Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005493

Physical Location & Seq

Genomic Coordinates Reverse (-)

15629501 .. 15632836

Gene Structure 3336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g14300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGTTGAAAACCACGAAACTTAAGAGTAATAAACTGATATTTACCCAAAAAATAAACACCTTACTATTTTTTTTCATAACTTTTGATTTTCACCGCAGCAAAAGCAATTTTGGAAAGAGAGAAACAAAAGATTGCAAATCCAACGATGCCCTAGGTAATCTTCCCAAAACAACCGTGCAGAAGAATGTAAAACTCGTAAGCAACAACACTTGCCGAACTTTAATTGGTCCCCGCACTCTAACAACCGCAGTTTACCCTTCTTCCTGCAACGCCAGAAATTCAACGGTACAGACTTATCACCTTTCAGAGCGAGAGAGAGAGCGCGCCATGAACAGAAGGAACTTGCTTCTGCTCAAGATCCTTCTGTTTCTATTTGCCCTAAACTCCCTCTCTCTCCTCCTCTACTTCACTTCCAACTCCAGAACGCTTACTCCAACCCAAACCCAAACCCACCACTTTTTCTCCCTCAGCCGCCTCCCCTTAACCGATCAGAACCGCCTCCTCCCGCACCGCTACTTGAAGCCATGGCCGATTTTACCCTCCTACCTCCCCTGGTCCCAGACAACCCAGGTCCCCTTTCGCTCCTGCGAGGCCTATTTCGGCAATGGCTTCACTACCGTGGTCGATCTCTTGAAACCCAAGAAAGATTTGAGCTCGAATCGCATGGGTTGGTTCAGGTGCTGGTTCAGTGATACCTTGAGGAGCTCAGTGTGCGAAGGAGGGGGGCTCCGGATGTACCCAGAAAAGATTAAGATGTCTAGGGGAGGTGAGGTTTTGGAGGAGGTGATTGGAAGAGGAGAAAAAGAGGAGCTGCCGGAGTATGAAGACGGTGCGTTTGAGATTGATGGTGGAGATGGGGTTGATGGAGGAGGGGGTCAGAATCTTGTGACCCAAGAACTTCTTGACCGGTATGTGCCTAAGGGTCAGATTGATCAGCACACTATGAGAGAACTGATTGGATCGATTCGGATCGTGCCCAGTGCAGAGTTTCAATGCAATGAGTGGATTGAGGAGCCAACACTTCTGGTGACACGCTTTGAGTATGCAAATCTTTTCCACACATTCACAGATTGGTATAGCGCTTATGTAGCTTCAAGAGTCATTGGCTTACCAAATCGACCTCATTTGGTCTTTGTAGATGGCCACTGTATGACATCTTTGGAAGAAACATGGAAAGCATTATTTTCTAGCCTTCGATATGCTAAAAACTTTAGTGGTCCTGTATGTTTTCGTCATGCTATTCTCTCTCCTTTGGGATATGAAACTCCACTTTTTAAGGGGTTGAGTGAAACTATAAATTGTCGTGGTGCATCGGCACCTGATCTATGGCAACACCCTGATGACCGGAAAACAGCGCGAATGTCAGAGTTTGGAGAAATGATTAAAGCCTCTTTTGGATTTCCAGTACATAGACATCGTTTTGAGAAGCCAACTTTAGCTCATAACGTTCTTTTTGTTCGACGTGAAGATTATCTAGCCCATCCACGCCACCGTGGTAAGGTTGAGTCAAGGCTAAGCAATGAACAAGAAGTGTTTGATGCCTTGCAGAACTGGGCATCTAATCACAAGGAATGCAAAATAAACCTTGTGAATGGATTGTTTGCACACATGTCGATGAAAGAGCAAGTCCGGGCCATTCAAGATGCTTCTGTTATTATTGGTGCTCATGGTGCAGGTCTTACACACATGGTATCAGCAATGCCAAAGACCGTGATTCTGGAGATTATTAGCAGTCAGTATAGACGCCCACATTTTGCATTAATTGCTCAGTGGAAAGGGTTGGAATATCATGCCATTAATCTCGACGGCTCATTTGCCAGTCCACCAGTTGTTGTTGACAGGCTTAACGGCATAATCAGAAGCCTTGGGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005797 GO:0006464 GO:0006486 GO:0006487 GO:0006605 GO:0006612 GO:0006620 GO:0006807 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016740 GO:0016757 GO:0016763 GO:0019538 GO:0031090 GO:0031204 GO:0031984 GO:0031985 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0035252 GO:0036211 GO:0042285 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046907 GO:0050513 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070085 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0098588 GO:0098791 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00513 ko01100 map00513 map01100

Pfam Domains

Protein Families

DUF563

Protein Analysis

625

Amino Acids

71.13

Weight (kDa)

9.24

Isoelectric Point (pI)

37.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55500
fragaria_vesca	FvH4_3g23790
malus_domestica	MD03G1190200.v1.1 MD11G1206700.v1.1
prunus_persica	Prupe.4G229800_v2.0.a1 Prupe.4G229800_v2.0.a1
pyrus_communis	pycom03g14300 pycom11g17980
rosa_chinensis	RchiOBHm_Chr5g0041921 RchiOBHm_Chr5g0041971 RchiOBHm_Chr5g0080011
rosa_laevigata	RLG00000034106 RLG00000036844
rosa_multiflora	Rmu_sc0009443.1_g000005
rosa_roxburghii	Rroxscaffold_1G00038610
rosa_rugosa	Rorug05G0197400 Rorug05G0467700
rosa_samantha	Rh5AG282500 Rh5BG287400 Rh5BG287900 Rh5BG543400 Rh5CG319100 Rh5CG319700 Rh5CG566700 Rh5DG296200 Rh5DG296800 Rh5DG553300
rosa_wichuraiana	Rw0G001370 Rw5G048370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1664
AccB1I	GGYRCC	1 cut(s)	1315
AccII	CGCG	2 cut(s)	324, 1357
AccIII	TCCGGA	1 cut(s)	729
AciI	CCGC	7 cut(s)	94, 232, 246, 472, 496, 506, 511
AclI	AACGTT	1 cut(s)	1446
AclWI	GGATC	3 cut(s)	352, 967, 977
AcoI	YGGCCR	2 cut(s)	527, 1141
AcsI	RAATTY	1 cut(s)	277
AcyI	GRCGYC	1 cut(s)	1744
AfaI	GTAC	3 cut(s)	288, 737, 1407
AfeI	AGCGCT	1 cut(s)	1081
AfiI	CCNNNNNNNGG	1 cut(s)	1498
AflII	CTTAAG	1 cut(s)	20
AflIII	ACRYGT	1 cut(s)	1608
AgeI	ACCGGT	1 cut(s)	906
AgsI	TTSAA	7 cut(s)	7, 282, 520, 634, 992, 1095, 1640
AjiI	CACGTC	1 cut(s)	1463
AjnI	CCWGG	2 cut(s)	551, 567
AleI	CACNNNNGTG	1 cut(s)	617
AloI	GAACNNNNNNTCC	2 cut(s)	415, 447
AluBI	AGCT	5 cut(s)	654, 705, 811, 1091, 1439
AluI	AGCT	5 cut(s)	654, 705, 811, 1091, 1439
Alw21I	GWGCWC	3 cut(s)	656, 707, 1666
AlwI	GGATC	3 cut(s)	352, 967, 977
AlwNI	CAGNNNCTG	1 cut(s)	681
Aor13HI	TCCGGA	1 cut(s)	729
Aor51HI	AGCGCT	1 cut(s)	1081
AoxI	GGCC	4 cut(s)	527, 591, 1141, 1632
ApeKI	GCWGC	2 cut(s)	96, 811
ApoI	RAATTY	1 cut(s)	277
ArsI	GACNNNNNNTTYG	4 cut(s)	818, 850, 1796, 1828
AseI	ATTAAT	2 cut(s)	1760, 1797
AsiGI	ACCGGT	1 cut(s)	906
AspA2I	CCTAGG	1 cut(s)	151
AspLEI	GCGC	4 cut(s)	324, 326, 1082, 1357
AspS9I	GGNCC	5 cut(s)	227, 555, 571, 1217, 1632
AsuC2I	CCSGG	1 cut(s)	1631
AsuHPI	GGTGA	5 cut(s)	83, 290, 779, 796, 1039
AvaII	GGWCC	4 cut(s)	227, 555, 571, 1217
AvrII	CCTAGG	1 cut(s)	151
AxyI	CCTNAGG	1 cut(s)	918
BaeGI	GKGCMC	1 cut(s)	978
BalI	TGGCCA	1 cut(s)	1143
BanI	GGYRCC	1 cut(s)	1315
BanII	GRGCYC	3 cut(s)	656, 707, 729
BbsI	GAAGAC	1 cut(s)	831
Bbv12I	GWGCWC	3 cut(s)	656, 707, 1666
BbvCI	CCTCAGC	1 cut(s)	467
BbvI	GCAGC	2 cut(s)	108, 798
BccI	CCATC	5 cut(s)	839, 848, 857, 1133, 1488
BceAI	ACGGC	2 cut(s)	1822, 1864
BcgI	CGANNNNNNTGC	2 cut(s)	1593, 1627
BciT130I	CCWGG	2 cut(s)	553, 569
BclI	TGATCA	1 cut(s)	931
BcnI	CCSGG	1 cut(s)	1631
BfaI	CTAG	4 cut(s)	152, 759, 1188, 1475
BfoI	RGCGCY	1 cut(s)	1083
BfrI	CTTAAG	1 cut(s)	20
BfuAI	ACCTGC	1 cut(s)	1664
BisI	GCNGC	3 cut(s)	97, 472, 812
BlnI	CCTAGG	1 cut(s)	151
BlpI	GCTNAGC	1 cut(s)	1514
BlsI	GCNGC	3 cut(s)	98, 473, 813
Bme1390I	CCNGG	3 cut(s)	553, 569, 1631
Bme18I	GGWCC	4 cut(s)	227, 555, 571, 1217
BmgBI	CACGTC	1 cut(s)	1463
BmgT120I	GGNCC	5 cut(s)	227, 555, 571, 1217, 1632
BmiI	GGNNCC	6 cut(s)	229, 557, 573, 728, 1014, 1317
BmrFI	CCNGG	3 cut(s)	553, 569, 1631
BmrI	ACTGGG	2 cut(s)	972, 1561
BmsI	GCATC	5 cut(s)	136, 1319, 1528, 1565, 1633
BmuI	ACTGGG	2 cut(s)	972, 1561
BpiI	GAAGAC	1 cut(s)	831
BplI	GAGNNNNNCTC	2 cut(s)	711, 743
BpmI	CTGGAG	2 cut(s)	403, 1739
Bpu10I	CCTNAGC	1 cut(s)	467
Bpu1102I	GCTNAGC	1 cut(s)	1514
BpuEI	CTTGAG	2 cut(s)	338, 718
BpuMI	CCSGG	1 cut(s)	1631
Bsa29I	ATCGAT	1 cut(s)	962
BsaBI	GATNNNNATC	1 cut(s)	968
BsaHI	GRCGYC	1 cut(s)	1744
BsaJI	CCNNGG	7 cut(s)	151, 524, 551, 567, 618, 1492, 1864
BsaWI	WCCGGW	3 cut(s)	729, 906, 1344
BsaXI	ACNNNNNCTCC	8 cut(s)	415, 445, 446, 476, 756, 786, 843, 873
Bsc4I	CCNNNNNNNGG	1 cut(s)	1498
Bse118I	RCCGGY	1 cut(s)	906
Bse1I	ACTGG	5 cut(s)	978, 1403, 1556, 1818, 1826
Bse21I	CCTNAGG	1 cut(s)	918
Bse3DI	GCAATG	4 cut(s)	610, 1003, 1525, 1704
Bse8I	GATNNNNATC	1 cut(s)	968
BseAI	TCCGGA	1 cut(s)	729
BseBI	CCWGG	2 cut(s)	553, 569
BseCI	ATCGAT	1 cut(s)	962
BseDI	CCNNGG	7 cut(s)	151, 524, 551, 567, 618, 1492, 1864
BseGI	GGATG	2 cut(s)	738, 1480
BseJI	GATNNNNATC	1 cut(s)	968
BseLI	CCNNNNNNNGG	1 cut(s)	1498
BseMI	GCAATG	4 cut(s)	610, 1003, 1525, 1704
BseMII	CTCAG	3 cut(s)	481, 720, 1781
BseNI	ACTGG	5 cut(s)	978, 1403, 1556, 1818, 1826
BsePI	GCGCGC	1 cut(s)	322
BseRI	GAGGAG	9 cut(s)	386, 389, 491, 715, 794, 810, 821, 882, 1025
BseSI	GKGCMC	1 cut(s)	978
BseXI	GCAGC	2 cut(s)	108, 798
BsgI	GTGCAG	3 cut(s)	197, 1002, 1692
Bsh1236I	CGCG	2 cut(s)	324, 1357
BshFI	GGCC	4 cut(s)	529, 593, 1143, 1634
BshNI	GGYRCC	1 cut(s)	1315
BshTI	ACCGGT	1 cut(s)	906
BshVI	ATCGAT	1 cut(s)	962
BsiHKAI	GWGCWC	3 cut(s)	656, 707, 1666
BsiSI	CCGG	5 cut(s)	730, 815, 907, 1345, 1630
BslFI	GGGAC	3 cut(s)	213, 541, 557
BslI	CCNNNNNNNGG	1 cut(s)	1498
BsmFI	GGGAC	3 cut(s)	213, 541, 557
BsmI	GAATGC	1 cut(s)	1577
BsnI	GGCC	4 cut(s)	529, 593, 1143, 1634
Bsp1286I	GDGCHC	5 cut(s)	656, 707, 729, 978, 1666
Bsp13I	TCCGGA	1 cut(s)	729
Bsp143I	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
Bsp1720I	GCTNAGC	1 cut(s)	1514
Bsp19I	CCATGG	1 cut(s)	524
BspACI	CCGC	7 cut(s)	94, 232, 246, 472, 496, 506, 511
BspANI	GGCC	4 cut(s)	529, 593, 1143, 1634
BspCNI	CTCAG	3 cut(s)	480, 719, 1780
BspDI	ATCGAT	1 cut(s)	962
BspEI	TCCGGA	1 cut(s)	729
BspFNI	CGCG	2 cut(s)	324, 1357
BspLI	GGNNCC	6 cut(s)	229, 557, 573, 728, 1014, 1317
BspMI	ACCTGC	1 cut(s)	1664
BspPI	GGATC	3 cut(s)	352, 967, 977
BspT107I	GGYRCC	1 cut(s)	1315
BspTI	CTTAAG	1 cut(s)	20
BsrDI	GCAATG	4 cut(s)	610, 1003, 1525, 1704
BsrFI	RCCGGY	1 cut(s)	906
BsrI	ACTGG	5 cut(s)	978, 1403, 1556, 1818, 1826
BssAI	RCCGGY	1 cut(s)	906
BssECI	CCNNGG	7 cut(s)	151, 524, 551, 567, 618, 1492, 1864
BssHII	GCGCGC	1 cut(s)	322
BssMI	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
BssNI	GRCGYC	1 cut(s)	1744
BssT1I	CCWWGG	3 cut(s)	151, 524, 1864
Bst2UI	CCWGG	2 cut(s)	553, 569
Bst4CI	ACNGT	7 cut(s)	175, 286, 619, 830, 1148, 1493, 1711
Bst6I	CTCTTC	1 cut(s)	787
BstACI	GRCGYC	1 cut(s)	1744
BstAFI	CTTAAG	1 cut(s)	20
BstAPI	GCANNNNNTGC	1 cut(s)	1763
BstC8I	GCNNGC	1 cut(s)	324
BstDEI	CTNAG	5 cut(s)	467, 706, 918, 1514, 1767
BstDSI	CCRYGG	3 cut(s)	524, 618, 1492
BstF5I	GGATG	2 cut(s)	738, 1480
BstFNI	CGCG	2 cut(s)	324, 1357
BstH2I	RGCGCY	1 cut(s)	1083
BstHHI	GCGC	4 cut(s)	324, 326, 1082, 1357
BstKTI	GATC	7 cut(s)	360, 490, 628, 934, 962, 972, 1324
BstMBI	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
BstMWI	GCNNNNNNNGC	7 cut(s)	102, 660, 711, 1088, 1670, 1763, 1869
BstNI	CCWGG	2 cut(s)	553, 569
BstNSI	RCATGY	1 cut(s)	1612
BstSCI	CCNGG	3 cut(s)	551, 567, 1629
BstSLI	GKGCMC	1 cut(s)	978
BstUI	CGCG	2 cut(s)	324, 1357
BstV1I	GCAGC	2 cut(s)	108, 798
BstV2I	GAAGAC	1 cut(s)	831
BstX2I	RGATCY	1 cut(s)	357
BstYI	RGATCY	1 cut(s)	357
Bsu15I	ATCGAT	1 cut(s)	962
Bsu36I	CCTNAGG	1 cut(s)	918
BsuRI	GGCC	4 cut(s)	529, 593, 1143, 1634
BsuTUI	ATCGAT	1 cut(s)	962
BtgI	CCRYGG	3 cut(s)	524, 618, 1492
BtrI	CACGTC	1 cut(s)	1463
BtsCI	GGATG	2 cut(s)	738, 1480
BtsIMutI	CAGTG	5 cut(s)	694, 714, 985, 1144, 1775
BveI	ACCTGC	1 cut(s)	1664
Cac8I	GCNNGC	1 cut(s)	324
CaiI	CAGNNNCTG	1 cut(s)	681
CfoI	GCGC	4 cut(s)	324, 326, 1082, 1357
Cfr10I	RCCGGY	1 cut(s)	906
Cfr13I	GGNCC	5 cut(s)	227, 555, 571, 1217, 1632
ClaI	ATCGAT	1 cut(s)	962
CseI	GACGC	1 cut(s)	1752
Csp6I	GTAC	3 cut(s)	287, 736, 1406
CspAI	ACCGGT	1 cut(s)	906
CviAII	CATG	9 cut(s)	328, 525, 664, 1170, 1235, 1609, 1667, 1687, 1790
CviQI	GTAC	3 cut(s)	287, 736, 1406
DdeI	CTNAG	5 cut(s)	467, 706, 918, 1514, 1767
DpnI	GATC	7 cut(s)	359, 489, 627, 933, 961, 971, 1323
DpnII	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
EaeI	YGGCCR	2 cut(s)	527, 1141
Eam1104I	CTCTTC	1 cut(s)	787
EarI	CTCTTC	1 cut(s)	787
Ecl136II	GAGCTC	2 cut(s)	654, 705
Eco130I	CCWWGG	3 cut(s)	151, 524, 1864
Eco147I	AGGCCT	1 cut(s)	593
Eco24I	GRGCYC	3 cut(s)	656, 707, 729
Eco47I	GGWCC	4 cut(s)	227, 555, 571, 1217
Eco47III	AGCGCT	1 cut(s)	1081
Eco53kI	GAGCTC	2 cut(s)	654, 705
Eco81I	CCTNAGG	1 cut(s)	918
EcoICRI	GAGCTC	2 cut(s)	654, 705
EcoO109I	RGGNCCY	1 cut(s)	571
EcoRII	CCWGG	2 cut(s)	551, 567
EcoT14I	CCWWGG	3 cut(s)	151, 524, 1864
EcoT38I	GRGCYC	3 cut(s)	656, 707, 729
ErhI	CCWWGG	3 cut(s)	151, 524, 1864
FaeI	CATG	9 cut(s)	331, 528, 667, 1173, 1238, 1612, 1670, 1690, 1793
FalI	AAGNNNNNCTT	2 cut(s)	885, 917
FaqI	GGGAC	3 cut(s)	213, 541, 557
FatI	CATG	9 cut(s)	327, 524, 663, 1169, 1234, 1608, 1666, 1686, 1789
FauI	CCCGC	2 cut(s)	239, 513
FbaI	TGATCA	1 cut(s)	931
Fnu4HI	GCNGC	3 cut(s)	97, 472, 812
FokI	GGATG	2 cut(s)	745, 1467
FriOI	GRGCYC	3 cut(s)	656, 707, 729
Fsp4HI	GCNGC	3 cut(s)	97, 472, 812
FspBI	CTAG	4 cut(s)	152, 759, 1188, 1475
GlaI	GCGC	4 cut(s)	323, 325, 1081, 1356
GluI	GCNGC	3 cut(s)	97, 472, 812
GsuI	CTGGAG	2 cut(s)	403, 1739
HaeII	RGCGCY	1 cut(s)	1083
HaeIII	GGCC	4 cut(s)	529, 593, 1143, 1634
HapII	CCGG	5 cut(s)	730, 815, 907, 1345, 1630
HgaI	GACGC	1 cut(s)	1752
HhaI	GCGC	4 cut(s)	324, 326, 1082, 1357
Hin1I	GRCGYC	1 cut(s)	1744
Hin1II	CATG	9 cut(s)	331, 528, 667, 1173, 1238, 1612, 1670, 1690, 1793
Hin6I	GCGC	4 cut(s)	322, 324, 1080, 1355
HinP1I	GCGC	4 cut(s)	322, 324, 1080, 1355
HincII	GTYRAC	1 cut(s)	1837
HindII	GTYRAC	1 cut(s)	1837
HinfI	GANTC	6 cut(s)	658, 880, 964, 1098, 1505, 1714
HpaII	CCGG	5 cut(s)	730, 815, 907, 1345, 1630
HphI	GGTGA	5 cut(s)	83, 290, 779, 796, 1039
Hpy166II	GTNNAC	3 cut(s)	253, 1823, 1837
Hpy188I	TCNGA	7 cut(s)	307, 492, 879, 927, 969, 1366, 1859
Hpy188III	TCNNGA	9 cut(s)	355, 420, 631, 730, 902, 1095, 1640, 1718, 1802
Hpy8I	GTNNAC	3 cut(s)	253, 1823, 1837
Hpy99I	CGWCG	2 cut(s)	1464, 1808
HpyAV	CCTTC	5 cut(s)	267, 330, 371, 710, 1202
HpyCH4III	ACNGT	7 cut(s)	175, 286, 619, 830, 1148, 1493, 1711
HpyCH4IV	ACGT	2 cut(s)	1446, 1462
HpyF10VI	GCNNNNNNNGC	7 cut(s)	102, 660, 711, 1088, 1670, 1763, 1869
HpyF3I	CTNAG	5 cut(s)	467, 706, 918, 1514, 1767
HpySE526I	ACGT	2 cut(s)	1446, 1462
Hsp92I	GRCGYC	1 cut(s)	1744
Hsp92II	CATG	9 cut(s)	331, 528, 667, 1173, 1238, 1612, 1670, 1690, 1793
HspAI	GCGC	4 cut(s)	322, 324, 1080, 1355
Kpn2I	TCCGGA	1 cut(s)	729
Ksp22I	TGATCA	1 cut(s)	931
Kzo9I	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
LmnI	GCTCC	5 cut(s)	587, 702, 732, 808, 1012
Lsp1109I	GCAGC	2 cut(s)	108, 798
LweI	GCATC	5 cut(s)	136, 1319, 1528, 1565, 1633
MaeI	CTAG	4 cut(s)	152, 759, 1188, 1475
MaeII	ACGT	2 cut(s)	1446, 1462
MaeIII	GTNAC	2 cut(s)	886, 1027
MalI	GATC	7 cut(s)	359, 489, 627, 933, 961, 971, 1323
MboI	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
MboII	GAAGA	7 cut(s)	152, 193, 252, 804, 836, 1175, 1478
MflI	RGATCY	1 cut(s)	357
MhlI	GDGCHC	5 cut(s)	656, 707, 729, 978, 1666
MlsI	TGGCCA	1 cut(s)	1143
MluCI	AATT	5 cut(s)	106, 222, 277, 1297, 1761
MluNI	TGGCCA	1 cut(s)	1143
MlyI	GAGTC	2 cut(s)	1107, 1514
MmeI	TCCRAC	4 cut(s)	165, 438, 458, 1761
Mox20I	TGGCCA	1 cut(s)	1143
MroI	TCCGGA	1 cut(s)	729
MscI	TGGCCA	1 cut(s)	1143
MseI	TTAA	9 cut(s)	21, 221, 482, 750, 1275, 1383, 1760, 1797, 1845
MslI	CAYNNNNRTG	3 cut(s)	617, 1338, 1613
Msp20I	TGGCCA	1 cut(s)	1143
MspCI	CTTAAG	1 cut(s)	20
MspI	CCGG	5 cut(s)	730, 815, 907, 1345, 1630
MspR9I	CCNGG	3 cut(s)	553, 569, 1631
Mva1269I	GAATGC	1 cut(s)	1577
MvaI	CCWGG	2 cut(s)	553, 569
MvnI	CGCG	2 cut(s)	324, 1357
MwoI	GCNNNNNNNGC	7 cut(s)	102, 660, 711, 1088, 1670, 1763, 1869
NciI	CCSGG	1 cut(s)	1631
NcoI	CCATGG	1 cut(s)	524
NdeII	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
NlaIII	CATG	9 cut(s)	331, 528, 667, 1173, 1238, 1612, 1670, 1690, 1793
NlaIV	GGNNCC	6 cut(s)	229, 557, 573, 728, 1014, 1317
NmuCI	GTSAC	2 cut(s)	886, 1027
NspI	RCATGY	1 cut(s)	1612
OliI	CACNNNNGTG	1 cut(s)	617
PauI	GCGCGC	1 cut(s)	322
PceI	AGGCCT	1 cut(s)	593
PciI	ACATGT	1 cut(s)	1608
PctI	GAATGC	1 cut(s)	1577
PfeI	GAWTC	4 cut(s)	658, 880, 964, 1714
PinAI	ACCGGT	1 cut(s)	906
PkrI	GCNGC	3 cut(s)	98, 473, 813
PleI	GAGTC	2 cut(s)	1106, 1513
PpsI	GAGTC	2 cut(s)	1106, 1513
PpuMI	RGGWCCY	1 cut(s)	571
PscI	ACATGT	1 cut(s)	1608
PshBI	ATTAAT	2 cut(s)	1760, 1797
Psp124BI	GAGCTC	2 cut(s)	656, 707
Psp1406I	AACGTT	1 cut(s)	1446
Psp5II	RGGWCCY	1 cut(s)	571
Psp6I	CCWGG	2 cut(s)	551, 567
PspGI	CCWGG	2 cut(s)	551, 567
PspN4I	GGNNCC	6 cut(s)	229, 557, 573, 728, 1014, 1317
PspPI	GGNCC	5 cut(s)	227, 555, 571, 1217, 1632
PspPPI	RGGWCCY	1 cut(s)	571
PstNI	CAGNNNCTG	1 cut(s)	681
PsuI	RGATCY	1 cut(s)	357
PteI	GCGCGC	1 cut(s)	322
RsaI	GTAC	3 cut(s)	288, 737, 1407
RsaNI	GTAC	3 cut(s)	287, 736, 1406
RseI	CAYNNNNRTG	3 cut(s)	617, 1338, 1613
SacI	GAGCTC	2 cut(s)	656, 707
SaqAI	TTAA	9 cut(s)	21, 221, 482, 750, 1275, 1383, 1760, 1797, 1845
SatI	GCNGC	3 cut(s)	97, 472, 812
Sau3AI	GATC	7 cut(s)	357, 487, 625, 931, 959, 969, 1321
Sau96I	GGNCC	5 cut(s)	227, 555, 571, 1217, 1632
SchI	GAGTC	2 cut(s)	1107, 1514
ScrFI	CCNGG	3 cut(s)	553, 569, 1631
SduI	GDGCHC	5 cut(s)	656, 707, 729, 978, 1666
SfaNI	GCATC	5 cut(s)	136, 1319, 1528, 1565, 1633
SinI	GGWCC	4 cut(s)	227, 555, 571, 1217
SmiMI	CAYNNNNRTG	3 cut(s)	617, 1338, 1613
SmlI	CTYRAG	3 cut(s)	20, 353, 697
SmoI	CTYRAG	3 cut(s)	20, 353, 697
Sse9I	AATT	5 cut(s)	106, 222, 277, 1297, 1761
SseBI	AGGCCT	1 cut(s)	593
SsiI	CCGC	7 cut(s)	94, 232, 246, 472, 496, 506, 511
SspMI	CTAG	4 cut(s)	152, 759, 1188, 1475
SstI	GAGCTC	2 cut(s)	656, 707
StuI	AGGCCT	1 cut(s)	593
StyD4I	CCNGG	3 cut(s)	551, 567, 1629
StyI	CCWWGG	3 cut(s)	151, 524, 1864
TaaI	ACNGT	7 cut(s)	175, 286, 619, 830, 1148, 1493, 1711
TaiI	ACGT	2 cut(s)	1449, 1465
TaqI	TCGA	8 cut(s)	624, 656, 962, 1117, 1195, 1459, 1613, 1803
TasI	AATT	5 cut(s)	106, 222, 277, 1297, 1761
TatI	WGTACW	1 cut(s)	1405
TauI	GCSGC	1 cut(s)	474
TfiI	GAWTC	4 cut(s)	658, 880, 964, 1714
Tru1I	TTAA	9 cut(s)	21, 221, 482, 750, 1275, 1383, 1760, 1797, 1845
Tru9I	TTAA	9 cut(s)	21, 221, 482, 750, 1275, 1383, 1760, 1797, 1845
TscAI	CASTG	5 cut(s)	694, 714, 985, 1151, 1775
TseFI	GTSAC	2 cut(s)	886, 1027
TseI	GCWGC	2 cut(s)	96, 811
Tsp45I	GTSAC	2 cut(s)	886, 1027
TspDTI	ATGAA	6 cut(s)	64, 344, 837, 1275, 1536, 1631
TspRI	CASTG	5 cut(s)	694, 714, 985, 1151, 1775
Vha464I	CTTAAG	1 cut(s)	20
VpaK11BI	GGWCC	4 cut(s)	227, 555, 571, 1217
VspI	ATTAAT	2 cut(s)	1760, 1797
XapI	RAATTY	1 cut(s)	277
XceI	RCATGY	1 cut(s)	1612
XmaJI	CCTAGG	1 cut(s)	151
XspI	CTAG	4 cut(s)	152, 759, 1188, 1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.