Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005057

Physical Location & Seq

Genomic Coordinates Forward (+)

3755392 .. 3765568

Gene Structure 10177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G033200.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGATTCTCTCCCCAACTCCTTCAATCCAAACAAACGTCTCAAAGAAGAGTTTGTGAGCAATTTGACTGGATCGTCGATGATGGAGATTGCCGCGCTTACCACAATAATCCCTATTCTGATTATACTGCGGCACTCAGTTGGCTCCAATCCTGTTGTTGATGTCACATTGAAGAAAAATGATGATGCGGTAGTCGGTTCTAAGGGCAGACCAGCTTACATGTCTACAATGGCTTTCGATTTTCTTCTCATTGTGCTTCCAATCATCTTAGTTTACACTGTTTTAGCAGAGTGGATGTATATCTGGGCAACTTTGTTGACATTGTTACTGCTTATCAGAATTGCAGCCAACAGGTTTGGTTCTTATTCTAATTTGAAGGAAGATCCCTATTCTGTACGAAAAAATATATCGTCTTACAGGGTCGCTACGATGATCATTACATGCTTGTGTATCTTGGCTGTTGACTTCAGAATTTTCCCTAGAAGATATGCCAAGACCGAGACTTATGGTACTGGCTGGATGGATCTTGGGGTTGGCTCATTTGTCGTAGCAAATTCATTAGTTTCACGGCAAGCACGAAATATATCATCCAGGAAATGGAAGACTGCAATTCAATCTTCTAGTCCACTGATCATCCTTGGGTTTGCCCGTCTTCTCTCTACCAGAGGTGTGGACTATCAGGTTCATGTAGCTGAATACGGAGTACACTGGAATTTCTTTTTCACACTTGCTGCAATATCAATTCTTACGTGCATAATTAACGTTCCCGCACAGTATTCTGGCATTCTTGGCTCACTAATTCTAGTAGGTTACCAAGTTTGCTTGACACATGGGTTAAACTTGTATCTGCTTTCTAATGAAAGGGGAACTGATATAATCAGCCAAAACAAGGAGGGTTTTTTTAGCATATTTGGATATTGGGGTTTGTACCTTGTTGGTGTCCAGTTAGGAAACTTTCTTTTCTTCAATAACCATTCCTCTGCAACAATGAGGAGCACTAACTGGGCAAAGATTAGAGTCTGGATGCTTTCACTTCTGTTTTGGTTATTAACTGTGATTATAGACCGCCACGTCGAGAGAGTTTCCCGTAGAACGTGCAACCTGGGCTATGTTACACTGGTATTGGCAGTAAATTTACAGGTGCTGGCAATACTACTGCTCTCCGATTTTCTTCCTGGAAGCAAAACTTCAGTACTGGAAGAAGCATATGACCGCAATTTGCTGGGGACATTTCTTCTGGCAAACTTGCTCACAGGTTTGGTGAACTTGTTTGTGGATACCCTGTTTGCATCATCAGTCAAAGCCCTTTTTATTTTGATTGCCTATGCGTTTTCCCTATCCTTCCTCATTGGATTGCTAGATTTTTGCGGTATCAGACTGAAATTTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

GWT1

Protein Analysis

464

Amino Acids

51.93

Weight (kDa)

9.4

Isoelectric Point (pI)

32.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17910 AT4G17910 AT4G17910 AT4G17910
fragaria_vesca	FvH4_5g22370 FvH4_5g22370 FvH4_5g22370 FvH4_5g22370 FvH4_5g22370
malus_domestica	MD00G1071700.v1.1 MD06G1036000.v1.1 MD06G1036200.v1.1 MD09G1215500.v1.1
prunus_persica	Prupe.5G033200_v2.0.a1 Prupe.5G033200_v2.0.a1 Prupe.5G033200_v2.0.a1 Prupe.5G033200_v2.0.a1 Prupe.5G033200_v2.0.a1 Prupe.5G033200_v2.0.a1
pyrus_communis	pycom06g02980
rosa_chinensis	RchiOBHm_Chr7g0210111
rosa_laevigata	RLG00000003064
rosa_multiflora	Rmu_sc0001656.1_g000006
rosa_roxburghii	Rroxscaffold_3G00248610
rosa_rugosa	Rorug07G0118600
rosa_samantha	Rh7AG252100 Rh7BG246900 Rh7CG269100 Rh7DG259400
rosa_wichuraiana	Rw7G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	73, 1070
AccB7I	CCANNNNNTGG	1 cut(s)	597
AccI	GTMKAC	1 cut(s)	224
AccII	CGCG	1 cut(s)	95
AciI	CCGC	7 cut(s)	93, 130, 188, 768, 1066, 1213, 1368
AclI	AACGTT	1 cut(s)	762
AclWI	GGATC	3 cut(s)	79, 377, 531
AcsI	RAATTY	5 cut(s)	471, 553, 712, 1132, 1382
AcuI	CTGAAG	2 cut(s)	451, 1173
AfaI	GTAC	5 cut(s)	396, 511, 705, 929, 1194
AfiI	CCNNNNNNNGG	2 cut(s)	597, 889
AflIII	ACRYGT	1 cut(s)	219
AgsI	TTSAA	5 cut(s)	25, 172, 376, 614, 967
AjiI	CACGTC	1 cut(s)	1072
AjnI	CCWGG	3 cut(s)	590, 1101, 1174
AluBI	AGCT	2 cut(s)	215, 692
AluI	AGCT	2 cut(s)	215, 692
Alw21I	GWGCWC	1 cut(s)	998
Alw26I	GTCTC	2 cut(s)	44, 494
AlwI	GGATC	3 cut(s)	79, 377, 531
AlwNI	CAGNNNCTG	1 cut(s)	1144
ApeKI	GCWGC	2 cut(s)	344, 731
ApoI	RAATTY	5 cut(s)	471, 553, 712, 1132, 1382
ArsI	GACNNNNNNTTYG	1 cut(s)	1368
AspLEI	GCGC	1 cut(s)	97
AsuHPI	GGTGA	1 cut(s)	1273
BbsI	GAAGAC	2 cut(s)	608, 644
Bbv12I	GWGCWC	1 cut(s)	998
BbvI	GCAGC	2 cut(s)	356, 718
BccI	CCATC	2 cut(s)	76, 514
BceAI	ACGGC	1 cut(s)	584
BciT130I	CCWGG	3 cut(s)	592, 1103, 1176
BciVI	GTATCC	1 cut(s)	1270
BclI	TGATCA	2 cut(s)	432, 630
BcoDI	GTCTC	2 cut(s)	44, 494
BfaI	CTAG	4 cut(s)	480, 621, 803, 1358
BfuI	GTATCC	1 cut(s)	1270
BisI	GCNGC	4 cut(s)	93, 131, 345, 732
BlsI	GCNGC	4 cut(s)	94, 132, 346, 733
BmcAI	AGTACT	1 cut(s)	1194
Bme1390I	CCNGG	3 cut(s)	592, 1103, 1176
BmgBI	CACGTC	1 cut(s)	1072
BmiI	GGNNCC	1 cut(s)	145
BmrFI	CCNGG	3 cut(s)	592, 1103, 1176
BmrI	ACTGGG	1 cut(s)	1012
BmsI	GCATC	3 cut(s)	175, 1014, 1298
BmuI	ACTGGG	1 cut(s)	1012
BpiI	GAAGAC	2 cut(s)	608, 644
BsaAI	YACGTR	1 cut(s)	750
BsaBI	GATNNNNATC	1 cut(s)	299
BsaJI	CCNNGG	2 cut(s)	637, 1102
Bsc4I	CCNNNNNNNGG	2 cut(s)	597, 889
Bse1I	ACTGG	7 cut(s)	73, 517, 713, 943, 1007, 1122, 1200
Bse8I	GATNNNNATC	1 cut(s)	299
BseBI	CCWGG	3 cut(s)	592, 1103, 1176
BseDI	CCNNGG	2 cut(s)	637, 1102
BseGI	GGATG	5 cut(s)	300, 525, 587, 633, 1029
BseJI	GATNNNNATC	1 cut(s)	299
BseLI	CCNNNNNNNGG	2 cut(s)	597, 889
BseMII	CTCAG	1 cut(s)	150
BseNI	ACTGG	7 cut(s)	73, 517, 713, 943, 1007, 1122, 1200
BseRI	GAGGAG	1 cut(s)	1006
BseXI	GCAGC	2 cut(s)	356, 718
BseYI	CCCAGC	1 cut(s)	1222
Bsh1236I	CGCG	1 cut(s)	95
BsiHKAI	GWGCWC	1 cut(s)	998
BslFI	GGGAC	1 cut(s)	1240
BslI	CCNNNNNNNGG	2 cut(s)	597, 889
BsmAI	GTCTC	2 cut(s)	44, 494
BsmBI	CGTCTC	1 cut(s)	44
BsmFI	GGGAC	1 cut(s)	1240
BsmI	GAATGC	1 cut(s)	783
Bsp1286I	GDGCHC	1 cut(s)	998
Bsp143I	GATC	5 cut(s)	71, 382, 432, 523, 630
BspACI	CCGC	7 cut(s)	93, 130, 188, 768, 1066, 1213, 1368
BspCNI	CTCAG	1 cut(s)	149
BspFNI	CGCG	1 cut(s)	95
BspLI	GGNNCC	1 cut(s)	145
BspPI	GGATC	3 cut(s)	79, 377, 531
BsrI	ACTGG	7 cut(s)	73, 517, 713, 943, 1007, 1122, 1200
BssECI	CCNNGG	2 cut(s)	637, 1102
BssMI	GATC	5 cut(s)	71, 382, 432, 523, 630
BssT1I	CCWWGG	1 cut(s)	637
Bst2UI	CCWGG	3 cut(s)	592, 1103, 1176
Bst4CI	ACNGT	3 cut(s)	280, 774, 1054
Bst6I	CTCTTC	1 cut(s)	42
BstBAI	YACGTR	1 cut(s)	750
BstC8I	GCNNGC	2 cut(s)	573, 1146
BstDEI	CTNAG	3 cut(s)	136, 201, 268
BstEII	GGTNACC	1 cut(s)	809
BstF5I	GGATG	5 cut(s)	300, 525, 587, 633, 1029
BstFNI	CGCG	1 cut(s)	95
BstHHI	GCGC	1 cut(s)	97
BstKTI	GATC	5 cut(s)	74, 385, 435, 526, 633
BstMAI	GTCTC	2 cut(s)	44, 494
BstMBI	GATC	5 cut(s)	71, 382, 432, 523, 630
BstMWI	GCNNNNNNNGC	2 cut(s)	789, 1104
BstNI	CCWGG	3 cut(s)	592, 1103, 1176
BstNSI	RCATGY	2 cut(s)	223, 444
BstPI	GGTNACC	1 cut(s)	809
BstSCI	CCNGG	3 cut(s)	590, 1101, 1174
BstUI	CGCG	1 cut(s)	95
BstV1I	GCAGC	2 cut(s)	356, 718
BstV2I	GAAGAC	2 cut(s)	608, 644
BstX2I	RGATCY	2 cut(s)	382, 523
BstXI	CCANNNNNNTGG	1 cut(s)	670
BstYI	RGATCY	2 cut(s)	382, 523
BsuI	GTATCC	1 cut(s)	1270
BtrI	CACGTC	1 cut(s)	1072
BtsCI	GGATG	5 cut(s)	300, 525, 587, 633, 1029
BtsIMutI	CAGTG	4 cut(s)	276, 626, 706, 1115
Cac8I	GCNNGC	2 cut(s)	573, 1146
CaiI	CAGNNNCTG	1 cut(s)	1144
CfoI	GCGC	1 cut(s)	97
Csp6I	GTAC	5 cut(s)	395, 510, 704, 928, 1193
CviAII	CATG	4 cut(s)	220, 441, 686, 830
CviQI	GTAC	5 cut(s)	395, 510, 704, 928, 1193
DdeI	CTNAG	3 cut(s)	136, 201, 268
DpnI	GATC	5 cut(s)	73, 384, 434, 525, 632
DpnII	GATC	5 cut(s)	71, 382, 432, 523, 630
DrdI	GACNNNNNNGTC	2 cut(s)	73, 1070
DseDI	GACNNNNNNGTC	2 cut(s)	73, 1070
Eam1104I	CTCTTC	1 cut(s)	42
EarI	CTCTTC	1 cut(s)	42
Eco130I	CCWWGG	1 cut(s)	637
Eco57I	CTGAAG	2 cut(s)	451, 1173
Eco91I	GGTNACC	1 cut(s)	809
EcoO65I	GGTNACC	1 cut(s)	809
EcoRII	CCWGG	3 cut(s)	590, 1101, 1174
EcoT14I	CCWWGG	1 cut(s)	637
ErhI	CCWWGG	1 cut(s)	637
Esp3I	CGTCTC	1 cut(s)	44
FaeI	CATG	4 cut(s)	223, 444, 689, 833
FalI	AAGNNNNNCTT	2 cut(s)	1171, 1203
FaqI	GGGAC	1 cut(s)	1240
FatI	CATG	4 cut(s)	219, 440, 685, 829
FauI	CCCGC	1 cut(s)	775
FauNDI	CATATG	1 cut(s)	1207
FbaI	TGATCA	2 cut(s)	432, 630
FblI	GTMKAC	1 cut(s)	224
Fnu4HI	GCNGC	4 cut(s)	93, 131, 345, 732
FokI	GGATG	5 cut(s)	307, 532, 574, 620, 1036
Fsp4HI	GCNGC	4 cut(s)	93, 131, 345, 732
FspBI	CTAG	4 cut(s)	480, 621, 803, 1358
GlaI	GCGC	1 cut(s)	96
GluI	GCNGC	4 cut(s)	93, 131, 345, 732
GsaI	CCCAGC	1 cut(s)	1226
HhaI	GCGC	1 cut(s)	97
Hin1II	CATG	4 cut(s)	223, 444, 689, 833
Hin6I	GCGC	1 cut(s)	95
HinP1I	GCGC	1 cut(s)	95
HincII	GTYRAC	2 cut(s)	318, 463
HindII	GTYRAC	2 cut(s)	318, 463
HinfI	GANTC	2 cut(s)	5, 1017
HphI	GGTGA	1 cut(s)	1273
Hpy166II	GTNNAC	8 cut(s)	225, 274, 318, 463, 626, 673, 706, 1264
Hpy188I	TCNGA	5 cut(s)	120, 338, 470, 1165, 1376
Hpy188III	TCNNGA	2 cut(s)	1021, 1075
Hpy8I	GTNNAC	8 cut(s)	225, 274, 318, 463, 626, 673, 706, 1264
Hpy99I	CGWCG	2 cut(s)	79, 1076
HpyAV	CCTTC	3 cut(s)	31, 370, 1351
HpyCH4III	ACNGT	3 cut(s)	280, 774, 1054
HpyCH4IV	ACGT	5 cut(s)	37, 749, 762, 1071, 1094
HpyCH4V	TGCA	7 cut(s)	344, 608, 734, 753, 983, 1098, 1289
HpyF10VI	GCNNNNNNNGC	2 cut(s)	789, 1104
HpyF3I	CTNAG	3 cut(s)	136, 201, 268
HpySE526I	ACGT	5 cut(s)	37, 749, 762, 1071, 1094
Hsp92II	CATG	4 cut(s)	223, 444, 689, 833
HspAI	GCGC	1 cut(s)	95
Ksp22I	TGATCA	2 cut(s)	432, 630
Kzo9I	GATC	5 cut(s)	71, 382, 432, 523, 630
LmnI	GCTCC	2 cut(s)	149, 993
Lsp1109I	GCAGC	2 cut(s)	356, 718
LweI	GCATC	3 cut(s)	175, 1014, 1298
MaeI	CTAG	4 cut(s)	480, 621, 803, 1358
MaeII	ACGT	5 cut(s)	37, 749, 762, 1071, 1094
MaeIII	GTNAC	4 cut(s)	163, 324, 809, 1111
MalI	GATC	5 cut(s)	73, 384, 434, 525, 632
MboI	GATC	5 cut(s)	71, 382, 432, 523, 630
MflI	RGATCY	2 cut(s)	382, 523
MhlI	GDGCHC	1 cut(s)	998
MlyI	GAGTC	1 cut(s)	1026
MnlI	CCTC	5 cut(s)	659, 886, 984, 988, 1355
MseI	TTAA	3 cut(s)	759, 836, 1049
MslI	CAYNNNNRTG	1 cut(s)	445
MspR9I	CCNGG	3 cut(s)	592, 1103, 1176
Mva1269I	GAATGC	1 cut(s)	783
MvaI	CCWGG	3 cut(s)	592, 1103, 1176
MvnI	CGCG	1 cut(s)	95
MwoI	GCNNNNNNNGC	2 cut(s)	789, 1104
NdeI	CATATG	1 cut(s)	1207
NdeII	GATC	5 cut(s)	71, 382, 432, 523, 630
NlaIII	CATG	4 cut(s)	223, 444, 689, 833
NlaIV	GGNNCC	1 cut(s)	145
NmuCI	GTSAC	1 cut(s)	163
NspI	RCATGY	2 cut(s)	223, 444
PciI	ACATGT	1 cut(s)	219
PcsI	WCGNNNNNNNCGW	1 cut(s)	574
PctI	GAATGC	1 cut(s)	783
PfeI	GAWTC	1 cut(s)	5
PflMI	CCANNNNNTGG	1 cut(s)	597
PfoI	TCCNGGA	2 cut(s)	590, 1174
PkrI	GCNGC	4 cut(s)	94, 132, 346, 733
PleI	GAGTC	1 cut(s)	1025
PpsI	GAGTC	1 cut(s)	1025
Ppu21I	YACGTR	1 cut(s)	750
PscI	ACATGT	1 cut(s)	219
Psp1406I	AACGTT	1 cut(s)	762
Psp6I	CCWGG	3 cut(s)	590, 1101, 1174
PspEI	GGTNACC	1 cut(s)	809
PspFI	CCCAGC	1 cut(s)	1222
PspGI	CCWGG	3 cut(s)	590, 1101, 1174
PspN4I	GGNNCC	1 cut(s)	145
PstNI	CAGNNNCTG	1 cut(s)	1144
PsuI	RGATCY	2 cut(s)	382, 523
RsaI	GTAC	5 cut(s)	396, 511, 705, 929, 1194
RsaNI	GTAC	5 cut(s)	395, 510, 704, 928, 1193
RseI	CAYNNNNRTG	1 cut(s)	445
SaqAI	TTAA	3 cut(s)	759, 836, 1049
SatI	GCNGC	4 cut(s)	93, 131, 345, 732
Sau3AI	GATC	5 cut(s)	71, 382, 432, 523, 630
ScaI	AGTACT	1 cut(s)	1194
SchI	GAGTC	1 cut(s)	1026
ScrFI	CCNGG	3 cut(s)	592, 1103, 1176
SduI	GDGCHC	1 cut(s)	998
SfaNI	GCATC	3 cut(s)	175, 1014, 1298
SmiMI	CAYNNNNRTG	1 cut(s)	445
SsiI	CCGC	7 cut(s)	93, 130, 188, 768, 1066, 1213, 1368
SspMI	CTAG	4 cut(s)	480, 621, 803, 1358
StyD4I	CCNGG	3 cut(s)	590, 1101, 1174
StyI	CCWWGG	1 cut(s)	637
TaaI	ACNGT	3 cut(s)	280, 774, 1054
TaiI	ACGT	5 cut(s)	40, 752, 765, 1074, 1097
TaqI	TCGA	3 cut(s)	77, 237, 1074
TaqII	GACCGA	1 cut(s)	512
TatI	WGTACW	2 cut(s)	703, 1192
TauI	GCSGC	2 cut(s)	95, 133
TfiI	GAWTC	1 cut(s)	5
Tru1I	TTAA	3 cut(s)	759, 836, 1049
Tru9I	TTAA	3 cut(s)	759, 836, 1049
TscAI	CASTG	4 cut(s)	283, 633, 713, 1122
TseFI	GTSAC	1 cut(s)	163
TseI	GCWGC	2 cut(s)	344, 731
Tsp45I	GTSAC	1 cut(s)	163
TspDTI	ATGAA	3 cut(s)	546, 674, 873
TspGWI	ACGGA	1 cut(s)	714
TspRI	CASTG	4 cut(s)	283, 633, 713, 1122
Van91I	CCANNNNNTGG	1 cut(s)	597
XapI	RAATTY	5 cut(s)	471, 553, 712, 1132, 1382
XceI	RCATGY	2 cut(s)	223, 444
XmiI	GTMKAC	1 cut(s)	224
XspI	CTAG	4 cut(s)	480, 621, 803, 1358
ZrmI	AGTACT	1 cut(s)	1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.