Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0005493

Physical Location & Seq

Genomic Coordinates Forward (+)

35448081 .. 35451423

Gene Structure 3343 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG319700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGAACAAAAACTCGTGGCTCCTGAAGATCGTGGTGTTCCTCTTCGCCCTAAACTCCCTCTCTCTCTGCCTCTACTTCACTTCCCACTCCAAAACCCTAAACACCCCTCCACCCCTCAACCCCCACCCTCAAATCAACCGCCTCCCCCTAACAGATCAAACCCACCGCCACACCTACCGCTTCTCTAAGCCATGGCCGATCCTCCCCTCCTACCTCCCCTGGACCCAGACCCCAAACGCGGAGTTCCGCTCCTGCGAGGCCTACTTCGGCAACGGCTTCACCCGCCGGGTCGATCTCCTCAAGCCCACTAAAGATTCCGGCAGCTGGTTCCGGTGCGCGTTCAGCGAGACCCTGAGGAGCTCGGTGTGCGAGGGAGGGGGGATCCGGATGGTGCCGGAGAGGGTGAAGATGTCGATCGGCGGCGAGGTTTTGGAGGATGTGATTGGGAGAGGGGAGGAGGAGGAGTTGCCGGAGTTTCGAAACGGTGCGTTTGAGGTCAATGGTGGTGGGGTTGGTGGAGGAGAGGAGAGAGGGCTTGTGAGCAGTGAGTTTCTTGATGAGTATGTGCCGCGTGGTGAGATTGGGAAGCATACTATGAGGGAGCTGATCGGGTCGATTCGGGTTGTGCCCAGCAAAGAGTTTCAGTGCACTGAGTGGATTGAGGAGCCAACGCTTCTGGTGACACGGTTTGAGTATGCAAATGTTTTCCACACATTCACGGATTGGTATAGCGGTTATGTAGCTTCCAGAGTCACTGGCTTACCTAGCCGGCCTCATGTTGTCTTTGTAGATGGCCATTGTAGGACACAATTGGAAGAAACATGGAAAGCGTTGTTCTCTAGCATTAGATATGCGAAAAACTTTAGTGGTCCAGTTTGTTTTCGTCATGCTATTATTTCACCTCTTGGATATGAAACTGCATGGTTTAAGGGGCTCACTGAAGATATAGCGTGTGAGGGAGCTTCTGCACCAGAGCTGTGGCAACACCCTGATGACAAGAAAACTGCACGACTGTCTGAGTTTGGAGAAATGATTAGAGCTGCTTTTGGAATTCCAGTGAATAGGCAGCGTATTGAGAAGCAAGCTTCAGGTCTCAATATCCTTTTTGTTCGCCGTGAAGATTATCTACCGCATCCACGTCACGGTGGTAAAGTTGAATCAAGGTTAAGCAACGAACAAGAAGTCTTTGATGCCTTAAAGAGCTGGGTGTCGAATCACAAGGAATGCAAAATAAACTTAGTGAACGGATTGTTTGCACACATGTCGATGAAAGAACAAGTCCGGGCCATTCAAGATGCTTCTGTTATTATTGGTGCTCATGGTGCAGGTCTCACGCATATAGTATCTGCATTGCCGAAAACCGTGGTTCTGGAGATCATTAGCAGCCAATATAGACGGCCACATTTTGCTTTAATTGCCCAGTGGAAAGGGTTGGAATATCATGCCATTAATCTTGCGGGTTTGTATGCCTCTCCGTCAGTTGTTATTGACAACCTCAGCCGTATACTGAGGACCCTTGGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005797 GO:0006464 GO:0006486 GO:0006487 GO:0006605 GO:0006612 GO:0006620 GO:0006807 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016740 GO:0016757 GO:0016763 GO:0019538 GO:0031090 GO:0031204 GO:0031984 GO:0031985 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0035252 GO:0036211 GO:0042285 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046907 GO:0050513 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070085 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0098588 GO:0098791 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00513 ko01100 map00513 map01100

Pfam Domains

Protein Families

DUF563

Protein Analysis

508

Amino Acids

57.29

Weight (kDa)

8.0

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_61	PF04577	360 - 457	1.6e-11	Glycosyltransferase 61

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55500
fragaria_vesca	FvH4_3g23790
malus_domestica	MD03G1190200.v1.1 MD11G1206700.v1.1
prunus_persica	Prupe.4G229800_v2.0.a1 Prupe.4G229800_v2.0.a1
pyrus_communis	pycom03g14300 pycom11g17980
rosa_chinensis	RchiOBHm_Chr5g0041921 RchiOBHm_Chr5g0041971 RchiOBHm_Chr5g0080011
rosa_laevigata	RLG00000034106 RLG00000036844
rosa_multiflora	Rmu_sc0009443.1_g000005
rosa_roxburghii	Rroxscaffold_1G00038610
rosa_rugosa	Rorug05G0197400 Rorug05G0467700
rosa_samantha	Rh5AG282500 Rh5BG287400 Rh5BG287900 Rh5BG543400 Rh5CG319100 Rh5CG319700 Rh5CG566700 Rh5DG296200 Rh5DG296800 Rh5DG553300
rosa_wichuraiana	Rw0G001370 Rw5G048370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1316
AccB1I	GGYRCC	1 cut(s)	391
AccBSI	CCGCTC	1 cut(s)	249
AccI	GTMKAC	1 cut(s)	1504
AccII	CGCG	3 cut(s)	239, 338, 571
AccIII	TCCGGA	1 cut(s)	384
AclWI	GGATC	3 cut(s)	193, 376, 389
AcoI	YGGCCR	3 cut(s)	194, 793, 1397
AcsI	RAATTY	1 cut(s)	1050
AcuI	CTGAAG	3 cut(s)	44, 960, 1071
AdeI	CACNNNGTG	1 cut(s)	654
AfiI	CCNNNNNNNGG	3 cut(s)	238, 324, 1142
AflIII	ACRYGT	1 cut(s)	1260
AgsI	TTSAA	2 cut(s)	1157, 1292
AjiI	CACGTC	1 cut(s)	1139
AjnI	CCWGG	1 cut(s)	218
AluBI	AGCT	9 cut(s)	324, 360, 604, 743, 962, 976, 1040, 1085, 1203
AluI	AGCT	9 cut(s)	324, 360, 604, 743, 962, 976, 1040, 1085, 1203
Alw21I	GWGCWC	3 cut(s)	362, 650, 1318
Alw26I	GTCTC	3 cut(s)	341, 1097, 1334
Alw44I	GTGCAC	1 cut(s)	646
AlwI	GGATC	3 cut(s)	193, 376, 389
Aor13HI	TCCGGA	1 cut(s)	384
AoxI	GGCC	6 cut(s)	194, 258, 770, 793, 1284, 1397
ApaLI	GTGCAC	1 cut(s)	646
ApeKI	GCWGC	4 cut(s)	321, 1040, 1066, 1383
ApoI	RAATTY	1 cut(s)	1050
ArsI	GACNNNNNNTTYG	2 cut(s)	1167, 1199
AseI	ATTAAT	1 cut(s)	1449
AspLEI	GCGC	1 cut(s)	338
AspS9I	GGNCC	4 cut(s)	222, 869, 1284, 1512
AsuC2I	CCSGG	2 cut(s)	287, 1283
AsuHPI	GGTGA	5 cut(s)	271, 415, 587, 691, 891
AsuII	TTCGAA	1 cut(s)	478
AvaII	GGWCC	3 cut(s)	222, 869, 1512
AxyI	CCTNAGG	1 cut(s)	353
BaeGI	GKGCMC	2 cut(s)	630, 650
BalI	TGGCCA	1 cut(s)	795
BamHI	GGATCC	1 cut(s)	381
BanI	GGYRCC	1 cut(s)	391
BanII	GRGCYC	2 cut(s)	362, 936
BarI	GAAGNNNNNNTAC	2 cut(s)	1110, 1142
BauI	CACGAG	1 cut(s)	13
Bbv12I	GWGCWC	3 cut(s)	362, 650, 1318
BbvCI	CCTCAGC	1 cut(s)	1496
BbvI	GCAGC	4 cut(s)	333, 1027, 1078, 1395
BccI	CCATC	2 cut(s)	382, 785
BceAI	ACGGC	4 cut(s)	289, 1098, 1412, 1485
BcgI	CGANNNNNNTGC	2 cut(s)	1245, 1279
BciT130I	CCWGG	1 cut(s)	220
BcnI	CCSGG	2 cut(s)	287, 1283
BcoDI	GTCTC	3 cut(s)	341, 1097, 1334
BfaI	CTAG	2 cut(s)	765, 840
BfuAI	ACCTGC	1 cut(s)	1316
BisI	GCNGC	6 cut(s)	322, 421, 569, 1041, 1067, 1384
BlsI	GCNGC	6 cut(s)	323, 422, 570, 1042, 1068, 1385
Bme1390I	CCNGG	3 cut(s)	220, 287, 1283
Bme18I	GGWCC	3 cut(s)	222, 869, 1512
BmgBI	CACGTC	1 cut(s)	1139
BmgT120I	GGNCC	4 cut(s)	222, 869, 1284, 1512
BmiI	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 666, 1514
BmrFI	CCNGG	3 cut(s)	220, 287, 1283
BmrI	ACTGGG	1 cut(s)	1414
BmsI	GCATC	3 cut(s)	1141, 1180, 1285
BmuI	ACTGGG	1 cut(s)	1414
BplI	GAGNNNNNCTC	2 cut(s)	233, 265
BpmI	CTGGAG	1 cut(s)	1391
Bpu10I	CCTNAGC	1 cut(s)	1496
Bpu14I	TTCGAA	1 cut(s)	478
BpuEI	CTTGAG	1 cut(s)	284
BpuMI	CCSGG	2 cut(s)	287, 1283
BsaBI	GATNNNNATC	1 cut(s)	413
BsaI	GGTCTC	3 cut(s)	341, 1097, 1334
BsaJI	CCNNGG	4 cut(s)	191, 218, 1362, 1516
BsaWI	WCCGGW	2 cut(s)	330, 384
BsaXI	ACNNNNNCTCC	2 cut(s)	449, 479
Bsc4I	CCNNNNNNNGG	3 cut(s)	238, 324, 1142
Bse118I	RCCGGY	1 cut(s)	768
Bse1I	ACTGG	4 cut(s)	760, 872, 1055, 1420
Bse21I	CCTNAGG	1 cut(s)	353
Bse3DI	GCAATG	1 cut(s)	1349
Bse8I	GATNNNNATC	1 cut(s)	413
BseAI	TCCGGA	1 cut(s)	384
BseBI	CCWGG	1 cut(s)	220
BseDI	CCNNGG	4 cut(s)	191, 218, 1362, 1516
BseGI	GGATG	3 cut(s)	393, 442, 1132
BseJI	GATNNNNATC	1 cut(s)	413
BseLI	CCNNNNNNNGG	3 cut(s)	238, 324, 1142
BseMI	GCAATG	1 cut(s)	1349
BseMII	CTCAG	5 cut(s)	344, 642, 1008, 1499, 1510
BseNI	ACTGG	4 cut(s)	760, 872, 1055, 1420
BseRI	GAGGAG	8 cut(s)	287, 370, 470, 473, 476, 534, 539, 677
BseSI	GKGCMC	2 cut(s)	630, 650
BseXI	GCAGC	4 cut(s)	333, 1027, 1078, 1395
BseYI	CCCAGC	2 cut(s)	629, 1203
BsgI	GTGCAG	3 cut(s)	951, 990, 1344
Bsh1236I	CGCG	3 cut(s)	239, 338, 571
Bsh1285I	CGRYCG	1 cut(s)	417
BshFI	GGCC	6 cut(s)	196, 260, 772, 795, 1286, 1399
BshNI	GGYRCC	1 cut(s)	391
BsiEI	CGRYCG	1 cut(s)	417
BsiHKAI	GWGCWC	3 cut(s)	362, 650, 1318
BsiSI	CCGG	8 cut(s)	286, 318, 331, 385, 395, 470, 769, 1282
BslI	CCNNNNNNNGG	3 cut(s)	238, 324, 1142
BsmAI	GTCTC	3 cut(s)	341, 1097, 1334
BsmI	GAATGC	1 cut(s)	1229
BsnI	GGCC	6 cut(s)	196, 260, 772, 795, 1286, 1399
Bso31I	GGTCTC	3 cut(s)	341, 1097, 1334
Bsp119I	TTCGAA	1 cut(s)	478
Bsp1286I	GDGCHC	5 cut(s)	362, 630, 650, 936, 1318
Bsp13I	TCCGGA	1 cut(s)	384
Bsp143I	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
Bsp19I	CCATGG	1 cut(s)	191
BspANI	GGCC	6 cut(s)	196, 260, 772, 795, 1286, 1399
BspCNI	CTCAG	5 cut(s)	345, 643, 1009, 1500, 1509
BspEI	TCCGGA	1 cut(s)	384
BspFNI	CGCG	3 cut(s)	239, 338, 571
BspLI	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 666, 1514
BspMI	ACCTGC	1 cut(s)	1316
BspPI	GGATC	3 cut(s)	193, 376, 389
BspT104I	TTCGAA	1 cut(s)	478
BspT107I	GGYRCC	1 cut(s)	391
BspTNI	GGTCTC	3 cut(s)	341, 1097, 1334
BsrBI	CCGCTC	1 cut(s)	249
BsrDI	GCAATG	1 cut(s)	1349
BsrFI	RCCGGY	1 cut(s)	768
BsrI	ACTGG	4 cut(s)	760, 872, 1055, 1420
BssAI	RCCGGY	1 cut(s)	768
BssECI	CCNNGG	4 cut(s)	191, 218, 1362, 1516
BssMI	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
BssNAI	GTATAC	1 cut(s)	1505
BssSI	CACGAG	1 cut(s)	13
BssT1I	CCWWGG	2 cut(s)	191, 1516
Bst1107I	GTATAC	1 cut(s)	1505
Bst2BI	CACGAG	1 cut(s)	13
Bst2UI	CCWGG	1 cut(s)	220
Bst4CI	ACNGT	5 cut(s)	485, 687, 1014, 1145, 1363
Bst6I	CTCTTC	1 cut(s)	47
BstBI	TTCGAA	1 cut(s)	478
BstC8I	GCNNGC	2 cut(s)	770, 1083
BstDEI	CTNAG	7 cut(s)	186, 353, 651, 1017, 1237, 1496, 1508
BstDSI	CCRYGG	2 cut(s)	191, 1362
BstF5I	GGATG	3 cut(s)	393, 442, 1132
BstFNI	CGCG	3 cut(s)	239, 338, 571
BstHHI	GCGC	1 cut(s)	338
BstKTI	GATC	8 cut(s)	30, 157, 201, 295, 384, 417, 609, 1377
BstMAI	GTCTC	3 cut(s)	341, 1097, 1334
BstMBI	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
BstMCI	CGRYCG	1 cut(s)	417
BstMWI	GCNNNNNNNGC	6 cut(s)	282, 342, 366, 765, 1322, 1415
BstNI	CCWGG	1 cut(s)	220
BstNSI	RCATGY	1 cut(s)	1264
BstSCI	CCNGG	3 cut(s)	218, 285, 1281
BstSLI	GKGCMC	2 cut(s)	630, 650
BstUI	CGCG	3 cut(s)	239, 338, 571
BstV1I	GCAGC	4 cut(s)	333, 1027, 1078, 1395
BstX2I	RGATCY	1 cut(s)	381
BstXI	CCANNNNNNTGG	1 cut(s)	978
BstYI	RGATCY	1 cut(s)	381
BstZ17I	GTATAC	1 cut(s)	1505
Bsu36I	CCTNAGG	1 cut(s)	353
BsuRI	GGCC	6 cut(s)	196, 260, 772, 795, 1286, 1399
BtgI	CCRYGG	2 cut(s)	191, 1362
BtrI	CACGTC	1 cut(s)	1139
BtsCI	GGATG	3 cut(s)	393, 442, 1132
BtsI	GCAGTG	1 cut(s)	550
BtsIMutI	CAGTG	7 cut(s)	550, 648, 650, 753, 936, 1062, 1427
BveI	ACCTGC	1 cut(s)	1316
Cac8I	GCNNGC	2 cut(s)	770, 1083
CfoI	GCGC	1 cut(s)	338
Cfr10I	RCCGGY	1 cut(s)	768
Cfr13I	GGNCC	4 cut(s)	222, 869, 1284, 1512
CspCI	CAANNNNNGTGG	2 cut(s)	487, 522
CviAII	CATG	8 cut(s)	192, 776, 822, 887, 921, 1261, 1319, 1442
DdeI	CTNAG	7 cut(s)	186, 353, 651, 1017, 1237, 1496, 1508
DpnI	GATC	8 cut(s)	29, 156, 200, 294, 383, 416, 608, 1376
DpnII	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
DraIII	CACNNNGTG	1 cut(s)	654
EaeI	YGGCCR	3 cut(s)	194, 793, 1397
Eam1104I	CTCTTC	1 cut(s)	47
EarI	CTCTTC	1 cut(s)	47
Ecl136II	GAGCTC	1 cut(s)	360
Eco130I	CCWWGG	2 cut(s)	191, 1516
Eco147I	AGGCCT	1 cut(s)	260
Eco24I	GRGCYC	2 cut(s)	362, 936
Eco31I	GGTCTC	3 cut(s)	341, 1097, 1334
Eco47I	GGWCC	3 cut(s)	222, 869, 1512
Eco53kI	GAGCTC	1 cut(s)	360
Eco57I	CTGAAG	3 cut(s)	44, 960, 1071
Eco81I	CCTNAGG	1 cut(s)	353
EcoICRI	GAGCTC	1 cut(s)	360
EcoO109I	RGGNCCY	1 cut(s)	1512
EcoRI	GAATTC	1 cut(s)	1050
EcoRII	CCWGG	1 cut(s)	218
EcoT14I	CCWWGG	2 cut(s)	191, 1516
EcoT38I	GRGCYC	2 cut(s)	362, 936
ErhI	CCWWGG	2 cut(s)	191, 1516
FaeI	CATG	8 cut(s)	195, 779, 825, 890, 924, 1264, 1322, 1445
FatI	CATG	8 cut(s)	191, 775, 821, 886, 920, 1260, 1318, 1441
FauI	CCCGC	2 cut(s)	290, 1450
FblI	GTMKAC	1 cut(s)	1504
Fnu4HI	GCNGC	6 cut(s)	322, 421, 569, 1041, 1067, 1384
FokI	GGATG	3 cut(s)	400, 449, 1119
FriOI	GRGCYC	2 cut(s)	362, 936
Fsp4HI	GCNGC	6 cut(s)	322, 421, 569, 1041, 1067, 1384
FspBI	CTAG	2 cut(s)	765, 840
GlaI	GCGC	1 cut(s)	337
GluI	GCNGC	6 cut(s)	322, 421, 569, 1041, 1067, 1384
GsaI	CCCAGC	2 cut(s)	633, 1207
GsuI	CTGGAG	1 cut(s)	1391
HaeIII	GGCC	6 cut(s)	196, 260, 772, 795, 1286, 1399
HapII	CCGG	8 cut(s)	286, 318, 331, 385, 395, 470, 769, 1282
HhaI	GCGC	1 cut(s)	338
Hin1II	CATG	8 cut(s)	195, 779, 825, 890, 924, 1264, 1322, 1445
Hin6I	GCGC	1 cut(s)	336
HinP1I	GCGC	1 cut(s)	336
HindIII	AAGCTT	1 cut(s)	1083
HinfI	GANTC	5 cut(s)	314, 616, 750, 1157, 1213
HpaII	CCGG	8 cut(s)	286, 318, 331, 385, 395, 470, 769, 1282
HphI	GGTGA	5 cut(s)	271, 415, 587, 691, 891
Hpy166II	GTNNAC	3 cut(s)	648, 1243, 1505
Hpy188I	TCNGA	1 cut(s)	1018
Hpy188III	TCNNGA	6 cut(s)	22, 385, 554, 747, 1292, 1370
Hpy8I	GTNNAC	3 cut(s)	648, 1243, 1505
HpyCH4III	ACNGT	5 cut(s)	485, 687, 1014, 1145, 1363
HpyCH4IV	ACGT	1 cut(s)	1138
HpyCH4V	TGCA	9 cut(s)	648, 698, 920, 968, 1007, 1227, 1256, 1325, 1349
HpyF10VI	GCNNNNNNNGC	6 cut(s)	282, 342, 366, 765, 1322, 1415
HpyF3I	CTNAG	7 cut(s)	186, 353, 651, 1017, 1237, 1496, 1508
HpySE526I	ACGT	1 cut(s)	1138
Hsp92II	CATG	8 cut(s)	195, 779, 825, 890, 924, 1264, 1322, 1445
HspAI	GCGC	1 cut(s)	336
Kpn2I	TCCGGA	1 cut(s)	384
KroI	GCCGGC	1 cut(s)	768
KroNI	GCCGGC	1 cut(s)	770
Kzo9I	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
LmnI	GCTCC	6 cut(s)	24, 254, 357, 601, 664, 959
Lsp1109I	GCAGC	4 cut(s)	333, 1027, 1078, 1395
LweI	GCATC	3 cut(s)	1141, 1180, 1285
MaeI	CTAG	2 cut(s)	765, 840
MaeII	ACGT	1 cut(s)	1138
MaeIII	GTNAC	3 cut(s)	679, 751, 1139
MalI	GATC	8 cut(s)	29, 156, 200, 294, 383, 416, 608, 1376
MbiI	CCGCTC	1 cut(s)	249
MboI	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
MboII	GAAGA	6 cut(s)	34, 37, 418, 827, 953, 1130
MfeI	CAATTG	1 cut(s)	809
MflI	RGATCY	1 cut(s)	381
MhlI	GDGCHC	5 cut(s)	362, 630, 650, 936, 1318
MlsI	TGGCCA	1 cut(s)	795
MluCI	AATT	3 cut(s)	809, 1050, 1413
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	1 cut(s)	759
MmeI	TCCRAC	1 cut(s)	1413
Mox20I	TGGCCA	1 cut(s)	795
MroI	TCCGGA	1 cut(s)	384
MroNI	GCCGGC	1 cut(s)	768
MscI	TGGCCA	1 cut(s)	795
MseI	TTAA	5 cut(s)	927, 1166, 1196, 1412, 1449
MslI	CAYNNNNRTG	2 cut(s)	990, 1265
Msp20I	TGGCCA	1 cut(s)	795
MspA1I	CMGCKG	1 cut(s)	324
MspI	CCGG	8 cut(s)	286, 318, 331, 385, 395, 470, 769, 1282
MspR9I	CCNGG	3 cut(s)	220, 287, 1283
MunI	CAATTG	1 cut(s)	809
Mva1269I	GAATGC	1 cut(s)	1229
MvaI	CCWGG	1 cut(s)	220
MvnI	CGCG	3 cut(s)	239, 338, 571
MwoI	GCNNNNNNNGC	6 cut(s)	282, 342, 366, 765, 1322, 1415
NaeI	GCCGGC	1 cut(s)	770
NciI	CCSGG	2 cut(s)	287, 1283
NcoI	CCATGG	1 cut(s)	191
NdeII	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
NgoMIV	GCCGGC	1 cut(s)	768
NlaIII	CATG	8 cut(s)	195, 779, 825, 890, 924, 1264, 1322, 1445
NlaIV	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 666, 1514
NmuCI	GTSAC	3 cut(s)	679, 751, 1139
NspI	RCATGY	1 cut(s)	1264
NspV	TTCGAA	1 cut(s)	478
PceI	AGGCCT	1 cut(s)	260
PciI	ACATGT	1 cut(s)	1260
PctI	GAATGC	1 cut(s)	1229
PdiI	GCCGGC	1 cut(s)	770
PfeI	GAWTC	4 cut(s)	314, 616, 1157, 1213
PkrI	GCNGC	6 cut(s)	323, 422, 570, 1042, 1068, 1385
Ple19I	CGATCG	1 cut(s)	417
PleI	GAGTC	1 cut(s)	758
PpsI	GAGTC	1 cut(s)	758
PpuMI	RGGWCCY	1 cut(s)	1512
PscI	ACATGT	1 cut(s)	1260
PshBI	ATTAAT	1 cut(s)	1449
Psp124BI	GAGCTC	1 cut(s)	362
Psp5II	RGGWCCY	1 cut(s)	1512
Psp6I	CCWGG	1 cut(s)	218
PspFI	CCCAGC	2 cut(s)	629, 1203
PspGI	CCWGG	1 cut(s)	218
PspN4I	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 666, 1514
PspPI	GGNCC	4 cut(s)	222, 869, 1284, 1512
PspPPI	RGGWCCY	1 cut(s)	1512
PsuI	RGATCY	1 cut(s)	381
PvuI	CGATCG	1 cut(s)	417
PvuII	CAGCTG	1 cut(s)	324
RseI	CAYNNNNRTG	2 cut(s)	990, 1265
SacI	GAGCTC	1 cut(s)	362
SaqAI	TTAA	5 cut(s)	927, 1166, 1196, 1412, 1449
SatI	GCNGC	6 cut(s)	322, 421, 569, 1041, 1067, 1384
Sau3AI	GATC	8 cut(s)	27, 154, 198, 292, 381, 414, 606, 1374
Sau96I	GGNCC	4 cut(s)	222, 869, 1284, 1512
SchI	GAGTC	1 cut(s)	759
ScrFI	CCNGG	3 cut(s)	220, 287, 1283
SduI	GDGCHC	5 cut(s)	362, 630, 650, 936, 1318
SfaNI	GCATC	3 cut(s)	1141, 1180, 1285
SfuI	TTCGAA	1 cut(s)	478
SinI	GGWCC	3 cut(s)	222, 869, 1512
SmiMI	CAYNNNNRTG	2 cut(s)	990, 1265
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
Sse9I	AATT	3 cut(s)	809, 1050, 1413
SseBI	AGGCCT	1 cut(s)	260
SspMI	CTAG	2 cut(s)	765, 840
SstI	GAGCTC	1 cut(s)	362
StuI	AGGCCT	1 cut(s)	260
StyD4I	CCNGG	3 cut(s)	218, 285, 1281
StyI	CCWWGG	2 cut(s)	191, 1516
TaaI	ACNGT	5 cut(s)	485, 687, 1014, 1145, 1363
TaiI	ACGT	1 cut(s)	1141
TaqI	TCGA	6 cut(s)	291, 413, 478, 614, 1211, 1265
TasI	AATT	3 cut(s)	809, 1050, 1413
TauI	GCSGC	2 cut(s)	423, 571
TfiI	GAWTC	4 cut(s)	314, 616, 1157, 1213
Tru1I	TTAA	5 cut(s)	927, 1166, 1196, 1412, 1449
Tru9I	TTAA	5 cut(s)	927, 1166, 1196, 1412, 1449
TscAI	CASTG	7 cut(s)	550, 650, 655, 760, 943, 1062, 1427
TseFI	GTSAC	3 cut(s)	679, 751, 1139
TseI	GCWGC	4 cut(s)	321, 1040, 1066, 1383
Tsp45I	GTSAC	3 cut(s)	679, 751, 1139
TspDTI	ATGAA	3 cut(s)	17, 927, 1283
TspGWI	ACGGA	3 cut(s)	734, 1260, 1464
TspRI	CASTG	7 cut(s)	550, 650, 655, 760, 943, 1062, 1427
VneI	GTGCAC	1 cut(s)	646
VpaK11BI	GGWCC	3 cut(s)	222, 869, 1512
VspI	ATTAAT	1 cut(s)	1449
XapI	RAATTY	1 cut(s)	1050
XceI	RCATGY	1 cut(s)	1264
XmiI	GTMKAC	1 cut(s)	1504
XspI	CTAG	2 cut(s)	765, 840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.