SAGA-associated factor 11
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58575 AT5G58575 |
| fragaria_vesca | FvH4_3g39150 FvH4_3g39150 |
| malus_domestica | MD03G1063100.v1.1 MD11G1066600.v1.1 MD11G1071300.v1.1 MD11G1152800.v1.1 |
| prunus_persica | Prupe.6G053100_v2.0.a1 Prupe.6G053100_v2.0.a1 Prupe.6G053100_v2.0.a1 |
| pyrus_communis | pycom11g05640 pycom11g05660 pycom11g05950 |
| rosa_chinensis | RchiOBHm_Chr5g0070551 |
| rosa_laevigata | RLG00000036140 |
| rosa_multiflora | Rmu_sc0002443.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00010650 |
| rosa_rugosa | Rorug05G0406900 Rorug05G0407000 |
| rosa_samantha | Rh5AG462300 Rh5BG480400 Rh5CG504700 Rh5DG492400 |
| rosa_wichuraiana | Rw5G043050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 415 |
| Acc16I | TGCGCA | 1 cut(s) | 405 |
| AclWI | GGATC | 2 cut(s) | 78, 197 |
| AfaI | GTAC | 2 cut(s) | 397, 469 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| AgsI | TTSAA | 2 cut(s) | 149, 519 |
| AluBI | AGCT | 3 cut(s) | 200, 311, 401 |
| AluI | AGCT | 3 cut(s) | 200, 311, 401 |
| AlwI | GGATC | 2 cut(s) | 78, 197 |
| ApeKI | GCWGC | 1 cut(s) | 401 |
| AspLEI | GCGC | 1 cut(s) | 406 |
| AsuC2I | CCSGG | 1 cut(s) | 412 |
| AsuHPI | GGTGA | 1 cut(s) | 230 |
| BauI | CACGAG | 2 cut(s) | 372, 420 |
| BbsI | GAAGAC | 1 cut(s) | 21 |
| BbvI | GCAGC | 1 cut(s) | 388 |
| BccI | CCATC | 1 cut(s) | 270 |
| BcnI | CCSGG | 1 cut(s) | 412 |
| BfaI | CTAG | 1 cut(s) | 207 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BisI | GCNGC | 1 cut(s) | 402 |
| BlsI | GCNGC | 1 cut(s) | 403 |
| Bme1390I | CCNGG | 1 cut(s) | 412 |
| BmrFI | CCNGG | 1 cut(s) | 412 |
| BmsI | GCATC | 1 cut(s) | 110 |
| BpiI | GAAGAC | 1 cut(s) | 21 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 316, 348 |
| BpmI | CTGGAG | 1 cut(s) | 362 |
| BpuMI | CCSGG | 1 cut(s) | 412 |
| BsaWI | WCCGGW | 1 cut(s) | 494 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| Bse118I | RCCGGY | 1 cut(s) | 474 |
| BseGI | GGATG | 2 cut(s) | 262, 491 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| BseMII | CTCAG | 2 cut(s) | 59, 96 |
| BseRI | GAGGAG | 2 cut(s) | 324, 524 |
| BseXI | GCAGC | 1 cut(s) | 388 |
| BseYI | CCCAGC | 1 cut(s) | 320 |
| BsiSI | CCGG | 3 cut(s) | 412, 475, 495 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 186, 187 |
| Bsp143I | GATC | 3 cut(s) | 70, 136, 202 |
| BspCNI | CTCAG | 2 cut(s) | 58, 97 |
| BspPI | GGATC | 2 cut(s) | 78, 197 |
| BspQI | GCTCTTC | 1 cut(s) | 528 |
| BsrFI | RCCGGY | 1 cut(s) | 474 |
| BssAI | RCCGGY | 1 cut(s) | 474 |
| BssMI | GATC | 3 cut(s) | 70, 136, 202 |
| BssSI | CACGAG | 2 cut(s) | 372, 420 |
| Bst2BI | CACGAG | 2 cut(s) | 372, 420 |
| Bst4CI | ACNGT | 1 cut(s) | 467 |
| Bst6I | CTCTTC | 2 cut(s) | 147, 528 |
| BstDEI | CTNAG | 3 cut(s) | 45, 105, 167 |
| BstF5I | GGATG | 2 cut(s) | 262, 491 |
| BstHHI | GCGC | 1 cut(s) | 406 |
| BstKTI | GATC | 3 cut(s) | 73, 139, 205 |
| BstMBI | GATC | 3 cut(s) | 70, 136, 202 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 317, 412 |
| BstSCI | CCNGG | 1 cut(s) | 410 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstV1I | GCAGC | 1 cut(s) | 388 |
| BstV2I | GAAGAC | 1 cut(s) | 21 |
| BstX2I | RGATCY | 1 cut(s) | 70 |
| BstYI | RGATCY | 1 cut(s) | 70 |
| BtsCI | GGATG | 2 cut(s) | 262, 491 |
| CfoI | GCGC | 1 cut(s) | 406 |
| Cfr10I | RCCGGY | 1 cut(s) | 474 |
| Csp6I | GTAC | 2 cut(s) | 396, 468 |
| CviAII | CATG | 2 cut(s) | 295, 316 |
| CviQI | GTAC | 2 cut(s) | 396, 468 |
| DdeI | CTNAG | 3 cut(s) | 45, 105, 167 |
| DpnI | GATC | 3 cut(s) | 72, 138, 204 |
| DpnII | GATC | 3 cut(s) | 70, 136, 202 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 415 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 415 |
| Eam1104I | CTCTTC | 2 cut(s) | 147, 528 |
| EarI | CTCTTC | 2 cut(s) | 147, 528 |
| FaeI | CATG | 2 cut(s) | 298, 319 |
| FaiI | YATR | 9 cut(s) | 26, 60, 237, 248, 296, 317, 353, 442, 541 |
| FatI | CATG | 2 cut(s) | 294, 315 |
| Fnu4HI | GCNGC | 1 cut(s) | 402 |
| FokI | GGATG | 2 cut(s) | 249, 478 |
| Fsp4HI | GCNGC | 1 cut(s) | 402 |
| FspBI | CTAG | 1 cut(s) | 207 |
| FspI | TGCGCA | 1 cut(s) | 405 |
| GlaI | GCGC | 1 cut(s) | 405 |
| GluI | GCNGC | 1 cut(s) | 402 |
| GsaI | CCCAGC | 1 cut(s) | 324 |
| GsuI | CTGGAG | 1 cut(s) | 362 |
| HapII | CCGG | 3 cut(s) | 412, 475, 495 |
| HhaI | GCGC | 1 cut(s) | 406 |
| Hin1II | CATG | 2 cut(s) | 298, 319 |
| Hin6I | GCGC | 1 cut(s) | 404 |
| HinP1I | GCGC | 1 cut(s) | 404 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HinfI | GANTC | 1 cut(s) | 80 |
| HpaII | CCGG | 3 cut(s) | 412, 475, 495 |
| HphI | GGTGA | 1 cut(s) | 230 |
| Hpy166II | GTNNAC | 1 cut(s) | 244 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 48, 106 |
| Hpy188III | TCNNGA | 3 cut(s) | 134, 341, 420 |
| Hpy8I | GTNNAC | 1 cut(s) | 244 |
| HpyAV | CCTTC | 1 cut(s) | 276 |
| HpyCH4III | ACNGT | 1 cut(s) | 467 |
| HpyCH4IV | ACGT | 1 cut(s) | 53 |
| HpyCH4V | TGCA | 4 cut(s) | 101, 294, 503, 527 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 317, 412 |
| HpyF3I | CTNAG | 3 cut(s) | 45, 105, 167 |
| HpySE526I | ACGT | 1 cut(s) | 53 |
| Hsp92II | CATG | 2 cut(s) | 298, 319 |
| HspAI | GCGC | 1 cut(s) | 404 |
| Kzo9I | GATC | 3 cut(s) | 70, 136, 202 |
| LguI | GCTCTTC | 1 cut(s) | 528 |
| LmnI | GCTCC | 1 cut(s) | 337 |
| LpnPI | CCDG | 7 cut(s) | 306, 326, 425, 444, 488, 489, 508 |
| Lsp1109I | GCAGC | 1 cut(s) | 388 |
| LweI | GCATC | 1 cut(s) | 110 |
| MaeI | CTAG | 1 cut(s) | 207 |
| MaeII | ACGT | 1 cut(s) | 53 |
| MaeIII | GTNAC | 3 cut(s) | 54, 382, 417 |
| MalI | GATC | 3 cut(s) | 72, 138, 204 |
| MboI | GATC | 3 cut(s) | 70, 136, 202 |
| MboII | GAAGA | 7 cut(s) | 21, 24, 29, 161, 164, 170, 173 |
| MflI | RGATCY | 1 cut(s) | 70 |
| MluCI | AATT | 3 cut(s) | 142, 298, 457 |
| MmeI | TCCRAC | 1 cut(s) | 486 |
| MnlI | CCTC | 5 cut(s) | 148, 318, 345, 416, 502 |
| MslI | CAYNNNNRTG | 1 cut(s) | 106 |
| MspA1I | CMGCKG | 1 cut(s) | 401 |
| MspI | CCGG | 3 cut(s) | 412, 475, 495 |
| MspR9I | CCNGG | 1 cut(s) | 412 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 317, 412 |
| NciI | CCSGG | 1 cut(s) | 412 |
| NdeII | GATC | 3 cut(s) | 70, 136, 202 |
| NlaIII | CATG | 2 cut(s) | 298, 319 |
| NmuCI | GTSAC | 3 cut(s) | 54, 382, 417 |
| NsbI | TGCGCA | 1 cut(s) | 405 |
| PciSI | GCTCTTC | 1 cut(s) | 528 |
| PfeI | GAWTC | 1 cut(s) | 80 |
| PkrI | GCNGC | 1 cut(s) | 403 |
| PspFI | CCCAGC | 1 cut(s) | 320 |
| PsuI | RGATCY | 1 cut(s) | 70 |
| PvuII | CAGCTG | 1 cut(s) | 401 |
| RsaI | GTAC | 2 cut(s) | 397, 469 |
| RsaNI | GTAC | 2 cut(s) | 396, 468 |
| RseI | CAYNNNNRTG | 1 cut(s) | 106 |
| SapI | GCTCTTC | 1 cut(s) | 528 |
| SatI | GCNGC | 1 cut(s) | 402 |
| Sau3AI | GATC | 3 cut(s) | 70, 136, 202 |
| ScrFI | CCNGG | 1 cut(s) | 412 |
| SetI | ASST | 5 cut(s) | 56, 202, 313, 329, 403 |
| SfaNI | GCATC | 1 cut(s) | 110 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 106 |
| Sse9I | AATT | 3 cut(s) | 142, 298, 457 |
| SspMI | CTAG | 1 cut(s) | 207 |
| StyD4I | CCNGG | 1 cut(s) | 410 |
| TaaI | ACNGT | 1 cut(s) | 467 |
| TaiI | ACGT | 1 cut(s) | 56 |
| TaqI | TCGA | 2 cut(s) | 115, 307 |
| TasI | AATT | 3 cut(s) | 142, 298, 457 |
| TatI | WGTACW | 2 cut(s) | 395, 467 |
| TfiI | GAWTC | 1 cut(s) | 80 |
| TseFI | GTSAC | 3 cut(s) | 54, 382, 417 |
| TseI | GCWGC | 1 cut(s) | 401 |
| Tsp45I | GTSAC | 3 cut(s) | 54, 382, 417 |
| TspDTI | ATGAA | 4 cut(s) | 24, 30, 294, 311 |
| XspI | CTAG | 1 cut(s) | 207 |