Prupe.5G019500_v2.0.a1

acyl-CoA-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
2128545 .. 2130491
1947 bp
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UTR
Exon/CDS
Intron
Prupe.5G019500.1

Sequence Viewer

Length: 273 bp
ATGGGTTTGAAGGAGGAGTTTGATGAGTATGCTGAAAAAGCCAAGACTCTTCCAGAGTCAACAACCAATGAGAACAAGCTCATCCTCTATGGGCTGTACAAGCAAGCCACTGTTGGTGCAGTGAACACCAGCCGCCCGGGAATATTCAATATGAGGGACAGAGCAAAGTGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGAGGAAGCCATGGGAGACTATGTTACAAAGGTGAAGCAGTTGCTGGAAGAGGCTGGAGCTTCTACTTGA

Protein Analysis

91

Amino Acids

10.08

Weight (kDa)

5.51

Isoelectric Point (pI)

31.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 133
AfaI GTAC 1 cut(s) 98
AgsI TTSAA 3 cut(s) 10, 148, 191
AluBI AGCT 2 cut(s) 79, 263
AluI AGCT 2 cut(s) 79, 263
Alw26I GTCTC 1 cut(s) 213
AlwNI CAGNNNCTG 1 cut(s) 247
Ama87I CYCGRG 1 cut(s) 136
AsuC2I CCSGG 2 cut(s) 137, 138
AsuHPI GGTGA 1 cut(s) 247
AvaI CYCGRG 1 cut(s) 136
BcnI CCSGG 2 cut(s) 137, 138
BcoDI GTCTC 1 cut(s) 213
BisI GCNGC 1 cut(s) 133
BlsI GCNGC 1 cut(s) 134
Bme1390I CCNGG 2 cut(s) 137, 138
BmeT110I CYCGRG 1 cut(s) 136
BmrFI CCNGG 2 cut(s) 137, 138
BmsI GCATC 1 cut(s) 163
BpuMI CCSGG 2 cut(s) 137, 138
BsaJI CCNNGG 3 cut(s) 136, 201, 213
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
BseDI CCNNGG 3 cut(s) 136, 201, 213
BseGI GGATG 2 cut(s) 81, 178
BseRI GAGGAG 1 cut(s) 29
BsgI GTGCAG 1 cut(s) 138
BsiHKCI CYCGRG 1 cut(s) 136
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 170
BsmAI GTCTC 1 cut(s) 213
BsmFI GGGAC 1 cut(s) 170
BsoBI CYCGRG 1 cut(s) 136
Bsp1407I TGTACA 1 cut(s) 96
Bsp19I CCATGG 1 cut(s) 213
BspACI CCGC 1 cut(s) 133
BsrGI TGTACA 1 cut(s) 96
BssECI CCNNGG 3 cut(s) 136, 201, 213
BssT1I CCWWGG 2 cut(s) 201, 213
Bst4CI ACNGT 1 cut(s) 112
Bst6I CTCTTC 2 cut(s) 54, 246
BstAUI TGTACA 1 cut(s) 96
BstC8I GCNNGC 1 cut(s) 105
BstDSI CCRYGG 1 cut(s) 213
BstF5I GGATG 2 cut(s) 81, 178
BstMAI GTCTC 1 cut(s) 213
BstMWI GCNNNNNNNGC 3 cut(s) 38, 100, 182
BstSCI CCNGG 2 cut(s) 135, 136
BtgI CCRYGG 1 cut(s) 213
BtsCI GGATG 2 cut(s) 81, 178
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 2 cut(s) 108, 126
Cac8I GCNNGC 1 cut(s) 105
CaiI CAGNNNCTG 1 cut(s) 247
Cfr9I CCCGGG 1 cut(s) 136
Csp6I GTAC 1 cut(s) 97
CviAII CATG 2 cut(s) 177, 214
CviJI RGCY 9 cut(s) 41, 79, 94, 107, 132, 185, 212, 257, 263
CviKI_1 RGCY 9 cut(s) 41, 79, 94, 107, 132, 185, 212, 257, 263
CviQI GTAC 1 cut(s) 97
Eam1104I CTCTTC 2 cut(s) 54, 246
EarI CTCTTC 2 cut(s) 54, 246
Eco130I CCWWGG 2 cut(s) 201, 213
Eco88I CYCGRG 1 cut(s) 136
EcoT14I CCWWGG 2 cut(s) 201, 213
EcoT22I ATGCAT 1 cut(s) 178
ErhI CCWWGG 2 cut(s) 201, 213
FaeI CATG 2 cut(s) 180, 217
FaiI YATR 6 cut(s) 30, 90, 152, 178, 215, 225
FaqI GGGAC 1 cut(s) 170
FatI CATG 2 cut(s) 176, 213
Fnu4HI GCNGC 1 cut(s) 133
FokI GGATG 2 cut(s) 68, 185
Fsp4HI GCNGC 1 cut(s) 133
GluI GCNGC 1 cut(s) 133
HapII CCGG 1 cut(s) 137
Hin1II CATG 2 cut(s) 180, 217
HincII GTYRAC 1 cut(s) 60
HindII GTYRAC 1 cut(s) 60
HinfI GANTC 2 cut(s) 46, 56
HpaII CCGG 1 cut(s) 137
HphI GGTGA 1 cut(s) 247
Hpy166II GTNNAC 2 cut(s) 60, 124
Hpy188III TCNNGA 1 cut(s) 53
Hpy8I GTNNAC 2 cut(s) 60, 124
HpyAV CCTTC 3 cut(s) 4, 175, 185
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4V TGCA 2 cut(s) 119, 176
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 100, 182
Hsp92II CATG 2 cut(s) 180, 217
LmnI GCTCC 1 cut(s) 260
LpnPI CCDG 5 cut(s) 66, 142, 150, 233, 243
LweI GCATC 1 cut(s) 163
MaeIII GTNAC 1 cut(s) 226
MboII GAAGA 2 cut(s) 41, 263
MlyI GAGTC 2 cut(s) 40, 65
MnlI CCTC 5 cut(s) 7, 95, 147, 199, 247
Mph1103I ATGCAT 1 cut(s) 178
MspI CCGG 1 cut(s) 137
MspR9I CCNGG 2 cut(s) 137, 138
MwoI GCNNNNNNNGC 3 cut(s) 38, 100, 182
NciI CCSGG 2 cut(s) 137, 138
NcoI CCATGG 1 cut(s) 213
NlaIII CATG 2 cut(s) 180, 217
NsiI ATGCAT 1 cut(s) 178
PkrI GCNGC 1 cut(s) 134
PleI GAGTC 2 cut(s) 40, 64
PpsI GAGTC 2 cut(s) 40, 64
PstNI CAGNNNCTG 1 cut(s) 247
RsaI GTAC 1 cut(s) 98
RsaNI GTAC 1 cut(s) 97
SatI GCNGC 1 cut(s) 133
SchI GAGTC 2 cut(s) 40, 65
ScrFI CCNGG 2 cut(s) 137, 138
SetI ASST 3 cut(s) 81, 237, 265
SfaNI GCATC 1 cut(s) 163
SmaI CCCGGG 1 cut(s) 138
SsiI CCGC 1 cut(s) 133
SspI AATATT 1 cut(s) 144
StyD4I CCNGG 2 cut(s) 135, 136
StyI CCWWGG 2 cut(s) 201, 213
TaaI ACNGT 1 cut(s) 112
TatI WGTACW 1 cut(s) 96
TauI GCSGC 1 cut(s) 135
TscAI CASTG 2 cut(s) 115, 126
TspMI CCCGGG 1 cut(s) 136
TspRI CASTG 2 cut(s) 115, 126
XmaI CCCGGG 1 cut(s) 136
Zsp2I ATGCAT 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.