Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005644

Physical Location & Seq

Genomic Coordinates Forward (+)

13956377 .. 13959347

Gene Structure 2971 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G156800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 972 bp

ATGTCAAAGAGAAAGCCAAACAAAAACAAAGGACCCGCTATCATCGACCTCGACCTCGACTCTTCCGACCTCGACTCTCCAATTTCAGAGCTTTTCAGATATGAGGTGTCAAAACATCGCTCATGTTGGAGGCACGTCTTCGCCTATTTGATAGTTCAAAAAAAGAAATTAGCTCTAAAAGATATTGAACTGATAAAGAAGAGATACCCGTGCCTTTTAGAATTCCCTTGCCGCTTCCATCGTGGTGAGAGATTGAAGAGGAAAGGGAAAAGAGAAGAGATGAAAGAACTGAGACCACCCAAGGATGCCAAGAATGCTGTCTCAAGAAAAAAAGAAAAACTAGACTCTCAAGCATTTGAGTGTAAAGAAAAGCTAGGCTCTGAAGCATTTGATCGTTACTTTCAGAACTTATGGAAGAATTTATCAGAGGATAAGAGGACTTCTTTCGCGTACCTTGACTGTATGTGGTTTAGCTTGTACTTGCAACCATCCTCCAGAGACAAGGTGCTGACCTGGATTAAGAAGAAGCATATTTTCTCAAAGAAATATGTCATTGTTCCTATCGTTTGCTGGGGTCACTGGAACCTATTAATCTTTTGCCATTTTGGTGAGAGTGAGCAATCAGAAACCCATAAACCATGCATGTTGTTGCTTGATTCTCTTGAAAACGCAGATCCAAGGCGGTATGAACCAGATATAAGAAAATTTGTACTAGACATTTATGAAGCAGAGGGCAGGTCTGAGACCAAAGATTTTATCTATCGAATTCCTTTCTTGGTTCCTAAGGTGCCACAACAGAGAAATGATGTAGAATGCGGTAACTTTGTTCTCTACTACATCAATTTGTTCATTGAGGGTGCTCCTGAGAATTTCAGCATTGAGGGCGGCTACCCATACTTTATGAAAAAAAATTGGTTTACCCCTGAAGGCTTGGAGTGTTTCTGCCAGCAACTATATTCCTCTTCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009628 GO:0009651 GO:0009791 GO:0009987 GO:0010228 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

324

Amino Acids

38.47

Weight (kDa)

8.99

Isoelectric Point (pI)

57.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48480
fragaria_vesca	FvH4_3g25530 FvH4_5g07530
malus_domestica	MD14G1163400.v1.1
prunus_persica	Prupe.5G156800_v2.0.a1 Prupe.5G156800_v2.0.a1
pyrus_communis	pycom14g13600
rosa_chinensis	RchiOBHm_Chr7g0191071
rosa_laevigata	RLG00000004477
rosa_multiflora	Rmu_co8255195.1_g000001 Rmu_sc0005903.1_g000007
rosa_roxburghii	Rroxscaffold_3G00264060
rosa_rugosa	Rorug01G0316800 Rorug01G0316900 Rorug01G0316900 Rorug06G0508100 Rorug06G0508200
rosa_samantha	Rh1CG137300 Rh1DG152400 Rh1DG152500 Rh7AG115700 Rh7AG115800 Rh7BG117700 Rh7BG117800 Rh7DG119400
rosa_wichuraiana	Rw1G028850 Rw7G010060 Rw7G010150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	726
AccB1I	GGYRCC	1 cut(s)	787
AccII	CGCG	1 cut(s)	449
AciI	CCGC	5 cut(s)	36, 232, 682, 816, 885
AclWI	GGATC	1 cut(s)	668
AcsI	RAATTY	5 cut(s)	221, 418, 704, 765, 868
AcuI	CTGAAG	3 cut(s)	402, 945, 948
AfaI	GTAC	3 cut(s)	452, 479, 711
AgsI	TTSAA	4 cut(s)	158, 188, 256, 665
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	1 cut(s)	512
AluBI	AGCT	4 cut(s)	91, 173, 373, 474
AluI	AGCT	4 cut(s)	91, 173, 373, 474
Alw21I	GWGCWC	1 cut(s)	862
Alw26I	GTCTC	4 cut(s)	286, 325, 492, 737
AlwI	GGATC	1 cut(s)	668
ApoI	RAATTY	5 cut(s)	221, 418, 704, 765, 868
AseI	ATTAAT	1 cut(s)	590
AspS9I	GGNCC	1 cut(s)	32
AsuHPI	GGTGA	2 cut(s)	257, 620
AvaII	GGWCC	1 cut(s)	32
AxyI	CCTNAGG	1 cut(s)	783
BanI	GGYRCC	1 cut(s)	787
BbsI	GAAGAC	1 cut(s)	130
Bbv12I	GWGCWC	1 cut(s)	862
BccI	CCATC	2 cut(s)	246, 496
BciT130I	CCWGG	1 cut(s)	514
BcoDI	GTCTC	4 cut(s)	286, 325, 492, 737
BfaI	CTAG	3 cut(s)	341, 374, 713
BfuAI	ACCTGC	1 cut(s)	726
BisI	GCNGC	2 cut(s)	232, 886
BlsI	GCNGC	2 cut(s)	233, 887
Bme1390I	CCNGG	1 cut(s)	514
Bme18I	GGWCC	1 cut(s)	32
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	1 cut(s)	32
BmiI	GGNNCC	4 cut(s)	34, 584, 780, 789
BmrFI	CCNGG	1 cut(s)	514
BmsI	GCATC	1 cut(s)	295
BpiI	GAAGAC	1 cut(s)	130
BpmI	CTGGAG	1 cut(s)	478
BpuEI	CTTGAG	2 cut(s)	307, 333
BsaI	GGTCTC	2 cut(s)	286, 737
BsaJI	CCNNGG	2 cut(s)	300, 677
Bse1I	ACTGG	1 cut(s)	584
Bse21I	CCTNAGG	1 cut(s)	783
BseBI	CCWGG	1 cut(s)	514
BseDI	CCNNGG	2 cut(s)	300, 677
BseGI	GGATG	2 cut(s)	310, 488
BseMII	CTCAG	3 cut(s)	281, 732, 855
BseNI	ACTGG	1 cut(s)	584
BseYI	CCCAGC	1 cut(s)	570
Bsh1236I	CGCG	1 cut(s)	449
BshNI	GGYRCC	1 cut(s)	787
BsiHKAI	GWGCWC	1 cut(s)	862
BsmAI	GTCTC	4 cut(s)	286, 325, 492, 737
BsmI	GAATGC	2 cut(s)	319, 818
Bso31I	GGTCTC	2 cut(s)	286, 737
Bsp1286I	GDGCHC	1 cut(s)	862
Bsp143I	GATC	2 cut(s)	391, 673
BspACI	CCGC	5 cut(s)	36, 232, 682, 816, 885
BspCNI	CTCAG	3 cut(s)	282, 733, 856
BspFNI	CGCG	1 cut(s)	449
BspLI	GGNNCC	4 cut(s)	34, 584, 780, 789
BspMI	ACCTGC	1 cut(s)	726
BspPI	GGATC	1 cut(s)	668
BspT107I	GGYRCC	1 cut(s)	787
BspTNI	GGTCTC	2 cut(s)	286, 737
BsrI	ACTGG	1 cut(s)	584
BssECI	CCNNGG	2 cut(s)	300, 677
BssMI	GATC	2 cut(s)	391, 673
BssT1I	CCWWGG	2 cut(s)	300, 677
Bst2UI	CCWGG	1 cut(s)	514
Bst4CI	ACNGT	1 cut(s)	461
Bst6I	CTCTTC	5 cut(s)	67, 194, 251, 270, 967
BstC8I	GCNNGC	1 cut(s)	947
BstDEI	CTNAG	4 cut(s)	290, 741, 783, 864
BstF5I	GGATG	2 cut(s)	310, 488
BstFNI	CGCG	1 cut(s)	449
BstKTI	GATC	2 cut(s)	394, 676
BstMAI	GTCTC	4 cut(s)	286, 325, 492, 737
BstMBI	GATC	2 cut(s)	391, 673
BstMWI	GCNNNNNNNGC	2 cut(s)	314, 882
BstNI	CCWGG	1 cut(s)	514
BstNSI	RCATGY	1 cut(s)	646
BstSCI	CCNGG	1 cut(s)	512
BstUI	CGCG	1 cut(s)	449
BstV2I	GAAGAC	1 cut(s)	130
BstX2I	RGATCY	1 cut(s)	673
BstYI	RGATCY	1 cut(s)	673
Bsu36I	CCTNAGG	1 cut(s)	783
BtgZI	GCGATG	1 cut(s)	101
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	2 cut(s)	310, 488
BtsIMutI	CAGTG	1 cut(s)	577
BveI	ACCTGC	1 cut(s)	726
Cac8I	GCNNGC	1 cut(s)	947
Cfr13I	GGNCC	1 cut(s)	32
Csp6I	GTAC	3 cut(s)	451, 478, 710
CviAII	CATG	3 cut(s)	123, 639, 643
CviJI	RGCY	8 cut(s)	16, 91, 173, 373, 378, 474, 888, 930
CviKI_1	RGCY	8 cut(s)	16, 91, 173, 373, 378, 474, 888, 930
CviQI	GTAC	3 cut(s)	451, 478, 710
DdeI	CTNAG	4 cut(s)	290, 741, 783, 864
DpnI	GATC	2 cut(s)	393, 675
DpnII	GATC	2 cut(s)	391, 673
Eam1104I	CTCTTC	5 cut(s)	67, 194, 251, 270, 967
EarI	CTCTTC	5 cut(s)	67, 194, 251, 270, 967
Eco130I	CCWWGG	2 cut(s)	300, 677
Eco31I	GGTCTC	2 cut(s)	286, 737
Eco47I	GGWCC	1 cut(s)	32
Eco57I	CTGAAG	3 cut(s)	402, 945, 948
Eco81I	CCTNAGG	1 cut(s)	783
EcoO109I	RGGNCCY	1 cut(s)	32
EcoRI	GAATTC	2 cut(s)	221, 765
EcoRII	CCWGG	1 cut(s)	512
EcoT14I	CCWWGG	2 cut(s)	300, 677
EcoT22I	ATGCAT	1 cut(s)	644
ErhI	CCWWGG	2 cut(s)	300, 677
FaeI	CATG	3 cut(s)	126, 642, 646
FatI	CATG	3 cut(s)	122, 638, 642
FauI	CCCGC	1 cut(s)	43
Fnu4HI	GCNGC	2 cut(s)	232, 886
FokI	GGATG	2 cut(s)	317, 475
Fsp4HI	GCNGC	2 cut(s)	232, 886
FspBI	CTAG	3 cut(s)	341, 374, 713
GluI	GCNGC	2 cut(s)	232, 886
GsaI	CCCAGC	1 cut(s)	574
GsuI	CTGGAG	1 cut(s)	478
Hin1II	CATG	3 cut(s)	126, 642, 646
HinfI	GANTC	4 cut(s)	59, 74, 344, 656
HphI	GGTGA	2 cut(s)	257, 620
Hpy166II	GTNNAC	1 cut(s)	918
Hpy188I	TCNGA	9 cut(s)	67, 88, 98, 382, 405, 427, 625, 742, 967
Hpy188III	TCNNGA	4 cut(s)	324, 495, 662, 863
Hpy8I	GTNNAC	1 cut(s)	918
HpyAV	CCTTC	1 cut(s)	920
HpyCH4III	ACNGT	1 cut(s)	461
HpyCH4IV	ACGT	1 cut(s)	135
HpyCH4V	TGCA	2 cut(s)	484, 642
HpyF10VI	GCNNNNNNNGC	2 cut(s)	314, 882
HpyF3I	CTNAG	4 cut(s)	290, 741, 783, 864
HpySE526I	ACGT	1 cut(s)	135
Hsp92II	CATG	3 cut(s)	126, 642, 646
Kzo9I	GATC	2 cut(s)	391, 673
LmnI	GCTCC	1 cut(s)	865
LweI	GCATC	1 cut(s)	295
MaeI	CTAG	3 cut(s)	341, 374, 713
MaeII	ACGT	1 cut(s)	135
MaeIII	GTNAC	3 cut(s)	395, 575, 818
MalI	GATC	2 cut(s)	393, 675
MboI	GATC	2 cut(s)	391, 673
MboII	GAAGA	8 cut(s)	54, 130, 211, 268, 287, 427, 535, 954
MflI	RGATCY	1 cut(s)	673
MhlI	GDGCHC	1 cut(s)	862
MluCI	AATT	9 cut(s)	81, 167, 221, 418, 704, 765, 841, 868, 910
MlyI	GAGTC	3 cut(s)	53, 68, 338
MmeI	TCCRAC	2 cut(s)	90, 107
Mph1103I	ATGCAT	1 cut(s)	644
MseI	TTAA	2 cut(s)	519, 590
MslI	CAYNNNNRTG	3 cut(s)	243, 358, 606
MspR9I	CCNGG	1 cut(s)	514
Mva1269I	GAATGC	2 cut(s)	319, 818
MvaI	CCWGG	1 cut(s)	514
MvnI	CGCG	1 cut(s)	449
MwoI	GCNNNNNNNGC	2 cut(s)	314, 882
NdeII	GATC	2 cut(s)	391, 673
NlaIII	CATG	3 cut(s)	126, 642, 646
NlaIV	GGNNCC	4 cut(s)	34, 584, 780, 789
NmuCI	GTSAC	1 cut(s)	575
NsiI	ATGCAT	1 cut(s)	644
NspI	RCATGY	1 cut(s)	646
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	2 cut(s)	319, 818
PfeI	GAWTC	1 cut(s)	656
PkrI	GCNGC	2 cut(s)	233, 887
PleI	GAGTC	3 cut(s)	53, 68, 338
PpsI	GAGTC	3 cut(s)	53, 68, 338
PpuMI	RGGWCCY	1 cut(s)	32
PshBI	ATTAAT	1 cut(s)	590
Psp5II	RGGWCCY	1 cut(s)	32
Psp6I	CCWGG	1 cut(s)	512
PspFI	CCCAGC	1 cut(s)	570
PspGI	CCWGG	1 cut(s)	512
PspN4I	GGNNCC	4 cut(s)	34, 584, 780, 789
PspPI	GGNCC	1 cut(s)	32
PspPPI	RGGWCCY	1 cut(s)	32
PsuI	RGATCY	1 cut(s)	673
RsaI	GTAC	3 cut(s)	452, 479, 711
RsaNI	GTAC	3 cut(s)	451, 478, 710
RseI	CAYNNNNRTG	3 cut(s)	243, 358, 606
SaqAI	TTAA	2 cut(s)	519, 590
SatI	GCNGC	2 cut(s)	232, 886
Sau3AI	GATC	2 cut(s)	391, 673
Sau96I	GGNCC	1 cut(s)	32
SchI	GAGTC	3 cut(s)	53, 68, 338
ScrFI	CCNGG	1 cut(s)	514
SduI	GDGCHC	1 cut(s)	862
SfaNI	GCATC	1 cut(s)	295
SinI	GGWCC	1 cut(s)	32
SmiMI	CAYNNNNRTG	3 cut(s)	243, 358, 606
SmlI	CTYRAG	2 cut(s)	322, 348
SmoI	CTYRAG	2 cut(s)	322, 348
Sse9I	AATT	9 cut(s)	81, 167, 221, 418, 704, 765, 841, 868, 910
SsiI	CCGC	5 cut(s)	36, 232, 682, 816, 885
SspMI	CTAG	3 cut(s)	341, 374, 713
StyD4I	CCNGG	1 cut(s)	512
StyI	CCWWGG	2 cut(s)	300, 677
TaaI	ACNGT	1 cut(s)	461
TaiI	ACGT	1 cut(s)	138
TaqI	TCGA	5 cut(s)	45, 51, 57, 72, 763
TasI	AATT	9 cut(s)	81, 167, 221, 418, 704, 765, 841, 868, 910
TatI	WGTACW	2 cut(s)	477, 709
TauI	GCSGC	2 cut(s)	234, 888
TfiI	GAWTC	1 cut(s)	656
Tru1I	TTAA	2 cut(s)	519, 590
Tru9I	TTAA	2 cut(s)	519, 590
TscAI	CASTG	1 cut(s)	584
TseFI	GTSAC	1 cut(s)	575
Tsp45I	GTSAC	1 cut(s)	575
TspDTI	ATGAA	5 cut(s)	296, 702, 738, 838, 917
TspRI	CASTG	1 cut(s)	584
VpaK11BI	GGWCC	1 cut(s)	32
VspI	ATTAAT	1 cut(s)	590
XapI	RAATTY	5 cut(s)	221, 418, 704, 765, 868
XceI	RCATGY	1 cut(s)	646
XspI	CTAG	3 cut(s)	341, 374, 713
Zsp2I	ATGCAT	1 cut(s)	644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.