Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009768

Physical Location & Seq

Genomic Coordinates Forward (+)

16831563 .. 16834775

Gene Structure 3213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G212700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 843 bp

ATGTTTCCGAAATTTCAAAAAGCATCTGATAAGTTGCAGATGCTTTTACAAAACAGAGCCAATTTTAGTGCGTTTCGAAGCCAAACAAGCATGGCGAGGAAGAGCTCCAAAGTTCAAGCTCTCTACGAACTCTGTCAAAACATGTTCACGCCGTCGGGGTCTCCTCCCCCTTCTTCTGCAGCAATCAACAAGCTTTGTTCTGTTCTGGACACAATGTCTCCAGCTGATGTTGGTCTTAAAGAGGAAAATCTGGATGACGATCGAGGCCATGGATTTTTTGGACTTGAACAACTAAATAGAGTTGCTCGATGGACTCAACCAATAACATACTTGGATATATATGAATGTGATAGTTTTACGATGTGTATATTCTGTTTTCCTACCTCCTCAGTCATTCCACTTCATGACCATCCTGGGATGACTGTTTTTAGCAAAGTTCTCTATGGCTCTTTGCATGTGAGAGCTTATGATTGGGTCGAGCCTGCCCAGGAAAGCAAGGGACCAAATTACTTTCCAGTGAGATTGGCAAAGCTGGCAGTTGACAAGGTTTTAACAGCTCCATGTGGGACATCAGTTTTGTATCCTAGGAATGGGGGGAATCTGCATTATTTTACTGCAGTCACTCCTTGTGCTGTCCTTGACATTCTCACTCCCCCTTACAGAGAAGATGCAGGCAGAAAATGTACCTACTACCGTGATTACCCATATACTGCCTTTGCTACTGGTAACGGAATTAAGATAGAGGATGGTAAAGAAGAGGAGTATGCATGGCTTGCTGAGACAGAACCAGATAATCTCTATATGCGCCCGGGAAATTACACAGGCCCGACTATTCAAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0008152 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00430 ko01100 map00430 map01100

Pfam Domains

Protein Families

PCO_ADO

Protein Analysis

281

Amino Acids

31.43

Weight (kDa)

5.98

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18490
fragaria_vesca	FvH4_5g13010
malus_domestica	MD06G1208200.v1.1 MD14G1218600.v1.1
prunus_persica	Prupe.5G212700_v2.0.a1 Prupe.5G212700_v2.0.a1 Prupe.5G212700_v2.0.a1 Prupe.5G212700_v2.0.a1 Prupe.5G212700_v2.0.a1
pyrus_communis	pycom06g18600 pycom14g18120
rosa_chinensis	RchiOBHm_Chr7g0184171
rosa_laevigata	RLG00000004997
rosa_multiflora	Rmu_sc0012221.1_g000005
rosa_roxburghii	Rroxscaffold_3G00269830
rosa_rugosa	Rorug06G0463600
rosa_samantha	Rh7AG082300 Rh7BG064900 Rh7CG065300 Rh7DG065000
rosa_wichuraiana	Rw7G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AcsI	RAATTY	1 cut(s)	11
AfaI	GTAC	1 cut(s)	685
AfiI	CCNNNNNNNGG	1 cut(s)	590
AflIII	ACRYGT	1 cut(s)	141
AgsI	TTSAA	4 cut(s)	17, 116, 287, 836
AhdI	GACNNNNNGTC	1 cut(s)	214
AjnI	CCWGG	2 cut(s)	412, 486
AluBI	AGCT	7 cut(s)	105, 119, 193, 224, 464, 532, 557
AluI	AGCT	7 cut(s)	105, 119, 193, 224, 464, 532, 557
Alw21I	GWGCWC	1 cut(s)	107
Alw26I	GTCTC	3 cut(s)	165, 222, 773
Ama87I	CYCGRG	1 cut(s)	808
AoxI	GGCC	2 cut(s)	265, 823
ApeKI	GCWGC	1 cut(s)	179
ApoI	RAATTY	1 cut(s)	11
ArsI	GACNNNNNNTTYG	2 cut(s)	559, 591
AspA2I	CCTAGG	1 cut(s)	584
AspLEI	GCGC	1 cut(s)	807
AspS9I	GGNCC	2 cut(s)	500, 824
AsuC2I	CCSGG	2 cut(s)	809, 810
AsuII	TTCGAA	1 cut(s)	76
AvaI	CYCGRG	1 cut(s)	808
AvaII	GGWCC	1 cut(s)	500
AvrII	CCTAGG	1 cut(s)	584
BanII	GRGCYC	1 cut(s)	107
Bbv12I	GWGCWC	1 cut(s)	107
BbvI	GCAGC	1 cut(s)	191
BccI	CCATC	3 cut(s)	303, 417, 740
BceAI	ACGGC	1 cut(s)	136
BciT130I	CCWGG	2 cut(s)	414, 488
BciVI	GTATCC	1 cut(s)	591
BcnI	CCSGG	2 cut(s)	809, 810
BcoDI	GTCTC	3 cut(s)	165, 222, 773
BfaI	CTAG	1 cut(s)	585
BfmI	CTRYAG	2 cut(s)	177, 615
BfuI	GTATCC	1 cut(s)	591
BisI	GCNGC	1 cut(s)	180
BlnI	CCTAGG	1 cut(s)	584
BlsI	GCNGC	1 cut(s)	181
Bme1390I	CCNGG	4 cut(s)	414, 488, 809, 810
Bme18I	GGWCC	1 cut(s)	500
BmeRI	GACNNNNNGTC	1 cut(s)	214
BmeT110I	CYCGRG	1 cut(s)	808
BmgT120I	GGNCC	2 cut(s)	500, 824
BmiI	GGNNCC	1 cut(s)	501
BmrFI	CCNGG	4 cut(s)	414, 488, 809, 810
BmsI	GCATC	3 cut(s)	30, 32, 658
BpmI	CTGGAG	1 cut(s)	204
Bpu14I	TTCGAA	1 cut(s)	76
BpuMI	CCSGG	2 cut(s)	809, 810
BsaBI	GATNNNNATC	1 cut(s)	258
BsaI	GGTCTC	1 cut(s)	165
BsaJI	CCNNGG	5 cut(s)	268, 413, 486, 584, 808
BsaXI	ACNNNNNCTCC	2 cut(s)	202, 232
Bsc4I	CCNNNNNNNGG	1 cut(s)	590
Bse1I	ACTGG	2 cut(s)	515, 727
Bse8I	GATNNNNATC	1 cut(s)	258
BseBI	CCWGG	2 cut(s)	414, 488
BseDI	CCNNGG	5 cut(s)	268, 413, 486, 584, 808
BseGI	GGATG	4 cut(s)	259, 409, 423, 751
BseJI	GATNNNNATC	1 cut(s)	258
BseLI	CCNNNNNNNGG	1 cut(s)	590
BseMII	CTCAG	2 cut(s)	402, 768
BseNI	ACTGG	2 cut(s)	515, 727
BseRI	GAGGAG	3 cut(s)	153, 376, 773
BseXI	GCAGC	1 cut(s)	191
Bsh1285I	CGRYCG	1 cut(s)	262
BshFI	GGCC	2 cut(s)	267, 825
BsiEI	CGRYCG	1 cut(s)	262
BsiHKAI	GWGCWC	1 cut(s)	107
BsiHKCI	CYCGRG	1 cut(s)	808
BsiSI	CCGG	1 cut(s)	809
BslFI	GGGAC	2 cut(s)	513, 580
BslI	CCNNNNNNNGG	1 cut(s)	590
BsmAI	GTCTC	3 cut(s)	165, 222, 773
BsmFI	GGGAC	2 cut(s)	513, 580
BsnI	GGCC	2 cut(s)	267, 825
Bso31I	GGTCTC	1 cut(s)	165
BsoBI	CYCGRG	1 cut(s)	808
Bsp119I	TTCGAA	1 cut(s)	76
Bsp1286I	GDGCHC	1 cut(s)	107
Bsp143I	GATC	1 cut(s)	259
Bsp19I	CCATGG	1 cut(s)	268
BspANI	GGCC	2 cut(s)	267, 825
BspCNI	CTCAG	2 cut(s)	401, 769
BspHI	TCATGA	1 cut(s)	403
BspLI	GGNNCC	1 cut(s)	501
BspMAI	CTGCAG	2 cut(s)	181, 619
BspQI	GCTCTTC	1 cut(s)	95
BspT104I	TTCGAA	1 cut(s)	76
BspTNI	GGTCTC	1 cut(s)	165
BsrI	ACTGG	2 cut(s)	515, 727
BssECI	CCNNGG	5 cut(s)	268, 413, 486, 584, 808
BssMI	GATC	1 cut(s)	259
BssT1I	CCWWGG	2 cut(s)	268, 584
Bst2UI	CCWGG	2 cut(s)	414, 488
Bst4CI	ACNGT	2 cut(s)	424, 695
Bst6I	CTCTTC	2 cut(s)	95, 750
BstAPI	GCANNNNNTGC	1 cut(s)	773
BstBI	TTCGAA	1 cut(s)	76
BstC8I	GCNNGC	4 cut(s)	483, 534, 673, 774
BstDEI	CTNAG	2 cut(s)	388, 777
BstDSI	CCRYGG	1 cut(s)	268
BstF5I	GGATG	4 cut(s)	259, 409, 423, 751
BstHHI	GCGC	1 cut(s)	807
BstKTI	GATC	1 cut(s)	262
BstMAI	GTCTC	3 cut(s)	165, 222, 773
BstMBI	GATC	1 cut(s)	259
BstMCI	CGRYCG	1 cut(s)	262
BstMWI	GCNNNNNNNGC	3 cut(s)	87, 533, 773
BstNI	CCWGG	2 cut(s)	414, 488
BstNSI	RCATGY	2 cut(s)	145, 458
BstSCI	CCNGG	4 cut(s)	412, 486, 807, 808
BstSFI	CTRYAG	2 cut(s)	177, 615
BstV1I	GCAGC	1 cut(s)	191
BsuI	GTATCC	1 cut(s)	591
BsuRI	GGCC	2 cut(s)	267, 825
BtgI	CCRYGG	1 cut(s)	268
BtsCI	GGATG	4 cut(s)	259, 409, 423, 751
BtsIMutI	CAGTG	1 cut(s)	522
Cac8I	GCNNGC	4 cut(s)	483, 534, 673, 774
CciI	TCATGA	1 cut(s)	403
CfoI	GCGC	1 cut(s)	807
Cfr13I	GGNCC	2 cut(s)	500, 824
Cfr9I	CCCGGG	1 cut(s)	808
Csp6I	GTAC	1 cut(s)	684
CviAII	CATG	7 cut(s)	91, 142, 269, 404, 455, 561, 768
CviQI	GTAC	1 cut(s)	684
DdeI	CTNAG	2 cut(s)	388, 777
DpnI	GATC	1 cut(s)	261
DpnII	GATC	1 cut(s)	259
DriI	GACNNNNNGTC	1 cut(s)	214
Eam1104I	CTCTTC	2 cut(s)	95, 750
Eam1105I	GACNNNNNGTC	1 cut(s)	214
EarI	CTCTTC	2 cut(s)	95, 750
Ecl136II	GAGCTC	1 cut(s)	105
Eco130I	CCWWGG	2 cut(s)	268, 584
Eco24I	GRGCYC	1 cut(s)	107
Eco31I	GGTCTC	1 cut(s)	165
Eco47I	GGWCC	1 cut(s)	500
Eco53kI	GAGCTC	1 cut(s)	105
Eco88I	CYCGRG	1 cut(s)	808
EcoICRI	GAGCTC	1 cut(s)	105
EcoRII	CCWGG	2 cut(s)	412, 486
EcoT14I	CCWWGG	2 cut(s)	268, 584
EcoT22I	ATGCAT	1 cut(s)	769
EcoT38I	GRGCYC	1 cut(s)	107
ErhI	CCWWGG	2 cut(s)	268, 584
FaeI	CATG	7 cut(s)	94, 145, 272, 407, 458, 564, 771
FaqI	GGGAC	2 cut(s)	513, 580
FatI	CATG	7 cut(s)	90, 141, 268, 403, 454, 560, 767
Fnu4HI	GCNGC	1 cut(s)	180
FokI	GGATG	4 cut(s)	266, 396, 430, 758
FriOI	GRGCYC	1 cut(s)	107
Fsp4HI	GCNGC	1 cut(s)	180
FspBI	CTAG	1 cut(s)	585
GlaI	GCGC	1 cut(s)	806
GluI	GCNGC	1 cut(s)	180
GsuI	CTGGAG	1 cut(s)	204
HaeIII	GGCC	2 cut(s)	267, 825
HapII	CCGG	1 cut(s)	809
HhaI	GCGC	1 cut(s)	807
Hin1II	CATG	7 cut(s)	94, 145, 272, 407, 458, 564, 771
Hin6I	GCGC	1 cut(s)	805
HinP1I	GCGC	1 cut(s)	805
HincII	GTYRAC	1 cut(s)	541
HindII	GTYRAC	1 cut(s)	541
HindIII	AAGCTT	1 cut(s)	191
HinfI	GANTC	2 cut(s)	313, 598
HpaII	CCGG	1 cut(s)	809
Hpy166II	GTNNAC	2 cut(s)	147, 541
Hpy188I	TCNGA	2 cut(s)	9, 28
Hpy188III	TCNNGA	3 cut(s)	206, 251, 404
Hpy8I	GTNNAC	2 cut(s)	147, 541
Hpy99I	CGWCG	1 cut(s)	157
HpyAV	CCTTC	1 cut(s)	180
HpyCH4III	ACNGT	2 cut(s)	424, 695
HpyCH4V	TGCA	7 cut(s)	37, 179, 454, 604, 617, 671, 767
HpyF10VI	GCNNNNNNNGC	3 cut(s)	87, 533, 773
HpyF3I	CTNAG	2 cut(s)	388, 777
Hsp92II	CATG	7 cut(s)	94, 145, 272, 407, 458, 564, 771
HspAI	GCGC	1 cut(s)	805
Kzo9I	GATC	1 cut(s)	259
LguI	GCTCTTC	1 cut(s)	95
LmnI	GCTCC	2 cut(s)	110, 562
Lsp1109I	GCAGC	1 cut(s)	191
LweI	GCATC	3 cut(s)	30, 32, 658
MaeI	CTAG	1 cut(s)	585
MaeIII	GTNAC	2 cut(s)	619, 725
MalI	GATC	1 cut(s)	261
MboI	GATC	1 cut(s)	259
MboII	GAAGA	4 cut(s)	112, 165, 677, 767
MhlI	GDGCHC	1 cut(s)	107
MluCI	AATT	5 cut(s)	11, 61, 505, 732, 814
MlyI	GAGTC	1 cut(s)	307
MnlI	CCTC	8 cut(s)	90, 174, 235, 257, 394, 397, 736, 751
Mph1103I	ATGCAT	1 cut(s)	769
MseI	TTAA	4 cut(s)	237, 551, 735, 841
MspA1I	CMGCKG	1 cut(s)	224
MspI	CCGG	1 cut(s)	809
MspR9I	CCNGG	4 cut(s)	414, 488, 809, 810
MvaI	CCWGG	2 cut(s)	414, 488
MwoI	GCNNNNNNNGC	3 cut(s)	87, 533, 773
NciI	CCSGG	2 cut(s)	809, 810
NcoI	CCATGG	1 cut(s)	268
NdeII	GATC	1 cut(s)	259
NlaIII	CATG	7 cut(s)	94, 145, 272, 407, 458, 564, 771
NlaIV	GGNNCC	1 cut(s)	501
NmuCI	GTSAC	1 cut(s)	619
NsiI	ATGCAT	1 cut(s)	769
NspI	RCATGY	2 cut(s)	145, 458
NspV	TTCGAA	1 cut(s)	76
PagI	TCATGA	1 cut(s)	403
PciI	ACATGT	1 cut(s)	141
PciSI	GCTCTTC	1 cut(s)	95
PfeI	GAWTC	1 cut(s)	598
PkrI	GCNGC	1 cut(s)	181
Ple19I	CGATCG	1 cut(s)	262
PleI	GAGTC	1 cut(s)	307
PpsI	GAGTC	1 cut(s)	307
PscI	ACATGT	1 cut(s)	141
Psp124BI	GAGCTC	1 cut(s)	107
Psp6I	CCWGG	2 cut(s)	412, 486
PspGI	CCWGG	2 cut(s)	412, 486
PspN4I	GGNNCC	1 cut(s)	501
PspPI	GGNCC	2 cut(s)	500, 824
PstI	CTGCAG	2 cut(s)	181, 619
PvuI	CGATCG	1 cut(s)	262
PvuII	CAGCTG	1 cut(s)	224
RsaI	GTAC	1 cut(s)	685
RsaNI	GTAC	1 cut(s)	684
SacI	GAGCTC	1 cut(s)	107
SapI	GCTCTTC	1 cut(s)	95
SaqAI	TTAA	4 cut(s)	237, 551, 735, 841
SatI	GCNGC	1 cut(s)	180
Sau3AI	GATC	1 cut(s)	259
Sau96I	GGNCC	2 cut(s)	500, 824
SchI	GAGTC	1 cut(s)	307
ScrFI	CCNGG	4 cut(s)	414, 488, 809, 810
SduI	GDGCHC	1 cut(s)	107
SfaNI	GCATC	3 cut(s)	30, 32, 658
SfcI	CTRYAG	2 cut(s)	177, 615
SfuI	TTCGAA	1 cut(s)	76
SinI	GGWCC	1 cut(s)	500
SmaI	CCCGGG	1 cut(s)	810
Sse9I	AATT	5 cut(s)	11, 61, 505, 732, 814
SspMI	CTAG	1 cut(s)	585
SstI	GAGCTC	1 cut(s)	107
StyD4I	CCNGG	4 cut(s)	412, 486, 807, 808
StyI	CCWWGG	2 cut(s)	268, 584
TaaI	ACNGT	2 cut(s)	424, 695
TaqI	TCGA	4 cut(s)	76, 262, 307, 477
TasI	AATT	5 cut(s)	11, 61, 505, 732, 814
TfiI	GAWTC	1 cut(s)	598
Tru1I	TTAA	4 cut(s)	237, 551, 735, 841
Tru9I	TTAA	4 cut(s)	237, 551, 735, 841
TscAI	CASTG	1 cut(s)	522
TseFI	GTSAC	1 cut(s)	619
TseI	GCWGC	1 cut(s)	179
Tsp45I	GTSAC	1 cut(s)	619
TspDTI	ATGAA	2 cut(s)	357, 392
TspGWI	ACGGA	1 cut(s)	744
TspMI	CCCGGG	1 cut(s)	808
TspRI	CASTG	1 cut(s)	522
VpaK11BI	GGWCC	1 cut(s)	500
XapI	RAATTY	1 cut(s)	11
XceI	RCATGY	2 cut(s)	145, 458
XcmI	CCANNNNNNNNNTGG	1 cut(s)	275
XmaI	CCCGGG	1 cut(s)	808
XmaJI	CCTAGG	1 cut(s)	584
XspI	CTAG	1 cut(s)	585
Zsp2I	ATGCAT	1 cut(s)	769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.