Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009443.1

Orthogroup ID

OG0005493

Physical Location & Seq

Genomic Coordinates Reverse (-)

14836 .. 17391

Gene Structure 2556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009443.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

atgaacaaaaactcgtggctcctaaagatcgtggtgttcctcttcgccctaaactcgctctctctctgcctctacttcacatcccactccaaaaccctcacccctccgccccacaacccccaccctcaagtcaaccgcctccccctaacagatcaaacccaccgccacagttaccgcttctctaagccatggtcgatcctcccctcctacctcccctggtcccagaccccaaacgcggagttccgctcctgcgaggcctacttcggcaacggcttcacccgccgcgtcgatctcctcaagcccactaaagattccggcagctggttccgctgcgcgttcagccagacgctgaggagctccgtgtgcgagggaggggggatccggatggtgccggagagggtcaagatgtcgatcggcggcgaggttttggaggatgtgattgggagaggggaggaggaggagttgccggagtttcgaaacggtgcgtttgaggtcgatggtggggttggtggaggaggagaggagagcgggcttgtgagtagagagtttcttgatgagtatgtgccgcgtggtgagattgggaagcatactatgagggagctgatcgggtcgattcgggttgtgcccagtaaagagtttcagtgcagtgggtggattgaggagccaacgcttctggtgacacggtttgagtatgcaaatgttttccacacattcacggattggtatagcggttacgtggcttccagagtcactggcttacctagccggcctcatgttgtctttgtagatggccattgtaggacacaattggaagaaacatggaaagcgttgttctctagcattagatatgcgaaaaactttagtggtccagtttgttttcgtcatgctattatttcacctcttggatatgaaactgcatggtttaaggggctcactgaagatatagcgtgtgagggagcttctgcaccagagctgtggcaacaccctgatgacaagaaaactgcacggctgtctgagtttggagaaatgattagagctgcttttggaattccagtgcgtaggcagcgtattgagaagcaagcctcaggtctcaatatcctttttgttcgccgtgaagattatctaccgcatccacgtcatggtggtaaagttgaatccaggttaagcaacgaacaagaagtctttgatgccttaaagagctgggtgtcgaatcacaaggaatgcaaaataaacttagtgaacggattgtttgcacacatgtcaatgaaagaacaagtccgggccattcaagatgcttctgttattattggtgctcatggtgcaggtctcacgcatatagtatctgcattgccgaaaaccgtggttctggagatcattagcagccaatatagacggccacattttgctttaattgcccagtggaaagggttggaatatcatgccattaatcttgcgggtttgtatgcctctccgacagttgttattgacaaccttagccgtatactgaggacccttgggtgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005797 GO:0006464 GO:0006486 GO:0006487 GO:0006605 GO:0006612 GO:0006620 GO:0006807 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016740 GO:0016757 GO:0016763 GO:0019538 GO:0031090 GO:0031204 GO:0031984 GO:0031985 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0035252 GO:0036211 GO:0042285 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046907 GO:0050513 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070085 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0098588 GO:0098791 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00513 ko01100 map00513 map01100

Pfam Domains

Protein Families

DUF563

Protein Analysis

507

Amino Acids

57.12

Weight (kDa)

8.44

Isoelectric Point (pI)

47.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55500
fragaria_vesca	FvH4_3g23790
malus_domestica	MD03G1190200.v1.1 MD11G1206700.v1.1
prunus_persica	Prupe.4G229800_v2.0.a1 Prupe.4G229800_v2.0.a1
pyrus_communis	pycom03g14300 pycom11g17980
rosa_chinensis	RchiOBHm_Chr5g0041921 RchiOBHm_Chr5g0041971 RchiOBHm_Chr5g0080011
rosa_laevigata	RLG00000034106 RLG00000036844
rosa_multiflora	Rmu_sc0009443.1_g000005
rosa_roxburghii	Rroxscaffold_1G00038610
rosa_rugosa	Rorug05G0197400 Rorug05G0467700
rosa_samantha	Rh5AG282500 Rh5BG287400 Rh5BG287900 Rh5BG543400 Rh5CG319100 Rh5CG319700 Rh5CG566700 Rh5DG296200 Rh5DG296800 Rh5DG553300
rosa_wichuraiana	Rw0G001370 Rw5G048370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1313
AccB1I	GGYRCC	1 cut(s)	388
AccB7I	CCANNNNNTGG	1 cut(s)	1139
AccBSI	CCGCTC	2 cut(s)	246, 528
AccI	GTMKAC	1 cut(s)	1501
AccII	CGCG	4 cut(s)	236, 285, 335, 568
AccIII	TCCGGA	1 cut(s)	381
AclWI	GGATC	3 cut(s)	190, 373, 386
AcoI	YGGCCR	2 cut(s)	790, 1394
AcsI	RAATTY	1 cut(s)	1047
AcuI	CTGAAG	1 cut(s)	957
AfiI	CCNNNNNNNGG	3 cut(s)	235, 321, 1139
AflIII	ACRYGT	1 cut(s)	1257
AgsI	TTSAA	2 cut(s)	1154, 1289
AjiI	CACGTC	1 cut(s)	1136
AjnI	CCWGG	2 cut(s)	215, 1157
AluBI	AGCT	7 cut(s)	321, 357, 601, 959, 973, 1037, 1200
AluI	AGCT	7 cut(s)	321, 357, 601, 959, 973, 1037, 1200
Alw21I	GWGCWC	2 cut(s)	359, 1315
Alw26I	GTCTC	2 cut(s)	1094, 1331
AlwI	GGATC	3 cut(s)	190, 373, 386
AlwNI	CAGNNNCTG	1 cut(s)	349
Aor13HI	TCCGGA	1 cut(s)	381
AoxI	GGCC	5 cut(s)	255, 767, 790, 1281, 1394
ApeKI	GCWGC	5 cut(s)	318, 330, 1037, 1063, 1380
ApoI	RAATTY	1 cut(s)	1047
ArsI	GACNNNNNNTTYG	2 cut(s)	1164, 1196
AseI	ATTAAT	1 cut(s)	1446
AspLEI	GCGC	1 cut(s)	335
AspS9I	GGNCC	4 cut(s)	219, 866, 1281, 1509
AsuC2I	CCSGG	1 cut(s)	1280
AsuHPI	GGTGA	5 cut(s)	91, 268, 584, 688, 888
AsuII	TTCGAA	1 cut(s)	475
AvaII	GGWCC	3 cut(s)	219, 866, 1509
AxyI	CCTNAGG	1 cut(s)	1084
BaeGI	GKGCMC	1 cut(s)	627
BalI	TGGCCA	1 cut(s)	792
BamHI	GGATCC	1 cut(s)	378
BanI	GGYRCC	1 cut(s)	388
BanII	GRGCYC	2 cut(s)	359, 933
BarI	GAAGNNNNNNTAC	2 cut(s)	1107, 1139
BauI	CACGAG	1 cut(s)	13
Bbv12I	GWGCWC	2 cut(s)	359, 1315
BbvCI	CCTCAGC	1 cut(s)	350
BbvI	GCAGC	5 cut(s)	317, 330, 1024, 1075, 1392
BccI	CCATC	3 cut(s)	379, 491, 782
BceAI	ACGGC	5 cut(s)	286, 1022, 1095, 1409, 1482
BciT130I	CCWGG	2 cut(s)	217, 1159
BcnI	CCSGG	1 cut(s)	1280
BcoDI	GTCTC	2 cut(s)	1094, 1331
BfaI	CTAG	2 cut(s)	762, 837
BfuAI	ACCTGC	1 cut(s)	1313
BisI	GCNGC	8 cut(s)	283, 319, 331, 418, 566, 1038, 1064, 1381
BlsI	GCNGC	8 cut(s)	284, 320, 332, 419, 567, 1039, 1065, 1382
Bme1390I	CCNGG	3 cut(s)	217, 1159, 1280
Bme18I	GGWCC	3 cut(s)	219, 866, 1509
BmgBI	CACGTC	1 cut(s)	1136
BmgT120I	GGNCC	4 cut(s)	219, 866, 1281, 1509
BmiI	GGNNCC	7 cut(s)	20, 221, 326, 380, 390, 663, 1511
BmrFI	CCNGG	3 cut(s)	217, 1159, 1280
BmrI	ACTGGG	2 cut(s)	621, 1411
BmsI	GCATC	3 cut(s)	1138, 1177, 1282
BmuI	ACTGGG	2 cut(s)	621, 1411
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	1 cut(s)	1388
Bpu10I	CCTNAGC	2 cut(s)	350, 1493
Bpu14I	TTCGAA	1 cut(s)	475
BpuEI	CTTGAG	2 cut(s)	111, 281
BpuMI	CCSGG	1 cut(s)	1280
BsaAI	YACGTR	1 cut(s)	736
BsaBI	GATNNNNATC	1 cut(s)	410
BsaI	GGTCTC	2 cut(s)	1094, 1331
BsaJI	CCNNGG	4 cut(s)	188, 215, 1359, 1513
BsaWI	WCCGGW	1 cut(s)	381
BsaXI	ACNNNNNCTCC	2 cut(s)	446, 476
Bsc4I	CCNNNNNNNGG	3 cut(s)	235, 321, 1139
Bse118I	RCCGGY	1 cut(s)	765
Bse1I	ACTGG	5 cut(s)	627, 757, 869, 1052, 1417
Bse21I	CCTNAGG	1 cut(s)	1084
Bse3DI	GCAATG	1 cut(s)	1346
Bse8I	GATNNNNATC	1 cut(s)	410
BseAI	TCCGGA	1 cut(s)	381
BseBI	CCWGG	2 cut(s)	217, 1159
BseDI	CCNNGG	4 cut(s)	188, 215, 1359, 1513
BseGI	GGATG	4 cut(s)	80, 390, 439, 1129
BseJI	GATNNNNATC	1 cut(s)	410
BseLI	CCNNNNNNNGG	3 cut(s)	235, 321, 1139
BseMI	GCAATG	1 cut(s)	1346
BseMII	CTCAG	4 cut(s)	341, 1005, 1098, 1496
BseNI	ACTGG	5 cut(s)	627, 757, 869, 1052, 1417
BseRI	GAGGAG	9 cut(s)	284, 367, 467, 470, 473, 528, 531, 536, 674
BseSI	GKGCMC	1 cut(s)	627
BseXI	GCAGC	5 cut(s)	317, 330, 1024, 1075, 1392
BseYI	CCCAGC	1 cut(s)	1200
BsgI	GTGCAG	4 cut(s)	664, 948, 987, 1341
Bsh1236I	CGCG	4 cut(s)	236, 285, 335, 568
Bsh1285I	CGRYCG	1 cut(s)	414
BshFI	GGCC	5 cut(s)	257, 769, 792, 1283, 1396
BshNI	GGYRCC	1 cut(s)	388
BsiEI	CGRYCG	1 cut(s)	414
BsiHKAI	GWGCWC	2 cut(s)	359, 1315
BsiSI	CCGG	6 cut(s)	315, 382, 392, 467, 766, 1279
BslFI	GGGAC	1 cut(s)	205
BslI	CCNNNNNNNGG	3 cut(s)	235, 321, 1139
BsmAI	GTCTC	2 cut(s)	1094, 1331
BsmFI	GGGAC	1 cut(s)	205
BsmI	GAATGC	1 cut(s)	1226
BsnI	GGCC	5 cut(s)	257, 769, 792, 1283, 1396
Bso31I	GGTCTC	2 cut(s)	1094, 1331
Bsp119I	TTCGAA	1 cut(s)	475
Bsp1286I	GDGCHC	4 cut(s)	359, 627, 933, 1315
Bsp13I	TCCGGA	1 cut(s)	381
Bsp143I	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
Bsp19I	CCATGG	1 cut(s)	188
BspANI	GGCC	5 cut(s)	257, 769, 792, 1283, 1396
BspCNI	CTCAG	4 cut(s)	342, 1006, 1097, 1497
BspEI	TCCGGA	1 cut(s)	381
BspFNI	CGCG	4 cut(s)	236, 285, 335, 568
BspLI	GGNNCC	7 cut(s)	20, 221, 326, 380, 390, 663, 1511
BspMI	ACCTGC	1 cut(s)	1313
BspPI	GGATC	3 cut(s)	190, 373, 386
BspT104I	TTCGAA	1 cut(s)	475
BspT107I	GGYRCC	1 cut(s)	388
BspTNI	GGTCTC	2 cut(s)	1094, 1331
BsrBI	CCGCTC	2 cut(s)	246, 528
BsrDI	GCAATG	1 cut(s)	1346
BsrFI	RCCGGY	1 cut(s)	765
BsrI	ACTGG	5 cut(s)	627, 757, 869, 1052, 1417
BssAI	RCCGGY	1 cut(s)	765
BssECI	CCNNGG	4 cut(s)	188, 215, 1359, 1513
BssMI	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
BssNAI	GTATAC	1 cut(s)	1502
BssSI	CACGAG	1 cut(s)	13
BssT1I	CCWWGG	2 cut(s)	188, 1513
Bst1107I	GTATAC	1 cut(s)	1502
Bst2BI	CACGAG	1 cut(s)	13
Bst2UI	CCWGG	2 cut(s)	217, 1159
Bst4CI	ACNGT	5 cut(s)	170, 482, 684, 1360, 1477
Bst6I	CTCTTC	1 cut(s)	47
BstBAI	YACGTR	1 cut(s)	736
BstBI	TTCGAA	1 cut(s)	475
BstC8I	GCNNGC	3 cut(s)	530, 767, 1080
BstDEI	CTNAG	7 cut(s)	183, 350, 1014, 1084, 1234, 1493, 1505
BstDSI	CCRYGG	2 cut(s)	188, 1359
BstF5I	GGATG	4 cut(s)	80, 390, 439, 1129
BstFNI	CGCG	4 cut(s)	236, 285, 335, 568
BstHHI	GCGC	1 cut(s)	335
BstKTI	GATC	8 cut(s)	30, 154, 198, 292, 381, 414, 606, 1374
BstMAI	GTCTC	2 cut(s)	1094, 1331
BstMBI	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
BstMCI	CGRYCG	1 cut(s)	414
BstMWI	GCNNNNNNNGC	8 cut(s)	279, 327, 339, 363, 762, 1063, 1319, 1412
BstNI	CCWGG	2 cut(s)	217, 1159
BstNSI	RCATGY	1 cut(s)	1261
BstSCI	CCNGG	3 cut(s)	215, 1157, 1278
BstSLI	GKGCMC	1 cut(s)	627
BstUI	CGCG	4 cut(s)	236, 285, 335, 568
BstV1I	GCAGC	5 cut(s)	317, 330, 1024, 1075, 1392
BstX2I	RGATCY	1 cut(s)	378
BstXI	CCANNNNNNTGG	1 cut(s)	975
BstYI	RGATCY	1 cut(s)	378
BstZ17I	GTATAC	1 cut(s)	1502
Bsu36I	CCTNAGG	1 cut(s)	1084
BsuRI	GGCC	5 cut(s)	257, 769, 792, 1283, 1396
BtgI	CCRYGG	2 cut(s)	188, 1359
BtrI	CACGTC	1 cut(s)	1136
BtsCI	GGATG	4 cut(s)	80, 390, 439, 1129
BtsI	GCAGTG	1 cut(s)	652
BtsIMutI	CAGTG	6 cut(s)	647, 652, 750, 933, 1059, 1424
BveI	ACCTGC	1 cut(s)	1313
Cac8I	GCNNGC	3 cut(s)	530, 767, 1080
CaiI	CAGNNNCTG	1 cut(s)	349
CfoI	GCGC	1 cut(s)	335
Cfr10I	RCCGGY	1 cut(s)	765
Cfr13I	GGNCC	4 cut(s)	219, 866, 1281, 1509
CseI	GACGC	2 cut(s)	274, 355
CviAII	CATG	9 cut(s)	189, 773, 819, 884, 918, 1139, 1258, 1316, 1439
DdeI	CTNAG	7 cut(s)	183, 350, 1014, 1084, 1234, 1493, 1505
DpnI	GATC	8 cut(s)	29, 153, 197, 291, 380, 413, 605, 1373
DpnII	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
EaeI	YGGCCR	2 cut(s)	790, 1394
Eam1104I	CTCTTC	1 cut(s)	47
EarI	CTCTTC	1 cut(s)	47
EciI	GGCGGA	1 cut(s)	96
Ecl136II	GAGCTC	1 cut(s)	357
Eco130I	CCWWGG	2 cut(s)	188, 1513
Eco147I	AGGCCT	1 cut(s)	257
Eco24I	GRGCYC	2 cut(s)	359, 933
Eco31I	GGTCTC	2 cut(s)	1094, 1331
Eco47I	GGWCC	3 cut(s)	219, 866, 1509
Eco53kI	GAGCTC	1 cut(s)	357
Eco57I	CTGAAG	1 cut(s)	957
Eco81I	CCTNAGG	1 cut(s)	1084
EcoICRI	GAGCTC	1 cut(s)	357
EcoO109I	RGGNCCY	1 cut(s)	1509
EcoRI	GAATTC	1 cut(s)	1047
EcoRII	CCWGG	2 cut(s)	215, 1157
EcoT14I	CCWWGG	2 cut(s)	188, 1513
EcoT38I	GRGCYC	2 cut(s)	359, 933
ErhI	CCWWGG	2 cut(s)	188, 1513
FaeI	CATG	9 cut(s)	192, 776, 822, 887, 921, 1142, 1261, 1319, 1442
FaqI	GGGAC	1 cut(s)	205
FatI	CATG	9 cut(s)	188, 772, 818, 883, 917, 1138, 1257, 1315, 1438
FauI	CCCGC	3 cut(s)	287, 521, 1447
FblI	GTMKAC	1 cut(s)	1501
Fnu4HI	GCNGC	8 cut(s)	283, 319, 331, 418, 566, 1038, 1064, 1381
FokI	GGATG	4 cut(s)	67, 397, 446, 1116
FriOI	GRGCYC	2 cut(s)	359, 933
Fsp4HI	GCNGC	8 cut(s)	283, 319, 331, 418, 566, 1038, 1064, 1381
FspBI	CTAG	2 cut(s)	762, 837
GlaI	GCGC	1 cut(s)	334
GluI	GCNGC	8 cut(s)	283, 319, 331, 418, 566, 1038, 1064, 1381
GsaI	CCCAGC	1 cut(s)	1204
GsuI	CTGGAG	1 cut(s)	1388
HaeIII	GGCC	5 cut(s)	257, 769, 792, 1283, 1396
HapII	CCGG	6 cut(s)	315, 382, 392, 467, 766, 1279
HgaI	GACGC	2 cut(s)	274, 355
HhaI	GCGC	1 cut(s)	335
Hin1II	CATG	9 cut(s)	192, 776, 822, 887, 921, 1142, 1261, 1319, 1442
Hin6I	GCGC	1 cut(s)	333
HinP1I	GCGC	1 cut(s)	333
HincII	GTYRAC	1 cut(s)	133
HindII	GTYRAC	1 cut(s)	133
HinfI	GANTC	5 cut(s)	311, 613, 747, 1154, 1210
HpaII	CCGG	6 cut(s)	315, 382, 392, 467, 766, 1279
HphI	GGTGA	5 cut(s)	91, 268, 584, 688, 888
Hpy166II	GTNNAC	3 cut(s)	133, 1240, 1502
Hpy188I	TCNGA	2 cut(s)	1015, 1473
Hpy188III	TCNNGA	6 cut(s)	382, 403, 551, 744, 1289, 1367
Hpy8I	GTNNAC	3 cut(s)	133, 1240, 1502
Hpy99I	CGWCG	1 cut(s)	290
HpyCH4III	ACNGT	5 cut(s)	170, 482, 684, 1360, 1477
HpyCH4IV	ACGT	2 cut(s)	735, 1135
HpyCH4V	TGCA	9 cut(s)	645, 695, 917, 965, 1004, 1224, 1253, 1322, 1346
HpyF10VI	GCNNNNNNNGC	8 cut(s)	279, 327, 339, 363, 762, 1063, 1319, 1412
HpyF3I	CTNAG	7 cut(s)	183, 350, 1014, 1084, 1234, 1493, 1505
HpySE526I	ACGT	2 cut(s)	735, 1135
Hsp92II	CATG	9 cut(s)	192, 776, 822, 887, 921, 1142, 1261, 1319, 1442
HspAI	GCGC	1 cut(s)	333
Kpn2I	TCCGGA	1 cut(s)	381
KroI	GCCGGC	1 cut(s)	765
KroNI	GCCGGC	1 cut(s)	767
Kzo9I	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
LmnI	GCTCC	7 cut(s)	24, 251, 354, 362, 598, 661, 956
Lsp1109I	GCAGC	5 cut(s)	317, 330, 1024, 1075, 1392
LweI	GCATC	3 cut(s)	1138, 1177, 1282
MaeI	CTAG	2 cut(s)	762, 837
MaeII	ACGT	2 cut(s)	735, 1135
MaeIII	GTNAC	4 cut(s)	170, 676, 731, 748
MalI	GATC	8 cut(s)	29, 153, 197, 291, 380, 413, 605, 1373
MbiI	CCGCTC	2 cut(s)	246, 528
MboI	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
MboII	GAAGA	4 cut(s)	34, 824, 950, 1127
MfeI	CAATTG	1 cut(s)	806
MflI	RGATCY	1 cut(s)	378
MhlI	GDGCHC	4 cut(s)	359, 627, 933, 1315
MlsI	TGGCCA	1 cut(s)	792
MluCI	AATT	3 cut(s)	806, 1047, 1410
MluNI	TGGCCA	1 cut(s)	792
MlyI	GAGTC	1 cut(s)	756
MmeI	TCCRAC	2 cut(s)	1410, 1496
Mox20I	TGGCCA	1 cut(s)	792
MroI	TCCGGA	1 cut(s)	381
MroNI	GCCGGC	1 cut(s)	765
MscI	TGGCCA	1 cut(s)	792
MseI	TTAA	5 cut(s)	924, 1163, 1193, 1409, 1446
MslI	CAYNNNNRTG	2 cut(s)	987, 1262
Msp20I	TGGCCA	1 cut(s)	792
MspA1I	CMGCKG	2 cut(s)	321, 330
MspI	CCGG	6 cut(s)	315, 382, 392, 467, 766, 1279
MspR9I	CCNGG	3 cut(s)	217, 1159, 1280
MunI	CAATTG	1 cut(s)	806
Mva1269I	GAATGC	1 cut(s)	1226
MvaI	CCWGG	2 cut(s)	217, 1159
MvnI	CGCG	4 cut(s)	236, 285, 335, 568
MwoI	GCNNNNNNNGC	8 cut(s)	279, 327, 339, 363, 762, 1063, 1319, 1412
NaeI	GCCGGC	1 cut(s)	767
NciI	CCSGG	1 cut(s)	1280
NcoI	CCATGG	1 cut(s)	188
NdeII	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
NgoMIV	GCCGGC	1 cut(s)	765
NlaIII	CATG	9 cut(s)	192, 776, 822, 887, 921, 1142, 1261, 1319, 1442
NlaIV	GGNNCC	7 cut(s)	20, 221, 326, 380, 390, 663, 1511
NmuCI	GTSAC	2 cut(s)	676, 748
NspI	RCATGY	1 cut(s)	1261
NspV	TTCGAA	1 cut(s)	475
PceI	AGGCCT	1 cut(s)	257
PciI	ACATGT	1 cut(s)	1257
PctI	GAATGC	1 cut(s)	1226
PdiI	GCCGGC	1 cut(s)	767
PfeI	GAWTC	4 cut(s)	311, 613, 1154, 1210
PflMI	CCANNNNNTGG	1 cut(s)	1139
PkrI	GCNGC	8 cut(s)	284, 320, 332, 419, 567, 1039, 1065, 1382
Ple19I	CGATCG	1 cut(s)	414
PleI	GAGTC	1 cut(s)	755
PpsI	GAGTC	1 cut(s)	755
Ppu21I	YACGTR	1 cut(s)	736
PpuMI	RGGWCCY	1 cut(s)	1509
PscI	ACATGT	1 cut(s)	1257
PshBI	ATTAAT	1 cut(s)	1446
Psp124BI	GAGCTC	1 cut(s)	359
Psp5II	RGGWCCY	1 cut(s)	1509
Psp6I	CCWGG	2 cut(s)	215, 1157
PspFI	CCCAGC	1 cut(s)	1200
PspGI	CCWGG	2 cut(s)	215, 1157
PspN4I	GGNNCC	7 cut(s)	20, 221, 326, 380, 390, 663, 1511
PspPI	GGNCC	4 cut(s)	219, 866, 1281, 1509
PspPPI	RGGWCCY	1 cut(s)	1509
PstNI	CAGNNNCTG	1 cut(s)	349
PsuI	RGATCY	1 cut(s)	378
PvuI	CGATCG	1 cut(s)	414
PvuII	CAGCTG	1 cut(s)	321
RseI	CAYNNNNRTG	2 cut(s)	987, 1262
SacI	GAGCTC	1 cut(s)	359
SaqAI	TTAA	5 cut(s)	924, 1163, 1193, 1409, 1446
SatI	GCNGC	8 cut(s)	283, 319, 331, 418, 566, 1038, 1064, 1381
Sau3AI	GATC	8 cut(s)	27, 151, 195, 289, 378, 411, 603, 1371
Sau96I	GGNCC	4 cut(s)	219, 866, 1281, 1509
SchI	GAGTC	1 cut(s)	756
ScrFI	CCNGG	3 cut(s)	217, 1159, 1280
SduI	GDGCHC	4 cut(s)	359, 627, 933, 1315
SfaNI	GCATC	3 cut(s)	1138, 1177, 1282
SfuI	TTCGAA	1 cut(s)	475
SinI	GGWCC	3 cut(s)	219, 866, 1509
SmiMI	CAYNNNNRTG	2 cut(s)	987, 1262
SmlI	CTYRAG	2 cut(s)	126, 296
SmoI	CTYRAG	2 cut(s)	126, 296
Sse9I	AATT	3 cut(s)	806, 1047, 1410
SseBI	AGGCCT	1 cut(s)	257
SspMI	CTAG	2 cut(s)	762, 837
SstI	GAGCTC	1 cut(s)	359
StuI	AGGCCT	1 cut(s)	257
StyD4I	CCNGG	3 cut(s)	215, 1157, 1278
StyI	CCWWGG	2 cut(s)	188, 1513
TaaI	ACNGT	5 cut(s)	170, 482, 684, 1360, 1477
TaiI	ACGT	2 cut(s)	738, 1138
TaqI	TCGA	7 cut(s)	194, 288, 410, 475, 495, 611, 1208
TasI	AATT	3 cut(s)	806, 1047, 1410
TauI	GCSGC	3 cut(s)	285, 420, 568
TfiI	GAWTC	4 cut(s)	311, 613, 1154, 1210
Tru1I	TTAA	5 cut(s)	924, 1163, 1193, 1409, 1446
Tru9I	TTAA	5 cut(s)	924, 1163, 1193, 1409, 1446
TscAI	CASTG	6 cut(s)	647, 652, 757, 940, 1059, 1424
TseFI	GTSAC	2 cut(s)	676, 748
TseI	GCWGC	5 cut(s)	318, 330, 1037, 1063, 1380
Tsp45I	GTSAC	2 cut(s)	676, 748
TspDTI	ATGAA	3 cut(s)	17, 924, 1280
TspGWI	ACGGA	3 cut(s)	349, 731, 1257
TspRI	CASTG	6 cut(s)	647, 652, 757, 940, 1059, 1424
Van91I	CCANNNNNTGG	1 cut(s)	1139
VpaK11BI	GGWCC	3 cut(s)	219, 866, 1509
VspI	ATTAAT	1 cut(s)	1446
XapI	RAATTY	1 cut(s)	1047
XceI	RCATGY	1 cut(s)	1261
XmiI	GTMKAC	1 cut(s)	1501
XspI	CTAG	2 cut(s)	762, 837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.