Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005493

Physical Location & Seq

Genomic Coordinates Reverse (-)

64419132 .. 64421756

Gene Structure 2625 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0467700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGTCTCTCAACGGGGTCAATATAGCTTCTCAAGCCCCTCCAACACTGAATGCCTCTACTGATGCCGATAGTCGACGTTCGGCAAATTTCCATCCCAGTATTTGGGGAGACCAGTTTCTGTCTTGTAACAACACTATGGAAACTAACATAAATGGTGAGCAACATGTCCAACAACTGAAGGAAGAAGTGAAGAGAGTGCTAATGGCTCCGCCAGTTGAAGCTTGTTTGGAAAAACTGGAGTTGATTGATGACATTCAACGCTTGGGCGTGTCTTACCATTTTGAATACGAGATTGACCAAACTATGCAGCAAATTCACGACAATTTTAATGGTTACTGTGATGGTGATCTGCACACTTGTGCTCTTCGTTTTCGCTTGTTGAGGCAGCATGGTTACAATGTTTCATGCGATATGTTCAACAAGTTCGACTACACATCGCTTCACGATGATGTAGTGGGGCTACAAAGCTTGTATGAAGCCACACATCTTAGAGTACGAGGAGAGGATTTTCTAGAAGAAGCACTGACCTTCACCACCACACATCTGGAGTCGCCAGCGCTAGCAAACCGTTTAAGCCCCCCGTTTTCGAAACAAGTAAGGCATGCCTTGAATCAACCACTCCGGAAGGGCTTACCGAGGCTAGAAGCGAGGCACTACATGTCTCTCCACCAGGAACTACACGGATCACGTAACCAAATTTTGCTGAGTTTTGCAAAGCTGGATTTCAACCTGCTCCAACAAGTGCATCAGAAAGAACTAAGTGATATTGCAAGGTGGTGGAAGGAGTTGGACTTTGCTAGCAAGCTACCTTTTGCAAGAGACAGAGTAATCGAGTGCTACTTCTGGATTTTGGGAGTCTACTTTGAGCCTGAGTATTACTTTGCCAGGAGGACACTAACCAAAGTTATTGCCATGACGTCCATTATCGATGACATTTATGATGTGTATGGCACGCTTGAAGAACTAGACCTCTTTACTAGAGCAATTGAGAGGTGGGACATCTCAGCCATGGATGAACTACCGGAGTATATGAAAGTCTGTTACGAGGCACTGTTAGATGTCTATGCTGAAACAGAACAAGAGCTTGCAAGCAAGGGACAATTATATCGTATCAATTACGCAAAAGAAGCGATGAAGAGACAGGTTAGGGCATACCATGCTGAAGCAAAATGGTTTCACAAGAACTACACACCAACAATGGATGAATACATGGAAGTAGCCCTTGTCACTTCAGCCTACTCAATGCTAGCAACCACATCCTTTGTTGGAATGGGAGATATCGTTACAAAAGACTCCTTTGAGTGGATCTTCAGTGACCCTAAGATTGTAAAGGCTTCAGCAGTAGTTTGCAGACTCATGGATGACATTGTATCCCACAAGTTTGAGCAAAAGAGAGGACATGTTGCCTCGGCTGTGGAATGTTACATGAAACAATACGGTGCGACAGAAGAAGAAACCATAATTGAATTTCGTAAACAAGTGAGTGATGCATGGAAGGACATAAATGAAGAGTGCCTCCACCCTACACCTCTTGACATGTCCCTCTTAATGCGAGTTCTGAATCTCACACGCGTGATAGATGTAGTATACAAGTCTGAAGATGGCTACACTCATGCTGGAACCATTCTCAAAGATTTTGTAGCTTCTCTACTTATCGAACCTGTGCCTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005797 GO:0006464 GO:0006486 GO:0006487 GO:0006605 GO:0006612 GO:0006620 GO:0006807 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016740 GO:0016757 GO:0016763 GO:0019538 GO:0031090 GO:0031204 GO:0031984 GO:0031985 GO:0033036 GO:0033365 GO:0034613 GO:0034645 GO:0035252 GO:0036211 GO:0042285 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046907 GO:0050513 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070085 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0098588 GO:0098791 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00513 ko01100 map00513 map01100

Pfam Domains

Protein Families

DUF563

Protein Analysis

557

Amino Acids

64.43

Weight (kDa)

5.26

Isoelectric Point (pI)

52.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	34 - 203	2.5e-52	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	261 - 500	2.5e-107	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	301 - 500	2.6e-64	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0005493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55500
fragaria_vesca	FvH4_3g23790
malus_domestica	MD03G1190200.v1.1 MD11G1206700.v1.1
prunus_persica	Prupe.4G229800_v2.0.a1 Prupe.4G229800_v2.0.a1
pyrus_communis	pycom03g14300 pycom11g17980
rosa_chinensis	RchiOBHm_Chr5g0041921 RchiOBHm_Chr5g0041971 RchiOBHm_Chr5g0080011
rosa_laevigata	RLG00000034106 RLG00000036844
rosa_multiflora	Rmu_sc0009443.1_g000005
rosa_roxburghii	Rroxscaffold_1G00038610
rosa_rugosa	Rorug05G0197400 Rorug05G0467700
rosa_samantha	Rh5AG282500 Rh5BG287400 Rh5BG287900 Rh5BG543400 Rh5CG319100 Rh5CG319700 Rh5CG566700 Rh5DG296200 Rh5DG296800 Rh5DG553300
rosa_wichuraiana	Rw0G001370 Rw5G048370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	920
Acc36I	ACCTGC	1 cut(s)	738
AccB7I	CCANNNNNTGG	1 cut(s)	102
AccI	GTMKAC	3 cut(s)	73, 858, 1587
AccII	CGCG	1 cut(s)	1572
AccIII	TCCGGA	1 cut(s)	621
AciI	CCGC	1 cut(s)	209
AclWI	GGATC	2 cut(s)	691, 1313
AcsI	RAATTY	4 cut(s)	85, 312, 696, 1466
AcuI	CTGAAG	6 cut(s)	197, 1182, 1215, 1294, 1320, 1617
AcyI	GRCGYC	1 cut(s)	917
AfaI	GTAC	1 cut(s)	495
AfeI	AGCGCT	1 cut(s)	558
AfiI	CCNNNNNNNGG	2 cut(s)	102, 1302
AflIII	ACRYGT	5 cut(s)	163, 657, 1399, 1536, 1570
AgsI	TTSAA	8 cut(s)	218, 257, 284, 418, 610, 727, 959, 1466
AjnI	CCWGG	2 cut(s)	669, 884
AleI	CACNNNNGTG	2 cut(s)	357, 1571
AluBI	AGCT	7 cut(s)	26, 221, 468, 718, 805, 1084, 1643
AluI	AGCT	7 cut(s)	26, 221, 468, 718, 805, 1084, 1643
Alw21I	GWGCWC	1 cut(s)	364
Alw26I	GTCTC	5 cut(s)	9, 102, 666, 813, 1132
AlwI	GGATC	2 cut(s)	691, 1313
AlwNI	CAGNNNCTG	1 cut(s)	118
Aor13HI	TCCGGA	1 cut(s)	621
Aor51HI	AGCGCT	1 cut(s)	558
ApeKI	GCWGC	2 cut(s)	307, 385
ApoI	RAATTY	4 cut(s)	85, 312, 696, 1466
AspLEI	GCGC	1 cut(s)	559
AsuHPI	GGTGA	3 cut(s)	167, 356, 523
AsuII	TTCGAA	1 cut(s)	587
AsuNHI	GCTAGC	3 cut(s)	559, 797, 1246
Bbv12I	GWGCWC	1 cut(s)	364
BbvI	GCAGC	2 cut(s)	319, 397
BccI	CCATC	3 cut(s)	99, 335, 1595
BciT130I	CCWGG	2 cut(s)	671, 886
BciVI	GTATCC	1 cut(s)	1381
BcoDI	GTCTC	5 cut(s)	9, 102, 666, 813, 1132
BfaI	CTAG	7 cut(s)	512, 560, 641, 798, 965, 978, 1247
BfoI	RGCGCY	1 cut(s)	560
BfuAI	ACCTGC	1 cut(s)	738
BfuI	GTATCC	1 cut(s)	1381
BisI	GCNGC	2 cut(s)	308, 386
BlsI	GCNGC	2 cut(s)	309, 387
Bme1390I	CCNGG	2 cut(s)	671, 886
BmiI	GGNNCC	2 cut(s)	207, 1621
BmrFI	CCNGG	2 cut(s)	671, 886
BmrI	ACTGGG	1 cut(s)	90
BmsI	GCATC	3 cut(s)	52, 754, 1477
BmtI	GCTAGC	3 cut(s)	563, 801, 1250
BmuI	ACTGGG	1 cut(s)	90
BpmI	CTGGAG	2 cut(s)	257, 566
Bpu14I	TTCGAA	1 cut(s)	587
BpuEI	CTTGAG	1 cut(s)	15
Bsa29I	ATCGAT	1 cut(s)	927
BsaAI	YACGTR	1 cut(s)	689
BsaBI	GATNNNNATC	1 cut(s)	345
BsaHI	GRCGYC	1 cut(s)	917
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	3 cut(s)	635, 1008, 1407
BsaWI	WCCGGW	2 cut(s)	621, 1021
BsaXI	ACNNNNNCTCC	2 cut(s)	1266, 1296
Bsc4I	CCNNNNNNNGG	2 cut(s)	102, 1302
Bse1I	ACTGG	4 cut(s)	96, 112, 212, 240
Bse8I	GATNNNNATC	1 cut(s)	345
BseAI	TCCGGA	1 cut(s)	621
BseBI	CCWGG	2 cut(s)	671, 886
BseCI	ATCGAT	1 cut(s)	927
BseDI	CCNNGG	3 cut(s)	635, 1008, 1407
BseGI	GGATG	5 cut(s)	91, 1018, 1207, 1256, 1366
BseJI	GATNNNNATC	1 cut(s)	345
BseLI	CCNNNNNNNGG	2 cut(s)	102, 1302
BseMII	CTCAG	3 cut(s)	695, 861, 1017
BseNI	ACTGG	4 cut(s)	96, 112, 212, 240
BseRI	GAGGAG	1 cut(s)	513
BseXI	GCAGC	2 cut(s)	319, 397
BsgI	GTGCAG	1 cut(s)	335
Bsh1236I	CGCG	1 cut(s)	1572
BshVI	ATCGAT	1 cut(s)	927
BsiHKAI	GWGCWC	1 cut(s)	364
BsiSI	CCGG	2 cut(s)	622, 1022
BslFI	GGGAC	3 cut(s)	1010, 1110, 1525
BslI	CCNNNNNNNGG	2 cut(s)	102, 1302
BsmAI	GTCTC	5 cut(s)	9, 102, 666, 813, 1132
BsmFI	GGGAC	3 cut(s)	1010, 1110, 1525
BsmI	GAATGC	1 cut(s)	55
Bso31I	GGTCTC	1 cut(s)	102
Bsp119I	TTCGAA	1 cut(s)	587
Bsp1286I	GDGCHC	1 cut(s)	364
Bsp13I	TCCGGA	1 cut(s)	621
Bsp143I	GATC	3 cut(s)	346, 683, 1305
Bsp19I	CCATGG	1 cut(s)	1008
BspACI	CCGC	1 cut(s)	209
BspCNI	CTCAG	3 cut(s)	696, 862, 1016
BspDI	ATCGAT	1 cut(s)	927
BspEI	TCCGGA	1 cut(s)	621
BspFNI	CGCG	1 cut(s)	1572
BspLI	GGNNCC	2 cut(s)	207, 1621
BspMI	ACCTGC	1 cut(s)	738
BspOI	GCTAGC	3 cut(s)	563, 801, 1250
BspPI	GGATC	2 cut(s)	691, 1313
BspQI	GCTCTTC	1 cut(s)	369
BspT104I	TTCGAA	1 cut(s)	587
BspTNI	GGTCTC	1 cut(s)	102
BsrI	ACTGG	4 cut(s)	96, 112, 212, 240
BssECI	CCNNGG	3 cut(s)	635, 1008, 1407
BssMI	GATC	3 cut(s)	346, 683, 1305
BssNAI	GTATAC	1 cut(s)	1588
BssNI	GRCGYC	1 cut(s)	917
BssT1I	CCWWGG	1 cut(s)	1008
Bst1107I	GTATAC	1 cut(s)	1588
Bst2UI	CCWGG	2 cut(s)	671, 886
Bst4CI	ACNGT	4 cut(s)	338, 569, 1053, 1439
Bst6I	CTCTTC	4 cut(s)	185, 369, 1130, 1503
BstACI	GRCGYC	1 cut(s)	917
BstAPI	GCANNNNNTGC	1 cut(s)	1157
BstBAI	YACGTR	1 cut(s)	689
BstBI	TTCGAA	1 cut(s)	587
BstC8I	GCNNGC	9 cut(s)	555, 561, 603, 799, 803, 953, 1086, 1090, 1248
BstDEI	CTNAG	6 cut(s)	488, 704, 758, 870, 1003, 1320
BstDSI	CCRYGG	1 cut(s)	1008
BstF5I	GGATG	5 cut(s)	91, 1018, 1207, 1256, 1366
BstFNI	CGCG	1 cut(s)	1572
BstH2I	RGCGCY	1 cut(s)	560
BstHHI	GCGC	1 cut(s)	559
BstKTI	GATC	3 cut(s)	349, 686, 1308
BstMAI	GTCTC	5 cut(s)	9, 102, 666, 813, 1132
BstMBI	GATC	3 cut(s)	346, 683, 1305
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 1127, 1157
BstNI	CCWGG	2 cut(s)	671, 886
BstNSI	RCATGY	5 cut(s)	167, 605, 661, 1403, 1540
BstSCI	CCNGG	2 cut(s)	669, 884
BstUI	CGCG	1 cut(s)	1572
BstV1I	GCAGC	2 cut(s)	319, 397
BstX2I	RGATCY	1 cut(s)	1305
BstXI	CCANNNNNNTGG	1 cut(s)	544
BstYI	RGATCY	1 cut(s)	1305
BstZ17I	GTATAC	1 cut(s)	1588
Bsu15I	ATCGAT	1 cut(s)	927
BsuI	GTATCC	1 cut(s)	1381
BsuTUI	ATCGAT	1 cut(s)	927
BtgI	CCRYGG	1 cut(s)	1008
BtgZI	GCGATG	2 cut(s)	420, 1145
BtsCI	GGATG	5 cut(s)	91, 1018, 1207, 1256, 1366
BtsIMutI	CAGTG	4 cut(s)	44, 521, 1049, 1318
BveI	ACCTGC	1 cut(s)	738
Cac8I	GCNNGC	9 cut(s)	555, 561, 603, 799, 803, 953, 1086, 1090, 1248
CaiI	CAGNNNCTG	1 cut(s)	118
CfoI	GCGC	1 cut(s)	559
ClaI	ATCGAT	1 cut(s)	927
Csp6I	GTAC	1 cut(s)	494
CspCI	CAANNNNNGTGG	2 cut(s)	1243, 1278
CviQI	GTAC	1 cut(s)	494
DdeI	CTNAG	6 cut(s)	488, 704, 758, 870, 1003, 1320
DpnI	GATC	3 cut(s)	348, 685, 1307
DpnII	GATC	3 cut(s)	346, 683, 1305
Eam1104I	CTCTTC	4 cut(s)	185, 369, 1130, 1503
EarI	CTCTTC	4 cut(s)	185, 369, 1130, 1503
EciI	GGCGGA	1 cut(s)	198
Eco130I	CCWWGG	1 cut(s)	1008
Eco31I	GGTCTC	1 cut(s)	102
Eco32I	GATATC	1 cut(s)	1279
Eco47III	AGCGCT	1 cut(s)	558
Eco57I	CTGAAG	6 cut(s)	197, 1182, 1215, 1294, 1320, 1617
EcoRII	CCWGG	2 cut(s)	669, 884
EcoRV	GATATC	1 cut(s)	1279
EcoT14I	CCWWGG	1 cut(s)	1008
EcoT22I	ATGCAT	1 cut(s)	1492
ErhI	CCWWGG	1 cut(s)	1008
FalI	AAGNNNNNCTT	2 cut(s)	1206, 1238
FaqI	GGGAC	3 cut(s)	1010, 1110, 1525
FblI	GTMKAC	3 cut(s)	73, 858, 1587
Fnu4HI	GCNGC	2 cut(s)	308, 386
FokI	GGATG	5 cut(s)	78, 1025, 1214, 1243, 1373
Fsp4HI	GCNGC	2 cut(s)	308, 386
FspBI	CTAG	7 cut(s)	512, 560, 641, 798, 965, 978, 1247
GlaI	GCGC	1 cut(s)	558
GluI	GCNGC	2 cut(s)	308, 386
GsuI	CTGGAG	2 cut(s)	257, 566
HaeII	RGCGCY	1 cut(s)	560
HapII	CCGG	2 cut(s)	622, 1022
HhaI	GCGC	1 cut(s)	559
Hin1I	GRCGYC	1 cut(s)	917
Hin6I	GCGC	1 cut(s)	557
HinP1I	GCGC	1 cut(s)	557
HincII	GTYRAC	1 cut(s)	74
HindII	GTYRAC	1 cut(s)	74
HindIII	AAGCTT	2 cut(s)	219, 466
HinfI	GANTC	6 cut(s)	548, 610, 855, 1292, 1353, 1561
HpaII	CCGG	2 cut(s)	622, 1022
HphI	GGTGA	3 cut(s)	167, 356, 523
Hpy166II	GTNNAC	4 cut(s)	74, 859, 1475, 1588
Hpy188I	TCNGA	3 cut(s)	750, 1560, 1597
Hpy188III	TCNNGA	7 cut(s)	317, 443, 512, 545, 622, 844, 1532
Hpy8I	GTNNAC	4 cut(s)	74, 859, 1475, 1588
Hpy99I	CGWCG	1 cut(s)	78
HpyAV	CCTTC	5 cut(s)	172, 538, 619, 775, 1489
HpyCH4III	ACNGT	4 cut(s)	338, 569, 1053, 1439
HpyCH4IV	ACGT	3 cut(s)	76, 688, 917
HpyCH4V	TGCA	9 cut(s)	307, 352, 713, 745, 770, 815, 1088, 1350, 1490
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 1127, 1157
HpyF3I	CTNAG	6 cut(s)	488, 704, 758, 870, 1003, 1320
HpySE526I	ACGT	3 cut(s)	76, 688, 917
Hsp92I	GRCGYC	1 cut(s)	917
HspAI	GCGC	1 cut(s)	557
Kpn2I	TCCGGA	1 cut(s)	621
Kzo9I	GATC	3 cut(s)	346, 683, 1305
LguI	GCTCTTC	1 cut(s)	369
LmnI	GCTCC	2 cut(s)	211, 738
Lsp1109I	GCAGC	2 cut(s)	319, 397
LweI	GCATC	3 cut(s)	52, 754, 1477
MaeI	CTAG	7 cut(s)	512, 560, 641, 798, 965, 978, 1247
MaeII	ACGT	3 cut(s)	76, 688, 917
MaeIII	GTNAC	9 cut(s)	125, 332, 392, 689, 1040, 1225, 1282, 1313, 1421
MalI	GATC	3 cut(s)	348, 685, 1307
MboI	GATC	3 cut(s)	346, 683, 1305
MfeI	CAATTG	1 cut(s)	984
MflI	RGATCY	1 cut(s)	1305
MhlI	GDGCHC	1 cut(s)	364
MluCI	AATT	9 cut(s)	85, 312, 322, 696, 984, 1100, 1114, 1461, 1466
MluI	ACGCGT	1 cut(s)	1570
MlyI	GAGTC	4 cut(s)	557, 864, 1286, 1347
MmeI	TCCRAC	5 cut(s)	65, 193, 760, 768, 1246
Mph1103I	ATGCAT	1 cut(s)	1492
MroI	TCCGGA	1 cut(s)	621
MseI	TTAA	3 cut(s)	327, 572, 1547
MslI	CAYNNNNRTG	3 cut(s)	357, 447, 1571
MspI	CCGG	2 cut(s)	622, 1022
MspR9I	CCNGG	2 cut(s)	671, 886
MunI	CAATTG	1 cut(s)	984
Mva1269I	GAATGC	1 cut(s)	55
MvaI	CCWGG	2 cut(s)	671, 886
MvnI	CGCG	1 cut(s)	1572
MwoI	GCNNNNNNNGC	3 cut(s)	32, 1127, 1157
NcoI	CCATGG	1 cut(s)	1008
NdeII	GATC	3 cut(s)	346, 683, 1305
NheI	GCTAGC	3 cut(s)	559, 797, 1246
NlaIV	GGNNCC	2 cut(s)	207, 1621
NmeAIII	GCCGAG	1 cut(s)	1388
NmuCI	GTSAC	2 cut(s)	1225, 1313
NsiI	ATGCAT	1 cut(s)	1492
NspI	RCATGY	5 cut(s)	167, 605, 661, 1403, 1540
NspV	TTCGAA	1 cut(s)	587
OliI	CACNNNNGTG	2 cut(s)	357, 1571
PaeI	GCATGC	1 cut(s)	605
PciI	ACATGT	4 cut(s)	163, 657, 1399, 1536
PciSI	GCTCTTC	1 cut(s)	369
PctI	GAATGC	1 cut(s)	55
PfeI	GAWTC	2 cut(s)	610, 1561
PflMI	CCANNNNNTGG	1 cut(s)	102
PkrI	GCNGC	2 cut(s)	309, 387
PleI	GAGTC	4 cut(s)	556, 863, 1286, 1347
PpsI	GAGTC	4 cut(s)	556, 863, 1286, 1347
Ppu21I	YACGTR	1 cut(s)	689
PscI	ACATGT	4 cut(s)	163, 657, 1399, 1536
Psp6I	CCWGG	2 cut(s)	669, 884
PspGI	CCWGG	2 cut(s)	669, 884
PspN4I	GGNNCC	2 cut(s)	207, 1621
PstNI	CAGNNNCTG	1 cut(s)	118
PsuI	RGATCY	1 cut(s)	1305
RsaI	GTAC	1 cut(s)	495
RsaNI	GTAC	1 cut(s)	494
RseI	CAYNNNNRTG	3 cut(s)	357, 447, 1571
SalI	GTCGAC	1 cut(s)	72
SapI	GCTCTTC	1 cut(s)	369
SaqAI	TTAA	3 cut(s)	327, 572, 1547
SatI	GCNGC	2 cut(s)	308, 386
Sau3AI	GATC	3 cut(s)	346, 683, 1305
SchI	GAGTC	4 cut(s)	557, 864, 1286, 1347
ScrFI	CCNGG	2 cut(s)	671, 886
SduI	GDGCHC	1 cut(s)	364
SfaNI	GCATC	3 cut(s)	52, 754, 1477
SfuI	TTCGAA	1 cut(s)	587
SmiMI	CAYNNNNRTG	3 cut(s)	357, 447, 1571
SmlI	CTYRAG	1 cut(s)	30
SmoI	CTYRAG	1 cut(s)	30
SphI	GCATGC	1 cut(s)	605
Sse9I	AATT	9 cut(s)	85, 312, 322, 696, 984, 1100, 1114, 1461, 1466
SsiI	CCGC	1 cut(s)	209
SspMI	CTAG	7 cut(s)	512, 560, 641, 798, 965, 978, 1247
StyD4I	CCNGG	2 cut(s)	669, 884
StyI	CCWWGG	1 cut(s)	1008
TaaI	ACNGT	4 cut(s)	338, 569, 1053, 1439
TaiI	ACGT	3 cut(s)	79, 691, 920
TaqI	TCGA	6 cut(s)	73, 426, 587, 831, 927, 1656
TasI	AATT	9 cut(s)	85, 312, 322, 696, 984, 1100, 1114, 1461, 1466
TfiI	GAWTC	2 cut(s)	610, 1561
Tru1I	TTAA	3 cut(s)	327, 572, 1547
Tru9I	TTAA	3 cut(s)	327, 572, 1547
TscAI	CASTG	4 cut(s)	51, 528, 1056, 1318
TseFI	GTSAC	2 cut(s)	1225, 1313
TseI	GCWGC	2 cut(s)	307, 385
Tsp45I	GTSAC	2 cut(s)	1225, 1313
TspDTI	ATGAA	8 cut(s)	393, 489, 1029, 1046, 1148, 1218, 1442, 1521
TspGWI	ACGGA	1 cut(s)	696
TspRI	CASTG	4 cut(s)	51, 528, 1056, 1318
Van91I	CCANNNNNTGG	1 cut(s)	102
XapI	RAATTY	4 cut(s)	85, 312, 696, 1466
XbaI	TCTAGA	1 cut(s)	511
XceI	RCATGY	5 cut(s)	167, 605, 661, 1403, 1540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	541
XmiI	GTMKAC	3 cut(s)	73, 858, 1587
XspI	CTAG	7 cut(s)	512, 560, 641, 798, 965, 978, 1247
ZraI	GACGTC	1 cut(s)	918
Zsp2I	ATGCAT	1 cut(s)	1492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.