3'-5' exonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56310 AT1G56310 |
| fragaria_vesca | FvH4_5g34880 FvH4_5g34880 FvH4_6g07170 FvH4_6g07170 |
| malus_domestica | MD04G1195700.v1.1 MD12G1208000.v1.1 |
| prunus_persica | Prupe.6G315500_v2.0.a1 Prupe.6G315500_v2.0.a1 Prupe.6G315500_v2.0.a1 Prupe.6G315500_v2.0.a1 Prupe.6G315500_v2.0.a1 |
| pyrus_communis | pycom04g17290 pycom12g19550 |
| rosa_chinensis | RchiOBHm_Chr3g0456811 RchiOBHm_Chr7g0235801 |
| rosa_laevigata | RLG00000001137 RLG00000001138 RLG00000025277 |
| rosa_roxburghii | Rroxscaffold_3G00225620 Rroxscaffold_6G00422480 |
| rosa_rugosa | Rorug03G0015800 Rorug03G0015900 Rorug07G0292900 Rorug07G0293000 |
| rosa_samantha | Rh3AG076200 Rh3BG078100 Rh3CG077900 Rh7AG447800 Rh7CG468300 Rh7DG436800 |
| rosa_wichuraiana | Rw3G006540 Rw7G037210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 206 |
| AciI | CCGC | 3 cut(s) | 522, 613, 1551 |
| AclWI | GGATC | 1 cut(s) | 206 |
| AcoI | YGGCCR | 1 cut(s) | 622 |
| AcsI | RAATTY | 2 cut(s) | 44, 791 |
| AcuI | CTGAAG | 2 cut(s) | 303, 1623 |
| AcvI | CACGTG | 1 cut(s) | 345 |
| AfaI | GTAC | 4 cut(s) | 201, 728, 815, 999 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 221, 331, 1430 |
| AflIII | ACRYGT | 1 cut(s) | 26 |
| AjnI | CCWGG | 3 cut(s) | 220, 369, 720 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 777, 809 |
| AluBI | AGCT | 5 cut(s) | 449, 825, 1045, 1528, 1541 |
| AluI | AGCT | 5 cut(s) | 449, 825, 1045, 1528, 1541 |
| Alw21I | GWGCWC | 1 cut(s) | 603 |
| Alw26I | GTCTC | 1 cut(s) | 570 |
| AlwI | GGATC | 1 cut(s) | 206 |
| Ama87I | CYCGRG | 2 cut(s) | 1001, 1425 |
| AoxI | GGCC | 3 cut(s) | 18, 622, 1508 |
| ApeKI | GCWGC | 3 cut(s) | 668, 1167, 1538 |
| ApoI | RAATTY | 2 cut(s) | 44, 791 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 189, 1412 |
| AspA2I | CCTAGG | 1 cut(s) | 1298 |
| AspLEI | GCGC | 1 cut(s) | 207 |
| AspS9I | GGNCC | 2 cut(s) | 18, 224 |
| AvaI | CYCGRG | 2 cut(s) | 1001, 1425 |
| AvaII | GGWCC | 1 cut(s) | 224 |
| AvrII | CCTAGG | 1 cut(s) | 1298 |
| BalI | TGGCCA | 1 cut(s) | 624 |
| BanII | GRGCYC | 1 cut(s) | 407 |
| BbrPI | CACGTG | 1 cut(s) | 345 |
| BbsI | GAAGAC | 1 cut(s) | 1004 |
| Bbv12I | GWGCWC | 1 cut(s) | 603 |
| BbvI | GCAGC | 3 cut(s) | 680, 1179, 1550 |
| BceAI | ACGGC | 2 cut(s) | 303, 1523 |
| BciT130I | CCWGG | 3 cut(s) | 222, 371, 722 |
| BclI | TGATCA | 1 cut(s) | 1233 |
| BcoDI | GTCTC | 1 cut(s) | 570 |
| BfaI | CTAG | 2 cut(s) | 197, 1299 |
| BfmI | CTRYAG | 1 cut(s) | 582 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 621 |
| BisI | GCNGC | 4 cut(s) | 669, 1168, 1539, 1551 |
| BlnI | CCTAGG | 1 cut(s) | 1298 |
| BlsI | GCNGC | 4 cut(s) | 670, 1169, 1540, 1552 |
| BmcAI | AGTACT | 2 cut(s) | 201, 728 |
| Bme1390I | CCNGG | 3 cut(s) | 222, 371, 722 |
| Bme18I | GGWCC | 1 cut(s) | 224 |
| BmeT110I | CYCGRG | 2 cut(s) | 1001, 1425 |
| BmgT120I | GGNCC | 2 cut(s) | 18, 224 |
| BmrFI | CCNGG | 3 cut(s) | 222, 371, 722 |
| BmrI | ACTGGG | 1 cut(s) | 1469 |
| BmsI | GCATC | 5 cut(s) | 842, 1042, 1106, 1380, 1537 |
| BmuI | ACTGGG | 1 cut(s) | 1469 |
| BpiI | GAAGAC | 1 cut(s) | 1004 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 590, 622 |
| BpuEI | CTTGAG | 1 cut(s) | 1646 |
| Bsa29I | ATCGAT | 2 cut(s) | 390, 964 |
| BsaAI | YACGTR | 2 cut(s) | 29, 345 |
| BsaBI | GATNNNNATC | 1 cut(s) | 459 |
| BsaJI | CCNNGG | 4 cut(s) | 1002, 1298, 1424, 1582 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 221, 331, 1430 |
| Bse118I | RCCGGY | 1 cut(s) | 226 |
| Bse1I | ACTGG | 2 cut(s) | 1401, 1464 |
| Bse3DI | GCAATG | 2 cut(s) | 214, 927 |
| Bse8I | GATNNNNATC | 1 cut(s) | 459 |
| BseBI | CCWGG | 3 cut(s) | 222, 371, 722 |
| BseCI | ATCGAT | 2 cut(s) | 390, 964 |
| BseDI | CCNNGG | 4 cut(s) | 1002, 1298, 1424, 1582 |
| BseGI | GGATG | 5 cut(s) | 857, 865, 1121, 1273, 1401 |
| BseJI | GATNNNNATC | 1 cut(s) | 459 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 221, 331, 1430 |
| BseMI | GCAATG | 2 cut(s) | 214, 927 |
| BseMII | CTCAG | 4 cut(s) | 482, 951, 1051, 1607 |
| BseNI | ACTGG | 2 cut(s) | 1401, 1464 |
| BseXI | GCAGC | 3 cut(s) | 680, 1179, 1550 |
| BseYI | CCCAGC | 1 cut(s) | 855 |
| Bsh1285I | CGRYCG | 1 cut(s) | 964 |
| BshFI | GGCC | 3 cut(s) | 20, 624, 1510 |
| BshVI | ATCGAT | 2 cut(s) | 390, 964 |
| BsiEI | CGRYCG | 1 cut(s) | 964 |
| BsiHKAI | GWGCWC | 1 cut(s) | 603 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1001, 1425 |
| BsiSI | CCGG | 1 cut(s) | 227 |
| BslFI | GGGAC | 1 cut(s) | 362 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 221, 331, 1430 |
| BsmAI | GTCTC | 1 cut(s) | 570 |
| BsmFI | GGGAC | 1 cut(s) | 362 |
| BsmI | GAATGC | 1 cut(s) | 994 |
| BsnI | GGCC | 3 cut(s) | 20, 624, 1510 |
| BsoBI | CYCGRG | 2 cut(s) | 1001, 1425 |
| Bsp1286I | GDGCHC | 2 cut(s) | 407, 603 |
| Bsp143I | GATC | 3 cut(s) | 211, 961, 1233 |
| Bsp19I | CCATGG | 1 cut(s) | 1582 |
| BspACI | CCGC | 3 cut(s) | 522, 613, 1551 |
| BspANI | GGCC | 3 cut(s) | 20, 624, 1510 |
| BspCNI | CTCAG | 4 cut(s) | 483, 950, 1050, 1606 |
| BspDI | ATCGAT | 2 cut(s) | 390, 964 |
| BspHI | TCATGA | 1 cut(s) | 415 |
| BspMAI | CTGCAG | 1 cut(s) | 586 |
| BspPI | GGATC | 1 cut(s) | 206 |
| BspQI | GCTCTTC | 1 cut(s) | 318 |
| BsrDI | GCAATG | 2 cut(s) | 214, 927 |
| BsrFI | RCCGGY | 1 cut(s) | 226 |
| BsrI | ACTGG | 2 cut(s) | 1401, 1464 |
| BssAI | RCCGGY | 1 cut(s) | 226 |
| BssECI | CCNNGG | 4 cut(s) | 1002, 1298, 1424, 1582 |
| BssMI | GATC | 3 cut(s) | 211, 961, 1233 |
| BssT1I | CCWWGG | 2 cut(s) | 1298, 1582 |
| Bst2UI | CCWGG | 3 cut(s) | 222, 371, 722 |
| Bst4CI | ACNGT | 1 cut(s) | 884 |
| Bst6I | CTCTTC | 2 cut(s) | 318, 1356 |
| BstBAI | YACGTR | 2 cut(s) | 29, 345 |
| BstC8I | GCNNGC | 4 cut(s) | 71, 75, 133, 1446 |
| BstDEI | CTNAG | 6 cut(s) | 162, 491, 638, 937, 1037, 1593 |
| BstDSI | CCRYGG | 1 cut(s) | 1582 |
| BstF5I | GGATG | 5 cut(s) | 857, 865, 1121, 1273, 1401 |
| BstHHI | GCGC | 1 cut(s) | 207 |
| BstKTI | GATC | 3 cut(s) | 214, 964, 1236 |
| BstMAI | GTCTC | 1 cut(s) | 570 |
| BstMBI | GATC | 3 cut(s) | 211, 961, 1233 |
| BstMCI | CGRYCG | 1 cut(s) | 964 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 621, 926, 1516, 1525, 1547 |
| BstNI | CCWGG | 3 cut(s) | 222, 371, 722 |
| BstNSI | RCATGY | 2 cut(s) | 77, 745 |
| BstSCI | CCNGG | 3 cut(s) | 220, 369, 720 |
| BstSFI | CTRYAG | 1 cut(s) | 582 |
| BstV1I | GCAGC | 3 cut(s) | 680, 1179, 1550 |
| BstV2I | GAAGAC | 1 cut(s) | 1004 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1583 |
| Bsu15I | ATCGAT | 2 cut(s) | 390, 964 |
| BsuRI | GGCC | 3 cut(s) | 20, 624, 1510 |
| BsuTUI | ATCGAT | 2 cut(s) | 390, 964 |
| BtgI | CCRYGG | 1 cut(s) | 1582 |
| BtsCI | GGATG | 5 cut(s) | 857, 865, 1121, 1273, 1401 |
| BtsIMutI | CAGTG | 2 cut(s) | 251, 1045 |
| Cac8I | GCNNGC | 4 cut(s) | 71, 75, 133, 1446 |
| CciI | TCATGA | 1 cut(s) | 415 |
| CfoI | GCGC | 1 cut(s) | 207 |
| Cfr10I | RCCGGY | 1 cut(s) | 226 |
| Cfr13I | GGNCC | 2 cut(s) | 18, 224 |
| ClaI | ATCGAT | 2 cut(s) | 390, 964 |
| CseI | GACGC | 1 cut(s) | 1525 |
| Csp6I | GTAC | 4 cut(s) | 200, 727, 814, 998 |
| CviAII | CATG | 9 cut(s) | 74, 416, 691, 742, 788, 1192, 1577, 1583, 1654 |
| CviQI | GTAC | 4 cut(s) | 200, 727, 814, 998 |
| DdeI | CTNAG | 6 cut(s) | 162, 491, 638, 937, 1037, 1593 |
| DpnI | GATC | 3 cut(s) | 213, 963, 1235 |
| DpnII | GATC | 3 cut(s) | 211, 961, 1233 |
| EaeI | YGGCCR | 1 cut(s) | 622 |
| Eam1104I | CTCTTC | 2 cut(s) | 318, 1356 |
| EarI | CTCTTC | 2 cut(s) | 318, 1356 |
| EciI | GGCGGA | 1 cut(s) | 602 |
| Eco130I | CCWWGG | 2 cut(s) | 1298, 1582 |
| Eco24I | GRGCYC | 1 cut(s) | 407 |
| Eco32I | GATATC | 1 cut(s) | 1252 |
| Eco47I | GGWCC | 1 cut(s) | 224 |
| Eco57I | CTGAAG | 2 cut(s) | 303, 1623 |
| Eco72I | CACGTG | 1 cut(s) | 345 |
| Eco88I | CYCGRG | 2 cut(s) | 1001, 1425 |
| EcoRII | CCWGG | 3 cut(s) | 220, 369, 720 |
| EcoRV | GATATC | 1 cut(s) | 1252 |
| EcoT14I | CCWWGG | 2 cut(s) | 1298, 1582 |
| EcoT38I | GRGCYC | 1 cut(s) | 407 |
| ErhI | CCWWGG | 2 cut(s) | 1298, 1582 |
| FaeI | CATG | 9 cut(s) | 77, 419, 694, 745, 791, 1195, 1580, 1586, 1657 |
| FaqI | GGGAC | 1 cut(s) | 362 |
| FatI | CATG | 9 cut(s) | 73, 415, 690, 741, 787, 1191, 1576, 1582, 1653 |
| FauNDI | CATATG | 1 cut(s) | 1357 |
| FbaI | TGATCA | 1 cut(s) | 1233 |
| Fnu4HI | GCNGC | 4 cut(s) | 669, 1168, 1539, 1551 |
| FokI | GGATG | 5 cut(s) | 864, 872, 1128, 1280, 1388 |
| FriOI | GRGCYC | 1 cut(s) | 407 |
| Fsp4HI | GCNGC | 4 cut(s) | 669, 1168, 1539, 1551 |
| FspBI | CTAG | 2 cut(s) | 197, 1299 |
| FspI | TGCGCA | 1 cut(s) | 206 |
| GlaI | GCGC | 1 cut(s) | 206 |
| GluI | GCNGC | 4 cut(s) | 669, 1168, 1539, 1551 |
| GsaI | CCCAGC | 1 cut(s) | 859 |
| HaeIII | GGCC | 3 cut(s) | 20, 624, 1510 |
| HapII | CCGG | 1 cut(s) | 227 |
| HgaI | GACGC | 1 cut(s) | 1525 |
| HhaI | GCGC | 1 cut(s) | 207 |
| Hin1II | CATG | 9 cut(s) | 77, 419, 694, 745, 791, 1195, 1580, 1586, 1657 |
| Hin6I | GCGC | 1 cut(s) | 205 |
| HinP1I | GCGC | 1 cut(s) | 205 |
| HindIII | AAGCTT | 1 cut(s) | 447 |
| HinfI | GANTC | 6 cut(s) | 350, 439, 563, 1271, 1303, 1522 |
| HpaII | CCGG | 1 cut(s) | 227 |
| Hpy188I | TCNGA | 7 cut(s) | 54, 85, 173, 283, 940, 1207, 1596 |
| HpyAV | CCTTC | 5 cut(s) | 278, 971, 1049, 1598, 1672 |
| HpyCH4III | ACNGT | 1 cut(s) | 884 |
| HpyCH4IV | ACGT | 3 cut(s) | 28, 344, 1260 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 621, 926, 1516, 1525, 1547 |
| HpyF3I | CTNAG | 6 cut(s) | 162, 491, 638, 937, 1037, 1593 |
| HpySE526I | ACGT | 3 cut(s) | 28, 344, 1260 |
| Hsp92II | CATG | 9 cut(s) | 77, 419, 694, 745, 791, 1195, 1580, 1586, 1657 |
| HspAI | GCGC | 1 cut(s) | 205 |
| Ksp22I | TGATCA | 1 cut(s) | 1233 |
| Kzo9I | GATC | 3 cut(s) | 211, 961, 1233 |
| LguI | GCTCTTC | 1 cut(s) | 318 |
| LmnI | GCTCC | 1 cut(s) | 1501 |
| Lsp1109I | GCAGC | 3 cut(s) | 680, 1179, 1550 |
| LweI | GCATC | 5 cut(s) | 842, 1042, 1106, 1380, 1537 |
| MaeI | CTAG | 2 cut(s) | 197, 1299 |
| MaeII | ACGT | 3 cut(s) | 28, 344, 1260 |
| MaeIII | GTNAC | 3 cut(s) | 29, 586, 932 |
| MalI | GATC | 3 cut(s) | 213, 963, 1235 |
| MboI | GATC | 3 cut(s) | 211, 961, 1233 |
| MboII | GAAGA | 4 cut(s) | 305, 448, 1004, 1373 |
| MfeI | CAATTG | 2 cut(s) | 659, 1495 |
| MhlI | GDGCHC | 2 cut(s) | 407, 603 |
| MlsI | TGGCCA | 1 cut(s) | 624 |
| MluCI | AATT | 7 cut(s) | 44, 659, 791, 836, 1197, 1321, 1495 |
| MluNI | TGGCCA | 1 cut(s) | 624 |
| MlyI | GAGTC | 2 cut(s) | 344, 572 |
| MmeI | TCCRAC | 1 cut(s) | 808 |
| Mox20I | TGGCCA | 1 cut(s) | 624 |
| MroXI | GAANNNNTTC | 2 cut(s) | 189, 1412 |
| MscI | TGGCCA | 1 cut(s) | 624 |
| MseI | TTAA | 2 cut(s) | 48, 1277 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1038, 1356, 1581 |
| Msp20I | TGGCCA | 1 cut(s) | 624 |
| MspA1I | CMGCKG | 2 cut(s) | 1528, 1553 |
| MspI | CCGG | 1 cut(s) | 227 |
| MspR9I | CCNGG | 3 cut(s) | 222, 371, 722 |
| MunI | CAATTG | 2 cut(s) | 659, 1495 |
| Mva1269I | GAATGC | 1 cut(s) | 994 |
| MvaI | CCWGG | 3 cut(s) | 222, 371, 722 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 621, 926, 1516, 1525, 1547 |
| NcoI | CCATGG | 1 cut(s) | 1582 |
| NdeI | CATATG | 1 cut(s) | 1357 |
| NdeII | GATC | 3 cut(s) | 211, 961, 1233 |
| NlaIII | CATG | 9 cut(s) | 77, 419, 694, 745, 791, 1195, 1580, 1586, 1657 |
| NmeAIII | GCCGAG | 1 cut(s) | 1293 |
| NsbI | TGCGCA | 1 cut(s) | 206 |
| NspI | RCATGY | 2 cut(s) | 77, 745 |
| PaeI | GCATGC | 1 cut(s) | 77 |
| PagI | TCATGA | 1 cut(s) | 415 |
| PciSI | GCTCTTC | 1 cut(s) | 318 |
| PctI | GAATGC | 1 cut(s) | 994 |
| PdmI | GAANNNNTTC | 2 cut(s) | 189, 1412 |
| PfeI | GAWTC | 4 cut(s) | 439, 1271, 1303, 1522 |
| PfoI | TCCNGGA | 1 cut(s) | 720 |
| PkrI | GCNGC | 4 cut(s) | 670, 1169, 1540, 1552 |
| Ple19I | CGATCG | 1 cut(s) | 964 |
| PleI | GAGTC | 2 cut(s) | 344, 571 |
| PmaCI | CACGTG | 1 cut(s) | 345 |
| PmlI | CACGTG | 1 cut(s) | 345 |
| PpsI | GAGTC | 2 cut(s) | 344, 571 |
| Ppu21I | YACGTR | 2 cut(s) | 29, 345 |
| Psp6I | CCWGG | 3 cut(s) | 220, 369, 720 |
| PspCI | CACGTG | 1 cut(s) | 345 |
| PspFI | CCCAGC | 1 cut(s) | 855 |
| PspGI | CCWGG | 3 cut(s) | 220, 369, 720 |
| PspPI | GGNCC | 2 cut(s) | 18, 224 |
| PstI | CTGCAG | 1 cut(s) | 586 |
| PvuI | CGATCG | 1 cut(s) | 964 |
| PvuII | CAGCTG | 1 cut(s) | 1528 |
| RsaI | GTAC | 4 cut(s) | 201, 728, 815, 999 |
| RsaNI | GTAC | 4 cut(s) | 200, 727, 814, 998 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1038, 1356, 1581 |
| SapI | GCTCTTC | 1 cut(s) | 318 |
| SaqAI | TTAA | 2 cut(s) | 48, 1277 |
| SatI | GCNGC | 4 cut(s) | 669, 1168, 1539, 1551 |
| Sau3AI | GATC | 3 cut(s) | 211, 961, 1233 |
| Sau96I | GGNCC | 2 cut(s) | 18, 224 |
| ScaI | AGTACT | 2 cut(s) | 201, 728 |
| SchI | GAGTC | 2 cut(s) | 344, 572 |
| ScrFI | CCNGG | 3 cut(s) | 222, 371, 722 |
| SduI | GDGCHC | 2 cut(s) | 407, 603 |
| SfaNI | GCATC | 5 cut(s) | 842, 1042, 1106, 1380, 1537 |
| SfcI | CTRYAG | 1 cut(s) | 582 |
| SinI | GGWCC | 1 cut(s) | 224 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1038, 1356, 1581 |
| SmlI | CTYRAG | 1 cut(s) | 1625 |
| SmoI | CTYRAG | 1 cut(s) | 1625 |
| SphI | GCATGC | 1 cut(s) | 77 |
| Sse9I | AATT | 7 cut(s) | 44, 659, 791, 836, 1197, 1321, 1495 |
| SsiI | CCGC | 3 cut(s) | 522, 613, 1551 |
| SspMI | CTAG | 2 cut(s) | 197, 1299 |
| StyD4I | CCNGG | 3 cut(s) | 220, 369, 720 |
| StyI | CCWWGG | 2 cut(s) | 1298, 1582 |
| TaaI | ACNGT | 1 cut(s) | 884 |
| TaiI | ACGT | 3 cut(s) | 31, 347, 1263 |
| TaqI | TCGA | 3 cut(s) | 59, 390, 964 |
| TasI | AATT | 7 cut(s) | 44, 659, 791, 836, 1197, 1321, 1495 |
| TatI | WGTACW | 3 cut(s) | 199, 726, 813 |
| TauI | GCSGC | 1 cut(s) | 1553 |
| TfiI | GAWTC | 4 cut(s) | 439, 1271, 1303, 1522 |
| Tru1I | TTAA | 2 cut(s) | 48, 1277 |
| Tru9I | TTAA | 2 cut(s) | 48, 1277 |
| TscAI | CASTG | 2 cut(s) | 251, 1045 |
| TseI | GCWGC | 3 cut(s) | 668, 1167, 1538 |
| TspRI | CASTG | 2 cut(s) | 251, 1045 |
| VpaK11BI | GGWCC | 1 cut(s) | 224 |
| XapI | RAATTY | 2 cut(s) | 44, 791 |
| XceI | RCATGY | 2 cut(s) | 77, 745 |
| XmaJI | CCTAGG | 1 cut(s) | 1298 |
| XmnI | GAANNNNTTC | 2 cut(s) | 189, 1412 |
| XspI | CTAG | 2 cut(s) | 197, 1299 |
| ZrmI | AGTACT | 2 cut(s) | 201, 728 |