Rh7AG005800

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0011260
Physical Location & Seq
Reverse (-)
398485 .. 402650
4166 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG005800.1

Sequence Viewer

Length: 2436 bp
ATGTTATGGTGCGGTCGCCAACTCCCTCGTCGCCATGTTATTGACCAATTCACAACTCTACGCGCTTCATCAAACCCTCTTCACTACTACTGTAACTACACAAATCTCCTTGAAGCCTGCATTCGATCTAAATCTCTCGCTCAAGGCAAGATAATCCATCAACTTGTTATAAAAGACAATACCCAGATGGAGGACAGGTCTCTTCTACTTGAAAAACTAGCCCGGCTCTACATGGCCTGTAATCAAGTTGAGGTCGCACGCCGAGTGTTCGACGAAATTCCCCAACCAAATGTTATTATTTGGAACCTATTGATAAGAGCCTATGCATGGAACGGACCGTTTGAAAGAGCCATTGAGTTGTACTATGGCATGCTTGAACTGGGCGTTAAACCAAGCAAATACACGTACCCTTTTGTTCTCAAGGCATGCTCGGGTTTGCAGGCACTACATGTTGGTCAAGATATTCATCAACATGCGAAACGACTTGGGCTCGACTCTGACGTCTATGTTTGCACTGCTTTGATTGATTTGTACGCAAAATGTGGAGACTTGGTAGCTGCGCAGAGTGTGTTTGATGGTATGTTGTATAAAGATGTTGTGGCGTGGAATGCTATGATTGCTGGATTTTCGCTTCATGGTCTTTATGGTGACACTGCAGAGTTGCTGGTCCAAATGCAGAGAGCGGGAACTGCCCCGAATGCCTCTACCATTGTTGCGGTTCTTCCCACAGTGGCGCAAGCTACCGCGCTGAGGCTGAGCCAGGGGAAGGCAATACATGGTTACTCCATGAGGAGGAGGTTTAGTGATGACGTGGTACTTAGTACTGCGCTTTTGGATATGTATGCTAAATGTCAGTGCATAGTTTACGCGAGGAGAATCTTTGATGCAATGAGTGTCAGGAATGAGGTTTGTTGGAGTGCGATGATAGGCGCATATGTTGGCTGTGATTCCATGAGAGAGGCAATGTCATTGTTTGATGAAATAGTGGTGAAAGATGTAAGAAAACTGACACGAGTTACACTGGGGAGCATACTCCGAGCTTGCACAAAGCTAACTGATCTGAGCAGAGGGAGACGAGTACATTGTTATGCAATTAAAGCCGGTTTTGATTTAAATACAATGGTGGGCAACACCATCCTTTCTATGTATGCAAAGTGTGGGATTATAGATGATGCATTCAGGTTATTTGATATAATGGATCCAAAAGACACGGTTTCTTATGGTGCTATCATCTCAGGCTGTGCGCAGAATGGTTATGCAAAGGAAGCTTTGCTTATATTCCACCAAATGCAGTTGTCTGGGATTGATCCAGATTTGGCAACCTTGGCAGGTGTTTTGCCGGCTTGTTCACATTTGGCAGCCCTGCAACATGGGGCCTGTGGCCATGGTTTTTCAATTGTTCATGGCTTTGTTACAGACACTTCAATTTGTAATGCCTTAATAGACATGTACTCGAAATGTGGGAAGATCCACATAGGCAGGCAAGTATTCGACAGAATGCTTAAGCGGGATACTGTCTCATGGAATGCAATGATAGTTGGTTATGGGATTCATGGCCTTGGGAAGGAAGCAATTTCACAGTTCCACAATATGCAGGCAGCTGGAATAAAGCCCGACGATGTGACTTTCATTGGCCTCTTATCTGCTTGCAGTCATTCGGGGCTTGTCACTGAAGGAAAACACTGGTTTAGTGCTATGAGACAAGATTTCAGCATAACCCCAAGGATGGAACACTACATATGCATGGTGGATCTTCTTGCCCGAACTGGACTGTTGGCCGAGGCGCATAGTTTCATTCAAAGCATGCCATTTGAGGCTGATGTTCGAGTATGGAGTGCACTACTTGCTGCATGTAGGGTTCACAATAATATTGAACTTGGGGAAGAAGTGTCCAGGAAAGTTCAAGGGCTAGGATCTGAAGGTACTGGAAATTTGGTCCTCTTATCTAATATGTACAGTTCTATTGGGAGATGGGATGATGCAGCGCATGTCAGAATTAAACAGAAGGATCAAGGCCTTAAGAAGAGTCCAGGATGTAGTTGGGTCGAGATTAATGGGGTGATTCATGGATTTCTCGGTGGAGATCAGTCCCATCCTGAATCGGCTCAGATACATGAAAAATTAGAGGAACTGCTAGTAGACATGAAAAGGATGGGATATTGTACAGAAAATAGTTTTGTTCTCCAAGATGTTGAGGAAGAGGAGAAAGAAAGGATCCTCCTTTACCATAGTGAAAAACTAGCCATTGCTTATGGAATTCTTCATCTGAGCCCGGGGAAACCCATTTTTGTTACTAAAAATCTGCGGGTCTGTGGTGATTGCCATGCTGCTATAAAGTTCATCTCTCTTGTTACAAAGAGAGAGATAACCGTAAGAGATGTGAGTCGGTTTCATCATTTCAGTGATGGAAATTGCAGTTGTGCAGACTTTTGGTGA

Protein Analysis

811

Amino Acids

90.26

Weight (kDa)

7.53

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 96 - 143 2.3e-10 PPR repeat family
PPR_2 PF13041 402 - 449 3.8e-07 PPR repeat family
PPR PF01535 405 - 435 5.1e-06 PPR repeat
PPR_2 PF13041 503 - 551 2.5e-10 PPR repeat family
E_motif PF20431 621 - 683 5.5e-18 E motif
Eplus_motif PF20430 688 - 712 2e-07 E+ motif
DYW_deaminase PF14432 719 - 811 2e-39 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 170
AarI CACCTGC 1 cut(s) 1319
AasI GACNNNNNNGTC 1 cut(s) 500
AatII GACGTC 1 cut(s) 504
Acc16I TGCGCA 2 cut(s) 561, 1245
Acc36I ACCTGC 1 cut(s) 1319
AccBSI CCGCTC 1 cut(s) 683
AccI GTMKAC 1 cut(s) 2139
AccII CGCG 3 cut(s) 63, 746, 869
AciI CCGC 6 cut(s) 12, 683, 716, 744, 1507, 2305
AclWI GGATC 9 cut(s) 1193, 1206, 1301, 1462, 1758, 1921, 2016, 2209, 2222
AcoI YGGCCR 2 cut(s) 1381, 1776
AcsI RAATTY 3 cut(s) 276, 1930, 2256
AcuI CTGAAG 2 cut(s) 1692, 1938
AcyI GRCGYC 1 cut(s) 501
AfiI CCNNNNNNNGG 7 cut(s) 190, 327, 750, 766, 792, 1564, 1726
AflII CTTAAG 2 cut(s) 1502, 2018
AflIII ACRYGT 3 cut(s) 402, 448, 1446
AgsI TTSAA 9 cut(s) 113, 212, 344, 377, 1395, 1425, 1799, 1874, 1904
AjiI CACGTC 1 cut(s) 811
AjnI CCWGG 3 cut(s) 759, 1892, 2029
AluBI AGCT 6 cut(s) 557, 740, 1040, 1051, 1268, 1601
AluI AGCT 6 cut(s) 557, 740, 1040, 1051, 1268, 1601
Alw21I GWGCWC 1 cut(s) 1840
Alw26I GTCTC 5 cut(s) 204, 540, 1066, 1522, 1693
Alw44I GTGCAC 1 cut(s) 1836
AlwI GGATC 9 cut(s) 1193, 1206, 1301, 1462, 1758, 1921, 2016, 2209, 2222
Ama87I CYCGRG 2 cut(s) 430, 2272
AoxI GGCC 7 cut(s) 234, 1374, 1381, 1555, 1633, 1776, 2014
ApaLI GTGCAC 1 cut(s) 1836
ApeKI GCWGC 6 cut(s) 557, 1358, 1598, 1847, 1982, 2327
ApoI RAATTY 3 cut(s) 276, 1930, 2256
AseI ATTAAT 1 cut(s) 2052
AspLEI GCGC 9 cut(s) 65, 562, 736, 748, 829, 932, 1246, 1786, 1987
AspS9I GGNCC 4 cut(s) 335, 667, 1374, 1936
AsuC2I CCSGG 3 cut(s) 223, 2273, 2274
AsuHPI GGTGA 4 cut(s) 659, 1000, 2071, 2327
AvaI CYCGRG 2 cut(s) 430, 2272
AvaII GGWCC 3 cut(s) 335, 667, 1936
BaeGI GKGCMC 1 cut(s) 1840
BalI TGGCCA 1 cut(s) 1383
BamHI GGATCC 2 cut(s) 1198, 2214
BanII GRGCYC 2 cut(s) 492, 2273
BauI CACGAG 1 cut(s) 1011
Bbv12I GWGCWC 1 cut(s) 1840
BbvCI CCTCAGC 1 cut(s) 749
BbvI GCAGC 6 cut(s) 544, 1370, 1610, 1834, 1994, 2314
BccI CCATC 9 cut(s) 165, 181, 569, 1142, 1720, 1965, 2100, 2146, 2399
BciT130I CCWGG 3 cut(s) 761, 1894, 2031
BciVI GTATCC 1 cut(s) 1504
BcnI CCSGG 3 cut(s) 223, 2273, 2274
BcoDI GTCTC 5 cut(s) 204, 540, 1066, 1522, 1693
BfaI CTAG 4 cut(s) 218, 1910, 2135, 2240
BfmI CTRYAG 1 cut(s) 654
BfrI CTTAAG 2 cut(s) 1502, 2018
BfuAI ACCTGC 1 cut(s) 1319
BfuI GTATCC 1 cut(s) 1504
BisI GCNGC 6 cut(s) 558, 1359, 1599, 1848, 1983, 2328
BlpI GCTNAGC 1 cut(s) 755
BlsI GCNGC 6 cut(s) 559, 1360, 1600, 1849, 1984, 2329
BmcAI AGTACT 1 cut(s) 823
Bme1390I CCNGG 6 cut(s) 223, 761, 1894, 2031, 2273, 2274
Bme18I GGWCC 3 cut(s) 335, 667, 1936
BmeT110I CYCGRG 2 cut(s) 430, 2272
BmgBI CACGTC 1 cut(s) 811
BmgT120I GGNCC 4 cut(s) 335, 667, 1374, 1936
BmiI GGNNCC 4 cut(s) 305, 1200, 1375, 2216
BmrFI CCNGG 6 cut(s) 223, 761, 1894, 2031, 2273, 2274
BmrI ACTGGG 2 cut(s) 389, 1031
BmsI GCATC 3 cut(s) 874, 1162, 1969
BmuI ACTGGG 2 cut(s) 389, 1031
Bpu10I CCTNAGC 1 cut(s) 749
Bpu1102I GCTNAGC 1 cut(s) 755
BpuEI CTTGAG 2 cut(s) 126, 404
BpuMI CCSGG 3 cut(s) 223, 2273, 2274
BsaAI YACGTR 1 cut(s) 405
BsaBI GATNNNNATC 2 cut(s) 130, 465
BsaHI GRCGYC 1 cut(s) 501
BsaI GGTCTC 1 cut(s) 204
BsaJI CCNNGG 8 cut(s) 760, 1323, 1384, 1558, 1721, 1779, 2272, 2273
BsaXI ACNNNNNCTCC 6 cut(s) 182, 212, 537, 567, 787, 817
Bsc4I CCNNNNNNNGG 7 cut(s) 190, 327, 750, 766, 792, 1564, 1726
Bse118I RCCGGY 2 cut(s) 1100, 1339
Bse1I ACTGG 5 cut(s) 384, 1026, 1688, 1771, 1930
Bse3DI GCAATG 4 cut(s) 894, 969, 1536, 2244
Bse8I GATNNNNATC 2 cut(s) 130, 465
BseBI CCWGG 3 cut(s) 761, 1894, 2031
BseDI CCNNGG 8 cut(s) 760, 1323, 1384, 1558, 1721, 1779, 2272, 2273
BseGI GGATG 6 cut(s) 1134, 1731, 1981, 2039, 2092, 2157
BseJI GATNNNNATC 2 cut(s) 130, 465
BseLI CCNNNNNNNGG 7 cut(s) 190, 327, 750, 766, 792, 1564, 1726
BseMI GCAATG 4 cut(s) 894, 969, 1536, 2244
BseMII CTCAG 6 cut(s) 740, 746, 1052, 1248, 2120, 2258
BseNI ACTGG 5 cut(s) 384, 1026, 1688, 1771, 1930
BseRI GAGGAG 4 cut(s) 805, 808, 886, 2216
BseSI GKGCMC 1 cut(s) 1840
BseXI GCAGC 6 cut(s) 544, 1370, 1610, 1834, 1994, 2314
Bsh1236I CGCG 3 cut(s) 63, 746, 869
Bsh1285I CGRYCG 1 cut(s) 16
BshFI GGCC 7 cut(s) 236, 1376, 1383, 1557, 1635, 1778, 2016
BsiEI CGRYCG 1 cut(s) 16
BsiHKAI GWGCWC 1 cut(s) 1840
BsiHKCI CYCGRG 2 cut(s) 430, 2272
BsiSI CCGG 4 cut(s) 223, 1101, 1340, 2273
BslFI GGGAC 1 cut(s) 2074
BslI CCNNNNNNNGG 7 cut(s) 190, 327, 750, 766, 792, 1564, 1726
BsmAI GTCTC 5 cut(s) 204, 540, 1066, 1522, 1693
BsmBI CGTCTC 1 cut(s) 1066
BsmFI GGGAC 1 cut(s) 2074
BsmI GAATGC 6 cut(s) 120, 613, 703, 1175, 1503, 1531
BsnI GGCC 7 cut(s) 236, 1376, 1383, 1557, 1635, 1778, 2016
Bso31I GGTCTC 1 cut(s) 204
BsoBI CYCGRG 2 cut(s) 430, 2272
Bsp1286I GDGCHC 3 cut(s) 492, 1840, 2273
Bsp1407I TGTACA 2 cut(s) 1953, 2162
Bsp1720I GCTNAGC 1 cut(s) 755
Bsp19I CCATGG 1 cut(s) 1384
BspACI CCGC 6 cut(s) 12, 683, 716, 744, 1507, 2305
BspANI GGCC 7 cut(s) 236, 1376, 1383, 1557, 1635, 1778, 2016
BspCNI CTCAG 6 cut(s) 741, 747, 1053, 1247, 2119, 2259
BspFNI CGCG 3 cut(s) 63, 746, 869
BspLI GGNNCC 4 cut(s) 305, 1200, 1375, 2216
BspMAI CTGCAG 1 cut(s) 658
BspMI ACCTGC 1 cut(s) 1319
BspPI GGATC 9 cut(s) 1193, 1206, 1301, 1462, 1758, 1921, 2016, 2209, 2222
BspTI CTTAAG 2 cut(s) 1502, 2018
BspTNI GGTCTC 1 cut(s) 204
BsrBI CCGCTC 1 cut(s) 683
BsrDI GCAATG 4 cut(s) 894, 969, 1536, 2244
BsrFI RCCGGY 2 cut(s) 1100, 1339
BsrGI TGTACA 2 cut(s) 1953, 2162
BsrI ACTGG 5 cut(s) 384, 1026, 1688, 1771, 1930
BssAI RCCGGY 2 cut(s) 1100, 1339
BssECI CCNNGG 8 cut(s) 760, 1323, 1384, 1558, 1721, 1779, 2272, 2273
BssNI GRCGYC 1 cut(s) 501
BssSI CACGAG 1 cut(s) 1011
BssT1I CCWWGG 4 cut(s) 1323, 1384, 1558, 1721
Bst2BI CACGAG 1 cut(s) 1011
Bst2UI CCWGG 3 cut(s) 761, 1894, 2031
Bst4CI ACNGT 9 cut(s) 92, 339, 730, 1213, 1516, 1581, 1773, 1958, 2371
Bst6I CTCTTC 4 cut(s) 84, 207, 2018, 2193
BstACI GRCGYC 1 cut(s) 501
BstAFI CTTAAG 2 cut(s) 1502, 2018
BstAPI GCANNNNNTGC 1 cut(s) 1844
BstAUI TGTACA 2 cut(s) 1953, 2162
BstBAI YACGTR 1 cut(s) 405
BstDEI CTNAG 7 cut(s) 749, 755, 818, 1061, 1234, 2106, 2267
BstDSI CCRYGG 1 cut(s) 1384
BstENI CCTNNNNNAGG 1 cut(s) 1562
BstF5I GGATG 6 cut(s) 1134, 1731, 1981, 2039, 2092, 2157
BstFNI CGCG 3 cut(s) 63, 746, 869
BstHHI GCGC 9 cut(s) 65, 562, 736, 748, 829, 932, 1246, 1786, 1987
BstMAI GTCTC 5 cut(s) 204, 540, 1066, 1522, 1693
BstMCI CGRYCG 1 cut(s) 16
BstMWI GCNNNNNNNGC 8 cut(s) 608, 617, 689, 698, 1097, 1265, 1325, 1844
BstNI CCWGG 3 cut(s) 761, 1894, 2031
BstNSI RCATGY 8 cut(s) 373, 429, 452, 476, 1450, 1807, 1854, 1991
BstSCI CCNGG 6 cut(s) 221, 759, 1892, 2029, 2271, 2272
BstSFI CTRYAG 1 cut(s) 654
BstSLI GKGCMC 1 cut(s) 1840
BstUI CGCG 3 cut(s) 63, 746, 869
BstV1I GCAGC 6 cut(s) 544, 1370, 1610, 1834, 1994, 2314
BstX2I RGATCY 5 cut(s) 1198, 1467, 1750, 1913, 2214
BstYI RGATCY 5 cut(s) 1198, 1467, 1750, 1913, 2214
BsuI GTATCC 1 cut(s) 1504
BsuRI GGCC 7 cut(s) 236, 1376, 1383, 1557, 1635, 1778, 2016
BtgI CCRYGG 1 cut(s) 1384
BtgZI GCGATG 1 cut(s) 935
BtrI CACGTC 1 cut(s) 811
BtsCI GGATG 6 cut(s) 1134, 1731, 1981, 2039, 2092, 2157
BtsI GCAGTG 2 cut(s) 513, 651
BtsIMutI CAGTG 8 cut(s) 513, 651, 735, 860, 1019, 1668, 1681, 2407
BveI ACCTGC 1 cut(s) 1319
CfoI GCGC 9 cut(s) 65, 562, 736, 748, 829, 932, 1246, 1786, 1987
Cfr10I RCCGGY 2 cut(s) 1100, 1339
Cfr13I GGNCC 4 cut(s) 335, 667, 1374, 1936
Cfr9I CCCGGG 1 cut(s) 2272
CpoI CGGWCCG 1 cut(s) 335
CspI CGGWCCG 1 cut(s) 335
DdeI CTNAG 7 cut(s) 749, 755, 818, 1061, 1234, 2106, 2267
DraI TTTAAA 1 cut(s) 1113
DrdI GACNNNNNNGTC 1 cut(s) 500
DseDI GACNNNNNNGTC 1 cut(s) 500
EaeI YGGCCR 2 cut(s) 1381, 1776
Eam1104I CTCTTC 4 cut(s) 84, 207, 2018, 2193
EarI CTCTTC 4 cut(s) 84, 207, 2018, 2193
Eco130I CCWWGG 4 cut(s) 1323, 1384, 1558, 1721
Eco147I AGGCCT 1 cut(s) 2016
Eco24I GRGCYC 2 cut(s) 492, 2273
Eco31I GGTCTC 1 cut(s) 204
Eco47I GGWCC 3 cut(s) 335, 667, 1936
Eco57I CTGAAG 2 cut(s) 1692, 1938
Eco88I CYCGRG 2 cut(s) 430, 2272
EcoNI CCTNNNNNAGG 1 cut(s) 1562
EcoO109I RGGNCCY 1 cut(s) 1374
EcoRI GAATTC 1 cut(s) 2256
EcoRII CCWGG 3 cut(s) 759, 1892, 2029
EcoT14I CCWWGG 4 cut(s) 1323, 1384, 1558, 1721
EcoT22I ATGCAT 3 cut(s) 328, 1177, 1745
EcoT38I GRGCYC 2 cut(s) 492, 2273
ErhI CCWWGG 4 cut(s) 1323, 1384, 1558, 1721
Esp3I CGTCTC 1 cut(s) 1066
FalI AAGNNNNNCTT 2 cut(s) 1257, 1289
FaqI GGGAC 1 cut(s) 2074
FauI CCCGC 3 cut(s) 676, 1500, 2298
FauNDI CATATG 2 cut(s) 934, 1739
FblI GTMKAC 1 cut(s) 2139
Fnu4HI GCNGC 6 cut(s) 558, 1359, 1599, 1848, 1983, 2328
FokI GGATG 6 cut(s) 1121, 1738, 1988, 2046, 2079, 2164
FriOI GRGCYC 2 cut(s) 492, 2273
Fsp4HI GCNGC 6 cut(s) 558, 1359, 1599, 1848, 1983, 2328
FspBI CTAG 4 cut(s) 218, 1910, 2135, 2240
FspI TGCGCA 2 cut(s) 561, 1245
GlaI GCGC 9 cut(s) 64, 561, 735, 747, 828, 931, 1245, 1785, 1986
GluI GCNGC 6 cut(s) 558, 1359, 1599, 1848, 1983, 2328
HaeIII GGCC 7 cut(s) 236, 1376, 1383, 1557, 1635, 1778, 2016
HapII CCGG 4 cut(s) 223, 1101, 1340, 2273
HhaI GCGC 9 cut(s) 65, 562, 736, 748, 829, 932, 1246, 1786, 1987
Hin1I GRCGYC 1 cut(s) 501
Hin6I GCGC 9 cut(s) 63, 560, 734, 746, 827, 930, 1244, 1784, 1985
HinP1I GCGC 9 cut(s) 63, 560, 734, 746, 827, 930, 1244, 1784, 1985
HindIII AAGCTT 1 cut(s) 1266
HinfI GANTC 8 cut(s) 494, 876, 947, 1549, 2026, 2062, 2099, 2383
HpaII CCGG 4 cut(s) 223, 1101, 1340, 2273
HphI GGTGA 4 cut(s) 659, 1000, 2071, 2327
Hpy166II GTNNAC 5 cut(s) 865, 1349, 1838, 1861, 2140
Hpy188I TCNGA 7 cut(s) 499, 1037, 1062, 1918, 1994, 2109, 2268
Hpy188III TCNNGA 5 cut(s) 458, 898, 1310, 2047, 2096
Hpy8I GTNNAC 5 cut(s) 865, 1349, 1838, 1861, 2140
Hpy99I CGWCG 3 cut(s) 33, 275, 1619
HpyAV CCTTC 5 cut(s) 760, 1558, 1667, 1913, 1999
HpyCH4III ACNGT 9 cut(s) 92, 339, 730, 1213, 1516, 1581, 1773, 1958, 2371
HpyCH4IV ACGT 3 cut(s) 404, 501, 810
HpyF10VI GCNNNNNNNGC 8 cut(s) 608, 617, 689, 698, 1097, 1265, 1325, 1844
HpyF3I CTNAG 7 cut(s) 749, 755, 818, 1061, 1234, 2106, 2267
HpySE526I ACGT 3 cut(s) 404, 501, 810
Hsp92I GRCGYC 1 cut(s) 501
HspAI GCGC 9 cut(s) 63, 560, 734, 746, 827, 930, 1244, 1784, 1985
KroI GCCGGC 1 cut(s) 1339
KroNI GCCGGC 1 cut(s) 1341
LmnI GCTCC 1 cut(s) 1026
Lsp1109I GCAGC 6 cut(s) 544, 1370, 1610, 1834, 1994, 2314
LweI GCATC 3 cut(s) 874, 1162, 1969
MaeI CTAG 4 cut(s) 218, 1910, 2135, 2240
MaeII ACGT 3 cut(s) 404, 501, 810
MaeIII GTNAC 9 cut(s) 92, 647, 779, 1015, 1411, 1621, 1666, 2290, 2350
MbiI CCGCTC 1 cut(s) 683
MboII GAAGA 9 cut(s) 71, 194, 713, 1477, 1745, 1895, 2035, 2210, 2252
MfeI CAATTG 1 cut(s) 1395
MflI RGATCY 5 cut(s) 1198, 1467, 1750, 1913, 2214
MhlI GDGCHC 3 cut(s) 492, 1840, 2273
MlsI TGGCCA 1 cut(s) 1383
MluNI TGGCCA 1 cut(s) 1383
MlyI GAGTC 3 cut(s) 488, 2035, 2392
MmeI TCCRAC 1 cut(s) 893
Mox20I TGGCCA 1 cut(s) 1383
Mph1103I ATGCAT 3 cut(s) 328, 1177, 1745
MroNI GCCGGC 1 cut(s) 1339
MscI TGGCCA 1 cut(s) 1383
MseI TTAA 8 cut(s) 387, 1095, 1112, 1439, 1503, 1998, 2019, 2052
MslI CAYNNNNRTG 4 cut(s) 471, 1086, 1742, 2400
Msp20I TGGCCA 1 cut(s) 1383
MspA1I CMGCKG 1 cut(s) 1601
MspCI CTTAAG 2 cut(s) 1502, 2018
MspI CCGG 4 cut(s) 223, 1101, 1340, 2273
MspR9I CCNGG 6 cut(s) 223, 761, 1894, 2031, 2273, 2274
MunI CAATTG 1 cut(s) 1395
Mva1269I GAATGC 6 cut(s) 120, 613, 703, 1175, 1503, 1531
MvaI CCWGG 3 cut(s) 761, 1894, 2031
MvnI CGCG 3 cut(s) 63, 746, 869
MwoI GCNNNNNNNGC 8 cut(s) 608, 617, 689, 698, 1097, 1265, 1325, 1844
NaeI GCCGGC 1 cut(s) 1341
NciI CCSGG 3 cut(s) 223, 2273, 2274
NcoI CCATGG 1 cut(s) 1384
NdeI CATATG 2 cut(s) 934, 1739
NgoMIV GCCGGC 1 cut(s) 1339
NlaIV GGNNCC 4 cut(s) 305, 1200, 1375, 2216
NmeAIII GCCGAG 2 cut(s) 287, 1804
NmuCI GTSAC 3 cut(s) 647, 1621, 1666
NsbI TGCGCA 2 cut(s) 561, 1245
NsiI ATGCAT 3 cut(s) 328, 1177, 1745
NspI RCATGY 8 cut(s) 373, 429, 452, 476, 1450, 1807, 1854, 1991
PaeI GCATGC 3 cut(s) 373, 429, 1807
PaqCI CACCTGC 1 cut(s) 1319
PceI AGGCCT 1 cut(s) 2016
PciI ACATGT 2 cut(s) 448, 1446
PcsI WCGNNNNNNNCGW 1 cut(s) 498
PctI GAATGC 6 cut(s) 120, 613, 703, 1175, 1503, 1531
PdiI GCCGGC 1 cut(s) 1341
PfeI GAWTC 5 cut(s) 876, 947, 1549, 2062, 2099
PfoI TCCNGGA 2 cut(s) 1892, 2029
PkrI GCNGC 6 cut(s) 559, 1360, 1600, 1849, 1984, 2329
PleI GAGTC 3 cut(s) 488, 2034, 2391
PpsI GAGTC 3 cut(s) 488, 2034, 2391
Ppu21I YACGTR 1 cut(s) 405
PscI ACATGT 2 cut(s) 448, 1446
PshBI ATTAAT 1 cut(s) 2052
PsiI TTATAA 1 cut(s) 170
Psp6I CCWGG 3 cut(s) 759, 1892, 2029
PspGI CCWGG 3 cut(s) 759, 1892, 2029
PspN4I GGNNCC 4 cut(s) 305, 1200, 1375, 2216
PspPI GGNCC 4 cut(s) 335, 667, 1374, 1936
PstI CTGCAG 1 cut(s) 658
PsuI RGATCY 5 cut(s) 1198, 1467, 1750, 1913, 2214
PvuII CAGCTG 1 cut(s) 1601
RseI CAYNNNNRTG 4 cut(s) 471, 1086, 1742, 2400
Rsr2I CGGWCCG 1 cut(s) 335
RsrII CGGWCCG 1 cut(s) 335
SaqAI TTAA 8 cut(s) 387, 1095, 1112, 1439, 1503, 1998, 2019, 2052
SatI GCNGC 6 cut(s) 558, 1359, 1599, 1848, 1983, 2328
Sau96I GGNCC 4 cut(s) 335, 667, 1374, 1936
ScaI AGTACT 1 cut(s) 823
SchI GAGTC 3 cut(s) 488, 2035, 2392
ScrFI CCNGG 6 cut(s) 223, 761, 1894, 2031, 2273, 2274
SduI GDGCHC 3 cut(s) 492, 1840, 2273
SfaNI GCATC 3 cut(s) 874, 1162, 1969
SfcI CTRYAG 1 cut(s) 654
SinI GGWCC 3 cut(s) 335, 667, 1936
SmaI CCCGGG 1 cut(s) 2274
SmiI ATTTAAAT 1 cut(s) 1113
SmiMI CAYNNNNRTG 4 cut(s) 471, 1086, 1742, 2400
SmlI CTYRAG 4 cut(s) 141, 419, 1502, 2018
SmoI CTYRAG 4 cut(s) 141, 419, 1502, 2018
SphI GCATGC 3 cut(s) 373, 429, 1807
SseBI AGGCCT 1 cut(s) 2016
SsiI CCGC 6 cut(s) 12, 683, 716, 744, 1507, 2305
SspI AATATT 1 cut(s) 1870
SspMI CTAG 4 cut(s) 218, 1910, 2135, 2240
StuI AGGCCT 1 cut(s) 2016
StyD4I CCNGG 6 cut(s) 221, 759, 1892, 2029, 2271, 2272
StyI CCWWGG 4 cut(s) 1323, 1384, 1558, 1721
SwaI ATTTAAAT 1 cut(s) 1113
TaaI ACNGT 9 cut(s) 92, 339, 730, 1213, 1516, 1581, 1773, 1958, 2371
TaiI ACGT 3 cut(s) 407, 504, 813
TaqI TCGA 7 cut(s) 124, 270, 492, 1454, 1491, 1825, 2046
TatI WGTACW 6 cut(s) 360, 821, 1078, 1449, 1953, 2162
TfiI GAWTC 5 cut(s) 876, 947, 1549, 2062, 2099
Tru1I TTAA 8 cut(s) 387, 1095, 1112, 1439, 1503, 1998, 2019, 2052
Tru9I TTAA 8 cut(s) 387, 1095, 1112, 1439, 1503, 1998, 2019, 2052
TscAI CASTG 8 cut(s) 520, 658, 735, 860, 1026, 1675, 1688, 2407
TseFI GTSAC 3 cut(s) 647, 1621, 1666
TseI GCWGC 6 cut(s) 557, 1358, 1598, 1847, 1982, 2327
Tsp45I GTSAC 3 cut(s) 647, 1621, 1666
TspGWI ACGGA 1 cut(s) 348
TspMI CCCGGG 1 cut(s) 2272
TspRI CASTG 8 cut(s) 520, 658, 735, 860, 1026, 1675, 1688, 2407
Vha464I CTTAAG 2 cut(s) 1502, 2018
VneI GTGCAC 1 cut(s) 1836
VpaK11BI GGWCC 3 cut(s) 335, 667, 1936
VspI ATTAAT 1 cut(s) 2052
XagI CCTNNNNNAGG 1 cut(s) 1562
XapI RAATTY 3 cut(s) 276, 1930, 2256
XceI RCATGY 8 cut(s) 373, 429, 452, 476, 1450, 1807, 1854, 1991
XcmI CCANNNNNNNNNTGG 1 cut(s) 2037
XmaI CCCGGG 1 cut(s) 2272
XmiI GTMKAC 1 cut(s) 2139
XspI CTAG 4 cut(s) 218, 1910, 2135, 2240
ZraI GACGTC 1 cut(s) 502
ZrmI AGTACT 1 cut(s) 823
Zsp2I ATGCAT 3 cut(s) 328, 1177, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.