Prupe.6G138100_v2.0.a1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0003137
Physical Location & Seq
Forward (+)
11223633 .. 11228642
5010 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G138100.5

Sequence Viewer

Length: 1173 bp
ATGGGCGCGGTTTCGAAGGAGGCTCAGCTTTCGATTGCGGCTTCTTCAATGTTTCCTGGGTTTAGGTTTTCACCCACCGACGAGGAACTGATTTCCTATTACCTGAAGAACAAGCTGGAAGGACCTGAACCTGGGAAGAGCGTAGAGGTCATTCCTGAAGTCGATATTTGCAATTTCGAGCCCTGGGACTTGCCAGCCAAATCTGTTATTCAATCGGATAATGAGTGGTTCTTCTTTTCTCCACGAGGAAGAAAGTACCCAAATGGCTCACAAAGCAGAAGAGCAACAGAATTCGGTTATTGGAAAGCCACAGGTAAAGAACGCAACGTAAAGTCAACTTCTAATGTAATTGGTACAAAGAGGACACTTGTGTTCCACATGGGTCGTGCGCCAAAAGGGGAAAGGACAGAATGGATTATGCACGAATACTGCATGAATGACAAGTCCCAGGATTCTATTGTTGTTTGCCGCCTCCGGAAGAACAGTGATTTCCGTTTAAATGACACCACAAATGGAGGTTCTTCAAGTCGAAATCCTTTATCAACTGTGCATAATAGTGAAAATGCTGTCTCAGAAGTTGGTATTATTGACTATGATAAGCCAGTTGAATGCTATTCGAAGAAGTCTACTAGCAGTCATGATTCTCATTCTACTGAGCAAATTGATTCTGCATCTGAATCCAACCAAAAACAGACAACAGAGGTTACACAGACAGAATCTTCTGGCCACCAGAAGGGTTCTTATGATGATGACTTTTATGCGGATATACTGAATGATGATATCATCAAACTAGATGAAGTTTCAGTGTCTGCGTCTGCTGACACACTTCCAGTTCTTGCCAATAAGTCCGAGGCTGAACAAAATTCTCACCAGCCTATGCAAGCCATTTGTAATTCAGAAGCAATTCCTTTCCAAGGTACTGCCAACCGAAGAATCCATTTGCGAAAGAGAAAGGAAAAGTTTCCTGCTGAGTCACTGGATGGTCCCAATTCACACGAGTCACCAAAAACTTCAGCAGATAGGATGGACGATCAACACGTGCTATTATATGTAATTATTATTATTCTGGTATTGCTGGCTCTGTTTCTGTCCAAGTTTTGTTTTACTGACATTGCTGGCTCTGTTTCTTTCCTTGTTGAAAGGTTTCTGCCAAGTCAAAAACATCACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005886 GO:0006355 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009314 GO:0009416 GO:0009626 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009725 GO:0009739 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009910 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010648 GO:0010769 GO:0012501 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0023051 GO:0023057 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0033554 GO:0033619 GO:0033993 GO:0034050 GO:0034976 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045595 GO:0045893 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048573 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0060284 GO:0061458 GO:0065007 GO:0071214 GO:0071470 GO:0071472 GO:0071704 GO:0071944 GO:0080090 GO:0090351 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1901564 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000024 GO:2000026 GO:2000039 GO:2000112 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

391

Amino Acids

43.75

Weight (kDa)

5.88

Isoelectric Point (pI)

46.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 626
AccII CGCG 1 cut(s) 8
AccIII TCCGGA 1 cut(s) 474
AciI CCGC 4 cut(s) 8, 38, 469, 761
AcoI YGGCCR 1 cut(s) 724
AcsI RAATTY 2 cut(s) 290, 862
AcuI CTGAAG 3 cut(s) 125, 177, 996
AcvI CACGTG 1 cut(s) 1039
AfaI GTAC 3 cut(s) 257, 355, 919
AfiI CCNNNNNNNGG 3 cut(s) 131, 733, 914
AflIII ACRYGT 1 cut(s) 1036
AgsI TTSAA 5 cut(s) 48, 212, 525, 608, 1139
AjnI CCWGG 4 cut(s) 55, 130, 182, 447
AluBI AGCT 2 cut(s) 28, 115
AluI AGCT 2 cut(s) 28, 115
Alw26I GTCTC 1 cut(s) 574
AlwNI CAGNNNCTG 1 cut(s) 809
Aor13HI TCCGGA 1 cut(s) 474
AoxI GGCC 1 cut(s) 724
ApoI RAATTY 2 cut(s) 290, 862
Asp700I GAANNNNTTC 3 cut(s) 903, 960, 1143
AspLEI GCGC 2 cut(s) 8, 391
AspS9I GGNCC 2 cut(s) 122, 983
AsuHPI GGTGA 3 cut(s) 63, 860, 993
AsuII TTCGAA 2 cut(s) 14, 617
AvaII GGWCC 2 cut(s) 122, 983
BalI TGGCCA 1 cut(s) 726
BanII GRGCYC 1 cut(s) 183
BauI CACGAG 2 cut(s) 243, 995
BbrPI CACGTG 1 cut(s) 1039
BccI CCATC 2 cut(s) 974, 1018
BciT130I CCWGG 4 cut(s) 57, 132, 184, 449
BcoDI GTCTC 1 cut(s) 574
BfaI CTAG 2 cut(s) 630, 791
BisI GCNGC 2 cut(s) 39, 469
BlpI GCTNAGC 1 cut(s) 24
BlsI GCNGC 2 cut(s) 40, 470
Bme1390I CCNGG 4 cut(s) 57, 132, 184, 449
Bme18I GGWCC 2 cut(s) 122, 983
BmgT120I GGNCC 2 cut(s) 122, 983
BmiI GGNNCC 1 cut(s) 985
BmrFI CCNGG 4 cut(s) 57, 132, 184, 449
BmsI GCATC 1 cut(s) 680
Bpu1102I GCTNAGC 1 cut(s) 24
Bpu14I TTCGAA 2 cut(s) 14, 617
BsaAI YACGTR 1 cut(s) 1039
BsaJI CCNNGG 7 cut(s) 56, 131, 182, 183, 447, 849, 913
BsaWI WCCGGW 1 cut(s) 474
Bsc4I CCNNNNNNNGG 3 cut(s) 131, 733, 914
Bse1I ACTGG 3 cut(s) 602, 830, 981
Bse3DI GCAATG 1 cut(s) 1110
BseAI TCCGGA 1 cut(s) 474
BseBI CCWGG 4 cut(s) 57, 132, 184, 449
BseDI CCNNGG 7 cut(s) 56, 131, 182, 183, 447, 849, 913
BseGI GGATG 2 cut(s) 985, 1029
BseLI CCNNNNNNNGG 3 cut(s) 131, 733, 914
BseMI GCAATG 1 cut(s) 1110
BseMII CTCAG 4 cut(s) 38, 585, 645, 960
BseNI ACTGG 3 cut(s) 602, 830, 981
Bsh1236I CGCG 1 cut(s) 8
BshFI GGCC 1 cut(s) 726
BsiSI CCGG 1 cut(s) 475
BslFI GGGAC 3 cut(s) 200, 430, 969
BslI CCNNNNNNNGG 3 cut(s) 131, 733, 914
BsmAI GTCTC 1 cut(s) 574
BsmFI GGGAC 3 cut(s) 200, 430, 969
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 1 cut(s) 726
Bsp119I TTCGAA 2 cut(s) 14, 617
Bsp1286I GDGCHC 1 cut(s) 183
Bsp13I TCCGGA 1 cut(s) 474
Bsp143I GATC 1 cut(s) 1030
Bsp1720I GCTNAGC 1 cut(s) 24
BspACI CCGC 4 cut(s) 8, 38, 469, 761
BspANI GGCC 1 cut(s) 726
BspCNI CTCAG 4 cut(s) 37, 584, 646, 961
BspEI TCCGGA 1 cut(s) 474
BspFNI CGCG 1 cut(s) 8
BspHI TCATGA 1 cut(s) 637
BspLI GGNNCC 1 cut(s) 985
BspQI GCTCTTC 2 cut(s) 131, 274
BspT104I TTCGAA 2 cut(s) 14, 617
BsrDI GCAATG 1 cut(s) 1110
BsrI ACTGG 3 cut(s) 602, 830, 981
BssECI CCNNGG 7 cut(s) 56, 131, 182, 183, 447, 849, 913
BssMI GATC 1 cut(s) 1030
BssSI CACGAG 2 cut(s) 243, 995
BssT1I CCWWGG 1 cut(s) 913
Bst2BI CACGAG 2 cut(s) 243, 995
Bst2UI CCWGG 4 cut(s) 57, 132, 184, 449
Bst4CI ACNGT 2 cut(s) 485, 547
Bst6I CTCTTC 2 cut(s) 131, 274
BstBAI YACGTR 1 cut(s) 1039
BstBI TTCGAA 2 cut(s) 14, 617
BstC8I GCNNGC 4 cut(s) 195, 882, 1077, 1117
BstDEI CTNAG 4 cut(s) 24, 571, 654, 969
BstENI CCTNNNNNAGG 1 cut(s) 912
BstF5I GGATG 2 cut(s) 985, 1029
BstFNI CGCG 1 cut(s) 8
BstHHI GCGC 2 cut(s) 8, 391
BstKTI GATC 1 cut(s) 1033
BstMAI GTCTC 1 cut(s) 574
BstMBI GATC 1 cut(s) 1030
BstMWI GCNNNNNNNGC 1 cut(s) 273
BstNI CCWGG 4 cut(s) 57, 132, 184, 449
BstSCI CCNGG 4 cut(s) 55, 130, 182, 447
BstUI CGCG 1 cut(s) 8
BsuRI GGCC 1 cut(s) 726
BtsCI GGATG 2 cut(s) 985, 1029
BtsIMutI CAGTG 3 cut(s) 490, 810, 974
Cac8I GCNNGC 4 cut(s) 195, 882, 1077, 1117
CaiI CAGNNNCTG 1 cut(s) 809
CciI TCATGA 1 cut(s) 637
CfoI GCGC 2 cut(s) 8, 391
Cfr13I GGNCC 2 cut(s) 122, 983
CseI GACGC 1 cut(s) 801
Csp6I GTAC 3 cut(s) 256, 354, 918
CviAII CATG 3 cut(s) 379, 433, 638
CviQI GTAC 3 cut(s) 256, 354, 918
DdeI CTNAG 4 cut(s) 24, 571, 654, 969
DpnI GATC 1 cut(s) 1032
DpnII GATC 1 cut(s) 1030
DraI TTTAAA 1 cut(s) 498
EaeI YGGCCR 1 cut(s) 724
Eam1104I CTCTTC 2 cut(s) 131, 274
EarI CTCTTC 2 cut(s) 131, 274
Eco130I CCWWGG 1 cut(s) 913
Eco24I GRGCYC 1 cut(s) 183
Eco32I GATATC 1 cut(s) 781
Eco47I GGWCC 2 cut(s) 122, 983
Eco57I CTGAAG 3 cut(s) 125, 177, 996
Eco72I CACGTG 1 cut(s) 1039
EcoNI CCTNNNNNAGG 1 cut(s) 912
EcoO109I RGGNCCY 1 cut(s) 122
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 4 cut(s) 55, 130, 182, 447
EcoRV GATATC 1 cut(s) 781
EcoT14I CCWWGG 1 cut(s) 913
EcoT38I GRGCYC 1 cut(s) 183
ErhI CCWWGG 1 cut(s) 913
FaeI CATG 3 cut(s) 382, 436, 641
FaqI GGGAC 3 cut(s) 200, 430, 969
FatI CATG 3 cut(s) 378, 432, 637
FblI GTMKAC 1 cut(s) 626
Fnu4HI GCNGC 2 cut(s) 39, 469
FokI GGATG 2 cut(s) 992, 1036
FriOI GRGCYC 1 cut(s) 183
Fsp4HI GCNGC 2 cut(s) 39, 469
FspBI CTAG 2 cut(s) 630, 791
GlaI GCGC 2 cut(s) 7, 390
GluI GCNGC 2 cut(s) 39, 469
HaeIII GGCC 1 cut(s) 726
HapII CCGG 1 cut(s) 475
HgaI GACGC 1 cut(s) 801
HhaI GCGC 2 cut(s) 8, 391
Hin1II CATG 3 cut(s) 382, 436, 641
Hin6I GCGC 2 cut(s) 6, 389
HinP1I GCGC 2 cut(s) 6, 389
HincII GTYRAC 1 cut(s) 336
HindII GTYRAC 1 cut(s) 336
HinfI GANTC 8 cut(s) 452, 641, 665, 677, 716, 933, 971, 998
HpaII CCGG 1 cut(s) 475
HphI GGTGA 3 cut(s) 63, 860, 993
Hpy166II GTNNAC 2 cut(s) 336, 627
Hpy188I TCNGA 5 cut(s) 217, 574, 676, 850, 898
Hpy188III TCNNGA 3 cut(s) 155, 475, 638
Hpy8I GTNNAC 2 cut(s) 336, 627
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 3 cut(s) 10, 113, 727
HpyCH4III ACNGT 2 cut(s) 485, 547
HpyCH4IV ACGT 2 cut(s) 327, 1038
HpyCH4V TGCA 6 cut(s) 171, 421, 432, 550, 671, 880
HpyF10VI GCNNNNNNNGC 1 cut(s) 273
HpyF3I CTNAG 4 cut(s) 24, 571, 654, 969
HpySE526I ACGT 2 cut(s) 327, 1038
Hsp92II CATG 3 cut(s) 382, 436, 641
HspAI GCGC 2 cut(s) 6, 389
Kpn2I TCCGGA 1 cut(s) 474
Kzo9I GATC 1 cut(s) 1030
LguI GCTCTTC 2 cut(s) 131, 274
LweI GCATC 1 cut(s) 680
MaeI CTAG 2 cut(s) 630, 791
MaeII ACGT 2 cut(s) 327, 1038
MaeIII GTNAC 3 cut(s) 703, 972, 999
MalI GATC 1 cut(s) 1032
MboI GATC 1 cut(s) 1030
MhlI GDGCHC 1 cut(s) 183
MlsI TGGCCA 1 cut(s) 726
MluCI AATT 9 cut(s) 172, 290, 348, 660, 862, 892, 903, 988, 1053
MluNI TGGCCA 1 cut(s) 726
MlyI GAGTC 2 cut(s) 980, 1007
MmeI TCCRAC 1 cut(s) 705
MnlI CCTC 9 cut(s) 13, 76, 139, 239, 354, 482, 509, 694, 844
Mox20I TGGCCA 1 cut(s) 726
MroI TCCGGA 1 cut(s) 474
MroXI GAANNNNTTC 3 cut(s) 903, 960, 1143
MscI TGGCCA 1 cut(s) 726
MseI TTAA 1 cut(s) 497
MslI CAYNNNNRTG 1 cut(s) 555
Msp20I TGGCCA 1 cut(s) 726
MspI CCGG 1 cut(s) 475
MspR9I CCNGG 4 cut(s) 57, 132, 184, 449
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 4 cut(s) 57, 132, 184, 449
MvnI CGCG 1 cut(s) 8
MwoI GCNNNNNNNGC 1 cut(s) 273
NdeII GATC 1 cut(s) 1030
NlaIII CATG 3 cut(s) 382, 436, 641
NlaIV GGNNCC 1 cut(s) 985
NmuCI GTSAC 2 cut(s) 972, 999
NspV TTCGAA 2 cut(s) 14, 617
PagI TCATGA 1 cut(s) 637
PasI CCCWGGG 1 cut(s) 183
PciSI GCTCTTC 2 cut(s) 131, 274
PcsI WCGNNNNNNNCGW 1 cut(s) 1035
PctI GAATGC 1 cut(s) 614
PdmI GAANNNNTTC 3 cut(s) 903, 960, 1143
PfeI GAWTC 6 cut(s) 452, 641, 665, 677, 716, 933
PkrI GCNGC 2 cut(s) 40, 470
PleI GAGTC 2 cut(s) 979, 1006
PmaCI CACGTG 1 cut(s) 1039
PmlI CACGTG 1 cut(s) 1039
PpsI GAGTC 2 cut(s) 979, 1006
Ppu21I YACGTR 1 cut(s) 1039
PpuMI RGGWCCY 1 cut(s) 122
Psp5II RGGWCCY 1 cut(s) 122
Psp6I CCWGG 4 cut(s) 55, 130, 182, 447
PspCI CACGTG 1 cut(s) 1039
PspGI CCWGG 4 cut(s) 55, 130, 182, 447
PspN4I GGNNCC 1 cut(s) 985
PspPI GGNCC 2 cut(s) 122, 983
PspPPI RGGWCCY 1 cut(s) 122
PstNI CAGNNNCTG 1 cut(s) 809
RsaI GTAC 3 cut(s) 257, 355, 919
RsaNI GTAC 3 cut(s) 256, 354, 918
RseI CAYNNNNRTG 1 cut(s) 555
SapI GCTCTTC 2 cut(s) 131, 274
SaqAI TTAA 1 cut(s) 497
SatI GCNGC 2 cut(s) 39, 469
Sau3AI GATC 1 cut(s) 1030
Sau96I GGNCC 2 cut(s) 122, 983
SchI GAGTC 2 cut(s) 980, 1007
ScrFI CCNGG 4 cut(s) 57, 132, 184, 449
SduI GDGCHC 1 cut(s) 183
SfaNI GCATC 1 cut(s) 680
SfuI TTCGAA 2 cut(s) 14, 617
SinI GGWCC 2 cut(s) 122, 983
SmiMI CAYNNNNRTG 1 cut(s) 555
Sse9I AATT 9 cut(s) 172, 290, 348, 660, 862, 892, 903, 988, 1053
SsiI CCGC 4 cut(s) 8, 38, 469, 761
SspMI CTAG 2 cut(s) 630, 791
StyD4I CCNGG 4 cut(s) 55, 130, 182, 447
StyI CCWWGG 1 cut(s) 913
TaaI ACNGT 2 cut(s) 485, 547
TaiI ACGT 2 cut(s) 330, 1041
TaqI TCGA 6 cut(s) 14, 32, 162, 177, 529, 617
TasI AATT 9 cut(s) 172, 290, 348, 660, 862, 892, 903, 988, 1053
TauI GCSGC 2 cut(s) 41, 471
TfiI GAWTC 6 cut(s) 452, 641, 665, 677, 716, 933
Tru1I TTAA 1 cut(s) 497
Tru9I TTAA 1 cut(s) 497
TscAI CASTG 3 cut(s) 490, 810, 981
TseFI GTSAC 2 cut(s) 972, 999
Tsp45I GTSAC 2 cut(s) 972, 999
TspDTI ATGAA 2 cut(s) 449, 810
TspGWI ACGGA 1 cut(s) 482
TspRI CASTG 3 cut(s) 490, 810, 981
VpaK11BI GGWCC 2 cut(s) 122, 983
XagI CCTNNNNNAGG 1 cut(s) 912
XapI RAATTY 2 cut(s) 290, 862
XmiI GTMKAC 1 cut(s) 626
XmnI GAANNNNTTC 3 cut(s) 903, 960, 1143
XspI CTAG 2 cut(s) 630, 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.