Thionin-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G35698 |
| fragaria_vesca | FvH4_6g30990 |
| malus_domestica | MD09G1214500.v1.1 MD09G1214600.v1.1 MD17G1196900.v1.1 |
| prunus_persica | Prupe.3G072600_v2.0.a1 Prupe.3G072700_v2.0.a1 Prupe.3G072800_v2.0.a1 Prupe.3G072900_v2.0.a1 Prupe.3G073000_v2.0.a1 Prupe.3G073100_v2.0.a1 Prupe.3G073200_v2.0.a1 Prupe.3G073800_v2.0.a1 Prupe.6G180200_v2.0.a1 |
| pyrus_communis | pycom09g13140 pycom17g20200 |
| rosa_chinensis | RchiOBHm_Chr7g0236281 |
| rosa_laevigata | RLG00000001091 RLG00000019664 |
| rosa_multiflora | Rmu_sc0000765.1_g000025 |
| rosa_roxburghii | Rroxscaffold_2G00106990 Rroxscaffold_3G00225280 |
| rosa_rugosa | Rorug02G0345300 |
| rosa_samantha | Rh2AG391300 Rh2BG398800 Rh2CG378300 Rh2DG413900 Rh7AG450100 Rh7CG470000 Rh7DG439400 |
| rosa_wichuraiana | Rw2G032050 Rw7G037420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AflIII | ACRYGT | 1 cut(s) | 324 |
| AluBI | AGCT | 1 cut(s) | 214 |
| AluI | AGCT | 1 cut(s) | 214 |
| AoxI | GGCC | 2 cut(s) | 61, 305 |
| ApeKI | GCWGC | 1 cut(s) | 52 |
| AseI | ATTAAT | 1 cut(s) | 264 |
| AspS9I | GGNCC | 1 cut(s) | 305 |
| AsuC2I | CCSGG | 1 cut(s) | 304 |
| BbsI | GAAGAC | 1 cut(s) | 276 |
| BbvI | GCAGC | 1 cut(s) | 39 |
| BcnI | CCSGG | 1 cut(s) | 304 |
| BisI | GCNGC | 1 cut(s) | 53 |
| BlsI | GCNGC | 1 cut(s) | 54 |
| Bme1390I | CCNGG | 1 cut(s) | 304 |
| BmgT120I | GGNCC | 1 cut(s) | 305 |
| BmrFI | CCNGG | 1 cut(s) | 304 |
| BpiI | GAAGAC | 1 cut(s) | 276 |
| Bpu10I | CCTNAGC | 1 cut(s) | 17 |
| BpuMI | CCSGG | 1 cut(s) | 304 |
| BsaAI | YACGTR | 1 cut(s) | 325 |
| Bse1I | ACTGG | 1 cut(s) | 64 |
| BseGI | GGATG | 1 cut(s) | 183 |
| BseNI | ACTGG | 1 cut(s) | 64 |
| BseXI | GCAGC | 1 cut(s) | 39 |
| BshFI | GGCC | 2 cut(s) | 63, 307 |
| BsiSI | CCGG | 1 cut(s) | 303 |
| BslFI | GGGAC | 1 cut(s) | 52 |
| BsmFI | GGGAC | 1 cut(s) | 52 |
| BsnI | GGCC | 2 cut(s) | 63, 307 |
| BspANI | GGCC | 2 cut(s) | 63, 307 |
| BsrI | ACTGG | 1 cut(s) | 64 |
| BstBAI | YACGTR | 1 cut(s) | 325 |
| BstC8I | GCNNGC | 3 cut(s) | 104, 212, 286 |
| BstDEI | CTNAG | 1 cut(s) | 17 |
| BstF5I | GGATG | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 216 |
| BstNSI | RCATGY | 1 cut(s) | 106 |
| BstSCI | CCNGG | 1 cut(s) | 302 |
| BstV1I | GCAGC | 1 cut(s) | 39 |
| BstV2I | GAAGAC | 1 cut(s) | 276 |
| BsuRI | GGCC | 2 cut(s) | 63, 307 |
| BtsCI | GGATG | 1 cut(s) | 183 |
| Cac8I | GCNNGC | 3 cut(s) | 104, 212, 286 |
| Cfr13I | GGNCC | 1 cut(s) | 305 |
| CviAII | CATG | 1 cut(s) | 103 |
| CviJI | RGCY | 5 cut(s) | 52, 63, 214, 219, 307 |
| CviKI_1 | RGCY | 5 cut(s) | 52, 63, 214, 219, 307 |
| DdeI | CTNAG | 1 cut(s) | 17 |
| FaeI | CATG | 1 cut(s) | 106 |
| FaiI | YATR | 5 cut(s) | 59, 93, 104, 110, 112 |
| FaqI | GGGAC | 1 cut(s) | 52 |
| FatI | CATG | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 1 cut(s) | 53 |
| FokI | GGATG | 1 cut(s) | 170 |
| Fsp4HI | GCNGC | 1 cut(s) | 53 |
| GluI | GCNGC | 1 cut(s) | 53 |
| HaeIII | GGCC | 2 cut(s) | 63, 307 |
| HapII | CCGG | 1 cut(s) | 303 |
| Hin1II | CATG | 1 cut(s) | 106 |
| HindIII | AAGCTT | 1 cut(s) | 212 |
| HinfI | GANTC | 1 cut(s) | 293 |
| HpaII | CCGG | 1 cut(s) | 303 |
| Hpy166II | GTNNAC | 1 cut(s) | 280 |
| Hpy188I | TCNGA | 1 cut(s) | 156 |
| Hpy8I | GTNNAC | 1 cut(s) | 280 |
| HpyCH4IV | ACGT | 1 cut(s) | 324 |
| HpyCH4V | TGCA | 3 cut(s) | 102, 146, 210 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 216 |
| HpyF3I | CTNAG | 1 cut(s) | 17 |
| HpySE526I | ACGT | 1 cut(s) | 324 |
| Hsp92II | CATG | 1 cut(s) | 106 |
| LmnI | GCTCC | 2 cut(s) | 305, 317 |
| LpnPI | CCDG | 4 cut(s) | 77, 81, 175, 316 |
| Lsp1109I | GCAGC | 1 cut(s) | 39 |
| MaeII | ACGT | 1 cut(s) | 324 |
| MboII | GAAGA | 1 cut(s) | 281 |
| MluCI | AATT | 1 cut(s) | 171 |
| MseI | TTAA | 1 cut(s) | 264 |
| MslI | CAYNNNNRTG | 1 cut(s) | 232 |
| MspI | CCGG | 1 cut(s) | 303 |
| MspR9I | CCNGG | 1 cut(s) | 304 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 216 |
| NciI | CCSGG | 1 cut(s) | 304 |
| NlaIII | CATG | 1 cut(s) | 106 |
| NspI | RCATGY | 1 cut(s) | 106 |
| PaeI | GCATGC | 1 cut(s) | 106 |
| PfeI | GAWTC | 1 cut(s) | 293 |
| PkrI | GCNGC | 1 cut(s) | 54 |
| Ppu21I | YACGTR | 1 cut(s) | 325 |
| PshBI | ATTAAT | 1 cut(s) | 264 |
| PspPI | GGNCC | 1 cut(s) | 305 |
| RseI | CAYNNNNRTG | 1 cut(s) | 232 |
| SaqAI | TTAA | 1 cut(s) | 264 |
| SatI | GCNGC | 1 cut(s) | 53 |
| Sau96I | GGNCC | 1 cut(s) | 305 |
| ScrFI | CCNGG | 1 cut(s) | 304 |
| SetI | ASST | 3 cut(s) | 23, 216, 327 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 232 |
| SphI | GCATGC | 1 cut(s) | 106 |
| Sse9I | AATT | 1 cut(s) | 171 |
| SspI | AATATT | 2 cut(s) | 244, 262 |
| StyD4I | CCNGG | 1 cut(s) | 302 |
| TaiI | ACGT | 1 cut(s) | 327 |
| TasI | AATT | 1 cut(s) | 171 |
| TfiI | GAWTC | 1 cut(s) | 293 |
| Tru1I | TTAA | 1 cut(s) | 264 |
| Tru9I | TTAA | 1 cut(s) | 264 |
| TseI | GCWGC | 1 cut(s) | 52 |
| TspDTI | ATGAA | 1 cut(s) | 282 |
| TspGWI | ACGGA | 1 cut(s) | 194 |
| VspI | ATTAAT | 1 cut(s) | 264 |
| XceI | RCATGY | 1 cut(s) | 106 |