Prupe.5G185300_v2.0.a1

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15382920 .. 15385563
2644 bp
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UTR
Exon/CDS
Intron
Prupe.5G185300.1

Sequence Viewer

Length: 1797 bp
ATGGAGAATGTGAATGATTCTTCTTCACTACGGGAAGACCCTCCTCTAAACCCACCTTCTTCTAATGCAAGAAAACCAGGAGGATGGAGAGCTATCAAATACATTCTTGCAAACGAGTCGTTCGAGAAGCTGGCTTCAATGAGTTTGATAGCCAATATCACAGTGTACCTGACCACAAGATACAACTTGAGTGGTATATTTGTGGTAAATGTGGTTAATATTTGGAATGGTTCATCCAATGTTGCATCACTAGCAGGAGCTTTTGTTTCTGATGCTTATCTGGGCAGGTTTCGTACCCTCATTTTGGGCTCCATATCATCTATCCTGGGTATGGGAGCCATGACCATTACTGCAAGTATAAATCAATTACGACCCCCCACCTGCAAAGAGCCACCCCATTGCCCTGAGCCCCAAAGTTGGCAGCTGGGCTTTCTTTTCCTGGCTCTTGCATTGCTGTCAATAGGAGCAGGAGGGATTAGGCCCTGCAACATTGCCTTTGGTGCTGACCAATTTGACACCAAGACAGCTAAAGGAAGAGCACAACTAGAAAGCTTTTTCAATTGGTGGTATTTCTCTTTCACAGTTGCTCTAGTTGTGGCCCTCACCATAGTTGTGTACATTCAGACTAATGTCAGCTGGACCATAGGCTTTGTTATTCCCACTGTCTGCCTTGCTTCCTCCATATCGATTTTCTTGTTCGGCCGCCACACTTACGTTTACTTGAAGCCTCAAGGCAGCATCTTTTCAGACATAGCAAAGGTGATCACAGCTTCCTGTAGAAAATGCAGGGTTCCCGTTGGACAGGCTTCCGAGCACTCATTTTATGATCCTCCTCTAATTACTAATGCATCTGATCAAACACAGATGATCTTGAAGCTCCCTCACACTAATAGGTTCAGGTTCCTGGACAGATCTGCTATAATAACTAGCCCAGATGAATTGGACAATCAAGGGAAGCCTAAGAGTGGTTGGAGACTATGTAGTCTCCAACAAGTTGAGCAACTCAAGTGCTTAGTGGCAATTCTGCCAGTTTGGATAACAGCAATTGGAACTTTCATGTCCGTGGACCAACAGAACACATTTGGGGTCTTACAAGCATTGCAAATGGACAGATCCATTGGACCCAAGTTCAAATTCTCACCAGGTTGGCTGAATATCATATCCATGCTTGCACTTGCAATATGGATCTTCTTCTATGAGCGCATTTACCTCCCTCTAGCCCAAAAAAAGAGTACGAGGAGGAACAAAAGACTGACAATGCAACAGAGGATTAATACTGGCATTATGTTGTCAATTGTGTCAATGTTAGTATCTGGGATCGTTGAAGAACACCGTCGAAAATCGGCTTTGAGACATGGATCATACATCTCACCCTCAAGCTTTGCATTGCTCTTGCCACAATTTTTCTTATCAGGATTGACTGAGGCCTTTTCTGCTGTTTCCATAATGGAATTTTTCACCATGCAAATGCCGGAGAGTATGAGGACTATTGCTGGGGCAGTCTTCTTTCTTAGCTTATCCATTTCAAGCTATATAGGCTCCTTGATAGTCAATATAGTCCACAAGGCAACTGAAAAGAAGGCTAAATCTCCATGGCTAGGTGGTCATGACCTTAACCAGAATAGGCTGAACTATTACTACTACATCATTGCTGGCCTGGGGGTTCTTAATCTTGTGTACTTCAATCTCTTTGCTCGGCGTTACGTGTTAGTTGGAAGACCTGGTAATGGGATAAAGGAGATGCAGTTAGAGAATCCAGTTCTTCATGGTTCAAGAGATCAGTCCGAATGTGCATGA

Protein Analysis

599

Amino Acids

66.58

Weight (kDa)

9.58

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 389
AasI GACNNNNNNGTC 1 cut(s) 981
Acc36I ACCTGC 2 cut(s) 276, 389
AciI CCGC 1 cut(s) 703
AclWI GGATC 5 cut(s) 821, 1107, 1193, 1325, 1366
AcoI YGGCCR 1 cut(s) 700
AcsI RAATTY 2 cut(s) 1133, 1451
AfaI GTAC 5 cut(s) 167, 295, 617, 1234, 1679
AfiI CCNNNNNNNGG 6 cut(s) 304, 331, 417, 965, 1598, 1727
AflIII ACRYGT 1 cut(s) 1704
AgsI TTSAA 9 cut(s) 138, 559, 724, 874, 1132, 1325, 1527, 1684, 1773
AjnI CCWGG 7 cut(s) 76, 324, 438, 903, 1141, 1656, 1720
AjuI GAANNNNNNNTTGG 2 cut(s) 1118, 1150
Alw21I GWGCWC 2 cut(s) 541, 816
Alw26I GTCTC 3 cut(s) 967, 989, 1345
AlwI GGATC 5 cut(s) 821, 1107, 1193, 1325, 1366
AoxI GGCC 5 cut(s) 479, 597, 700, 1425, 1654
ApeKI GCWGC 2 cut(s) 421, 735
ApoI RAATTY 2 cut(s) 1133, 1451
AseI ATTAAT 1 cut(s) 1272
AspLEI GCGC 1 cut(s) 1203
AspS9I GGNCC 5 cut(s) 480, 598, 639, 1066, 1121
AsuHPI GGTGA 5 cut(s) 595, 772, 1131, 1362, 1450
AvaII GGWCC 3 cut(s) 639, 1066, 1121
BanII GRGCYC 2 cut(s) 311, 411
BbsI GAAGAC 3 cut(s) 42, 1495, 1723
Bbv12I GWGCWC 2 cut(s) 541, 816
BbvI GCAGC 2 cut(s) 433, 747
BccI CCATC 1 cut(s) 78
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BciT130I CCWGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
BclI TGATCA 2 cut(s) 762, 853
BcoDI GTCTC 3 cut(s) 967, 989, 1345
BfaI CTAG 6 cut(s) 251, 545, 590, 927, 1217, 1598
BfmI CTRYAG 1 cut(s) 775
BfuAI ACCTGC 2 cut(s) 276, 389
BglII AGATCT 1 cut(s) 911
BisI GCNGC 3 cut(s) 422, 703, 736
BlsI GCNGC 3 cut(s) 423, 704, 737
Bme1390I CCNGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
Bme18I GGWCC 3 cut(s) 639, 1066, 1121
BmgT120I GGNCC 5 cut(s) 480, 598, 639, 1066, 1121
BmiI GGNNCC 6 cut(s) 310, 337, 792, 902, 1123, 1540
BmrFI CCNGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
BmsI GCATC 5 cut(s) 254, 262, 747, 857, 1731
BoxI GACNNNNGTC 1 cut(s) 629
BpiI GAAGAC 3 cut(s) 42, 1495, 1723
Bpu10I CCTNAGC 1 cut(s) 405
BpuEI CTTGAG 4 cut(s) 208, 714, 989, 1360
Bsa29I ATCGAT 1 cut(s) 686
BsaAI YACGTR 1 cut(s) 1705
BsaBI GATNNNNATC 1 cut(s) 276
BsaJI CCNNGG 4 cut(s) 325, 1062, 1592, 1657
BsaXI ACNNNNNCTCC 6 cut(s) 249, 279, 964, 994, 1730, 1760
Bsc4I CCNNNNNNNGG 6 cut(s) 304, 331, 417, 965, 1598, 1727
Bse1I ACTGG 3 cut(s) 1028, 1282, 1757
Bse3DI GCAATG 6 cut(s) 397, 449, 489, 1097, 1385, 1647
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
BseCI ATCGAT 1 cut(s) 686
BseDI CCNNGG 4 cut(s) 325, 1062, 1592, 1657
BseGI GGATG 2 cut(s) 89, 233
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 6 cut(s) 304, 331, 417, 965, 1598, 1727
BseMI GCAATG 6 cut(s) 397, 449, 489, 1097, 1385, 1647
BseMII CTCAG 2 cut(s) 396, 1413
BseNI ACTGG 3 cut(s) 1028, 1282, 1757
BseRI GAGGAG 3 cut(s) 33, 822, 1252
BseX3I CGGCCG 1 cut(s) 700
BseXI GCAGC 2 cut(s) 433, 747
BseYI CCCAGC 2 cut(s) 424, 1493
Bsh1285I CGRYCG 1 cut(s) 703
BshFI GGCC 5 cut(s) 481, 599, 702, 1427, 1656
BshVI ATCGAT 1 cut(s) 686
BsiEI CGRYCG 1 cut(s) 703
BsiHKAI GWGCWC 2 cut(s) 541, 816
BsiSI CCGG 1 cut(s) 1472
BslI CCNNNNNNNGG 6 cut(s) 304, 331, 417, 965, 1598, 1727
BsmAI GTCTC 3 cut(s) 967, 989, 1345
BsnI GGCC 5 cut(s) 481, 599, 702, 1427, 1656
Bsp1286I GDGCHC 4 cut(s) 311, 411, 541, 816
Bsp1407I TGTACA 1 cut(s) 615
Bsp19I CCATGG 1 cut(s) 1592
BspACI CCGC 1 cut(s) 703
BspANI GGCC 5 cut(s) 481, 599, 702, 1427, 1656
BspCNI CTCAG 2 cut(s) 397, 1414
BspDI ATCGAT 1 cut(s) 686
BspHI TCATGA 1 cut(s) 1606
BspLI GGNNCC 6 cut(s) 310, 337, 792, 902, 1123, 1540
BspMI ACCTGC 2 cut(s) 276, 389
BspPI GGATC 5 cut(s) 821, 1107, 1193, 1325, 1366
BspQI GCTCTTC 1 cut(s) 529
BsrDI GCAATG 6 cut(s) 397, 449, 489, 1097, 1385, 1647
BsrGI TGTACA 1 cut(s) 615
BsrI ACTGG 3 cut(s) 1028, 1282, 1757
BssECI CCNNGG 4 cut(s) 325, 1062, 1592, 1657
BssT1I CCWWGG 1 cut(s) 1592
Bst2UI CCWGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
Bst4CI ACNGT 4 cut(s) 163, 583, 664, 1334
Bst6I CTCTTC 1 cut(s) 529
BstAUI TGTACA 1 cut(s) 615
BstBAI YACGTR 1 cut(s) 1705
BstC8I GCNNGC 3 cut(s) 132, 1170, 1654
BstDEI CTNAG 5 cut(s) 405, 960, 1012, 1422, 1511
BstDSI CCRYGG 2 cut(s) 1062, 1592
BstF5I GGATG 2 cut(s) 89, 233
BstHHI GCGC 1 cut(s) 1203
BstMAI GTCTC 3 cut(s) 967, 989, 1345
BstMCI CGRYCG 1 cut(s) 703
BstMWI GCNNNNNNNGC 4 cut(s) 251, 500, 1433, 1536
BstNI CCWGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
BstPAI GACNNNNGTC 1 cut(s) 629
BstSCI CCNGG 7 cut(s) 76, 324, 438, 903, 1141, 1656, 1720
BstSFI CTRYAG 1 cut(s) 775
BstV1I GCAGC 2 cut(s) 433, 747
BstV2I GAAGAC 3 cut(s) 42, 1495, 1723
BstX2I RGATCY 3 cut(s) 911, 1112, 1185
BstXI CCANNNNNNTGG 1 cut(s) 84
BstYI RGATCY 3 cut(s) 911, 1112, 1185
BstZI CGGCCG 1 cut(s) 700
Bsu15I ATCGAT 1 cut(s) 686
BsuRI GGCC 5 cut(s) 481, 599, 702, 1427, 1656
BsuTUI ATCGAT 1 cut(s) 686
BtgI CCRYGG 2 cut(s) 1062, 1592
BtsCI GGATG 2 cut(s) 89, 233
BtsIMutI CAGTG 2 cut(s) 168, 660
BveI ACCTGC 2 cut(s) 276, 389
Cac8I GCNNGC 3 cut(s) 132, 1170, 1654
CciI TCATGA 1 cut(s) 1606
CfoI GCGC 1 cut(s) 1203
Cfr13I GGNCC 5 cut(s) 480, 598, 639, 1066, 1121
ClaI ATCGAT 1 cut(s) 686
CsiI ACCWGGT 2 cut(s) 1141, 1720
Csp6I GTAC 5 cut(s) 166, 294, 616, 1233, 1678
CspCI CAANNNNNGTGG 2 cut(s) 172, 207
CviAII CATG 9 cut(s) 340, 1057, 1165, 1355, 1462, 1593, 1607, 1766, 1794
CviQI GTAC 5 cut(s) 166, 294, 616, 1233, 1678
DdeI CTNAG 5 cut(s) 405, 960, 1012, 1422, 1511
DrdI GACNNNNNNGTC 1 cut(s) 981
DseDI GACNNNNNNGTC 1 cut(s) 981
EaeI YGGCCR 1 cut(s) 700
EagI CGGCCG 1 cut(s) 700
Eam1104I CTCTTC 1 cut(s) 529
EarI CTCTTC 1 cut(s) 529
EclXI CGGCCG 1 cut(s) 700
Eco130I CCWWGG 1 cut(s) 1592
Eco147I AGGCCT 1 cut(s) 1427
Eco24I GRGCYC 2 cut(s) 311, 411
Eco47I GGWCC 3 cut(s) 639, 1066, 1121
Eco52I CGGCCG 1 cut(s) 700
EcoO109I RGGNCCY 1 cut(s) 480
EcoRII CCWGG 7 cut(s) 76, 324, 438, 903, 1141, 1656, 1720
EcoT14I CCWWGG 1 cut(s) 1592
EcoT22I ATGCAT 1 cut(s) 850
EcoT38I GRGCYC 2 cut(s) 311, 411
ErhI CCWWGG 1 cut(s) 1592
FaeI CATG 9 cut(s) 343, 1060, 1168, 1358, 1465, 1596, 1610, 1769, 1797
FatI CATG 9 cut(s) 339, 1056, 1164, 1354, 1461, 1592, 1606, 1765, 1793
FbaI TGATCA 2 cut(s) 762, 853
Fnu4HI GCNGC 3 cut(s) 422, 703, 736
FokI GGATG 2 cut(s) 96, 220
FriOI GRGCYC 2 cut(s) 311, 411
Fsp4HI GCNGC 3 cut(s) 422, 703, 736
FspBI CTAG 6 cut(s) 251, 545, 590, 927, 1217, 1598
GlaI GCGC 1 cut(s) 1202
GluI GCNGC 3 cut(s) 422, 703, 736
GsaI CCCAGC 2 cut(s) 428, 1497
HaeIII GGCC 5 cut(s) 481, 599, 702, 1427, 1656
HapII CCGG 1 cut(s) 1472
HhaI GCGC 1 cut(s) 1203
Hin1II CATG 9 cut(s) 343, 1060, 1168, 1358, 1465, 1596, 1610, 1769, 1797
Hin6I GCGC 1 cut(s) 1201
HinP1I GCGC 1 cut(s) 1201
HindIII AAGCTT 2 cut(s) 550, 1378
HinfI GANTC 3 cut(s) 17, 116, 1753
HpaII CCGG 1 cut(s) 1472
HphI GGTGA 5 cut(s) 595, 772, 1131, 1362, 1450
Hpy166II GTNNAC 6 cut(s) 166, 616, 718, 1066, 1561, 1678
Hpy188I TCNGA 6 cut(s) 271, 624, 748, 811, 853, 1786
Hpy188III TCNNGA 5 cut(s) 124, 871, 1413, 1607, 1773
Hpy8I GTNNAC 6 cut(s) 166, 616, 718, 1066, 1561, 1678
Hpy99I CGWCG 1 cut(s) 1338
HpyAV CCTTC 2 cut(s) 66, 1573
HpyCH4III ACNGT 4 cut(s) 163, 583, 664, 1334
HpyCH4IV ACGT 2 cut(s) 714, 1704
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 500, 1433, 1536
HpyF3I CTNAG 5 cut(s) 405, 960, 1012, 1422, 1511
HpySE526I ACGT 2 cut(s) 714, 1704
Hsp92II CATG 9 cut(s) 343, 1060, 1168, 1358, 1465, 1596, 1610, 1769, 1797
HspAI GCGC 1 cut(s) 1201
Ksp22I TGATCA 2 cut(s) 762, 853
LguI GCTCTTC 1 cut(s) 529
LmnI GCTCC 6 cut(s) 257, 314, 335, 464, 882, 1544
Lsp1109I GCAGC 2 cut(s) 433, 747
LweI GCATC 5 cut(s) 254, 262, 747, 857, 1731
MabI ACCWGGT 2 cut(s) 1141, 1720
MaeI CTAG 6 cut(s) 251, 545, 590, 927, 1217, 1598
MaeII ACGT 2 cut(s) 714, 1704
MaeIII GTNAC 1 cut(s) 1700
MfeI CAATTG 3 cut(s) 559, 1044, 1293
MflI RGATCY 3 cut(s) 911, 1112, 1185
MhlI GDGCHC 4 cut(s) 311, 411, 541, 816
MlyI GAGTC 1 cut(s) 125
MmeI TCCRAC 4 cut(s) 778, 950, 1012, 1693
Mph1103I ATGCAT 1 cut(s) 850
MseI TTAA 4 cut(s) 216, 1272, 1614, 1668
MslI CAYNNNNRTG 4 cut(s) 611, 1061, 1163, 1466
MspA1I CMGCKG 2 cut(s) 424, 636
MspI CCGG 1 cut(s) 1472
MspR9I CCNGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
MunI CAATTG 3 cut(s) 559, 1044, 1293
MvaI CCWGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
MwoI GCNNNNNNNGC 4 cut(s) 251, 500, 1433, 1536
NcoI CCATGG 1 cut(s) 1592
NlaIII CATG 9 cut(s) 343, 1060, 1168, 1358, 1465, 1596, 1610, 1769, 1797
NlaIV GGNNCC 6 cut(s) 310, 337, 792, 902, 1123, 1540
NmeAIII GCCGAG 1 cut(s) 1675
NsiI ATGCAT 1 cut(s) 850
PagI TCATGA 1 cut(s) 1606
PaqCI CACCTGC 1 cut(s) 389
PceI AGGCCT 1 cut(s) 1427
PciSI GCTCTTC 1 cut(s) 529
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PfeI GAWTC 2 cut(s) 17, 1753
PfoI TCCNGGA 1 cut(s) 903
PkrI GCNGC 3 cut(s) 423, 704, 737
PleI GAGTC 1 cut(s) 124
PpsI GAGTC 1 cut(s) 124
Ppu21I YACGTR 1 cut(s) 1705
PshAI GACNNNNGTC 1 cut(s) 629
PshBI ATTAAT 1 cut(s) 1272
Psp6I CCWGG 7 cut(s) 76, 324, 438, 903, 1141, 1656, 1720
PspFI CCCAGC 2 cut(s) 424, 1493
PspGI CCWGG 7 cut(s) 76, 324, 438, 903, 1141, 1656, 1720
PspN4I GGNNCC 6 cut(s) 310, 337, 792, 902, 1123, 1540
PspPI GGNCC 5 cut(s) 480, 598, 639, 1066, 1121
PsrI GAACNNNNNNTAC 2 cut(s) 1622, 1654
PsuI RGATCY 3 cut(s) 911, 1112, 1185
PvuII CAGCTG 2 cut(s) 424, 636
RsaI GTAC 5 cut(s) 167, 295, 617, 1234, 1679
RsaNI GTAC 5 cut(s) 166, 294, 616, 1233, 1678
RseI CAYNNNNRTG 4 cut(s) 611, 1061, 1163, 1466
SapI GCTCTTC 1 cut(s) 529
SaqAI TTAA 4 cut(s) 216, 1272, 1614, 1668
SatI GCNGC 3 cut(s) 422, 703, 736
Sau96I GGNCC 5 cut(s) 480, 598, 639, 1066, 1121
SchI GAGTC 1 cut(s) 125
ScrFI CCNGG 7 cut(s) 78, 326, 440, 905, 1143, 1658, 1722
SduI GDGCHC 4 cut(s) 311, 411, 541, 816
SexAI ACCWGGT 2 cut(s) 1141, 1720
SfaNI GCATC 5 cut(s) 254, 262, 747, 857, 1731
SfcI CTRYAG 1 cut(s) 775
SinI GGWCC 3 cut(s) 639, 1066, 1121
SmiMI CAYNNNNRTG 4 cut(s) 611, 1061, 1163, 1466
SmlI CTYRAG 4 cut(s) 187, 729, 1004, 1375
SmoI CTYRAG 4 cut(s) 187, 729, 1004, 1375
SseBI AGGCCT 1 cut(s) 1427
SsiI CCGC 1 cut(s) 703
SspI AATATT 1 cut(s) 220
SspMI CTAG 6 cut(s) 251, 545, 590, 927, 1217, 1598
StuI AGGCCT 1 cut(s) 1427
StyD4I CCNGG 7 cut(s) 76, 324, 438, 903, 1141, 1656, 1720
StyI CCWWGG 1 cut(s) 1592
TaaI ACNGT 4 cut(s) 163, 583, 664, 1334
TaiI ACGT 2 cut(s) 717, 1707
TaqI TCGA 3 cut(s) 123, 686, 1336
TatI WGTACW 2 cut(s) 615, 1677
TauI GCSGC 1 cut(s) 705
TfiI GAWTC 2 cut(s) 17, 1753
Tru1I TTAA 4 cut(s) 216, 1272, 1614, 1668
Tru9I TTAA 4 cut(s) 216, 1272, 1614, 1668
TscAI CASTG 2 cut(s) 168, 667
TseI GCWGC 2 cut(s) 421, 735
TspDTI ATGAA 4 cut(s) 222, 951, 1045, 1754
TspGWI ACGGA 1 cut(s) 1051
TspRI CASTG 2 cut(s) 168, 667
VpaK11BI GGWCC 3 cut(s) 639, 1066, 1121
VspI ATTAAT 1 cut(s) 1272
XapI RAATTY 2 cut(s) 1133, 1451
XspI CTAG 6 cut(s) 251, 545, 590, 927, 1217, 1598
Zsp2I ATGCAT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.