	GTAC	4 cut(s)	76, 1358, 2464, 2476
RsaNI	GTAC	4 cut(s)	75, 1357, 2463, 2475
RseI	CAYNNNNRTG	5 cut(s)	1131, 1381, 1746, 2916, 2922
SapI	GCTCTTC	1 cut(s)	236
Sau96I	GGNCC	4 cut(s)	641, 726, 1060, 2679
ScaI	AGTACT	1 cut(s)	2476
SchI	GAGTC	8 cut(s)	254, 284, 437, 640, 658, 1892, 2369, 2927
ScrFI	CCNGG	7 cut(s)	248, 608, 741, 1123, 1854, 1984, 2569
SduI	GDGCHC	1 cut(s)	2258
SfaNI	GCATC	7 cut(s)	1135, 1640, 1726, 1792, 2462, 2536, 2895
SfcI	CTRYAG	2 cut(s)	1137, 1229
SinI	GGWCC	3 cut(s)	641, 726, 1060
SmiMI	CAYNNNNRTG	5 cut(s)	1131, 1381, 1746, 2916, 2922
SmlI	CTYRAG	1 cut(s)	194
SmoI	CTYRAG	1 cut(s)	194
SpeI	ACTAGT	2 cut(s)	1559, 2692
SphI	GCATGC	2 cut(s)	1136, 1544
SspI	AATATT	3 cut(s)	1369, 1594, 1711
SspMI	CTAG	4 cut(s)	297, 668, 1560, 2693
StyD4I	CCNGG	7 cut(s)	246, 606, 739, 1121, 1852, 1982, 2567
StyI	CCWWGG	3 cut(s)	213, 2151, 2440
TaaI	ACNGT	7 cut(s)	79, 486, 934, 1745, 2462, 2474, 2803
TaiI	ACGT	5 cut(s)	227, 475, 1113, 1362, 2141
TaqI	TCGA	6 cut(s)	9, 342, 446, 479, 1215, 1905
TaqII	GACCGA	1 cut(s)	2828
TatI	WGTACW	1 cut(s)	2474
TauI	GCSGC	4 cut(s)	26, 499, 1403, 2740
TscAI	CASTG	8 cut(s)	45, 937, 1238, 1258, 2739, 2766, 2808, 2878
TseFI	GTSAC	6 cut(s)	36, 509, 977, 1844, 2134, 2869
TseI	GCWGC	6 cut(s)	957, 1136, 1139, 1581, 2216, 2302
Tsp45I	GTSAC	6 cut(s)	36, 509, 977, 1844, 2134, 2869
TspDTI	ATGAA	5 cut(s)	223, 1764, 2208, 2255, 2259
TspGWI	ACGGA	4 cut(s)	272, 718, 2034, 3050
TspRI	CASTG	8 cut(s)	45, 937, 1238, 1258, 2739, 2766, 2808, 2878
Tth111I	GACNNNGTC	1 cut(s)	263
VpaK11BI	GGWCC	3 cut(s)	641, 726, 1060
VspI	ATTAAT	1 cut(s)	945
XapI	RAATTY	4 cut(s)	442, 1041, 1834, 2024
XceI	RCATGY	8 cut(s)	1136, 1211, 1299, 1380, 1421, 1544, 2915, 2963
XcmI	CCANNNNNNNNNTGG	1 cut(s)	719
XmiI	GTMKAC	2 cut(s)	1446, 3088
XmnI	GAANNNNTTC	3 cut(s)	797, 901, 2026
XspI	CTAG	4 cut(s)	297, 668, 1560, 2693
ZrmI	AGTACT	1 cut(s)	2476
Zsp2I	ATGCAT	1 cut(s)	1645

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.