Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002323

Physical Location & Seq

Genomic Coordinates Forward (+)

1735387 .. 1742333

Gene Structure 6947 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G016000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGCTAAGGGCTTTTCCTGTGGTTTCCCGCCTACCCATTCCCTCTCCCACAAGTACTCAGACTACGAGTGTTTTGAGCAGAATGAGCTCAACAGCCCCATCACCAAAATTCCCAAAATTTGTTCCTGTGGAAGAGAGTACCATCCATTCGATAAGTAAACCTGATGGTATCAGGTTTAGTCTTGTGTCGTATAACATTTTGGCTCAGGTATATGTAAAGAGTTCCTTGTTTCCACACTCTCCATCCCCTTGTCTGAGGTGGAAAGCTCGCTCACAGGCAATTTTGAGTGTTCTCAAGAACCTTGGAGCTGACTTTCTCTGCCTGCAGGAAGTTGATGAGTACAACAGCTTTTACAAAGGAAACATGGAGAGCAATGGCTATTATAGTTCTTATATTCAGAGAAGTGGGCAAAAGCGTGATGGATGTGGAATTTTTTATAAGCACGACATGGCAGAGTTGCTGTTAGAGGAGAAAATAGAATACAACGATCTTGTAGACTCAATTCTAGATGGAAATGGGCATGGTGATGATAAACCAAATAACAAAGAAGCTGTTGAAAACAAAGACGATGGACCCAAAATTGGTTCAACATTACAAAGCGCCCTGGATCAGGGAGATCCTGATGATCCTCGTGTCAGACTGAAGCGTGATTGTGTTGGAATTATGGCAGTGTTCAAGCTTAAAAATCCTTCTAATCATGTTGTTATTGTGGCAAACACACACCTTTACTGGGATCCAGACTGGGCTGACGTTAAGCTTGCACAAGCTAAATATCTTCTATCACGCTTAGCTCAATTTAAAACATTGGTATCCCAGAGATTTGACTGCAGTCCTTCATTAATTTTATCTGGTGACTTCAATTCAACTCCAGGGGATAAGGTTTACCAGTACCTTATTTCTGGCAACTCTTCATCTGCACCCTCGATAGATTCTGTAGATCTACCTATTCCCTTGTGCAGCGCATATGCTACTACACGTGGTGAACCACCATTTACAAATTACACTCCTGGTTTCACTGGTACACTTGATTATATATTCTTTTCCCCTTCTGACTGCATAAGACCAGTCAGTTTTCTTGAGCTTCCGGAACCAGGCTCGTCTGATCTTGATGGTGGATTACCAAACTTCAGTCACCCAAGCGATCACTTACCAATTGGTGTTGAATTTGAGATCTCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005488 GO:0005515 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019222 GO:0019439 GO:0034641 GO:0034655 GO:0042752 GO:0043170 GO:0043621 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

394

Amino Acids

43.44

Weight (kDa)

5.42

Isoelectric Point (pI)

47.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31500 AT1G31500 AT1G31500 AT1G31500 AT1G31500 AT1G31500 AT1G31500 AT1G31500
fragaria_vesca	FvH4_5g24460 FvH4_5g24460 FvH4_5g24460 FvH4_5g24460 FvH4_5g24460 FvH4_5g24460 FvH4_5g24460
malus_domestica	MD16G1287100.v1.1 MD16G1287200.v1.1
prunus_persica	Prupe.5G016000_v2.0.a1 Prupe.5G016000_v2.0.a1 Prupe.5G016000_v2.0.a1 Prupe.5G016000_v2.0.a1 Prupe.5G016000_v2.0.a1 Prupe.5G016000_v2.0.a1 Prupe.5G016000_v2.0.a1
pyrus_communis	pycom16g25670
rosa_chinensis	RchiOBHm_Chr7g0214871
rosa_laevigata	RLG00000002713
rosa_multiflora	Rmu_sc0002308.1_g000016 Rmu_ssc0000134.1_g000002
rosa_roxburghii	Rroxscaffold_3G00244950
rosa_rugosa	Rorug07G0147900
rosa_samantha	Rh1CG151100 Rh3AG125900 Rh4AG091900 Rh5CG394900 Rh7AG284800 Rh7BG275700 Rh7BG276300 Rh7BG276700 Rh7CG304000 Rh7DG288300
rosa_wichuraiana	Rw7G024290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	438
AccI	GTMKAC	1 cut(s)	495
AccIII	TCCGGA	1 cut(s)	1084
AciI	CCGC	1 cut(s)	28
AclWI	GGATC	5 cut(s)	611, 615, 620, 728, 741
AcsI	RAATTY	4 cut(s)	107, 116, 429, 1163
AcuI	CTGAAG	2 cut(s)	662, 1111
AcvI	CACGTG	1 cut(s)	977
AdeI	CACNNNGTG	1 cut(s)	980
AfaI	GTAC	5 cut(s)	55, 139, 341, 890, 1021
AfiI	CCNNNNNNNGG	4 cut(s)	581, 610, 730, 1091
AflIII	ACRYGT	1 cut(s)	974
AgsI	TTSAA	6 cut(s)	557, 588, 676, 859, 864, 1163
AjnI	CCWGG	4 cut(s)	603, 868, 1006, 1090
Alw21I	GWGCWC	1 cut(s)	89
AlwI	GGATC	5 cut(s)	611, 615, 620, 728, 741
Aor13HI	TCCGGA	1 cut(s)	1084
ApeKI	GCWGC	1 cut(s)	957
ApoI	RAATTY	4 cut(s)	107, 116, 429, 1163
AseI	ATTAAT	1 cut(s)	839
AspLEI	GCGC	2 cut(s)	602, 962
AspS9I	GGNCC	1 cut(s)	572
AsuHPI	GGTGA	5 cut(s)	93, 536, 863, 992, 1124
AvaII	GGWCC	1 cut(s)	572
BaeI	ACNNNNGTAYC	2 cut(s)	792, 825
BamHI	GGATCC	1 cut(s)	733
BanII	GRGCYC	1 cut(s)	89
BauI	CACGAG	1 cut(s)	630
BbrPI	CACGTG	1 cut(s)	977
Bbv12I	GWGCWC	1 cut(s)	89
BbvI	GCAGC	1 cut(s)	969
BccI	CCATC	8 cut(s)	106, 149, 158, 250, 413, 503, 563, 1103
BciT130I	CCWGG	4 cut(s)	605, 870, 1008, 1092
BciVI	GTATCC	1 cut(s)	820
BfaI	CTAG	1 cut(s)	506
BfmI	CTRYAG	3 cut(s)	323, 826, 933
BfoI	RGCGCY	1 cut(s)	603
BfuI	GTATCC	1 cut(s)	820
BglII	AGATCT	2 cut(s)	937, 1170
BisI	GCNGC	1 cut(s)	958
BlpI	GCTNAGC	1 cut(s)	787
BlsI	GCNGC	1 cut(s)	959
BmcAI	AGTACT	1 cut(s)	55
Bme1390I	CCNGG	4 cut(s)	605, 870, 1008, 1092
Bme18I	GGWCC	1 cut(s)	572
BmgT120I	GGNCC	1 cut(s)	572
BmiI	GGNNCC	3 cut(s)	574, 735, 1089
BmrFI	CCNGG	4 cut(s)	605, 870, 1008, 1092
BmrI	ACTGGG	2 cut(s)	739, 751
BmuI	ACTGGG	2 cut(s)	739, 751
BoxI	GACNNNNGTC	1 cut(s)	828
BpmI	CTGGAG	2 cut(s)	852, 1159
Bpu10I	CCTNAGC	2 cut(s)	5, 204
Bpu1102I	GCTNAGC	1 cut(s)	787
BpuEI	CTTGAG	2 cut(s)	278, 1097
BsaAI	YACGTR	1 cut(s)	977
BsaJI	CCNNGG	3 cut(s)	301, 603, 869
BsaWI	WCCGGW	1 cut(s)	1084
Bsc4I	CCNNNNNNNGG	4 cut(s)	581, 610, 730, 1091
Bse1I	ACTGG	5 cut(s)	734, 746, 886, 1021, 1064
Bse3DI	GCAATG	1 cut(s)	379
BseAI	TCCGGA	1 cut(s)	1084
BseBI	CCWGG	4 cut(s)	605, 870, 1008, 1092
BseDI	CCNNGG	3 cut(s)	301, 603, 869
BseGI	GGATG	3 cut(s)	141, 242, 428
BseLI	CCNNNNNNNGG	4 cut(s)	581, 610, 730, 1091
BseMI	GCAATG	1 cut(s)	379
BseMII	CTCAG	3 cut(s)	71, 218, 245
BseNI	ACTGG	5 cut(s)	734, 746, 886, 1021, 1064
BseRI	GAGGAG	1 cut(s)	482
BseXI	GCAGC	1 cut(s)	969
BsgI	GTGCAG	2 cut(s)	900, 976
BsiHKAI	GWGCWC	1 cut(s)	89
BsiSI	CCGG	1 cut(s)	1085
BslI	CCNNNNNNNGG	4 cut(s)	581, 610, 730, 1091
Bsp1286I	GDGCHC	1 cut(s)	89
Bsp13I	TCCGGA	1 cut(s)	1084
Bsp143I	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
Bsp1720I	GCTNAGC	1 cut(s)	787
BspACI	CCGC	1 cut(s)	28
BspCNI	CTCAG	3 cut(s)	70, 217, 246
BspEI	TCCGGA	1 cut(s)	1084
BspLI	GGNNCC	3 cut(s)	574, 735, 1089
BspMAI	CTGCAG	2 cut(s)	327, 830
BspPI	GGATC	5 cut(s)	611, 615, 620, 728, 741
BsrDI	GCAATG	1 cut(s)	379
BsrI	ACTGG	5 cut(s)	734, 746, 886, 1021, 1064
BssECI	CCNNGG	3 cut(s)	301, 603, 869
BssMI	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
BssSI	CACGAG	1 cut(s)	630
BssT1I	CCWWGG	1 cut(s)	301
Bst2BI	CACGAG	1 cut(s)	630
Bst2UI	CCWGG	4 cut(s)	605, 870, 1008, 1092
Bst6I	CTCTTC	2 cut(s)	126, 913
BstBAI	YACGTR	1 cut(s)	977
BstC8I	GCNNGC	3 cut(s)	268, 323, 759
BstDEI	CTNAG	5 cut(s)	5, 57, 204, 254, 787
BstENI	CCTNNNNNAGG	1 cut(s)	608
BstF5I	GGATG	3 cut(s)	141, 242, 428
BstH2I	RGCGCY	1 cut(s)	603
BstHHI	GCGC	2 cut(s)	602, 962
BstKTI	GATC	9 cut(s)	490, 610, 619, 628, 736, 940, 1105, 1144, 1173
BstMBI	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
BstMWI	GCNNNNNNNGC	1 cut(s)	84
BstNI	CCWGG	4 cut(s)	605, 870, 1008, 1092
BstPAI	GACNNNNGTC	1 cut(s)	828
BstSCI	CCNGG	4 cut(s)	603, 868, 1006, 1090
BstSFI	CTRYAG	3 cut(s)	323, 826, 933
BstV1I	GCAGC	1 cut(s)	969
BstX2I	RGATCY	4 cut(s)	616, 733, 937, 1170
BstYI	RGATCY	4 cut(s)	616, 733, 937, 1170
BsuI	GTATCC	1 cut(s)	820
BtsCI	GGATG	3 cut(s)	141, 242, 428
BtsI	GCAGTG	1 cut(s)	675
BtsIMutI	CAGTG	2 cut(s)	675, 1014
Cac8I	GCNNGC	3 cut(s)	268, 323, 759
CfoI	GCGC	2 cut(s)	602, 962
Cfr13I	GGNCC	1 cut(s)	572
Csp6I	GTAC	5 cut(s)	54, 138, 340, 889, 1020
CviAII	CATG	4 cut(s)	364, 448, 521, 698
CviQI	GTAC	5 cut(s)	54, 138, 340, 889, 1020
DdeI	CTNAG	5 cut(s)	5, 57, 204, 254, 787
DpnI	GATC	9 cut(s)	489, 609, 618, 627, 735, 939, 1104, 1143, 1172
DpnII	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
DraI	TTTAAA	1 cut(s)	799
DraIII	CACNNNGTG	1 cut(s)	980
Eam1104I	CTCTTC	2 cut(s)	126, 913
EarI	CTCTTC	2 cut(s)	126, 913
Ecl136II	GAGCTC	1 cut(s)	87
Eco130I	CCWWGG	1 cut(s)	301
Eco24I	GRGCYC	1 cut(s)	89
Eco47I	GGWCC	1 cut(s)	572
Eco53kI	GAGCTC	1 cut(s)	87
Eco57I	CTGAAG	2 cut(s)	662, 1111
Eco72I	CACGTG	1 cut(s)	977
EcoICRI	GAGCTC	1 cut(s)	87
EcoNI	CCTNNNNNAGG	1 cut(s)	608
EcoRII	CCWGG	4 cut(s)	603, 868, 1006, 1090
EcoT14I	CCWWGG	1 cut(s)	301
EcoT38I	GRGCYC	1 cut(s)	89
ErhI	CCWWGG	1 cut(s)	301
FaeI	CATG	4 cut(s)	367, 451, 524, 701
FalI	AAGNNNNNCTT	2 cut(s)	209, 241
FatI	CATG	4 cut(s)	363, 447, 520, 697
FauI	CCCGC	1 cut(s)	35
FauNDI	CATATG	1 cut(s)	964
FblI	GTMKAC	1 cut(s)	495
Fnu4HI	GCNGC	1 cut(s)	958
FokI	GGATG	3 cut(s)	128, 229, 435
FriOI	GRGCYC	1 cut(s)	89
Fsp4HI	GCNGC	1 cut(s)	958
FspBI	CTAG	1 cut(s)	506
GlaI	GCGC	2 cut(s)	601, 961
GluI	GCNGC	1 cut(s)	958
GsuI	CTGGAG	2 cut(s)	852, 1159
HaeII	RGCGCY	1 cut(s)	603
HapII	CCGG	1 cut(s)	1085
HhaI	GCGC	2 cut(s)	602, 962
Hin1II	CATG	4 cut(s)	367, 451, 524, 701
Hin6I	GCGC	2 cut(s)	600, 960
HinP1I	GCGC	2 cut(s)	600, 960
HindIII	AAGCTT	2 cut(s)	677, 755
HinfI	GANTC	2 cut(s)	497, 929
HpaII	CCGG	1 cut(s)	1085
HphI	GGTGA	5 cut(s)	93, 536, 863, 992, 1124
Hpy166II	GTNNAC	5 cut(s)	158, 496, 883, 983, 1022
Hpy188I	TCNGA	6 cut(s)	60, 255, 399, 638, 1051, 1102
Hpy188III	TCNNGA	8 cut(s)	295, 506, 620, 737, 1076, 1085, 1106, 1176
Hpy8I	GTNNAC	5 cut(s)	158, 496, 883, 983, 1022
HpyAV	CCTTC	3 cut(s)	699, 843, 1056
HpyCH4IV	ACGT	2 cut(s)	750, 976
HpyCH4V	TGCA	6 cut(s)	325, 761, 828, 917, 957, 1056
HpyF10VI	GCNNNNNNNGC	1 cut(s)	84
HpyF3I	CTNAG	5 cut(s)	5, 57, 204, 254, 787
HpySE526I	ACGT	2 cut(s)	750, 976
Hsp92II	CATG	4 cut(s)	367, 451, 524, 701
HspAI	GCGC	2 cut(s)	600, 960
Kpn2I	TCCGGA	1 cut(s)	1084
Kzo9I	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
LmnI	GCTCC	1 cut(s)	305
Lsp1109I	GCAGC	1 cut(s)	969
MaeI	CTAG	1 cut(s)	506
MaeII	ACGT	2 cut(s)	750, 976
MaeIII	GTNAC	2 cut(s)	851, 1130
MalI	GATC	9 cut(s)	489, 609, 618, 627, 735, 939, 1104, 1143, 1172
MboI	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
MboII	GAAGA	3 cut(s)	143, 767, 900
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	4 cut(s)	616, 733, 937, 1170
MhlI	GDGCHC	1 cut(s)	89
MlyI	GAGTC	1 cut(s)	491
MmeI	TCCRAC	1 cut(s)	637
MnlI	CCTC	5 cut(s)	52, 249, 460, 639, 931
MroI	TCCGGA	1 cut(s)	1084
MseI	TTAA	4 cut(s)	681, 753, 798, 839
MslI	CAYNNNNRTG	1 cut(s)	525
MspI	CCGG	1 cut(s)	1085
MspR9I	CCNGG	4 cut(s)	605, 870, 1008, 1092
MunI	CAATTG	1 cut(s)	1152
MvaI	CCWGG	4 cut(s)	605, 870, 1008, 1092
MwoI	GCNNNNNNNGC	1 cut(s)	84
NdeI	CATATG	1 cut(s)	964
NdeII	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
NlaIII	CATG	4 cut(s)	367, 451, 524, 701
NlaIV	GGNNCC	3 cut(s)	574, 735, 1089
NmuCI	GTSAC	2 cut(s)	851, 1130
PfeI	GAWTC	1 cut(s)	929
PkrI	GCNGC	1 cut(s)	959
PleI	GAGTC	1 cut(s)	491
PmaCI	CACGTG	1 cut(s)	977
PmlI	CACGTG	1 cut(s)	977
PpsI	GAGTC	1 cut(s)	491
Ppu21I	YACGTR	1 cut(s)	977
PshAI	GACNNNNGTC	1 cut(s)	828
PshBI	ATTAAT	1 cut(s)	839
PsiI	TTATAA	1 cut(s)	438
Psp124BI	GAGCTC	1 cut(s)	89
Psp6I	CCWGG	4 cut(s)	603, 868, 1006, 1090
PspCI	CACGTG	1 cut(s)	977
PspGI	CCWGG	4 cut(s)	603, 868, 1006, 1090
PspN4I	GGNNCC	3 cut(s)	574, 735, 1089
PspPI	GGNCC	1 cut(s)	572
PstI	CTGCAG	2 cut(s)	327, 830
PsuI	RGATCY	4 cut(s)	616, 733, 937, 1170
RsaI	GTAC	5 cut(s)	55, 139, 341, 890, 1021
RsaNI	GTAC	5 cut(s)	54, 138, 340, 889, 1020
RseI	CAYNNNNRTG	1 cut(s)	525
SacI	GAGCTC	1 cut(s)	89
SaqAI	TTAA	4 cut(s)	681, 753, 798, 839
SatI	GCNGC	1 cut(s)	958
Sau3AI	GATC	9 cut(s)	487, 607, 616, 625, 733, 937, 1102, 1141, 1170
Sau96I	GGNCC	1 cut(s)	572
SbfI	CCTGCAGG	1 cut(s)	327
ScaI	AGTACT	1 cut(s)	55
SchI	GAGTC	1 cut(s)	491
ScrFI	CCNGG	4 cut(s)	605, 870, 1008, 1092
SdaI	CCTGCAGG	1 cut(s)	327
SduI	GDGCHC	1 cut(s)	89
SfcI	CTRYAG	3 cut(s)	323, 826, 933
SinI	GGWCC	1 cut(s)	572
SmiMI	CAYNNNNRTG	1 cut(s)	525
SmlI	CTYRAG	2 cut(s)	293, 1076
SmoI	CTYRAG	2 cut(s)	293, 1076
Sse8387I	CCTGCAGG	1 cut(s)	327
SsiI	CCGC	1 cut(s)	28
SspMI	CTAG	1 cut(s)	506
SstI	GAGCTC	1 cut(s)	89
StyD4I	CCNGG	4 cut(s)	603, 868, 1006, 1090
StyI	CCWWGG	1 cut(s)	301
TaiI	ACGT	2 cut(s)	753, 979
TaqI	TCGA	2 cut(s)	149, 923
TatI	WGTACW	2 cut(s)	53, 339
TfiI	GAWTC	1 cut(s)	929
Tru1I	TTAA	4 cut(s)	681, 753, 798, 839
Tru9I	TTAA	4 cut(s)	681, 753, 798, 839
TscAI	CASTG	2 cut(s)	675, 1021
TseFI	GTSAC	2 cut(s)	851, 1130
TseI	GCWGC	1 cut(s)	957
Tsp45I	GTSAC	2 cut(s)	851, 1130
TspDTI	ATGAA	2 cut(s)	825, 900
TspRI	CASTG	2 cut(s)	675, 1021
VpaK11BI	GGWCC	1 cut(s)	572
VspI	ATTAAT	1 cut(s)	839
XagI	CCTNNNNNAGG	1 cut(s)	608
XapI	RAATTY	4 cut(s)	107, 116, 429, 1163
XbaI	TCTAGA	1 cut(s)	505
XmiI	GTMKAC	1 cut(s)	495
XspI	CTAG	1 cut(s)	506
ZrmI	AGTACT	1 cut(s)	55

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.