Prupe.6G057700_v2.0.a1

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
4033455 .. 4036941
3487 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G057700.1

Sequence Viewer

Length: 1374 bp
ATGGAAGAATCACAGAACAACATAGAGAATGGGATCATTAGTGATAATTATAAGGCATTATTAGACAATAATCACAAGGAGCAGTGGGCTAATAATATTAATGGATCAAGAACACCTCCACAAAACATGGCAGCCTCCATGGTCCGCAAGAAGTCCGACCCGATACTCGTTTCCAATGTTCGCTTCCAAATGCTCAGAAGTTTGCTCAACAATTTGCAAGAGGTGGTTCTTGGCACCAAGCTTGCTCTGCTCTTCCCTGCCATTCCCCTTGCAATTGCGGCTGATTTTTATCACTTTGGAAGACCTTGGATTTTCGCTTTGAGCTTGCTTGGACTCACCCCACTTGCTGAACGTGTCAGCTTCCTCACTGAACAAATTGCTTACTTCACTGGTCCAACAGTTGGAGGCCTTCTTAATGCAACATGTGGCAATGCAACAGAGATGATAATAGCATTATTTGCTCTTCGCCAAAACAAAATCGACGTGGTGAAGTACTCTCTGTTGGGTTCCATTCTCTCCAACCTCCTCCTTGTGCTGGGGACCTCTCTCCTCTGCGGGGGTTTGGCCAACCTGAAAAAGGAACAAAGATATGATAGAAAACAGGCTGATGTGAATTCACTCCTGCTGCTGCTGGGGTTGCTTTGCCACATGCTGCCATTGTTGTTCAGATATGCGTCGGGGCTGAACAATCCCTTTGCCACCAACACTCTCCAGTTGTCTAGAATAAGCAGCATTTTTATGCTTATAGCATATGTTGCCTACATCTTCTTCCAGTTGAAAACCCACCGCCAGTTCTTTGAATCACAAGAGGGAGATGAAGATGAAGAAGAAGAAAAACCAGTGATAGGATTTTGGAGTGCATTCAGTTGGCTGGTTGGTATGACAATTATCATAGCTCTCTTGTCTGAGTATGTTGTGGGAACAATTGAGGCTGCATCAAATTCTTGGGGCATTTCTGTGACCTTCATCAGCATTATTTTGCTACCCATTGTGGGGAATGCTGCAGAACATGCTGGATCAATCATCTTTGCTCTCAAGAACAAGTTGGACATATCTTTGGGTGTTGCTTTAGGTTCTGCATCTCAAATTTCCATGTTTGTGGTCCCCTTAAGTGTGATTGTTGCCTGGATAATGGGTGTCCAAATGGATCTTGATTTCAATCTCCTTGAAACTGGTTCTCTTGCTTTCACTATAATTATCACAGCCTTCACATTGCAGGATGGAACTTCACATTATCTGAAAGGGGTCATTCTTTTCCTGTGCTACATTATTATTGCTGCTTGCTTTTTTGTTGACAAAATTCCCATGAATGAAACAACTGTGGGCACTTTGGGAACTGTACTTGAACCATCCTCAGGAGTCTTGGTTGCTTGA

Protein Analysis

458

Amino Acids

50.09

Weight (kDa)

5.35

Isoelectric Point (pI)

34.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 51
AccB1I GGYRCC 1 cut(s) 233
AccB7I CCANNNNNTGG 1 cut(s) 401
AciI CCGC 4 cut(s) 145, 278, 555, 787
AclWI GGATC 4 cut(s) 41, 112, 1024, 1155
AcoI YGGCCR 1 cut(s) 564
AcsI RAATTY 4 cut(s) 613, 940, 1086, 1299
AfaI GTAC 2 cut(s) 494, 1341
AfiI CCNNNNNNNGG 8 cut(s) 401, 535, 556, 577, 845, 992, 993, 1355
AflII CTTAAG 1 cut(s) 1108
AflIII ACRYGT 2 cut(s) 352, 422
AgsI TTSAA 5 cut(s) 778, 800, 1159, 1169, 1346
AjiI CACGTC 1 cut(s) 484
AjnI CCWGG 1 cut(s) 1124
AjuI GAANNNNNNNTTGG 2 cut(s) 167, 199
AluBI AGCT 4 cut(s) 241, 324, 360, 896
AluI AGCT 4 cut(s) 241, 324, 360, 896
AlwI GGATC 4 cut(s) 41, 112, 1024, 1155
AoxI GGCC 2 cut(s) 406, 564
ApeKI GCWGC 8 cut(s) 131, 625, 628, 652, 729, 932, 1001, 1277
ApoI RAATTY 4 cut(s) 613, 940, 1086, 1299
AseI ATTAAT 1 cut(s) 99
AspS9I GGNCC 4 cut(s) 142, 392, 540, 1102
AsuHPI GGTGA 2 cut(s) 328, 499
AvaII GGWCC 4 cut(s) 142, 392, 540, 1102
AxyI CCTNAGG 1 cut(s) 1354
BaeGI GKGCMC 1 cut(s) 1328
BalI TGGCCA 1 cut(s) 566
BanI GGYRCC 1 cut(s) 233
BbsI GAAGAC 1 cut(s) 307
BbvI GCAGC 8 cut(s) 143, 612, 615, 639, 741, 919, 988, 1264
BccI CCATC 2 cut(s) 1214, 1357
BciT130I CCWGG 1 cut(s) 1126
BfaI CTAG 1 cut(s) 720
BfmI CTRYAG 1 cut(s) 1002
BfrI CTTAAG 1 cut(s) 1108
BisI GCNGC 9 cut(s) 132, 279, 626, 629, 653, 730, 933, 1002, 1278
BlsI GCNGC 9 cut(s) 133, 280, 627, 630, 654, 731, 934, 1003, 1279
BmcAI AGTACT 1 cut(s) 494
Bme1390I CCNGG 1 cut(s) 1126
Bme18I GGWCC 4 cut(s) 142, 392, 540, 1102
BmgBI CACGTC 1 cut(s) 484
BmgT120I GGNCC 4 cut(s) 142, 392, 540, 1102
BmiI GGNNCC 4 cut(s) 235, 508, 541, 1104
BmrFI CCNGG 1 cut(s) 1126
BmsI GCATC 2 cut(s) 944, 1088
BpiI GAAGAC 1 cut(s) 307
BpmI CTGGAG 1 cut(s) 695
BpuEI CTTGAG 1 cut(s) 1019
BsaBI GATNNNNATC 2 cut(s) 288, 1158
BsaJI CCNNGG 2 cut(s) 138, 305
BsaXI ACNNNNNCTCC 1 cut(s) 1350
Bsc4I CCNNNNNNNGG 8 cut(s) 401, 535, 556, 577, 845, 992, 993, 1355
Bse1I ACTGG 6 cut(s) 394, 712, 772, 790, 839, 1177
Bse21I CCTNAGG 1 cut(s) 1354
Bse3DI GCAATG 2 cut(s) 436, 1211
Bse8I GATNNNNATC 2 cut(s) 288, 1158
BseBI CCWGG 1 cut(s) 1126
BseDI CCNNGG 2 cut(s) 138, 305
BseGI GGATG 2 cut(s) 1225, 1349
BseJI GATNNNNATC 2 cut(s) 288, 1158
BseLI CCNNNNNNNGG 8 cut(s) 401, 535, 556, 577, 845, 992, 993, 1355
BseMI GCAATG 2 cut(s) 436, 1211
BseMII CTCAG 3 cut(s) 208, 897, 1368
BseNI ACTGG 6 cut(s) 394, 712, 772, 790, 839, 1177
BseRI GAGGAG 2 cut(s) 515, 539
BseSI GKGCMC 1 cut(s) 1328
BseXI GCAGC 8 cut(s) 143, 612, 615, 639, 741, 919, 988, 1264
BseYI CCCAGC 2 cut(s) 535, 631
BshFI GGCC 2 cut(s) 408, 566
BshNI GGYRCC 1 cut(s) 233
BslFI GGGAC 2 cut(s) 553, 1088
BslI CCNNNNNNNGG 8 cut(s) 401, 535, 556, 577, 845, 992, 993, 1355
BsmFI GGGAC 2 cut(s) 553, 1088
BsmI GAATGC 2 cut(s) 860, 1003
BsnI GGCC 2 cut(s) 408, 566
Bsp1286I GDGCHC 1 cut(s) 1328
Bsp143I GATC 4 cut(s) 33, 104, 1016, 1147
Bsp19I CCATGG 1 cut(s) 138
BspACI CCGC 4 cut(s) 145, 278, 555, 787
BspANI GGCC 2 cut(s) 408, 566
BspCNI CTCAG 3 cut(s) 207, 898, 1367
BspLI GGNNCC 4 cut(s) 235, 508, 541, 1104
BspMAI CTGCAG 1 cut(s) 1006
BspPI GGATC 4 cut(s) 41, 112, 1024, 1155
BspQI GCTCTTC 2 cut(s) 257, 468
BspT107I GGYRCC 1 cut(s) 233
BspTI CTTAAG 1 cut(s) 1108
BsrDI GCAATG 2 cut(s) 436, 1211
BsrI ACTGG 6 cut(s) 394, 712, 772, 790, 839, 1177
BssECI CCNNGG 2 cut(s) 138, 305
BssMI GATC 4 cut(s) 33, 104, 1016, 1147
BssT1I CCWWGG 2 cut(s) 138, 305
Bst2UI CCWGG 1 cut(s) 1126
Bst4CI ACNGT 3 cut(s) 400, 1321, 1339
Bst6I CTCTTC 2 cut(s) 257, 468
BstAFI CTTAAG 1 cut(s) 1108
BstAPI GCANNNNNTGC 3 cut(s) 458, 755, 1010
BstC8I GCNNGC 3 cut(s) 243, 326, 1282
BstDEI CTNAG 3 cut(s) 194, 906, 1354
BstDSI CCRYGG 1 cut(s) 138
BstENI CCTNNNNNAGG 1 cut(s) 575
BstF5I GGATG 2 cut(s) 1225, 1349
BstKTI GATC 4 cut(s) 36, 107, 1019, 1150
BstMBI GATC 4 cut(s) 33, 104, 1016, 1147
BstMWI GCNNNNNNNGC 6 cut(s) 247, 278, 458, 637, 755, 1010
BstNI CCWGG 1 cut(s) 1126
BstNSI RCATGY 3 cut(s) 426, 652, 1013
BstSCI CCNGG 1 cut(s) 1124
BstSFI CTRYAG 1 cut(s) 1002
BstSLI GKGCMC 1 cut(s) 1328
BstV1I GCAGC 8 cut(s) 143, 612, 615, 639, 741, 919, 988, 1264
BstV2I GAAGAC 1 cut(s) 307
BstX2I RGATCY 1 cut(s) 1147
BstXI CCANNNNNNTGG 1 cut(s) 1099
BstYI RGATCY 1 cut(s) 1147
Bsu36I CCTNAGG 1 cut(s) 1354
BsuRI GGCC 2 cut(s) 408, 566
BtgI CCRYGG 1 cut(s) 138
BtrI CACGTC 1 cut(s) 484
BtsCI GGATG 2 cut(s) 1225, 1349
BtsI GCAGTG 1 cut(s) 89
BtsIMutI CAGTG 4 cut(s) 89, 366, 387, 846
Cac8I GCNNGC 3 cut(s) 243, 326, 1282
Cfr13I GGNCC 4 cut(s) 142, 392, 540, 1102
CseI GACGC 1 cut(s) 663
Csp6I GTAC 2 cut(s) 493, 1340
CviAII CATG 7 cut(s) 127, 139, 423, 649, 1010, 1093, 1306
CviQI GTAC 2 cut(s) 493, 1340
DdeI CTNAG 3 cut(s) 194, 906, 1354
DpnI GATC 4 cut(s) 35, 106, 1018, 1149
DpnII GATC 4 cut(s) 33, 104, 1016, 1147
EaeI YGGCCR 1 cut(s) 564
Eam1104I CTCTTC 2 cut(s) 257, 468
EarI CTCTTC 2 cut(s) 257, 468
Eco130I CCWWGG 2 cut(s) 138, 305
Eco147I AGGCCT 1 cut(s) 408
Eco47I GGWCC 4 cut(s) 142, 392, 540, 1102
Eco81I CCTNAGG 1 cut(s) 1354
EcoNI CCTNNNNNAGG 1 cut(s) 575
EcoO109I RGGNCCY 1 cut(s) 540
EcoRI GAATTC 1 cut(s) 613
EcoRII CCWGG 1 cut(s) 1124
EcoT14I CCWWGG 2 cut(s) 138, 305
ErhI CCWWGG 2 cut(s) 138, 305
FaeI CATG 7 cut(s) 130, 142, 426, 652, 1013, 1096, 1309
FaqI GGGAC 2 cut(s) 553, 1088
FatI CATG 7 cut(s) 126, 138, 422, 648, 1009, 1092, 1305
FauI CCCGC 1 cut(s) 548
FauNDI CATATG 1 cut(s) 751
Fnu4HI GCNGC 9 cut(s) 132, 279, 626, 629, 653, 730, 933, 1002, 1278
FokI GGATG 2 cut(s) 1232, 1336
Fsp4HI GCNGC 9 cut(s) 132, 279, 626, 629, 653, 730, 933, 1002, 1278
FspBI CTAG 1 cut(s) 720
GluI GCNGC 9 cut(s) 132, 279, 626, 629, 653, 730, 933, 1002, 1278
GsaI CCCAGC 2 cut(s) 539, 635
GsuI CTGGAG 1 cut(s) 695
HaeIII GGCC 2 cut(s) 408, 566
HgaI GACGC 1 cut(s) 663
Hin1II CATG 7 cut(s) 130, 142, 426, 652, 1013, 1096, 1309
HincII GTYRAC 1 cut(s) 1294
HindII GTYRAC 1 cut(s) 1294
HindIII AAGCTT 1 cut(s) 239
HinfI GANTC 4 cut(s) 8, 333, 800, 1359
HphI GGTGA 2 cut(s) 328, 499
Hpy166II GTNNAC 1 cut(s) 1294
Hpy188I TCNGA 5 cut(s) 157, 197, 668, 907, 1239
Hpy188III TCNNGA 5 cut(s) 108, 720, 1036, 1151, 1356
Hpy8I GTNNAC 1 cut(s) 1294
Hpy99I CGWCG 2 cut(s) 485, 679
HpyAV CCTTC 3 cut(s) 419, 973, 1216
HpyCH4III ACNGT 3 cut(s) 400, 1321, 1339
HpyCH4IV ACGT 2 cut(s) 352, 483
HpyCH4V TGCA 9 cut(s) 217, 272, 419, 434, 860, 935, 1004, 1079, 1216
HpyF10VI GCNNNNNNNGC 6 cut(s) 247, 278, 458, 637, 755, 1010
HpyF3I CTNAG 3 cut(s) 194, 906, 1354
HpySE526I ACGT 2 cut(s) 352, 483
Hsp92II CATG 7 cut(s) 130, 142, 426, 652, 1013, 1096, 1309
Kzo9I GATC 4 cut(s) 33, 104, 1016, 1147
LguI GCTCTTC 2 cut(s) 257, 468
LmnI GCTCC 1 cut(s) 79
Lsp1109I GCAGC 8 cut(s) 143, 612, 615, 639, 741, 919, 988, 1264
LweI GCATC 2 cut(s) 944, 1088
MaeI CTAG 1 cut(s) 720
MaeII ACGT 2 cut(s) 352, 483
MaeIII GTNAC 1 cut(s) 958
MalI GATC 4 cut(s) 35, 106, 1018, 1149
MboI GATC 4 cut(s) 33, 104, 1016, 1147
MfeI CAATTG 2 cut(s) 273, 924
MflI RGATCY 1 cut(s) 1147
MhlI GDGCHC 1 cut(s) 1328
MlsI TGGCCA 1 cut(s) 566
MluNI TGGCCA 1 cut(s) 566
MlyI GAGTC 2 cut(s) 327, 1368
MmeI TCCRAC 5 cut(s) 180, 382, 419, 543, 1026
Mox20I TGGCCA 1 cut(s) 566
MscI TGGCCA 1 cut(s) 566
MseI TTAA 3 cut(s) 99, 414, 1109
MslI CAYNNNNRTG 3 cut(s) 737, 956, 1097
Msp20I TGGCCA 1 cut(s) 566
MspCI CTTAAG 1 cut(s) 1108
MspR9I CCNGG 1 cut(s) 1126
MunI CAATTG 2 cut(s) 273, 924
Mva1269I GAATGC 2 cut(s) 860, 1003
MvaI CCWGG 1 cut(s) 1126
MwoI GCNNNNNNNGC 6 cut(s) 247, 278, 458, 637, 755, 1010
NcoI CCATGG 1 cut(s) 138
NdeI CATATG 1 cut(s) 751
NdeII GATC 4 cut(s) 33, 104, 1016, 1147
NlaIII CATG 7 cut(s) 130, 142, 426, 652, 1013, 1096, 1309
NlaIV GGNNCC 4 cut(s) 235, 508, 541, 1104
NmuCI GTSAC 1 cut(s) 958
NspI RCATGY 3 cut(s) 426, 652, 1013
PceI AGGCCT 1 cut(s) 408
PciI ACATGT 1 cut(s) 422
PciSI GCTCTTC 2 cut(s) 257, 468
PctI GAATGC 2 cut(s) 860, 1003
PfeI GAWTC 2 cut(s) 8, 800
PflMI CCANNNNNTGG 1 cut(s) 401
PkrI GCNGC 9 cut(s) 133, 280, 627, 630, 654, 731, 934, 1003, 1279
PleI GAGTC 2 cut(s) 327, 1367
PpsI GAGTC 2 cut(s) 327, 1367
PpuMI RGGWCCY 1 cut(s) 540
PscI ACATGT 1 cut(s) 422
PshBI ATTAAT 1 cut(s) 99
PsiI TTATAA 1 cut(s) 51
Psp5II RGGWCCY 1 cut(s) 540
Psp6I CCWGG 1 cut(s) 1124
PspFI CCCAGC 2 cut(s) 535, 631
PspGI CCWGG 1 cut(s) 1124
PspN4I GGNNCC 4 cut(s) 235, 508, 541, 1104
PspPI GGNCC 4 cut(s) 142, 392, 540, 1102
PspPPI RGGWCCY 1 cut(s) 540
PstI CTGCAG 1 cut(s) 1006
PsuI RGATCY 1 cut(s) 1147
RsaI GTAC 2 cut(s) 494, 1341
RsaNI GTAC 2 cut(s) 493, 1340
RseI CAYNNNNRTG 3 cut(s) 737, 956, 1097
SapI GCTCTTC 2 cut(s) 257, 468
SaqAI TTAA 3 cut(s) 99, 414, 1109
SatI GCNGC 9 cut(s) 132, 279, 626, 629, 653, 730, 933, 1002, 1278
Sau3AI GATC 4 cut(s) 33, 104, 1016, 1147
Sau96I GGNCC 4 cut(s) 142, 392, 540, 1102
ScaI AGTACT 1 cut(s) 494
SchI GAGTC 2 cut(s) 327, 1368
ScrFI CCNGG 1 cut(s) 1126
SduI GDGCHC 1 cut(s) 1328
SfaNI GCATC 2 cut(s) 944, 1088
SfcI CTRYAG 1 cut(s) 1002
SinI GGWCC 4 cut(s) 142, 392, 540, 1102
SmiMI CAYNNNNRTG 3 cut(s) 737, 956, 1097
SmlI CTYRAG 2 cut(s) 1034, 1108
SmoI CTYRAG 2 cut(s) 1034, 1108
SseBI AGGCCT 1 cut(s) 408
SsiI CCGC 4 cut(s) 145, 278, 555, 787
SspI AATATT 1 cut(s) 97
SspMI CTAG 1 cut(s) 720
StuI AGGCCT 1 cut(s) 408
StyD4I CCNGG 1 cut(s) 1124
StyI CCWWGG 2 cut(s) 138, 305
TaaI ACNGT 3 cut(s) 400, 1321, 1339
TaiI ACGT 2 cut(s) 355, 486
TaqI TCGA 1 cut(s) 480
TatI WGTACW 2 cut(s) 492, 1339
TauI GCSGC 1 cut(s) 281
TfiI GAWTC 2 cut(s) 8, 800
Tru1I TTAA 3 cut(s) 99, 414, 1109
Tru9I TTAA 3 cut(s) 99, 414, 1109
TscAI CASTG 4 cut(s) 89, 373, 394, 846
TseFI GTSAC 1 cut(s) 958
TseI GCWGC 8 cut(s) 131, 625, 628, 652, 729, 932, 1001, 1277
Tsp45I GTSAC 1 cut(s) 958
TspDTI ATGAA 5 cut(s) 831, 837, 955, 1322, 1326
TspRI CASTG 4 cut(s) 89, 373, 394, 846
Van91I CCANNNNNTGG 1 cut(s) 401
Vha464I CTTAAG 1 cut(s) 1108
VpaK11BI GGWCC 4 cut(s) 142, 392, 540, 1102
VspI ATTAAT 1 cut(s) 99
XagI CCTNNNNNAGG 1 cut(s) 575
XapI RAATTY 4 cut(s) 613, 940, 1086, 1299
XbaI TCTAGA 1 cut(s) 719
XceI RCATGY 3 cut(s) 426, 652, 1013
XspI CTAG 1 cut(s) 720
ZrmI AGTACT 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.