SAGA-associated factor 11
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58575 AT5G58575 |
| fragaria_vesca | FvH4_3g39150 FvH4_3g39150 |
| malus_domestica | MD03G1063100.v1.1 MD11G1066600.v1.1 MD11G1071300.v1.1 MD11G1152800.v1.1 |
| prunus_persica | Prupe.6G053100_v2.0.a1 Prupe.6G053100_v2.0.a1 Prupe.6G053100_v2.0.a1 |
| pyrus_communis | pycom11g05640 pycom11g05660 pycom11g05950 |
| rosa_chinensis | RchiOBHm_Chr5g0070551 |
| rosa_laevigata | RLG00000036140 |
| rosa_multiflora | Rmu_sc0002443.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00010650 |
| rosa_rugosa | Rorug05G0406900 Rorug05G0407000 |
| rosa_samantha | Rh5AG462300 Rh5BG480400 Rh5CG504700 Rh5DG492400 |
| rosa_wichuraiana | Rw5G043050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 145 |
| AciI | CCGC | 1 cut(s) | 23 |
| AclWI | GGATC | 1 cut(s) | 14 |
| AcuI | CTGAAG | 1 cut(s) | 165 |
| AfaI | GTAC | 1 cut(s) | 86 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 32 |
| Alw21I | GWGCWC | 1 cut(s) | 82 |
| AlwI | GGATC | 1 cut(s) | 14 |
| Aor13HI | TCCGGA | 1 cut(s) | 145 |
| BauI | CACGAG | 1 cut(s) | 75 |
| Bbv12I | GWGCWC | 1 cut(s) | 82 |
| BccI | CCATC | 1 cut(s) | 199 |
| BsaWI | WCCGGW | 1 cut(s) | 145 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseAI | TCCGGA | 1 cut(s) | 145 |
| BseGI | GGATG | 2 cut(s) | 106, 154 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseMII | CTCAG | 1 cut(s) | 95 |
| BsiHKAI | GWGCWC | 1 cut(s) | 82 |
| BsiSI | CCGG | 1 cut(s) | 146 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 32 |
| Bsp1286I | GDGCHC | 1 cut(s) | 82 |
| Bsp13I | TCCGGA | 1 cut(s) | 145 |
| Bsp143I | GATC | 1 cut(s) | 19 |
| BspACI | CCGC | 1 cut(s) | 23 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspEI | TCCGGA | 1 cut(s) | 145 |
| BspPI | GGATC | 1 cut(s) | 14 |
| BspQI | GCTCTTC | 1 cut(s) | 180 |
| BssMI | GATC | 1 cut(s) | 19 |
| BssSI | CACGAG | 1 cut(s) | 75 |
| Bst2BI | CACGAG | 1 cut(s) | 75 |
| Bst6I | CTCTTC | 2 cut(s) | 133, 180 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstF5I | GGATG | 2 cut(s) | 106, 154 |
| BstKTI | GATC | 1 cut(s) | 22 |
| BstMBI | GATC | 1 cut(s) | 19 |
| BstX2I | RGATCY | 1 cut(s) | 19 |
| BstYI | RGATCY | 1 cut(s) | 19 |
| BtsCI | GGATG | 2 cut(s) | 106, 154 |
| Csp6I | GTAC | 1 cut(s) | 85 |
| CviJI | RGCY | 3 cut(s) | 36, 109, 190 |
| CviKI_1 | RGCY | 3 cut(s) | 36, 109, 190 |
| CviQI | GTAC | 1 cut(s) | 85 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DpnI | GATC | 1 cut(s) | 21 |
| DpnII | GATC | 1 cut(s) | 19 |
| Eam1104I | CTCTTC | 2 cut(s) | 133, 180 |
| EarI | CTCTTC | 2 cut(s) | 133, 180 |
| EciI | GGCGGA | 1 cut(s) | 12 |
| Eco57I | CTGAAG | 1 cut(s) | 165 |
| FaiI | YATR | 2 cut(s) | 51, 89 |
| FokI | GGATG | 2 cut(s) | 113, 161 |
| HapII | CCGG | 1 cut(s) | 146 |
| HpaII | CCGG | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 67, 184 |
| Hpy188III | TCNNGA | 1 cut(s) | 146 |
| HpyAV | CCTTC | 1 cut(s) | 36 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| Kpn2I | TCCGGA | 1 cut(s) | 145 |
| Kzo9I | GATC | 1 cut(s) | 19 |
| LguI | GCTCTTC | 1 cut(s) | 180 |
| LpnPI | CCDG | 2 cut(s) | 120, 159 |
| MalI | GATC | 1 cut(s) | 21 |
| MboI | GATC | 1 cut(s) | 19 |
| MboII | GAAGA | 3 cut(s) | 150, 171, 197 |
| MflI | RGATCY | 1 cut(s) | 19 |
| MhlI | GDGCHC | 1 cut(s) | 82 |
| MnlI | CCTC | 2 cut(s) | 50, 99 |
| MroI | TCCGGA | 1 cut(s) | 145 |
| MseI | TTAA | 1 cut(s) | 44 |
| MspI | CCGG | 1 cut(s) | 146 |
| NdeII | GATC | 1 cut(s) | 19 |
| PciSI | GCTCTTC | 1 cut(s) | 180 |
| PsuI | RGATCY | 1 cut(s) | 19 |
| RsaI | GTAC | 1 cut(s) | 86 |
| RsaNI | GTAC | 1 cut(s) | 85 |
| SapI | GCTCTTC | 1 cut(s) | 180 |
| SaqAI | TTAA | 1 cut(s) | 44 |
| Sau3AI | GATC | 1 cut(s) | 19 |
| SduI | GDGCHC | 1 cut(s) | 82 |
| SetI | ASST | 1 cut(s) | 159 |
| SgeI | CNNG | 7 cut(s) | 87, 89, 135, 147, 158, 170, 207 |
| SsiI | CCGC | 1 cut(s) | 23 |
| TatI | WGTACW | 1 cut(s) | 84 |
| Tru1I | TTAA | 1 cut(s) | 44 |
| Tru9I | TTAA | 1 cut(s) | 44 |
| TspDTI | ATGAA | 1 cut(s) | 165 |