Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011260

Physical Location & Seq

Genomic Coordinates Forward (+)

18171422 .. 18175020

Gene Structure 3599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G241400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGTTATGGTTGGCCACCGCAAGACGACTCACTCGACGCCAATTTGTTGACCAATTTACAACCCAACCACTTGCCTTAGTGATACTAGTAACAACAACACACTGCTTTTCCACAAATACCCTCACTTCTCTCGACTCTTATTATGCAAACCTTGTTCAAGCCTGCATTCGATCTAAATCTCTCCCTCAAGCCAAGAAAATCCATCAACATCTCTTGAAAAACACTACCCGCCTCAAGGACACCTCCTTTTTACTTGAAAAAGTAGCCCATTTGTATATAACCTGCAATCAAGTTGACCTCGCATCCCGCGTGTTCGATGAAATTCCCCAACCAAGTGTTATTCTTTGGAACCTTCTCATAAGAGCATACGCATGGAATGGACCCTTTGAACGAGCCATCCACTTGTACTATGACTTGCTCCAATCGGGTGTTAAGCCCACTAAGTACACTTACCCGTTTGTTCTCAAGGCCTGCTCGGGTTTACAAGCACTGGAAGCTGGTAGAGAGATACATCAGCATGCCAAAGCACTTGGGCTTGCCTCTGATGTCTATGTTTGCACTGCTTTGATTGACCTCTATGCCAAGTGCGGGGGCTTGGCAGAGGCACAGACCGTCTTCCGTGGTATGCTGTATAAAGATGTCGTGGCATGGAATGCTATGATTGCCGGGTTTTCGCTTCACGGTCTTTATGATGACACTATACAAATGCTTGTTCAAATGCAAAAAGCGGGAACAAGTCCAAACGCTTCCACCATTGTTGCAGTTCTTCCAACAGTAGCACAAGCTAATGCATTGAGCCAAGGGAAGGCAATGCACGGTTTCTCCCTGAGAAGGAGCCTTAGTGGGGAAGTGGTGCTTGGAACTGGGCTTTTGGATATGTATTCTAAATGTCAGTGCATAGCTTATGCGAGGAGAATATTTGATGCAATTGATGTCAAGAACGAGGTTTGTTGGAGCGCAATGATAGGTGCGTACGTGATCTGTGACTCTATGAGAGAGGCGATGGCGTTATTTGATGAAATGGTGCTAAGAAAGGAAATAAATCCAACACCGGTAACTCTTGGGAGTATACTCCGAGCTTGCACAAAGCTAACTGATCTGAGTAGAGGGAGACGGGTACATTGTTATGCAATTAAATCTGGGTTTGATTTAAATACAATGGTGGGAAACACAATCCTGTCTATGTATGCAAAGTGTGGGATCATAGACGACGCAGTCAGATTCTTTGATAAAATGAATTCAAAAGATACAGTTTCTTATAGTGCTATCATCTCAGGCTGCGTGCAGAACGGTTATGCAAAGGAAGCTTTACTTATATTTCATCATATGCAATTGTCCGGGTTTGATCCAGATTTGGCAACCATGGTGGGTGTTTTGCCAGCTTGTTCACATTTGGCTGCTCTTCAACATGGGGCCTGTGGTCACGCTTATTCAATTGTTCATGGCTTTGGTACTGACACCTCAATTTGTAATGTCTTAATAGACATGTACTCAAAGTGTGGGAAGATTAATAGAGGTAGACAAGTTTTTGACAGAATGGTTACGCGGGATATTATCTCATGGAACGCAATGATAGTTGGTTATGGGATTCATGGCCTTGGGATGGCAGCTATTTCACAGTTCCATCATATGCTGGCAGCTGGCATTAAGCCAGACGACGTGACTTTCATTGGTCTCTTATCTGCTTGCAGCCATTCGGGGCTTGTCACCGAAGGCAAACACTGGTTTAATGCTATGAGTGAGGATTTCAACATAACCCCGAGGATGGAACATTACATATGCATGGTGGATCTTCTCGGCCGGGCTGGATTTTTGGCGGAGGCGCACGTTTTCATCCAAAAAATGCCATTTGAGGCTGATGTTCGTGTGTGGAGTGCGTTGCTTGCTGCATGTAGGGTCCACAATAATATTGAACTTGGGGAAGAAGTATCCAAGAAAATTCAGGGGAAAGGACTCGAAGGTACTGGAAATTTGGTCCTTTTATCTAACATATACAGCGCTGTTGGGAGATGGGATGATGCAGCCTATGTCAGAATCAAGCAGAAGGGCCAAGGCCTTAAGAAGAGTCCAGGATGCAGTTGGGTTGAGATAAACGGGATTATTCATGGATTTGTTGGTGGAGATCAGTCCCATCCTCAATCAGCTCAGATACATGAAAAACTAGAGGAACTACTAGTAGATATGAAAAGGCTGGGATATTGTGCAGAAAATAGTTTTGTTCTTCAAGATGTTGAGGAAGAGGAGAAAGAAAGAATCCTCCTTTATCATAGTGAGAAGCTAGCCATTGCTTACGCAATTCTTAGTCTGAGGCCAGGCAAACCCATCTTAGTTACCAAGAATTTGCGGGTTTGTGGTGATTGCCATGCTGCCATAAAGGTCATCACTCTTATTACAAAGAGAGAAATAATTGTAAGAGATTTGACTCGGTTTCATCATTTCAAAGATGGAATTTGCAATTGTGCTGACTTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

825

Amino Acids

91.42

Weight (kDa)

8.4

Isoelectric Point (pI)

39.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16610
fragaria_vesca	FvH4_5g18140 FvH4_5g18140
malus_domestica	MD14G1243800.v1.1
prunus_persica	Prupe.5G241400_v2.0.a1 Prupe.5G241400_v2.0.a1
pyrus_communis	pycom14g20490
rosa_chinensis	RchiOBHm_Chr7g0177471
rosa_laevigata	RLG00000005535
rosa_multiflora	Rmu_co8313469.1_g000001 Rmu_sc0036713.1_g000001 Rmu_sc0036714.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275850
rosa_rugosa	Rorug06G0406200 Rorug06G0406300
rosa_samantha	Rh7AG005800 Rh7BG005700 Rh7CG006100 Rh7DG005600
rosa_wichuraiana	Rw7G000470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1214
Acc36I	ACCTGC	1 cut(s)	290
AccI	GTMKAC	2 cut(s)	1069, 1519
AccII	CGCG	2 cut(s)	309, 1546
AciI	CCGC	8 cut(s)	18, 229, 307, 588, 728, 1546, 1817, 2344
AclWI	GGATC	3 cut(s)	1208, 1340, 1797
AcoI	YGGCCR	2 cut(s)	12, 1798
AcsI	RAATTY	6 cut(s)	321, 1237, 1938, 1969, 2338, 2448
AcyI	GRCGYC	1 cut(s)	37
AfaI	GTAC	7 cut(s)	407, 446, 974, 1119, 1453, 1490, 1963
AfeI	AGCGCT	1 cut(s)	1999
AfiI	CCNNNNNNNGG	7 cut(s)	235, 588, 805, 831, 844, 1603, 1765
AflII	CTTAAG	1 cut(s)	2057
AflIII	ACRYGT	1 cut(s)	1485
AgeI	ACCGGT	1 cut(s)	1051
AhlI	ACTAGT	2 cut(s)	85, 2173
AjiI	CACGTC	1 cut(s)	1660
AjnI	CCWGG	2 cut(s)	2068, 2311
AjuI	GAANNNNNNNTTGG	2 cut(s)	840, 872
AloI	GAACNNNNNNTCC	2 cut(s)	381, 413
Alw26I	GTCTC	2 cut(s)	1105, 1679
AlwI	GGATC	3 cut(s)	1208, 1340, 1797
Ama87I	CYCGRG	2 cut(s)	475, 1759
Aor51HI	AGCGCT	1 cut(s)	1999
AoxI	GGCC	8 cut(s)	12, 468, 1413, 1594, 1798, 2047, 2053, 2309
ApeKI	GCWGC	8 cut(s)	1278, 1397, 1607, 1637, 1689, 1886, 2021, 2366
ApoI	RAATTY	6 cut(s)	321, 1237, 1938, 1969, 2338, 2448
AseI	ATTAAT	1 cut(s)	1509
AsiGI	ACCGGT	1 cut(s)	1051
AspLEI	GCGC	3 cut(s)	959, 1825, 2000
AspS9I	GGNCC	5 cut(s)	380, 1413, 1897, 1975, 2047
AsuC2I	CCSGG	3 cut(s)	667, 1339, 1802
AsuHPI	GGTGA	2 cut(s)	1699, 2366
AsuNHI	GCTAGC	1 cut(s)	2278
AvaI	CYCGRG	2 cut(s)	475, 1759
AvaII	GGWCC	3 cut(s)	380, 1897, 1975
BalI	TGGCCA	1 cut(s)	14
BbsI	GAAGAC	1 cut(s)	607
BbvI	GCAGC	8 cut(s)	1265, 1384, 1619, 1649, 1701, 1873, 2033, 2353
BciT130I	CCWGG	2 cut(s)	2070, 2313
BciVI	GTATCC	1 cut(s)	1939
BcnI	CCSGG	3 cut(s)	667, 1339, 1802
BcoDI	GTCTC	2 cut(s)	1105, 1679
BcuI	ACTAGT	2 cut(s)	85, 2173
BfaI	CTAG	4 cut(s)	86, 2162, 2174, 2279
BfoI	RGCGCY	1 cut(s)	2001
BfrI	CTTAAG	1 cut(s)	2057
BfuAI	ACCTGC	1 cut(s)	290
BfuI	GTATCC	1 cut(s)	1939
BisI	GCNGC	8 cut(s)	1279, 1398, 1608, 1638, 1690, 1887, 2022, 2367
BlsI	GCNGC	8 cut(s)	1280, 1399, 1609, 1639, 1691, 1888, 2023, 2368
Bme1390I	CCNGG	5 cut(s)	667, 1339, 1802, 2070, 2313
Bme18I	GGWCC	3 cut(s)	380, 1897, 1975
BmeT110I	CYCGRG	2 cut(s)	475, 1759
BmgBI	CACGTC	1 cut(s)	1660
BmgT120I	GGNCC	5 cut(s)	380, 1413, 1897, 1975, 2047
BmiI	GGNNCC	5 cut(s)	350, 382, 836, 1414, 1898
BmrFI	CCNGG	5 cut(s)	667, 1339, 1802, 2070, 2313
BmrI	ACTGGG	1 cut(s)	873
BmsI	GCATC	4 cut(s)	311, 913, 2008, 2063
BmtI	GCTAGC	1 cut(s)	2282
BmuI	ACTGGG	1 cut(s)	873
BpiI	GAAGAC	1 cut(s)	607
BpuEI	CTTGAG	3 cut(s)	171, 218, 449
BpuMI	CCSGG	3 cut(s)	667, 1339, 1802
BsaAI	YACGTR	1 cut(s)	976
BsaBI	GATNNNNATC	1 cut(s)	175
BsaHI	GRCGYC	1 cut(s)	37
BsaI	GGTCTC	1 cut(s)	1679
BsaJI	CCNNGG	6 cut(s)	619, 799, 1362, 1597, 1760, 2050
BsaWI	WCCGGW	1 cut(s)	1051
BsaXI	ACNNNNNCTCC	4 cut(s)	806, 826, 836, 856
Bsc4I	CCNNNNNNNGG	7 cut(s)	235, 588, 805, 831, 844, 1603, 1765
Bse118I	RCCGGY	1 cut(s)	1051
Bse1I	ACTGG	4 cut(s)	495, 868, 1727, 1969
Bse3DI	GCAATG	4 cut(s)	816, 966, 1575, 2283
Bse8I	GATNNNNATC	1 cut(s)	175
BseBI	CCWGG	2 cut(s)	2070, 2313
BseDI	CCNNGG	6 cut(s)	619, 799, 1362, 1597, 1760, 2050
BseGI	GGATG	8 cut(s)	302, 396, 1608, 1770, 1833, 2020, 2078, 2131
BseJI	GATNNNNATC	1 cut(s)	175
BseLI	CCNNNNNNNGG	7 cut(s)	235, 588, 805, 831, 844, 1603, 1765
BseMI	GCAATG	4 cut(s)	816, 966, 1575, 2283
BseMII	CTCAG	5 cut(s)	818, 1091, 1287, 2159, 2297
BseNI	ACTGG	4 cut(s)	495, 868, 1727, 1969
BseRI	GAGGAG	2 cut(s)	925, 2255
BseX3I	CGGCCG	1 cut(s)	1798
BseXI	GCAGC	8 cut(s)	1265, 1384, 1619, 1649, 1701, 1873, 2033, 2353
BseYI	CCCAGC	1 cut(s)	2191
BsgI	GTGCAG	2 cut(s)	1304, 2223
Bsh1236I	CGCG	2 cut(s)	309, 1546
Bsh1285I	CGRYCG	1 cut(s)	1801
BshFI	GGCC	8 cut(s)	14, 470, 1415, 1596, 1800, 2049, 2055, 2311
BshTI	ACCGGT	1 cut(s)	1051
BsiEI	CGRYCG	1 cut(s)	1801
BsiHKCI	CYCGRG	2 cut(s)	475, 1759
BsiSI	CCGG	4 cut(s)	666, 1052, 1338, 1801
BsiWI	CGTACG	1 cut(s)	972
BslFI	GGGAC	1 cut(s)	2113
BslI	CCNNNNNNNGG	7 cut(s)	235, 588, 805, 831, 844, 1603, 1765
BsmAI	GTCTC	2 cut(s)	1105, 1679
BsmBI	CGTCTC	1 cut(s)	1105
BsmFI	GGGAC	1 cut(s)	2113
BsmI	GAATGC	2 cut(s)	165, 658
BsnI	GGCC	8 cut(s)	14, 470, 1415, 1596, 1800, 2049, 2055, 2311
Bso31I	GGTCTC	1 cut(s)	1679
BsoBI	CYCGRG	2 cut(s)	475, 1759
Bsp143I	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
Bsp19I	CCATGG	1 cut(s)	1362
BspACI	CCGC	8 cut(s)	18, 229, 307, 588, 728, 1546, 1817, 2344
BspANI	GGCC	8 cut(s)	14, 470, 1415, 1596, 1800, 2049, 2055, 2311
BspCNI	CTCAG	5 cut(s)	819, 1092, 1286, 2158, 2298
BspFNI	CGCG	2 cut(s)	309, 1546
BspLI	GGNNCC	5 cut(s)	350, 382, 836, 1414, 1898
BspMI	ACCTGC	1 cut(s)	290
BspOI	GCTAGC	1 cut(s)	2282
BspPI	GGATC	3 cut(s)	1208, 1340, 1797
BspQI	GCTCTTC	1 cut(s)	1407
BspTI	CTTAAG	1 cut(s)	2057
BspTNI	GGTCTC	1 cut(s)	1679
BsrDI	GCAATG	4 cut(s)	816, 966, 1575, 2283
BsrFI	RCCGGY	1 cut(s)	1051
BsrI	ACTGG	4 cut(s)	495, 868, 1727, 1969
BssAI	RCCGGY	1 cut(s)	1051
BssECI	CCNNGG	6 cut(s)	619, 799, 1362, 1597, 1760, 2050
BssMI	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
BssNAI	GTATAC	1 cut(s)	1070
BssNI	GRCGYC	1 cut(s)	37
BssT1I	CCWWGG	4 cut(s)	799, 1362, 1597, 2050
Bst1107I	GTATAC	1 cut(s)	1070
Bst2UI	CCWGG	2 cut(s)	2070, 2313
Bst4CI	ACNGT	7 cut(s)	613, 683, 775, 818, 1252, 1292, 1620
Bst6I	CTCTTC	3 cut(s)	1407, 2057, 2232
BstACI	GRCGYC	1 cut(s)	37
BstAFI	CTTAAG	1 cut(s)	2057
BstAPI	GCANNNNNTGC	1 cut(s)	653
BstBAI	YACGTR	1 cut(s)	976
BstDSI	CCRYGG	2 cut(s)	619, 1362
BstF5I	GGATG	8 cut(s)	302, 396, 1608, 1770, 1833, 2020, 2078, 2131
BstFNI	CGCG	2 cut(s)	309, 1546
BstH2I	RGCGCY	1 cut(s)	2001
BstHHI	GCGC	3 cut(s)	959, 1825, 2000
BstKTI	GATC	7 cut(s)	173, 981, 1099, 1203, 1348, 1792, 2125
BstMAI	GTCTC	2 cut(s)	1105, 1679
BstMBI	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
BstMCI	CGRYCG	1 cut(s)	1801
BstMWI	GCNNNNNNNGC	5 cut(s)	494, 653, 662, 1304, 1883
BstNI	CCWGG	2 cut(s)	2070, 2313
BstNSI	RCATGY	3 cut(s)	521, 1489, 1893
BstSCI	CCNGG	5 cut(s)	665, 1337, 1800, 2068, 2311
BstUI	CGCG	2 cut(s)	309, 1546
BstV1I	GCAGC	8 cut(s)	1265, 1384, 1619, 1649, 1701, 1873, 2033, 2353
BstV2I	GAAGAC	1 cut(s)	607
BstX2I	RGATCY	1 cut(s)	1789
BstYI	RGATCY	1 cut(s)	1789
BstZ17I	GTATAC	1 cut(s)	1070
BstZI	CGGCCG	1 cut(s)	1798
BsuI	GTATCC	1 cut(s)	1939
BsuRI	GGCC	8 cut(s)	14, 470, 1415, 1596, 1800, 2049, 2055, 2311
BtgI	CCRYGG	2 cut(s)	619, 1362
BtgZI	GCGATG	1 cut(s)	1016
BtrI	CACGTC	1 cut(s)	1660
BtsCI	GGATG	8 cut(s)	302, 396, 1608, 1770, 1833, 2020, 2078, 2131
BtsI	GCAGTG	2 cut(s)	100, 558
BtsIMutI	CAGTG	5 cut(s)	100, 488, 558, 899, 1720
BveI	ACCTGC	1 cut(s)	290
CfoI	GCGC	3 cut(s)	959, 1825, 2000
Cfr10I	RCCGGY	1 cut(s)	1051
Cfr13I	GGNCC	5 cut(s)	380, 1413, 1897, 1975, 2047
CseI	GACGC	2 cut(s)	45, 1220
Csp6I	GTAC	7 cut(s)	406, 445, 973, 1118, 1452, 1489, 1962
CspAI	ACCGGT	1 cut(s)	1051
CspCI	CAANNNNNGTGG	4 cut(s)	739, 774, 1347, 1382
CviQI	GTAC	7 cut(s)	406, 445, 973, 1118, 1452, 1489, 1962
DpnI	GATC	7 cut(s)	172, 980, 1098, 1202, 1347, 1791, 2124
DpnII	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
DraI	TTTAAA	1 cut(s)	1152
DrdI	GACNNNNNNGTC	1 cut(s)	1214
DseDI	GACNNNNNNGTC	1 cut(s)	1214
EaeI	YGGCCR	2 cut(s)	12, 1798
EagI	CGGCCG	1 cut(s)	1798
Eam1104I	CTCTTC	3 cut(s)	1407, 2057, 2232
EarI	CTCTTC	3 cut(s)	1407, 2057, 2232
EciI	GGCGGA	1 cut(s)	1832
EclXI	CGGCCG	1 cut(s)	1798
Eco130I	CCWWGG	4 cut(s)	799, 1362, 1597, 2050
Eco147I	AGGCCT	2 cut(s)	470, 2055
Eco31I	GGTCTC	1 cut(s)	1679
Eco47I	GGWCC	3 cut(s)	380, 1897, 1975
Eco47III	AGCGCT	1 cut(s)	1999
Eco52I	CGGCCG	1 cut(s)	1798
Eco88I	CYCGRG	2 cut(s)	475, 1759
EcoO109I	RGGNCCY	1 cut(s)	1413
EcoRI	GAATTC	1 cut(s)	1237
EcoRII	CCWGG	2 cut(s)	2068, 2311
EcoT14I	CCWWGG	4 cut(s)	799, 1362, 1597, 2050
EcoT22I	ATGCAT	2 cut(s)	793, 1784
ErhI	CCWWGG	4 cut(s)	799, 1362, 1597, 2050
Esp3I	CGTCTC	1 cut(s)	1105
FalI	AAGNNNNNCTT	4 cut(s)	840, 872, 1296, 1328
FaqI	GGGAC	1 cut(s)	2113
FauI	CCCGC	6 cut(s)	236, 314, 581, 721, 1539, 2337
FauNDI	CATATG	3 cut(s)	1326, 1629, 1778
FblI	GTMKAC	2 cut(s)	1069, 1519
Fnu4HI	GCNGC	8 cut(s)	1279, 1398, 1608, 1638, 1690, 1887, 2022, 2367
FokI	GGATG	8 cut(s)	289, 383, 1615, 1777, 1820, 2027, 2085, 2118
Fsp4HI	GCNGC	8 cut(s)	1279, 1398, 1608, 1638, 1690, 1887, 2022, 2367
FspBI	CTAG	4 cut(s)	86, 2162, 2174, 2279
GlaI	GCGC	3 cut(s)	958, 1824, 1999
GluI	GCNGC	8 cut(s)	1279, 1398, 1608, 1638, 1690, 1887, 2022, 2367
GsaI	CCCAGC	1 cut(s)	2195
HaeII	RGCGCY	1 cut(s)	2001
HaeIII	GGCC	8 cut(s)	14, 470, 1415, 1596, 1800, 2049, 2055, 2311
HapII	CCGG	4 cut(s)	666, 1052, 1338, 1801
HgaI	GACGC	2 cut(s)	45, 1220
HhaI	GCGC	3 cut(s)	959, 1825, 2000
Hin1I	GRCGYC	1 cut(s)	37
Hin6I	GCGC	3 cut(s)	957, 1823, 1998
HinP1I	GCGC	3 cut(s)	957, 1823, 1998
HincII	GTYRAC	2 cut(s)	49, 295
HindII	GTYRAC	2 cut(s)	49, 295
HindIII	AAGCTT	1 cut(s)	1305
HpaII	CCGG	4 cut(s)	666, 1052, 1338, 1801
HphI	GGTGA	2 cut(s)	1699, 2366
Hpy166II	GTNNAC	8 cut(s)	49, 295, 447, 482, 1070, 1388, 1520, 1900
Hpy188I	TCNGA	7 cut(s)	544, 1076, 1101, 1220, 2033, 2148, 2307
Hpy188III	TCNNGA	5 cut(s)	131, 214, 937, 1349, 2225
Hpy8I	GTNNAC	8 cut(s)	49, 295, 447, 482, 1070, 1388, 1520, 1900
Hpy99I	CGWCG	3 cut(s)	39, 1214, 1661
HpyAV	CCTTC	6 cut(s)	362, 799, 825, 1706, 1952, 2038
HpyCH4III	ACNGT	7 cut(s)	613, 683, 775, 818, 1252, 1292, 1620
HpyCH4IV	ACGT	3 cut(s)	975, 1659, 1827
HpyF10VI	GCNNNNNNNGC	5 cut(s)	494, 653, 662, 1304, 1883
HpySE526I	ACGT	3 cut(s)	975, 1659, 1827
Hsp92I	GRCGYC	1 cut(s)	37
HspAI	GCGC	3 cut(s)	957, 1823, 1998
Kzo9I	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
LguI	GCTCTTC	1 cut(s)	1407
LmnI	GCTCC	3 cut(s)	423, 834, 954
Lsp1109I	GCAGC	8 cut(s)	1265, 1384, 1619, 1649, 1701, 1873, 2033, 2353
LweI	GCATC	4 cut(s)	311, 913, 2008, 2063
MaeI	CTAG	4 cut(s)	86, 2162, 2174, 2279
MaeII	ACGT	3 cut(s)	975, 1659, 1827
MaeIII	GTNAC	8 cut(s)	88, 983, 1054, 1421, 1540, 1660, 1705, 2329
MalI	GATC	7 cut(s)	172, 980, 1098, 1202, 1347, 1791, 2124
MboI	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
MboII	GAAGA	9 cut(s)	607, 758, 1394, 1516, 1784, 1934, 2074, 2213, 2249
MfeI	CAATTG	4 cut(s)	927, 1331, 1434, 2455
MflI	RGATCY	1 cut(s)	1789
MlsI	TGGCCA	1 cut(s)	14
MluNI	TGGCCA	1 cut(s)	14
MlyI	GAGTC	6 cut(s)	21, 128, 980, 1947, 2074, 2416
MmeI	TCCRAC	3 cut(s)	794, 932, 1070
Mox20I	TGGCCA	1 cut(s)	14
Mph1103I	ATGCAT	2 cut(s)	793, 1784
MscI	TGGCCA	1 cut(s)	14
MseI	TTAA	8 cut(s)	432, 1134, 1151, 1478, 1509, 1647, 1728, 2058
MslI	CAYNNNNRTG	4 cut(s)	370, 516, 1125, 1781
Msp20I	TGGCCA	1 cut(s)	14
MspA1I	CMGCKG	1 cut(s)	1640
MspCI	CTTAAG	1 cut(s)	2057
MspI	CCGG	4 cut(s)	666, 1052, 1338, 1801
MspR9I	CCNGG	5 cut(s)	667, 1339, 1802, 2070, 2313
MunI	CAATTG	4 cut(s)	927, 1331, 1434, 2455
Mva1269I	GAATGC	2 cut(s)	165, 658
MvaI	CCWGG	2 cut(s)	2070, 2313
MvnI	CGCG	2 cut(s)	309, 1546
MwoI	GCNNNNNNNGC	5 cut(s)	494, 653, 662, 1304, 1883
NciI	CCSGG	3 cut(s)	667, 1339, 1802
NcoI	CCATGG	1 cut(s)	1362
NdeI	CATATG	3 cut(s)	1326, 1629, 1778
NdeII	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
NheI	GCTAGC	1 cut(s)	2278
NlaIV	GGNNCC	5 cut(s)	350, 382, 836, 1414, 1898
NmeAIII	GCCGAG	1 cut(s)	1776
NmuCI	GTSAC	4 cut(s)	983, 1421, 1660, 1705
NsiI	ATGCAT	2 cut(s)	793, 1784
NspI	RCATGY	3 cut(s)	521, 1489, 1893
PaeI	GCATGC	1 cut(s)	521
PceI	AGGCCT	2 cut(s)	470, 2055
PciI	ACATGT	1 cut(s)	1485
PciSI	GCTCTTC	1 cut(s)	1407
PcsI	WCGNNNNNNNCGW	2 cut(s)	31, 306
PctI	GAATGC	2 cut(s)	165, 658
PfeI	GAWTC	4 cut(s)	1221, 1588, 2034, 2253
Pfl23II	CGTACG	1 cut(s)	972
PflFI	GACNNNGTC	1 cut(s)	1214
PfoI	TCCNGGA	1 cut(s)	2068
PinAI	ACCGGT	1 cut(s)	1051
PkrI	GCNGC	8 cut(s)	1280, 1399, 1609, 1639, 1691, 1888, 2023, 2368
PleI	GAGTC	6 cut(s)	21, 128, 980, 1947, 2073, 2416
PpsI	GAGTC	6 cut(s)	21, 128, 980, 1947, 2073, 2416
Ppu21I	YACGTR	1 cut(s)	976
PscI	ACATGT	1 cut(s)	1485
PshBI	ATTAAT	1 cut(s)	1509
Psp6I	CCWGG	2 cut(s)	2068, 2311
PspFI	CCCAGC	1 cut(s)	2191
PspGI	CCWGG	2 cut(s)	2068, 2311
PspLI	CGTACG	1 cut(s)	972
PspN4I	GGNNCC	5 cut(s)	350, 382, 836, 1414, 1898
PspPI	GGNCC	5 cut(s)	380, 1413, 1897, 1975, 2047
PsuI	RGATCY	1 cut(s)	1789
PsyI	GACNNNGTC	1 cut(s)	1214
PvuII	CAGCTG	1 cut(s)	1640
RsaI	GTAC	7 cut(s)	407, 446, 974, 1119, 1453, 1490, 1963
RsaNI	GTAC	7 cut(s)	406, 445, 973, 1118, 1452, 1489, 1962
RseI	CAYNNNNRTG	4 cut(s)	370, 516, 1125, 1781
SapI	GCTCTTC	1 cut(s)	1407
SaqAI	TTAA	8 cut(s)	432, 1134, 1151, 1478, 1509, 1647, 1728, 2058
SatI	GCNGC	8 cut(s)	1279, 1398, 1608, 1638, 1690, 1887, 2022, 2367
Sau3AI	GATC	7 cut(s)	170, 978, 1096, 1200, 1345, 1789, 2122
Sau96I	GGNCC	5 cut(s)	380, 1413, 1897, 1975, 2047
SchI	GAGTC	6 cut(s)	21, 128, 980, 1947, 2074, 2416
ScrFI	CCNGG	5 cut(s)	667, 1339, 1802, 2070, 2313
SfaNI	GCATC	4 cut(s)	311, 913, 2008, 2063
SinI	GGWCC	3 cut(s)	380, 1897, 1975
SmiI	ATTTAAAT	1 cut(s)	1152
SmiMI	CAYNNNNRTG	4 cut(s)	370, 516, 1125, 1781
SmlI	CTYRAG	4 cut(s)	186, 233, 464, 2057
SmoI	CTYRAG	4 cut(s)	186, 233, 464, 2057
SpeI	ACTAGT	2 cut(s)	85, 2173
SphI	GCATGC	1 cut(s)	521
SseBI	AGGCCT	2 cut(s)	470, 2055
SsiI	CCGC	8 cut(s)	18, 229, 307, 588, 728, 1546, 1817, 2344
SspI	AATATT	2 cut(s)	918, 1909
SspMI	CTAG	4 cut(s)	86, 2162, 2174, 2279
StuI	AGGCCT	2 cut(s)	470, 2055
StyD4I	CCNGG	5 cut(s)	665, 1337, 1800, 2068, 2311
StyI	CCWWGG	4 cut(s)	799, 1362, 1597, 2050
SwaI	ATTTAAAT	1 cut(s)	1152
TaaI	ACNGT	7 cut(s)	613, 683, 775, 818, 1252, 1292, 1620
TaiI	ACGT	3 cut(s)	978, 1662, 1830
TaqI	TCGA	5 cut(s)	34, 132, 169, 315, 1956
TatI	WGTACW	3 cut(s)	405, 444, 1488
TfiI	GAWTC	4 cut(s)	1221, 1588, 2034, 2253
Tru1I	TTAA	8 cut(s)	432, 1134, 1151, 1478, 1509, 1647, 1728, 2058
Tru9I	TTAA	8 cut(s)	432, 1134, 1151, 1478, 1509, 1647, 1728, 2058
TscAI	CASTG	5 cut(s)	107, 495, 565, 899, 1727
TseFI	GTSAC	4 cut(s)	983, 1421, 1660, 1705
TseI	GCWGC	8 cut(s)	1278, 1397, 1607, 1637, 1689, 1886, 2021, 2366
Tsp45I	GTSAC	4 cut(s)	983, 1421, 1660, 1705
TspGWI	ACGGA	1 cut(s)	608
TspRI	CASTG	5 cut(s)	107, 495, 565, 899, 1727
Tth111I	GACNNNGTC	1 cut(s)	1214
Vha464I	CTTAAG	1 cut(s)	2057
VpaK11BI	GGWCC	3 cut(s)	380, 1897, 1975
VspI	ATTAAT	1 cut(s)	1509
XapI	RAATTY	6 cut(s)	321, 1237, 1938, 1969, 2338, 2448
XceI	RCATGY	3 cut(s)	521, 1489, 1893
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2076
XmiI	GTMKAC	2 cut(s)	1069, 1519
XspI	CTAG	4 cut(s)	86, 2162, 2174, 2279
Zsp2I	ATGCAT	2 cut(s)	793, 1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.