Prupe.6G276800_v2.0.a1

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
26038893 .. 26042376
3484 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G276800.2

Sequence Viewer

Length: 1350 bp
ATGGCTTCAAACCAAGACCAGCCATGGCTATTAGAAAATGGCAACCTCAAGGGCTTAACTAAGGAGAACCGGACCGGTCGGACCGCACACAACATGTCATCCTCTTCCCTGCGGAAGAAGTCTGACCTCACCCTTGTCTCCAAAGTTCGATGCTCTCTCCTTAGACAGTTTTTGGCGAATTTGCAGGAGGTTACATTGGGGACAAAACTCTCCGTCTTGTTCCCAGCCATACCACTGGCCATTTTGGCTCAGTGTTTTGGTTTTGCAAGTCCATGGGTGTTTGCGTTGAGCTTAATTGGGCTTATGCCACTAGCAGAACGGGTCAGCTTTCTGACAGAGCAAATTTCTTTTTACACCGGTCCAACAGTGGGAGGGCTTCTAAATGCGACATGTGGAAATGCCACGGAGCTAATTATTGCAATCTTTGCCCTGGCTCAACATAAGGTAGCAGTAGTGAAGTACTCTCTGCTGGGGTCCATTCTCTCAAACCTTCTCTTAGTCCTCGGCACTTCTCTCTTTTGCGGTGGCATTGCCAACATCAGAAAAGAACAGAAATATGACAGAAGACAAGCGGATGTGAACTCCCTCATGCTGCTGCTGGCACTTTTGTGTCACTTGCTGCCAATGCTGTTCACGTTTGCTGCAGGAGCCTCTGCTAGTGTGACATCAGACCCTTCCCTCCATTTGTCCAGAGCCAGCTGCATTGTTATGCTCATAGCTTATACTGCATACATTGTCTTCCAGTTGTGGACACACCGTGAATTATTTGAAGCTCAGGAGGAATCGGACGATGATGGTGTTGTTTCGGATGAAGCACCTGTGATTGGATTCTGGAGTGGGATTGTGTGGCTGATTGGAATGACTGCAGTGATTGCCTTGTTGTCTGAGTATGTTGTGGGAACAATTGAGGAAGCATCAGATTCTTGGGGCTTGTCTGTGAGCTTCATCAGCATAATCTTGCTACCTATTGTTGGCAATGCAGCAGAACATGCAGGAGCAATCATATTCGCTTTCAAGAACAAGTTGGATATAACGTTGGGTGTTGCTTTGGGATCTGCAACTCAAATTGCCGTGTTTGTGGTTCCATTGTGCGTGATTATTGCTTGGATAATGGGGATTAACATGGATCTCAATTTCAGTGTCATTGAGACCGGCTCTTTAGCTATATCAATTCTTGCTGTAGCCTTCACTTTACAGGATGGTACTTCCCATTACCTCAAGGGATTGGTTCTTCTGCTGTGCTACATTATTATTGGAGCCTGCTTTTTTGTAACCGAATCTCCCCTTCATCACTCGAACATCGTCAACCCGGGACTTAAATCGTCAAACACAGCAGTTTTTGGAGCTTAA

Protein Analysis

450

Amino Acids

48.23

Weight (kDa)

5.85

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 84, 112, 522, 572
AclI AACGTT 1 cut(s) 1034
AclWI GGATC 2 cut(s) 1060, 1134
AcoI YGGCCR 1 cut(s) 237
AcsI RAATTY 2 cut(s) 178, 342
AdeI CACNNNGTG 1 cut(s) 758
AfaI GTAC 2 cut(s) 461, 1204
AfiI CCNNNNNNNGG 3 cut(s) 368, 824, 971
AflIII ACRYGT 2 cut(s) 93, 389
AgeI ACCGGT 2 cut(s) 74, 356
AgsI TTSAA 3 cut(s) 9, 770, 1015
AjnI CCWGG 1 cut(s) 429
AleI CACNNNNGTG 1 cut(s) 607
AluBI AGCT 9 cut(s) 291, 327, 409, 699, 719, 773, 942, 1163, 1346
AluI AGCT 9 cut(s) 291, 327, 409, 699, 719, 773, 942, 1163, 1346
Alw26I GTCTC 2 cut(s) 142, 1142
AlwI GGATC 2 cut(s) 1060, 1134
Ama87I CYCGRG 1 cut(s) 1309
AoxI GGCC 1 cut(s) 237
ApeKI GCWGC 6 cut(s) 592, 595, 619, 641, 699, 980
ApoI RAATTY 2 cut(s) 178, 342
AsiGI ACCGGT 2 cut(s) 74, 356
AspS9I GGNCC 4 cut(s) 72, 81, 359, 474
AsuC2I CCSGG 2 cut(s) 1310, 1311
AsuHPI GGTGA 1 cut(s) 121
AvaI CYCGRG 1 cut(s) 1309
AvaII GGWCC 4 cut(s) 72, 81, 359, 474
BalI TGGCCA 1 cut(s) 239
BbsI GAAGAC 2 cut(s) 571, 730
BbvI GCAGC 6 cut(s) 579, 582, 606, 628, 686, 992
BccI CCATC 2 cut(s) 788, 1193
BceAI ACGGC 1 cut(s) 1055
BciT130I CCWGG 1 cut(s) 431
BcnI CCSGG 2 cut(s) 1310, 1311
BcoDI GTCTC 2 cut(s) 142, 1142
BfaI CTAG 2 cut(s) 311, 657
BfmI CTRYAG 3 cut(s) 642, 864, 1179
BglI GCCNNNNNGGC 1 cut(s) 245
BisI GCNGC 6 cut(s) 593, 596, 620, 642, 700, 981
BlsI GCNGC 6 cut(s) 594, 597, 621, 643, 701, 982
BmcAI AGTACT 1 cut(s) 461
Bme1390I CCNGG 3 cut(s) 431, 1310, 1311
Bme18I GGWCC 4 cut(s) 72, 81, 359, 474
BmeT110I CYCGRG 1 cut(s) 1309
BmgT120I GGNCC 4 cut(s) 72, 81, 359, 474
BmiI GGNNCC 4 cut(s) 475, 649, 1083, 1258
BmrFI CCNGG 3 cut(s) 431, 1310, 1311
BmsI GCATC 2 cut(s) 140, 923
BpiI GAAGAC 2 cut(s) 571, 730
BplI GAGNNNNNCTC 2 cut(s) 1139, 1171
BpmI CTGGAG 1 cut(s) 853
Bpu10I CCTNAGC 1 cut(s) 774
BpuEI CTTGAG 2 cut(s) 32, 1202
BpuMI CCSGG 2 cut(s) 1310, 1311
BsaI GGTCTC 1 cut(s) 1142
BsaJI CCNNGG 6 cut(s) 23, 272, 402, 429, 502, 1309
BsaWI WCCGGW 3 cut(s) 69, 74, 356
BsaXI ACNNNNNCTCC 2 cut(s) 1264, 1294
Bsc4I CCNNNNNNNGG 3 cut(s) 368, 824, 971
Bse118I RCCGGY 3 cut(s) 74, 356, 1151
Bse1I ACTGG 2 cut(s) 240, 742
Bse3DI GCAATG 2 cut(s) 528, 982
BseBI CCWGG 1 cut(s) 431
BseDI CCNNGG 6 cut(s) 23, 272, 402, 429, 502, 1309
BseGI GGATG 4 cut(s) 98, 580, 814, 1204
BseLI CCNNNNNNNGG 3 cut(s) 368, 824, 971
BseMI GCAATG 2 cut(s) 528, 982
BseMII CTCAG 3 cut(s) 263, 788, 876
BseNI ACTGG 2 cut(s) 240, 742
BseXI GCAGC 6 cut(s) 579, 582, 606, 628, 686, 992
BseYI CCCAGC 2 cut(s) 223, 469
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 1 cut(s) 239
BshTI ACCGGT 2 cut(s) 74, 356
BsiEI CGRYCG 1 cut(s) 79
BsiHKCI CYCGRG 1 cut(s) 1309
BsiSI CCGG 5 cut(s) 70, 75, 357, 1152, 1310
BslFI GGGAC 2 cut(s) 214, 1326
BslI CCNNNNNNNGG 3 cut(s) 368, 824, 971
BsmAI GTCTC 2 cut(s) 142, 1142
BsmFI GGGAC 2 cut(s) 214, 1326
BsnI GGCC 1 cut(s) 239
Bso31I GGTCTC 1 cut(s) 1142
BsoBI CYCGRG 1 cut(s) 1309
Bsp143I GATC 2 cut(s) 1052, 1126
Bsp19I CCATGG 2 cut(s) 23, 272
BspACI CCGC 4 cut(s) 84, 112, 522, 572
BspANI GGCC 1 cut(s) 239
BspCNI CTCAG 3 cut(s) 262, 787, 877
BspLI GGNNCC 4 cut(s) 475, 649, 1083, 1258
BspMAI CTGCAG 2 cut(s) 646, 868
BspPI GGATC 2 cut(s) 1060, 1134
BspTNI GGTCTC 1 cut(s) 1142
BsrDI GCAATG 2 cut(s) 528, 982
BsrFI RCCGGY 3 cut(s) 74, 356, 1151
BsrI ACTGG 2 cut(s) 240, 742
BssAI RCCGGY 3 cut(s) 74, 356, 1151
BssECI CCNNGG 6 cut(s) 23, 272, 402, 429, 502, 1309
BssMI GATC 2 cut(s) 1052, 1126
BssT1I CCWWGG 2 cut(s) 23, 272
Bst2UI CCWGG 1 cut(s) 431
Bst4CI ACNGT 3 cut(s) 168, 367, 758
Bst6I CTCTTC 1 cut(s) 109
BstAPI GCANNNNNTGC 3 cut(s) 425, 872, 989
BstC8I GCNNGC 3 cut(s) 600, 697, 1261
BstDEI CTNAG 6 cut(s) 60, 161, 249, 496, 774, 885
BstDSI CCRYGG 3 cut(s) 23, 272, 402
BstF5I GGATG 4 cut(s) 98, 580, 814, 1204
BstKTI GATC 2 cut(s) 1055, 1129
BstMAI GTCTC 2 cut(s) 142, 1142
BstMBI GATC 2 cut(s) 1052, 1126
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 8 cut(s) 245, 425, 625, 647, 725, 872, 948, 989
BstNI CCWGG 1 cut(s) 431
BstNSI RCATGY 3 cut(s) 97, 393, 992
BstSCI CCNGG 3 cut(s) 429, 1308, 1309
BstSFI CTRYAG 3 cut(s) 642, 864, 1179
BstV1I GCAGC 6 cut(s) 579, 582, 606, 628, 686, 992
BstV2I GAAGAC 2 cut(s) 571, 730
BstX2I RGATCY 2 cut(s) 1052, 1126
BstXI CCANNNNNNTGG 1 cut(s) 235
BstYI RGATCY 2 cut(s) 1052, 1126
BsuRI GGCC 1 cut(s) 239
BtgI CCRYGG 3 cut(s) 23, 272, 402
BtsCI GGATG 4 cut(s) 98, 580, 814, 1204
BtsI GCAGTG 1 cut(s) 873
BtsIMutI CAGTG 5 cut(s) 233, 257, 372, 873, 1144
Cac8I GCNNGC 3 cut(s) 600, 697, 1261
Cfr10I RCCGGY 3 cut(s) 74, 356, 1151
Cfr13I GGNCC 4 cut(s) 72, 81, 359, 474
Cfr9I CCCGGG 1 cut(s) 1309
CpoI CGGWCCG 2 cut(s) 72, 81
Csp6I GTAC 2 cut(s) 460, 1203
CspAI ACCGGT 2 cut(s) 74, 356
CspI CGGWCCG 2 cut(s) 72, 81
CviAII CATG 7 cut(s) 24, 94, 273, 390, 589, 989, 1123
CviQI GTAC 2 cut(s) 460, 1203
DdeI CTNAG 6 cut(s) 60, 161, 249, 496, 774, 885
DpnI GATC 2 cut(s) 1054, 1128
DpnII GATC 2 cut(s) 1052, 1126
DraIII CACNNNGTG 1 cut(s) 758
EaeI YGGCCR 1 cut(s) 237
Eam1104I CTCTTC 1 cut(s) 109
EarI CTCTTC 1 cut(s) 109
Eco130I CCWWGG 2 cut(s) 23, 272
Eco31I GGTCTC 1 cut(s) 1142
Eco47I GGWCC 4 cut(s) 72, 81, 359, 474
Eco88I CYCGRG 1 cut(s) 1309
EcoRII CCWGG 1 cut(s) 429
EcoT14I CCWWGG 2 cut(s) 23, 272
ErhI CCWWGG 2 cut(s) 23, 272
FaeI CATG 7 cut(s) 27, 97, 276, 393, 592, 992, 1126
FaqI GGGAC 2 cut(s) 214, 1326
FatI CATG 7 cut(s) 23, 93, 272, 389, 588, 988, 1122
Fnu4HI GCNGC 6 cut(s) 593, 596, 620, 642, 700, 981
FokI GGATG 4 cut(s) 85, 587, 821, 1211
Fsp4HI GCNGC 6 cut(s) 593, 596, 620, 642, 700, 981
FspBI CTAG 2 cut(s) 311, 657
GluI GCNGC 6 cut(s) 593, 596, 620, 642, 700, 981
GsaI CCCAGC 2 cut(s) 227, 473
GsuI CTGGAG 1 cut(s) 853
HaeIII GGCC 1 cut(s) 239
HapII CCGG 5 cut(s) 70, 75, 357, 1152, 1310
Hin1II CATG 7 cut(s) 27, 97, 276, 393, 592, 992, 1126
HincII GTYRAC 1 cut(s) 1306
HindII GTYRAC 1 cut(s) 1306
HinfI GANTC 4 cut(s) 782, 828, 920, 1277
HpaII CCGG 5 cut(s) 70, 75, 357, 1152, 1310
HphI GGTGA 1 cut(s) 121
Hpy166II GTNNAC 4 cut(s) 580, 633, 750, 1306
Hpy188I TCNGA 9 cut(s) 81, 124, 333, 542, 670, 787, 808, 886, 919
Hpy188III TCNNGA 4 cut(s) 690, 776, 832, 1015
Hpy8I GTNNAC 4 cut(s) 580, 633, 750, 1306
HpyAV CCTTC 4 cut(s) 500, 684, 1195, 1295
HpyCH4III ACNGT 3 cut(s) 168, 367, 758
HpyCH4IV ACGT 2 cut(s) 635, 1034
HpyF10VI GCNNNNNNNGC 8 cut(s) 245, 425, 625, 647, 725, 872, 948, 989
HpyF3I CTNAG 6 cut(s) 60, 161, 249, 496, 774, 885
HpySE526I ACGT 2 cut(s) 635, 1034
Hsp92II CATG 7 cut(s) 27, 97, 276, 393, 592, 992, 1126
Kzo9I GATC 2 cut(s) 1052, 1126
LmnI GCTCC 5 cut(s) 406, 647, 995, 1256, 1343
Lsp1109I GCAGC 6 cut(s) 579, 582, 606, 628, 686, 992
LweI GCATC 2 cut(s) 140, 923
MaeI CTAG 2 cut(s) 311, 657
MaeII ACGT 2 cut(s) 635, 1034
MaeIII GTNAC 4 cut(s) 190, 611, 661, 1270
MalI GATC 2 cut(s) 1054, 1128
MboI GATC 2 cut(s) 1052, 1126
MboII GAAGA 5 cut(s) 96, 127, 576, 730, 1223
MfeI CAATTG 1 cut(s) 903
MflI RGATCY 2 cut(s) 1052, 1126
MlsI TGGCCA 1 cut(s) 239
MluCI AATT 9 cut(s) 178, 294, 342, 411, 761, 903, 1065, 1132, 1170
MluNI TGGCCA 1 cut(s) 239
MmeI TCCRAC 3 cut(s) 59, 386, 1005
Mox20I TGGCCA 1 cut(s) 239
MscI TGGCCA 1 cut(s) 239
MseI TTAA 5 cut(s) 56, 293, 1119, 1317, 1348
MslI CAYNNNNRTG 2 cut(s) 607, 707
Msp20I TGGCCA 1 cut(s) 239
MspA1I CMGCKG 1 cut(s) 699
MspI CCGG 5 cut(s) 70, 75, 357, 1152, 1310
MspR9I CCNGG 3 cut(s) 431, 1310, 1311
MunI CAATTG 1 cut(s) 903
MvaI CCWGG 1 cut(s) 431
MwoI GCNNNNNNNGC 8 cut(s) 245, 425, 625, 647, 725, 872, 948, 989
NciI CCSGG 2 cut(s) 1310, 1311
NcoI CCATGG 2 cut(s) 23, 272
NdeII GATC 2 cut(s) 1052, 1126
NlaIII CATG 7 cut(s) 27, 97, 276, 393, 592, 992, 1126
NlaIV GGNNCC 4 cut(s) 475, 649, 1083, 1258
NmeAIII GCCGAG 1 cut(s) 483
NmuCI GTSAC 2 cut(s) 611, 661
NspI RCATGY 3 cut(s) 97, 393, 992
OliI CACNNNNGTG 1 cut(s) 607
PciI ACATGT 2 cut(s) 93, 389
PfeI GAWTC 4 cut(s) 782, 828, 920, 1277
PinAI ACCGGT 2 cut(s) 74, 356
PkrI GCNGC 6 cut(s) 594, 597, 621, 643, 701, 982
PscI ACATGT 2 cut(s) 93, 389
Psp1406I AACGTT 1 cut(s) 1034
Psp6I CCWGG 1 cut(s) 429
PspFI CCCAGC 2 cut(s) 223, 469
PspGI CCWGG 1 cut(s) 429
PspN4I GGNNCC 4 cut(s) 475, 649, 1083, 1258
PspPI GGNCC 4 cut(s) 72, 81, 359, 474
PstI CTGCAG 2 cut(s) 646, 868
PsuI RGATCY 2 cut(s) 1052, 1126
PvuII CAGCTG 1 cut(s) 699
RsaI GTAC 2 cut(s) 461, 1204
RsaNI GTAC 2 cut(s) 460, 1203
RseI CAYNNNNRTG 2 cut(s) 607, 707
Rsr2I CGGWCCG 2 cut(s) 72, 81
RsrII CGGWCCG 2 cut(s) 72, 81
SaqAI TTAA 5 cut(s) 56, 293, 1119, 1317, 1348
SatI GCNGC 6 cut(s) 593, 596, 620, 642, 700, 981
Sau3AI GATC 2 cut(s) 1052, 1126
Sau96I GGNCC 4 cut(s) 72, 81, 359, 474
ScaI AGTACT 1 cut(s) 461
ScrFI CCNGG 3 cut(s) 431, 1310, 1311
SfaNI GCATC 2 cut(s) 140, 923
SfcI CTRYAG 3 cut(s) 642, 864, 1179
SinI GGWCC 4 cut(s) 72, 81, 359, 474
SmaI CCCGGG 1 cut(s) 1311
SmiMI CAYNNNNRTG 2 cut(s) 607, 707
SmlI CTYRAG 2 cut(s) 47, 1217
SmoI CTYRAG 2 cut(s) 47, 1217
Sse9I AATT 9 cut(s) 178, 294, 342, 411, 761, 903, 1065, 1132, 1170
SsiI CCGC 4 cut(s) 84, 112, 522, 572
SspMI CTAG 2 cut(s) 311, 657
StyD4I CCNGG 3 cut(s) 429, 1308, 1309
StyI CCWWGG 2 cut(s) 23, 272
TaaI ACNGT 3 cut(s) 168, 367, 758
TaiI ACGT 2 cut(s) 638, 1037
TaqI TCGA 2 cut(s) 148, 1295
TasI AATT 9 cut(s) 178, 294, 342, 411, 761, 903, 1065, 1132, 1170
TatI WGTACW 1 cut(s) 459
TfiI GAWTC 4 cut(s) 782, 828, 920, 1277
Tru1I TTAA 5 cut(s) 56, 293, 1119, 1317, 1348
Tru9I TTAA 5 cut(s) 56, 293, 1119, 1317, 1348
TscAI CASTG 5 cut(s) 240, 257, 372, 873, 1144
TseFI GTSAC 2 cut(s) 611, 661
TseI GCWGC 6 cut(s) 592, 595, 619, 641, 699, 980
Tsp45I GTSAC 2 cut(s) 611, 661
TspDTI ATGAA 3 cut(s) 825, 934, 1277
TspGWI ACGGA 2 cut(s) 202, 419
TspMI CCCGGG 1 cut(s) 1309
TspRI CASTG 5 cut(s) 240, 257, 372, 873, 1144
VpaK11BI GGWCC 4 cut(s) 72, 81, 359, 474
XapI RAATTY 2 cut(s) 178, 342
XceI RCATGY 3 cut(s) 97, 393, 992
XmaI CCCGGG 1 cut(s) 1309
XspI CTAG 2 cut(s) 311, 657
ZrmI AGTACT 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.