Prupe.4G229800_v2.0.a1

Beta-(1,2)-xylosyltransferase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
14726254 .. 14730409
4156 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G229800.1

Sequence Viewer

Length: 1548 bp
ATGAACAATAGGAACTTGTTACTGCTGAAGATCCTTCTGTTTCTCTTTGCCTTAAACTCTCTCTCTCTCTGCCTCTACTTCACTTCTCACTCCAGAACATTAACTCCAAGCCAAACCGACACCCAAGCCCGCCATTCTTTGTCCCTGAACCGCCTCCCCTTAACAGATCAAAATCGCCACCCGTACCGCTATTCGAAGCCATGGCCTATTTTGCCCTCTTACCTCCCTTGGTCTCAGACAACCCAAGTTCCCTTTCGCTCCTGCGAGGCCTATTTTGGCAATGGGTTCACTAACAGAGTCGATCTCTTAAAGCCCAAGAAGGATTTGACCTTGAATCGCATGGGTTGGTTCAAGTGCTGGTTCAGTGAGACCTTGAGAAGCTCAGTATGTGAAGGAGGGGGGCTCAGAATGGACCCAGGGAAGATTAAAATGTCAAGAGGTGGTGAGATTTTGGAGGAGGTCATTGGGAGAGGAGAGGAAGAGGAGCTGCCTGAGTTCCAAACCGGTGCCTTTCAGATAGACGGAGGAGATGGGATTAGTGGAGAGGATCAAAGGCTTGTGACCCAAGAGTTTCTTGATGAGTATGTGCCTCATGGTGAGATTGTGAAACACACCATGAGAGAATTGATTGGGTCTGTTCGGATCGTGCCCACCACAGAGCTTCAGTGCAATGAGTGGATTGAGGAGCCAACACTTCTGGTGACACGCTTTGAGTATGCAAATCTTTTCCACACATTCACGGATTGGTATAGCGCTTATGTAGCTTCAAGAGTCACTGGCTTACCTAATCGACCTCATTTAGTCTTTGTAGATGGACACTGTAGGGCATCTCTGGAAGAAACATGGAAAGCATTATTTTCTAGCCTTAGATATGCTAAAAACTTTAGTGGTCCAGTTTGTTTTCGTCATCTTATTCTCTCACCTTTGGGATATGAGACTCCACTATTTAAGGGGCTGAATGAAGATATAAATTGTCATGGTGCATCTGCACCCGACCTGTGGCAACACCCTGATGACCAGAAAACTGCGCGATTATCAGAGTTCGGTGAAATGATTAAAGCCGCTTTTGGATTTCCAGTGCATAGACATCGTATTGAGAAGCCAGCCTCAGGTCATAATGTCCTTTTTGTTCGACGTGAAGATTATCTAGCCCATCCACGTCATCATGGTAAAGTTGAGTCGAGGCTAAGTAATGAACAAGAAGTGTTTGATGCCTTAAAGAGCTGGGTATCTAATCATAAGGAATGCAAAATAAACCTTGTGAATGGACTGTTTGCACACATGTCCATGAAAGAGCAAGTCCGGGCCATTCAAGATGCTTCTGTTATTATTGGTGCTCATGGTGCAGGTCTCACACACATAGTATCTGCAATGCCAAAAACCGTGATTCTGGAGATTATTAGTAGTCAATATAGACGGCCACATTTTGCATTAATTGCCCGGTGGAAAGGGTTGGAATATCATGCCATTAATCTTGAGGGGTCATTTGCCAGTCCACCAGTTGTTATTGACAAGCTTAACAACATAATGAGAAGTCTTGGGTGCTGA

Protein Analysis

516

Amino Acids

58.66

Weight (kDa)

7.69

Isoelectric Point (pI)

43.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1337
AccB1I GGYRCC 1 cut(s) 506
AccII CGCG 1 cut(s) 1030
AciI CCGC 4 cut(s) 130, 151, 187, 1062
AclWI GGATC 3 cut(s) 25, 555, 650
AcoI YGGCCR 1 cut(s) 1418
AcuI CTGAAG 2 cut(s) 47, 647
AfaI GTAC 1 cut(s) 185
AfeI AGCGCT 1 cut(s) 754
AfiI CCNNNNNNNGG 2 cut(s) 999, 1109
AflIII ACRYGT 1 cut(s) 1281
AgeI ACCGGT 1 cut(s) 503
AgsI TTSAA 4 cut(s) 334, 352, 768, 1313
AjiI CACGTC 2 cut(s) 1136, 1160
AjnI CCWGG 1 cut(s) 415
AjuI GAANNNNNNNTTGG 2 cut(s) 237, 269
AloI GAACNNNNNNTCC 2 cut(s) 88, 120
AluBI AGCT 6 cut(s) 381, 487, 661, 764, 1224, 1516
AluI AGCT 6 cut(s) 381, 487, 661, 764, 1224, 1516
Alw21I GWGCWC 1 cut(s) 1339
Alw26I GTCTC 4 cut(s) 237, 362, 929, 1355
AlwI GGATC 3 cut(s) 25, 555, 650
Aor51HI AGCGCT 1 cut(s) 754
AoxI GGCC 4 cut(s) 203, 267, 1305, 1418
ApeKI GCWGC 1 cut(s) 487
AseI ATTAAT 2 cut(s) 1433, 1470
AsiGI ACCGGT 1 cut(s) 503
AspLEI GCGC 2 cut(s) 755, 1030
AspS9I GGNCC 3 cut(s) 412, 890, 1305
AsuC2I CCSGG 2 cut(s) 1304, 1441
AsuHPI GGTGA 5 cut(s) 455, 608, 712, 912, 1058
AsuII TTCGAA 1 cut(s) 194
AvaII GGWCC 2 cut(s) 412, 890
AxyI CCTNAGG 1 cut(s) 1108
BaeGI GKGCMC 1 cut(s) 651
BanI GGYRCC 1 cut(s) 506
BanII GRGCYC 1 cut(s) 405
Bbv12I GWGCWC 1 cut(s) 1339
BbvI GCAGC 1 cut(s) 474
BccI CCATC 3 cut(s) 524, 806, 1161
BceAI ACGGC 1 cut(s) 1433
BcgI CGANNNNNNTGC 2 cut(s) 1070, 1104
BciT130I CCWGG 1 cut(s) 417
BcnI CCSGG 2 cut(s) 1304, 1441
BcoDI GTCTC 4 cut(s) 237, 362, 929, 1355
BfaI CTAG 2 cut(s) 861, 1148
BfmI CTRYAG 1 cut(s) 820
BfoI RGCGCY 1 cut(s) 756
BfuAI ACCTGC 1 cut(s) 1337
BisI GCNGC 2 cut(s) 488, 1062
BlsI GCNGC 2 cut(s) 489, 1063
Bme1390I CCNGG 3 cut(s) 417, 1304, 1441
Bme18I GGWCC 2 cut(s) 412, 890
BmgBI CACGTC 2 cut(s) 1136, 1160
BmgT120I GGNCC 3 cut(s) 412, 890, 1305
BmiI GGNNCC 3 cut(s) 414, 508, 687
BmrFI CCNGG 3 cut(s) 417, 1304, 1441
BmsI GCATC 4 cut(s) 836, 992, 1201, 1306
BplI GAGNNNNNCTC 4 cut(s) 288, 320, 387, 419
BpmI CTGGAG 2 cut(s) 76, 1412
Bpu14I TTCGAA 1 cut(s) 194
BpuEI CTTGAG 2 cut(s) 394, 1496
BpuMI CCSGG 2 cut(s) 1304, 1441
BsaBI GATNNNNATC 1 cut(s) 171
BsaI GGTCTC 3 cut(s) 237, 362, 1355
BsaJI CCNNGG 4 cut(s) 200, 227, 415, 416
BsaWI WCCGGW 1 cut(s) 503
BsaXI ACNNNNNCTCC 2 cut(s) 88, 118
Bsc4I CCNNNNNNNGG 2 cut(s) 999, 1109
Bse118I RCCGGY 1 cut(s) 503
Bse1I ACTGG 5 cut(s) 781, 893, 1076, 1491, 1499
Bse21I CCTNAGG 1 cut(s) 1108
Bse3DI GCAATG 3 cut(s) 286, 676, 1377
Bse8I GATNNNNATC 1 cut(s) 171
BseBI CCWGG 1 cut(s) 417
BseDI CCNNGG 4 cut(s) 200, 227, 415, 416
BseGI GGATG 1 cut(s) 1153
BseJI GATNNNNATC 1 cut(s) 171
BseLI CCNNNNNNNGG 2 cut(s) 999, 1109
BseMI GCAATG 3 cut(s) 286, 676, 1377
BseMII CTCAG 5 cut(s) 248, 396, 418, 483, 1122
BseNI ACTGG 5 cut(s) 781, 893, 1076, 1491, 1499
BseRI GAGGAG 5 cut(s) 470, 486, 497, 540, 698
BseSI GKGCMC 1 cut(s) 651
BseXI GCAGC 1 cut(s) 474
BseYI CCCAGC 1 cut(s) 1224
BsgI GTGCAG 2 cut(s) 972, 1365
Bsh1236I CGCG 1 cut(s) 1030
BshFI GGCC 4 cut(s) 205, 269, 1307, 1420
BshNI GGYRCC 1 cut(s) 506
BshTI ACCGGT 1 cut(s) 503
BsiHKAI GWGCWC 1 cut(s) 1339
BsiSI CCGG 3 cut(s) 504, 1303, 1441
BslFI GGGAC 1 cut(s) 127
BslI CCNNNNNNNGG 2 cut(s) 999, 1109
BsmAI GTCTC 4 cut(s) 237, 362, 929, 1355
BsmFI GGGAC 1 cut(s) 127
BsmI GAATGC 1 cut(s) 1250
BsnI GGCC 4 cut(s) 205, 269, 1307, 1420
Bso31I GGTCTC 3 cut(s) 237, 362, 1355
Bsp119I TTCGAA 1 cut(s) 194
Bsp1286I GDGCHC 3 cut(s) 405, 651, 1339
Bsp143I GATC 5 cut(s) 30, 166, 301, 547, 642
Bsp19I CCATGG 1 cut(s) 200
BspACI CCGC 4 cut(s) 130, 151, 187, 1062
BspANI GGCC 4 cut(s) 205, 269, 1307, 1420
BspCNI CTCAG 5 cut(s) 247, 395, 417, 484, 1121
BspFNI CGCG 1 cut(s) 1030
BspLI GGNNCC 3 cut(s) 414, 508, 687
BspMI ACCTGC 1 cut(s) 1337
BspPI GGATC 3 cut(s) 25, 555, 650
BspT104I TTCGAA 1 cut(s) 194
BspT107I GGYRCC 1 cut(s) 506
BspTNI GGTCTC 3 cut(s) 237, 362, 1355
BsrDI GCAATG 3 cut(s) 286, 676, 1377
BsrFI RCCGGY 1 cut(s) 503
BsrI ACTGG 5 cut(s) 781, 893, 1076, 1491, 1499
BssAI RCCGGY 1 cut(s) 503
BssECI CCNNGG 4 cut(s) 200, 227, 415, 416
BssMI GATC 5 cut(s) 30, 166, 301, 547, 642
BssT1I CCWWGG 2 cut(s) 200, 227
Bst2UI CCWGG 1 cut(s) 417
Bst4CI ACNGT 3 cut(s) 821, 1272, 1384
Bst6I CTCTTC 1 cut(s) 474
BstAPI GCANNNNNTGC 1 cut(s) 1436
BstBI TTCGAA 1 cut(s) 194
BstC8I GCNNGC 2 cut(s) 130, 1104
BstDEI CTNAG 7 cut(s) 234, 382, 404, 492, 866, 1108, 1187
BstDSI CCRYGG 1 cut(s) 200
BstF5I GGATG 1 cut(s) 1153
BstFNI CGCG 1 cut(s) 1030
BstH2I RGCGCY 1 cut(s) 756
BstHHI GCGC 2 cut(s) 755, 1030
BstKTI GATC 5 cut(s) 33, 169, 304, 550, 645
BstMAI GTCTC 4 cut(s) 237, 362, 929, 1355
BstMBI GATC 5 cut(s) 30, 166, 301, 547, 642
BstMWI GCNNNNNNNGC 4 cut(s) 211, 761, 1343, 1436
BstNI CCWGG 1 cut(s) 417
BstNSI RCATGY 1 cut(s) 1285
BstSCI CCNGG 3 cut(s) 415, 1302, 1439
BstSFI CTRYAG 1 cut(s) 820
BstSLI GKGCMC 1 cut(s) 651
BstUI CGCG 1 cut(s) 1030
BstV1I GCAGC 1 cut(s) 474
BstX2I RGATCY 1 cut(s) 30
BstYI RGATCY 1 cut(s) 30
Bsu36I CCTNAGG 1 cut(s) 1108
BsuRI GGCC 4 cut(s) 205, 269, 1307, 1420
BtgI CCRYGG 1 cut(s) 200
BtrI CACGTC 2 cut(s) 1136, 1160
BtsCI GGATG 1 cut(s) 1153
BtsIMutI CAGTG 5 cut(s) 370, 671, 774, 817, 1083
BveI ACCTGC 1 cut(s) 1337
Cac8I GCNNGC 2 cut(s) 130, 1104
CfoI GCGC 2 cut(s) 755, 1030
Cfr10I RCCGGY 1 cut(s) 503
Cfr13I GGNCC 3 cut(s) 412, 890, 1305
Csp6I GTAC 1 cut(s) 184
CspAI ACCGGT 1 cut(s) 503
CviQI GTAC 1 cut(s) 184
DdeI CTNAG 7 cut(s) 234, 382, 404, 492, 866, 1108, 1187
DpnI GATC 5 cut(s) 32, 168, 303, 549, 644
DpnII GATC 5 cut(s) 30, 166, 301, 547, 642
EaeI YGGCCR 1 cut(s) 1418
Eam1104I CTCTTC 1 cut(s) 474
EarI CTCTTC 1 cut(s) 474
Eco130I CCWWGG 2 cut(s) 200, 227
Eco147I AGGCCT 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 405
Eco31I GGTCTC 3 cut(s) 237, 362, 1355
Eco47I GGWCC 2 cut(s) 412, 890
Eco47III AGCGCT 1 cut(s) 754
Eco57I CTGAAG 2 cut(s) 47, 647
Eco81I CCTNAGG 1 cut(s) 1108
EcoRII CCWGG 1 cut(s) 415
EcoT14I CCWWGG 2 cut(s) 200, 227
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 2 cut(s) 200, 227
FalI AAGNNNNNCTT 2 cut(s) 558, 590
FaqI GGGAC 1 cut(s) 127
FauI CCCGC 1 cut(s) 137
Fnu4HI GCNGC 2 cut(s) 488, 1062
FokI GGATG 1 cut(s) 1140
FriOI GRGCYC 1 cut(s) 405
Fsp4HI GCNGC 2 cut(s) 488, 1062
FspBI CTAG 2 cut(s) 861, 1148
GlaI GCGC 2 cut(s) 754, 1029
GluI GCNGC 2 cut(s) 488, 1062
GsaI CCCAGC 1 cut(s) 1228
GsuI CTGGAG 2 cut(s) 76, 1412
HaeII RGCGCY 1 cut(s) 756
HaeIII GGCC 4 cut(s) 205, 269, 1307, 1420
HapII CCGG 3 cut(s) 504, 1303, 1441
HhaI GCGC 2 cut(s) 755, 1030
Hin6I GCGC 2 cut(s) 753, 1028
HinP1I GCGC 2 cut(s) 753, 1028
HindIII AAGCTT 1 cut(s) 1514
HinfI GANTC 6 cut(s) 297, 334, 771, 937, 1178, 1387
HpaII CCGG 3 cut(s) 504, 1303, 1441
HphI GGTGA 5 cut(s) 455, 608, 712, 912, 1058
Hpy166II GTNNAC 2 cut(s) 288, 1496
Hpy188I TCNGA 5 cut(s) 237, 407, 516, 642, 1039
Hpy188III TCNNGA 8 cut(s) 93, 435, 575, 768, 833, 1313, 1391, 1475
Hpy8I GTNNAC 2 cut(s) 288, 1496
Hpy99I CGWCG 1 cut(s) 1137
HpyAV CCTTC 3 cut(s) 44, 313, 386
HpyCH4III ACNGT 3 cut(s) 821, 1272, 1384
HpyCH4IV ACGT 2 cut(s) 1135, 1159
HpyF10VI GCNNNNNNNGC 4 cut(s) 211, 761, 1343, 1436
HpyF3I CTNAG 7 cut(s) 234, 382, 404, 492, 866, 1108, 1187
HpySE526I ACGT 2 cut(s) 1135, 1159
HspAI GCGC 2 cut(s) 753, 1028
Kzo9I GATC 5 cut(s) 30, 166, 301, 547, 642
LmnI GCTCC 3 cut(s) 263, 484, 685
Lsp1109I GCAGC 1 cut(s) 474
LweI GCATC 4 cut(s) 836, 992, 1201, 1306
MaeI CTAG 2 cut(s) 861, 1148
MaeII ACGT 2 cut(s) 1135, 1159
MaeIII GTNAC 4 cut(s) 18, 559, 700, 772
MalI GATC 5 cut(s) 32, 168, 303, 549, 644
MboI GATC 5 cut(s) 30, 166, 301, 547, 642
MboII GAAGA 6 cut(s) 40, 433, 491, 848, 974, 1151
MflI RGATCY 1 cut(s) 30
MhlI GDGCHC 3 cut(s) 405, 651, 1339
MluCI AATT 3 cut(s) 623, 970, 1434
MlyI GAGTC 4 cut(s) 306, 780, 931, 1187
MmeI TCCRAC 1 cut(s) 1434
MslI CAYNNNNRTG 2 cut(s) 1011, 1286
MspI CCGG 3 cut(s) 504, 1303, 1441
MspR9I CCNGG 3 cut(s) 417, 1304, 1441
Mva1269I GAATGC 1 cut(s) 1250
MvaI CCWGG 1 cut(s) 417
MvnI CGCG 1 cut(s) 1030
MwoI GCNNNNNNNGC 4 cut(s) 211, 761, 1343, 1436
NciI CCSGG 2 cut(s) 1304, 1441
NcoI CCATGG 1 cut(s) 200
NdeII GATC 5 cut(s) 30, 166, 301, 547, 642
NlaIV GGNNCC 3 cut(s) 414, 508, 687
NmuCI GTSAC 3 cut(s) 559, 700, 772
NspI RCATGY 1 cut(s) 1285
NspV TTCGAA 1 cut(s) 194
PasI CCCWGGG 1 cut(s) 416
PceI AGGCCT 1 cut(s) 269
PciI ACATGT 1 cut(s) 1281
PctI GAATGC 1 cut(s) 1250
PfeI GAWTC 2 cut(s) 334, 1387
PinAI ACCGGT 1 cut(s) 503
PkrI GCNGC 2 cut(s) 489, 1063
PleI GAGTC 4 cut(s) 305, 779, 931, 1186
PpsI GAGTC 4 cut(s) 305, 779, 931, 1186
PscI ACATGT 1 cut(s) 1281
PshBI ATTAAT 2 cut(s) 1433, 1470
Psp6I CCWGG 1 cut(s) 415
PspFI CCCAGC 1 cut(s) 1224
PspGI CCWGG 1 cut(s) 415
PspN4I GGNNCC 3 cut(s) 414, 508, 687
PspPI GGNCC 3 cut(s) 412, 890, 1305
PsuI RGATCY 1 cut(s) 30
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
RseI CAYNNNNRTG 2 cut(s) 1011, 1286
SatI GCNGC 2 cut(s) 488, 1062
Sau3AI GATC 5 cut(s) 30, 166, 301, 547, 642
Sau96I GGNCC 3 cut(s) 412, 890, 1305
SchI GAGTC 4 cut(s) 306, 780, 931, 1187
ScrFI CCNGG 3 cut(s) 417, 1304, 1441
SduI GDGCHC 3 cut(s) 405, 651, 1339
SfaNI GCATC 4 cut(s) 836, 992, 1201, 1306
SfcI CTRYAG 1 cut(s) 820
SfuI TTCGAA 1 cut(s) 194
SinI GGWCC 2 cut(s) 412, 890
SmiMI CAYNNNNRTG 2 cut(s) 1011, 1286
SmlI CTYRAG 2 cut(s) 373, 1475
SmoI CTYRAG 2 cut(s) 373, 1475
Sse9I AATT 3 cut(s) 623, 970, 1434
SseBI AGGCCT 1 cut(s) 269
SsiI CCGC 4 cut(s) 130, 151, 187, 1062
SspMI CTAG 2 cut(s) 861, 1148
StuI AGGCCT 1 cut(s) 269
StyD4I CCNGG 3 cut(s) 415, 1302, 1439
StyI CCWWGG 2 cut(s) 200, 227
TaaI ACNGT 3 cut(s) 821, 1272, 1384
TaiI ACGT 2 cut(s) 1138, 1162
TaqI TCGA 5 cut(s) 194, 300, 790, 1132, 1181
TasI AATT 3 cut(s) 623, 970, 1434
TauI GCSGC 1 cut(s) 1064
TfiI GAWTC 2 cut(s) 334, 1387
TscAI CASTG 5 cut(s) 370, 671, 781, 824, 1083
TseFI GTSAC 3 cut(s) 559, 700, 772
TseI GCWGC 1 cut(s) 487
Tsp45I GTSAC 3 cut(s) 559, 700, 772
TspDTI ATGAA 4 cut(s) 17, 975, 1209, 1304
TspGWI ACGGA 2 cut(s) 537, 755
TspRI CASTG 5 cut(s) 370, 671, 781, 824, 1083
VpaK11BI GGWCC 2 cut(s) 412, 890
VspI ATTAAT 2 cut(s) 1433, 1470
XceI RCATGY 1 cut(s) 1285
XspI CTAG 2 cut(s) 861, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.