Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002917

Physical Location & Seq

Genomic Coordinates Forward (+)

9836051 .. 9839574

Gene Structure 3524 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G010220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGCTTCAAACCAAGAACCATGGCTGTTGGAAAATGGCAACCCCAAAGGCCTAACTAAGGAGCACCGGAAGAGGTCCGCTCACAACAGGTCCTCCTCTTCACTGAGGAAGAAGTCTGATCGTACGCTCATCTCGAAAATTCCATGTTCACTTCTTAGACAATTCCTGGGCAATCTCCAGGAGGTTATTTTGGGTACCAAACTCTCGGTTCTATTCCCGGCCATCCCGGCAGCCATTTTGGCCGACTCTTTTGGCTTTGGAAGACCTTGGGTCTTCGCTCTGAGCCTCATTGGACTAATGCCACTAGCAGAACGAGTTAGTTTCCTCACAGAACAGATTGCTTTTTTCACCGGTCCAACAGTGGGAGGGCTTCTTAACGCGACATGTGGCAACGCCACCGAGCTGATTATAGCTATCTTTGCTCTGAGCCAACACAAAATCACAGTAGTGAAGTACTCCCTTTTGGGATCGATACTCTCCAACCTTCTGTTGGTCCTCGGCACCTCCCTCTTCTGCGGTGGCATTGCTAACCTCAGAAGGGAACAAAAATATGACAGAAGACAAGCTGACGTGAACTCATTGATGCTGCTGCTGGCGCTGCTGTGTCACTTGCTGCCACTGCTCTTCACTTTCGCCGCAGGAGAGTCCGTTGCTACCGCAGACCCCACGCTCCATCTGTCGAGAGCTAGCAGCATTATCATGCTGATTGCTTACGCTGCCTACATTGTCTTCCAGCTCTGGACTCACCGCGAGTTATTTGAAGCTCAGGAATCGGATGATGATGATGCTGCCGAGGAAGAAGCGGCTGTAATTGGATTCTGGAGTGGTTTTGTGTGGCTGGTTGGAATGACTGGAGTCATAGCTTTGTTGTCTGAGTATATAGTGGGAACAATTGAGGAAGCATCCGATTCTTGGGGGTTGTCTGTGAGCTTCATCAGCATAATCCTGCTACCTATTGTTGGCAATGCAGCAGAACATGCAGGAGCTGTCATTTTTGCTTTCAAGAACAAGCTGGATATAACTCTTGGTGTTGCATTGGGTTCTGCAACTCAAATTGCCATGTTTGTGGTTCCATTTTGTGTCATTGTAGCTTGGATTATGGGTATTAACATGGATCTCAATTTCAGTCTCCTTGAGACTGGCTCTCTTGCTTTATCAATCCTAGCCACAGCCTTCACATTGCAGGATGGTACTTCTCACTACCTGAAAGGACTGATTCTTCTGCTGTGCTACATTATTATTGGAGCCTGTTTTTTTGTATCTCAAGCTCCACTTAATGGACCAAACAGTGTCAATCTGAGACTTAAAACTACAGCTGGATCAGTCTTTGGAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006793 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006882 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0015075 GO:0015077 GO:0015078 GO:0015085 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015368 GO:0015369 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030026 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0042592 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046916 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0050896 GO:0051139 GO:0051179 GO:0051234 GO:0051592 GO:0051704 GO:0051707 GO:0055062 GO:0055065 GO:0055069 GO:0055071 GO:0055074 GO:0055076 GO:0055080 GO:0055081 GO:0055082 GO:0055083 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0072503 GO:0072505 GO:0072506 GO:0072507 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099402 GO:0099516 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_Ca_ex

Protein Analysis

445

Amino Acids

47.99

Weight (kDa)

6.08

Isoelectric Point (pI)

35.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_Ca_ex	PF01699	90 - 247	1.8e-23	Sodium/calcium exchanger protein
Na_Ca_ex	PF01699	276 - 414	2.6e-18	Sodium/calcium exchanger protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38170 AT2G38170 AT2G38170 AT3G51860 AT3G51860
fragaria_vesca	FvH4_3g38530 FvH4_6g11493
malus_domestica	MD03G1070900.v1.1 MD04G1151600.v1.1 MD11G1074900.v1.1 MD12G1165800.v1.1
prunus_persica	Prupe.6G057700_v2.0.a1 Prupe.6G276800_v2.0.a1 Prupe.6G276800_v2.0.a1
pyrus_communis	pycom03g05720 pycom04g13770
rosa_chinensis	RchiOBHm_Chr3g0463191 RchiOBHm_Chr5g0069431
rosa_laevigata	RLG00000024804 RLG00000036052
rosa_multiflora	Rmu_sc0002658.1_g000024 Rmu_sc0022743.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011530 Rroxscaffold_6G00416820
rosa_rugosa	Rorug03G0062200.1 Rorug03G0062300 Rorug03G0062300 Rorug05G0397500
rosa_samantha	Rh3AG120400 Rh3BG124800 Rh3CG126900 Rh3DG125800 Rh5AG454800 Rh5BG473600 Rh5CG496100 Rh5DG485600
rosa_wichuraiana	Rw3G010220 Rw5G042420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	194
AccB1I	GGYRCC	2 cut(s)	194, 500
AccB7I	CCANNNNNTGG	1 cut(s)	1277
AccBSI	CCGCTC	1 cut(s)	80
AccII	CGCG	2 cut(s)	380, 750
AciI	CCGC	6 cut(s)	78, 516, 636, 657, 748, 803
AclWI	GGATC	3 cut(s)	475, 1122, 1327
AcoI	YGGCCR	2 cut(s)	219, 240
AcsI	RAATTY	1 cut(s)	138
AfaI	GTAC	4 cut(s)	124, 196, 455, 1192
AfiI	CCNNNNNNNGG	7 cut(s)	58, 362, 490, 538, 912, 959, 1277
AflIII	ACRYGT	1 cut(s)	383
AgeI	ACCGGT	1 cut(s)	350
AgsI	TTSAA	3 cut(s)	9, 761, 1003
AhdI	GACNNNNNGTC	1 cut(s)	269
AjiI	CACGTC	1 cut(s)	571
AjnI	CCWGG	2 cut(s)	165, 177
AleI	CACNNNNGTG	1 cut(s)	446
Alw21I	GWGCWC	1 cut(s)	66
Alw26I	GTCTC	3 cut(s)	1130, 1133, 1294
AlwI	GGATC	3 cut(s)	475, 1122, 1327
AlwNI	CAGNNNCTG	1 cut(s)	986
AoxI	GGCC	3 cut(s)	49, 219, 240
ApeKI	GCWGC	9 cut(s)	230, 586, 589, 598, 613, 690, 716, 788, 968
ApoI	RAATTY	1 cut(s)	138
AsiGI	ACCGGT	1 cut(s)	350
Asp718I	GGTACC	1 cut(s)	194
AspLEI	GCGC	1 cut(s)	598
AspS9I	GGNCC	5 cut(s)	75, 90, 353, 493, 1280
AsuC2I	CCSGG	2 cut(s)	218, 227
AsuHPI	GGTGA	2 cut(s)	340, 737
AsuNHI	GCTAGC	1 cut(s)	686
AvaII	GGWCC	5 cut(s)	75, 90, 353, 493, 1280
BanI	GGYRCC	2 cut(s)	194, 500
BbsI	GAAGAC	4 cut(s)	265, 268, 565, 721
Bbv12I	GWGCWC	1 cut(s)	66
BbvI	GCAGC	9 cut(s)	242, 573, 576, 585, 600, 702, 703, 775, 980
BccI	CCATC	3 cut(s)	230, 681, 1181
BciT130I	CCWGG	2 cut(s)	167, 179
BcnI	CCSGG	2 cut(s)	218, 227
BcoDI	GTCTC	3 cut(s)	1130, 1133, 1294
BfaI	CTAG	3 cut(s)	305, 687, 1163
BfmI	CTRYAG	1 cut(s)	1311
BfoI	RGCGCY	1 cut(s)	599
BglI	GCCNNNNNGGC	2 cut(s)	227, 239
BmcAI	AGTACT	1 cut(s)	455
Bme1390I	CCNGG	4 cut(s)	167, 179, 218, 227
Bme18I	GGWCC	5 cut(s)	75, 90, 353, 493, 1280
BmeRI	GACNNNNNGTC	1 cut(s)	269
BmgBI	CACGTC	1 cut(s)	571
BmgT120I	GGNCC	5 cut(s)	75, 90, 353, 493, 1280
BmiI	GGNNCC	4 cut(s)	196, 502, 1071, 1246
BmrFI	CCNGG	4 cut(s)	167, 179, 218, 227
BmsI	GCATC	3 cut(s)	573, 775, 911
BmtI	GCTAGC	1 cut(s)	690
BoxI	GACNNNNGTC	1 cut(s)	854
BpiI	GAAGAC	4 cut(s)	265, 268, 565, 721
BplI	GAGNNNNNCTC	4 cut(s)	64, 96, 1127, 1159
BpmI	CTGGAG	3 cut(s)	161, 841, 873
Bpu10I	CCTNAGC	1 cut(s)	765
BpuEI	CTTGAG	2 cut(s)	1154, 1248
BpuMI	CCSGG	2 cut(s)	218, 227
Bsa29I	ATCGAT	1 cut(s)	470
BsaJI	CCNNGG	5 cut(s)	20, 166, 266, 496, 792
BsaWI	WCCGGW	2 cut(s)	66, 350
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 633, 663
Bsc4I	CCNNNNNNNGG	7 cut(s)	58, 362, 490, 538, 912, 959, 1277
Bse118I	RCCGGY	1 cut(s)	350
Bse1I	ACTGG	2 cut(s)	856, 1144
Bse3DI	GCAATG	3 cut(s)	522, 970, 1178
BseBI	CCWGG	2 cut(s)	167, 179
BseCI	ATCGAT	1 cut(s)	470
BseDI	CCNNGG	5 cut(s)	20, 166, 266, 496, 792
BseGI	GGATG	4 cut(s)	222, 781, 902, 1192
BseLI	CCNNNNNNNGG	7 cut(s)	58, 362, 490, 538, 912, 959, 1277
BseMI	GCAATG	3 cut(s)	522, 970, 1178
BseMII	CTCAG	7 cut(s)	95, 272, 416, 547, 779, 864, 1289
BseNI	ACTGG	2 cut(s)	856, 1144
BseRI	GAGGAG	1 cut(s)	85
BseXI	GCAGC	9 cut(s)	242, 573, 576, 585, 600, 702, 703, 775, 980
Bsh1236I	CGCG	2 cut(s)	380, 750
BshFI	GGCC	3 cut(s)	51, 221, 242
BshNI	GGYRCC	2 cut(s)	194, 500
BshTI	ACCGGT	1 cut(s)	350
BshVI	ATCGAT	1 cut(s)	470
BsiHKAI	GWGCWC	1 cut(s)	66
BsiSI	CCGG	4 cut(s)	67, 218, 227, 351
BsiWI	CGTACG	1 cut(s)	122
BslI	CCNNNNNNNGG	7 cut(s)	58, 362, 490, 538, 912, 959, 1277
BsmAI	GTCTC	3 cut(s)	1130, 1133, 1294
BsnI	GGCC	3 cut(s)	51, 221, 242
Bsp1286I	GDGCHC	1 cut(s)	66
Bsp143I	GATC	4 cut(s)	118, 467, 1114, 1319
Bsp19I	CCATGG	1 cut(s)	20
BspACI	CCGC	6 cut(s)	78, 516, 636, 657, 748, 803
BspANI	GGCC	3 cut(s)	51, 221, 242
BspCNI	CTCAG	7 cut(s)	96, 273, 417, 546, 778, 865, 1290
BspDI	ATCGAT	1 cut(s)	470
BspFNI	CGCG	2 cut(s)	380, 750
BspLI	GGNNCC	4 cut(s)	196, 502, 1071, 1246
BspOI	GCTAGC	1 cut(s)	690
BspPI	GGATC	3 cut(s)	475, 1122, 1327
BspQI	GCTCTTC	1 cut(s)	629
BspT107I	GGYRCC	2 cut(s)	194, 500
BsrBI	CCGCTC	1 cut(s)	80
BsrDI	GCAATG	3 cut(s)	522, 970, 1178
BsrFI	RCCGGY	1 cut(s)	350
BsrI	ACTGG	2 cut(s)	856, 1144
BssAI	RCCGGY	1 cut(s)	350
BssECI	CCNNGG	5 cut(s)	20, 166, 266, 496, 792
BssMI	GATC	4 cut(s)	118, 467, 1114, 1319
BssT1I	CCWWGG	2 cut(s)	20, 266
Bst2UI	CCWGG	2 cut(s)	167, 179
Bst4CI	ACNGT	3 cut(s)	361, 445, 1289
Bst6I	CTCTTC	4 cut(s)	65, 103, 515, 629
BstAPI	GCANNNNNTGC	1 cut(s)	977
BstC8I	GCNNGC	2 cut(s)	594, 688
BstDEI	CTNAG	9 cut(s)	57, 104, 155, 281, 425, 533, 765, 873, 1298
BstDSI	CCRYGG	1 cut(s)	20
BstENI	CCTNNNNNAGG	1 cut(s)	56
BstF5I	GGATG	4 cut(s)	222, 781, 902, 1192
BstFNI	CGCG	2 cut(s)	380, 750
BstH2I	RGCGCY	1 cut(s)	599
BstHHI	GCGC	1 cut(s)	598
BstKTI	GATC	4 cut(s)	121, 470, 1117, 1322
BstMAI	GTCTC	3 cut(s)	1130, 1133, 1294
BstMBI	GATC	4 cut(s)	118, 467, 1114, 1319
BstMWI	GCNNNNNNNGC	9 cut(s)	227, 239, 419, 595, 598, 619, 716, 936, 977
BstNI	CCWGG	2 cut(s)	167, 179
BstNSI	RCATGY	2 cut(s)	387, 980
BstPAI	GACNNNNGTC	1 cut(s)	854
BstSCI	CCNGG	4 cut(s)	165, 177, 216, 225
BstSFI	CTRYAG	1 cut(s)	1311
BstUI	CGCG	2 cut(s)	380, 750
BstV1I	GCAGC	9 cut(s)	242, 573, 576, 585, 600, 702, 703, 775, 980
BstV2I	GAAGAC	4 cut(s)	265, 268, 565, 721
BstX2I	RGATCY	1 cut(s)	1114
BstXI	CCANNNNNNTGG	1 cut(s)	1066
BstYI	RGATCY	1 cut(s)	1114
Bsu15I	ATCGAT	1 cut(s)	470
BsuRI	GGCC	3 cut(s)	51, 221, 242
BsuTUI	ATCGAT	1 cut(s)	470
BtgI	CCRYGG	1 cut(s)	20
BtrI	CACGTC	1 cut(s)	571
BtsCI	GGATG	4 cut(s)	222, 781, 902, 1192
BtsI	GCAGTG	1 cut(s)	617
BtsIMutI	CAGTG	4 cut(s)	101, 366, 617, 1294
Cac8I	GCNNGC	2 cut(s)	594, 688
CaiI	CAGNNNCTG	1 cut(s)	986
CfoI	GCGC	1 cut(s)	598
Cfr10I	RCCGGY	1 cut(s)	350
Cfr13I	GGNCC	5 cut(s)	75, 90, 353, 493, 1280
ClaI	ATCGAT	1 cut(s)	470
Csp6I	GTAC	4 cut(s)	123, 195, 454, 1191
CspAI	ACCGGT	1 cut(s)	350
CviAII	CATG	7 cut(s)	21, 144, 384, 700, 977, 1060, 1111
CviQI	GTAC	4 cut(s)	123, 195, 454, 1191
DdeI	CTNAG	9 cut(s)	57, 104, 155, 281, 425, 533, 765, 873, 1298
DpnI	GATC	4 cut(s)	120, 469, 1116, 1321
DpnII	GATC	4 cut(s)	118, 467, 1114, 1319
DriI	GACNNNNNGTC	1 cut(s)	269
EaeI	YGGCCR	2 cut(s)	219, 240
Eam1104I	CTCTTC	4 cut(s)	65, 103, 515, 629
Eam1105I	GACNNNNNGTC	1 cut(s)	269
EarI	CTCTTC	4 cut(s)	65, 103, 515, 629
Eco130I	CCWWGG	2 cut(s)	20, 266
Eco147I	AGGCCT	1 cut(s)	51
Eco47I	GGWCC	5 cut(s)	75, 90, 353, 493, 1280
EcoNI	CCTNNNNNAGG	1 cut(s)	56
EcoO109I	RGGNCCY	1 cut(s)	90
EcoRII	CCWGG	2 cut(s)	165, 177
EcoT14I	CCWWGG	2 cut(s)	20, 266
ErhI	CCWWGG	2 cut(s)	20, 266
FaeI	CATG	7 cut(s)	24, 147, 387, 703, 980, 1063, 1114
FalI	AAGNNNNNCTT	2 cut(s)	1257, 1289
FatI	CATG	7 cut(s)	20, 143, 383, 699, 976, 1059, 1110
FokI	GGATG	4 cut(s)	209, 788, 889, 1199
FspBI	CTAG	3 cut(s)	305, 687, 1163
GlaI	GCGC	1 cut(s)	597
GsuI	CTGGAG	3 cut(s)	161, 841, 873
HaeII	RGCGCY	1 cut(s)	599
HaeIII	GGCC	3 cut(s)	51, 221, 242
HapII	CCGG	4 cut(s)	67, 218, 227, 351
HhaI	GCGC	1 cut(s)	598
Hin1II	CATG	7 cut(s)	24, 147, 387, 703, 980, 1063, 1114
Hin6I	GCGC	1 cut(s)	596
HinP1I	GCGC	1 cut(s)	596
HinfI	GANTC	8 cut(s)	245, 644, 742, 770, 816, 855, 908, 1216
HpaII	CCGG	4 cut(s)	67, 218, 227, 351
HphI	GGTGA	2 cut(s)	340, 737
Hpy166II	GTNNAC	2 cut(s)	149, 574
Hpy188I	TCNGA	8 cut(s)	118, 282, 426, 536, 775, 874, 907, 1299
Hpy188III	TCNNGA	6 cut(s)	133, 681, 739, 767, 820, 1003
Hpy8I	GTNNAC	2 cut(s)	149, 574
HpyAV	CCTTC	3 cut(s)	494, 531, 1183
HpyCH4III	ACNGT	3 cut(s)	361, 445, 1289
HpyCH4IV	ACGT	1 cut(s)	570
HpyCH4V	TGCA	5 cut(s)	968, 980, 1034, 1046, 1183
HpyF10VI	GCNNNNNNNGC	9 cut(s)	227, 239, 419, 595, 598, 619, 716, 936, 977
HpyF3I	CTNAG	9 cut(s)	57, 104, 155, 281, 425, 533, 765, 873, 1298
HpySE526I	ACGT	1 cut(s)	570
Hsp92II	CATG	7 cut(s)	24, 147, 387, 703, 980, 1063, 1114
HspAI	GCGC	1 cut(s)	596
KpnI	GGTACC	1 cut(s)	198
Kzo9I	GATC	4 cut(s)	118, 467, 1114, 1319
LguI	GCTCTTC	1 cut(s)	629
LmnI	GCTCC	6 cut(s)	61, 675, 983, 1244, 1273, 1331
Lsp1109I	GCAGC	9 cut(s)	242, 573, 576, 585, 600, 702, 703, 775, 980
LweI	GCATC	3 cut(s)	573, 775, 911
MaeI	CTAG	3 cut(s)	305, 687, 1163
MaeII	ACGT	1 cut(s)	570
MaeIII	GTNAC	1 cut(s)	605
MalI	GATC	4 cut(s)	120, 469, 1116, 1321
MbiI	CCGCTC	1 cut(s)	80
MboI	GATC	4 cut(s)	118, 467, 1114, 1319
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	1 cut(s)	1114
MhlI	GDGCHC	1 cut(s)	66
MluCI	AATT	6 cut(s)	138, 161, 810, 891, 1053, 1120
MlyI	GAGTC	4 cut(s)	239, 653, 736, 864
MmeI	TCCRAC	4 cut(s)	9, 380, 504, 823
MseI	TTAA	5 cut(s)	375, 1107, 1275, 1305, 1336
MslI	CAYNNNNRTG	3 cut(s)	446, 698, 1064
MspA1I	CMGCKG	1 cut(s)	1316
MspI	CCGG	4 cut(s)	67, 218, 227, 351
MspR9I	CCNGG	4 cut(s)	167, 179, 218, 227
MunI	CAATTG	1 cut(s)	891
MvaI	CCWGG	2 cut(s)	167, 179
MvnI	CGCG	2 cut(s)	380, 750
MwoI	GCNNNNNNNGC	9 cut(s)	227, 239, 419, 595, 598, 619, 716, 936, 977
NciI	CCSGG	2 cut(s)	218, 227
NcoI	CCATGG	1 cut(s)	20
NdeII	GATC	4 cut(s)	118, 467, 1114, 1319
NheI	GCTAGC	1 cut(s)	686
NlaIII	CATG	7 cut(s)	24, 147, 387, 703, 980, 1063, 1114
NlaIV	GGNNCC	4 cut(s)	196, 502, 1071, 1246
NmeAIII	GCCGAG	2 cut(s)	477, 817
NmuCI	GTSAC	1 cut(s)	605
NspI	RCATGY	2 cut(s)	387, 980
OliI	CACNNNNGTG	1 cut(s)	446
PceI	AGGCCT	1 cut(s)	51
PciI	ACATGT	1 cut(s)	383
PciSI	GCTCTTC	1 cut(s)	629
PcsI	WCGNNNNNNNCGW	1 cut(s)	131
PfeI	GAWTC	4 cut(s)	770, 816, 908, 1216
Pfl23II	CGTACG	1 cut(s)	122
PflMI	CCANNNNNTGG	1 cut(s)	1277
PfoI	TCCNGGA	1 cut(s)	177
PinAI	ACCGGT	1 cut(s)	350
PleI	GAGTC	4 cut(s)	239, 652, 736, 863
PpsI	GAGTC	4 cut(s)	239, 652, 736, 863
PpuMI	RGGWCCY	1 cut(s)	90
PscI	ACATGT	1 cut(s)	383
PshAI	GACNNNNGTC	1 cut(s)	854
Psp5II	RGGWCCY	1 cut(s)	90
Psp6I	CCWGG	2 cut(s)	165, 177
PspGI	CCWGG	2 cut(s)	165, 177
PspLI	CGTACG	1 cut(s)	122
PspN4I	GGNNCC	4 cut(s)	196, 502, 1071, 1246
PspPI	GGNCC	5 cut(s)	75, 90, 353, 493, 1280
PspPPI	RGGWCCY	1 cut(s)	90
PstNI	CAGNNNCTG	1 cut(s)	986
PsuI	RGATCY	1 cut(s)	1114
PvuII	CAGCTG	1 cut(s)	1316
RsaI	GTAC	4 cut(s)	124, 196, 455, 1192
RsaNI	GTAC	4 cut(s)	123, 195, 454, 1191
RseI	CAYNNNNRTG	3 cut(s)	446, 698, 1064
SapI	GCTCTTC	1 cut(s)	629
SaqAI	TTAA	5 cut(s)	375, 1107, 1275, 1305, 1336
Sau3AI	GATC	4 cut(s)	118, 467, 1114, 1319
Sau96I	GGNCC	5 cut(s)	75, 90, 353, 493, 1280
ScaI	AGTACT	1 cut(s)	455
SchI	GAGTC	4 cut(s)	239, 653, 736, 864
ScrFI	CCNGG	4 cut(s)	167, 179, 218, 227
SduI	GDGCHC	1 cut(s)	66
SfaNI	GCATC	3 cut(s)	573, 775, 911
SfcI	CTRYAG	1 cut(s)	1311
SinI	GGWCC	5 cut(s)	75, 90, 353, 493, 1280
SmiMI	CAYNNNNRTG	3 cut(s)	446, 698, 1064
SmlI	CTYRAG	2 cut(s)	1133, 1263
SmoI	CTYRAG	2 cut(s)	1133, 1263
Sse9I	AATT	6 cut(s)	138, 161, 810, 891, 1053, 1120
SseBI	AGGCCT	1 cut(s)	51
SsiI	CCGC	6 cut(s)	78, 516, 636, 657, 748, 803
SspMI	CTAG	3 cut(s)	305, 687, 1163
StuI	AGGCCT	1 cut(s)	51
StyD4I	CCNGG	4 cut(s)	165, 177, 216, 225
StyI	CCWWGG	2 cut(s)	20, 266
TaaI	ACNGT	3 cut(s)	361, 445, 1289
TaiI	ACGT	1 cut(s)	573
TaqI	TCGA	3 cut(s)	134, 470, 680
TasI	AATT	6 cut(s)	138, 161, 810, 891, 1053, 1120
TatI	WGTACW	1 cut(s)	453
TauI	GCSGC	2 cut(s)	638, 806
TfiI	GAWTC	4 cut(s)	770, 816, 908, 1216
Tru1I	TTAA	5 cut(s)	375, 1107, 1275, 1305, 1336
Tru9I	TTAA	5 cut(s)	375, 1107, 1275, 1305, 1336
TscAI	CASTG	4 cut(s)	108, 366, 624, 1294
TseFI	GTSAC	1 cut(s)	605
TseI	GCWGC	9 cut(s)	230, 586, 589, 598, 613, 690, 716, 788, 968
Tsp45I	GTSAC	1 cut(s)	605
TspDTI	ATGAA	1 cut(s)	922
TspGWI	ACGGA	1 cut(s)	637
TspRI	CASTG	4 cut(s)	108, 366, 624, 1294
Van91I	CCANNNNNTGG	1 cut(s)	1277
VpaK11BI	GGWCC	5 cut(s)	75, 90, 353, 493, 1280
XagI	CCTNNNNNAGG	1 cut(s)	56
XapI	RAATTY	1 cut(s)	138
XceI	RCATGY	2 cut(s)	387, 980
XcmI	CCANNNNNNNNNTGG	1 cut(s)	487
XspI	CTAG	3 cut(s)	305, 687, 1163
ZrmI	AGTACT	1 cut(s)	455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.