RchiOBHm_Chr7g0235801

3'-5' exonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0003918
Physical Location & Seq
Forward (+)
60741764 .. 60748138
6375 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21131

Sequence Viewer

Length: 2919 bp
ATGGGTTTGGAGAAAAAGGTTACCAGAAGCATGCCCAGAAATTACTTGAAGAAATGGAAAGCTCGGAGGCCACTCACAATTTGCAAGCATGGCTTCTTTGACCTGAGTCATGTGTCTCCACTGGTCTTCATCTACCTGTTGAAAGAGTTTTACTCTAGGGGTATGCTACTTTTTCCCCTCACTCTCTGCAAATGTAAGGCAACAAAGAAGTTCCAAGCTCTTGAAGAACAGGTCCATATGGTGCTACACAATGACCCCCAACCTGGACGAGCTACTTTTGTTGTTCAGTGCCTCTATGTCTTACCTATAATTGGAGTGTACTCTGAAGGATTCAGTTATTTAATTATATCCGCTCTTTCTCGTTTCCTAAGAATAGAAGCTTCCATGGGGGACTCTCTGCAAGCAAAAGACCTTGCTGCCCAGTTATTTCTCGACATTGTTGGTGGATTTGTCAACCATGATAACAGGATTGTTGAGAAGATATTTGAAGTTTTTGATGTTCAGTTGGAAAACATTGAGAAAGTGATGCGCCAGAATGCAAAGAATGCTTGCATTTATGACATTGCAAAAAAATTTGTTGAGCAATATATAATTAACTTGATTGAGTCTGAATCATATATGACAGCTGTTAGTCTATTAGAGCACTTCTCTATCCGCCAGTTTGGGAAATCTTTTCTTCTTAGTATGATACGAAGCAAGCAATTTGAGGCAGCAGAAAAATGGGCAACATTCATTGGAAAGCCAATGTTATGTGTTCTTGTCCATGAGTACATTGACAGGGATATGCTAAACAATGCTAAGGAGGTTATGCAGAAAAACAATTTCGTGCAGGATTTCCCTGATATTTATTGCAAGTATGAAGAGAGCTTGCTAAAGAAACTAGCAGATAAAGGATGCTGGGATATGGCAGAAGCAAGGACAAACTGTAATAGGCATCTTCTTGAATATCTGGTTTCTTTAGCAATGGAGGCTGGTTGCTTAGAGAAGGTTGACAAATTATGTGATCGATACTCGCTCAAAGTGCCTGAGCCAAGTCTTCATTGTGTGCATCAGGATGAGGTGCTTGTAGAAGATATCATTTGTGTTGATAAAGTTGATGCTTCTAATGAAGCAACCTGTCAAATTGAGGAATCCAAAGTCGTAGGTCTTGATCATGAATGGAAAGTGTATTATGCAAAAGGAGGTACAAAAAATATGGTTTGTATCATGCCAGTTGCTTCGGGGAAGATGGAGGAAAAGGTTACTAGCAGAAGGCCCAGAAATTACTTAAAGAAGTGGAAATCTCAGAGGCCACTCACCATTTCCAAGCATTGTTTTTCAGACCTGAAGTATATTTCTCCCCCGGTGTTCATCTACCTTTTCAAAGAGTGGTACTTTAGGGGCAAATGTAAGGCAACGAAGAAGTTCCAAGCTCTTGAAGAATGGGTCCATCTAGTACTGCAAAATGATCCCAAACCTGGACGAGCTACTTTTGTTGTTCAGTGCCTCTATATCTTGCATATATTTGGATTACACTCTGAAGGGTTTAGTCATTTAATTATATCTGCCCTTGGTCGCTTCCCAAAAATAGAAACTTCCATGGGGGACTCTTTGAAAGCCAAAGACCTTGCTGCCCAGTTCTTTCTTGACATTGTTAATGGCTTTGTCAACCATGATGAGAGTATAGTTGAGAAGATATTTGAGGTTTTTGATGTTCAGTTGGCAAACATAGAGAAAGTAATGCACCAGAGTGAAAAGAATGATTGCAGTTTTGACATGGCACAAAAGTTTGTTGAGCAATATATTTTTAAGTTGATAGAGTCTGAATCATATATGACTGCAGTTACTCTATTAGAGCACTTCTCTATCCGCCAGTTTGGCAAATCTTTTCTCCTCAGTATGATAGAAAGCAAGCAATTCAAAGCAGCGGACAAATGGGCAACGTTCATCGGAAATCCCATGTTATGTGTTCTTGTCCATGAGTACATCGACAGGAATATGCTAAAGAATGCTATGGAGGTTATGCTGAAAAACAATTTCCAACAGGAATTCCCTGATGTTTATCACAAGTACAAAGAAAGATCACTAAAGAAACTAGCAATAAAAGGATGCTGGGACATTGCAGAATCAAGGACAAAAGGTAATAGGCAACTTCTTGAATATCTGGTTTATTTAGCAATGGAGGCTGGTTACTCAGAGAAGGTTCATGAAATATGTGATCGATACTCACTGGAAGGTCTCTTGAATGTCAAAGTGCCTGAGCCAAGTCTTTGCTATTTGCGTCTCGATGAGCTGGCTGTAGAAGACATCATTTGGGTAGATCAAGTTGATGCTTTACATAACGCAGCCTGTCATATTGAAGAAGCCGAAGTCATAGGTCTTGATTGTGAATGGAGACCAAATTATGAAAAGGGAGGTGAAGAAAATAAAGTTTCTATCATGCAACTTGCTTCTGGGAAGGTGGTTTTCATCCTTGACTTGATCAAGTTATTTGAAGATGTGCCTGATGTCTTGGATGGCTGCTTAACTCGCATTTTTCAGTCTCCTAAGATACTAAAACTTGGTTATGCTTTCGTCTATGATGCAAGGCATCTAGCTGATTCATATGGAGAGTTAAATTGTTTCAATCACTATCAGATGCTTCTGGACATTCAGCATGTATTTAAAGAACAAGGGGGTGGTCTATCTGGGCTTGTACAGAAAATACTGGGAGTTGGTTTGAACAAGACAAGAAGGAACAGCAATTGGGAGCAACGGCCTTTGACACCTAATCAGCTGGAATATGCAGCTATCGATGCAGCTGTACTGCTTCACATATTTGACCGTGTTTGCAGTCATTCTCAAACTGCTGATGGAGAAAGACTTGGAAAACTCGACTGGAAATCCTGCATCTGTCCCCGCTTGGATAACATCAAGAAGTCCAAAAAGGGACACCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_pol_A_exo1

Protein Analysis

972

Amino Acids

112.1

Weight (kDa)

7.0

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 764 - 935 2.1e-20 3'-5' exonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 353
AciI CCGC 5 cut(s) 351, 655, 1849, 1907, 2878
AclI AACGTT 1 cut(s) 1922
AclWI GGATC 1 cut(s) 1442
AcsI RAATTY 2 cut(s) 572, 2027
AcuI CTGAAG 3 cut(s) 345, 1346, 1539
AfaI GTAC 9 cut(s) 320, 770, 1186, 1373, 1437, 1964, 2051, 2676, 2784
AfiI CCNNNNNNNGG 3 cut(s) 263, 311, 1457
AjnI CCWGG 2 cut(s) 262, 1456
AleI CACNNNNGTG 1 cut(s) 1728
Alw21I GWGCWC 2 cut(s) 645, 1839
Alw26I GTCTC 5 cut(s) 120, 2222, 2267, 2368, 2526
AlwI GGATC 1 cut(s) 1442
AoxI GGCC 4 cut(s) 68, 1253, 1289, 2735
ApeKI GCWGC 8 cut(s) 416, 710, 1610, 1904, 2324, 2499, 2765, 2777
ApoI RAATTY 2 cut(s) 572, 2027
Asp700I GAANNNNTTC 1 cut(s) 1403
AspLEI GCGC 1 cut(s) 531
AspS9I GGNCC 3 cut(s) 232, 1254, 1426
AsuC2I CCSGG 1 cut(s) 1343
AsuHPI GGTGA 2 cut(s) 1288, 2408
AvaII GGWCC 2 cut(s) 232, 1426
BbsI GAAGAC 3 cut(s) 118, 1028, 2289
Bbv12I GWGCWC 2 cut(s) 645, 1839
BbvI GCAGC 8 cut(s) 403, 722, 1597, 1916, 2336, 2486, 2777, 2789
BccI CCATC 4 cut(s) 1222, 1437, 2489, 2825
BceAI ACGGC 1 cut(s) 2750
BciT130I CCWGG 2 cut(s) 264, 1458
BclI TGATCA 2 cut(s) 1150, 2460
BcnI CCSGG 1 cut(s) 1343
BcoDI GTCTC 5 cut(s) 120, 2222, 2267, 2368, 2526
BfaI CTAG 6 cut(s) 156, 881, 1245, 1433, 2075, 2573
BfmI CTRYAG 2 cut(s) 1818, 2277
BglI GCCNNNNNGGC 1 cut(s) 1857
BisI GCNGC 8 cut(s) 417, 711, 1611, 1905, 2325, 2500, 2766, 2778
BlsI GCNGC 8 cut(s) 418, 712, 1612, 1906, 2326, 2501, 2767, 2779
BmcAI AGTACT 1 cut(s) 1437
Bme1390I CCNGG 3 cut(s) 264, 1343, 1458
Bme18I GGWCC 2 cut(s) 232, 1426
BmgT120I GGNCC 3 cut(s) 232, 1254, 1426
BmiI GGNNCC 1 cut(s) 1427
BmrFI CCNGG 3 cut(s) 264, 1343, 1458
BmrI ACTGGG 3 cut(s) 415, 1609, 2696
BmuI ACTGGG 3 cut(s) 415, 1609, 2696
BoxI GACNNNNGTC 1 cut(s) 105
BpiI GAAGAC 3 cut(s) 118, 1028, 2289
BplI GAGNNNNNCTC 6 cut(s) 137, 169, 632, 664, 1826, 1858
Bpu10I CCTNAGC 3 cut(s) 798, 1026, 2238
BpuMI CCSGG 1 cut(s) 1343
Bsa29I ATCGAT 3 cut(s) 1006, 2200, 2772
BsaBI GATNNNNATC 1 cut(s) 2040
BsaI GGTCTC 2 cut(s) 2222, 2368
BsaJI CCNNGG 4 cut(s) 384, 1341, 1549, 1578
Bsc4I CCNNNNNNNGG 3 cut(s) 263, 311, 1457
Bse3DI GCAATG 4 cut(s) 561, 969, 2097, 2163
Bse8I GATNNNNATC 1 cut(s) 2040
BseBI CCWGG 2 cut(s) 264, 1458
BseCI ATCGAT 3 cut(s) 1006, 2200, 2772
BseDI CCNNGG 4 cut(s) 384, 1341, 1549, 1578
BseGI GGATG 5 cut(s) 899, 1060, 2093, 2448, 2500
BseJI GATNNNNATC 1 cut(s) 2040
BseLI CCNNNNNNNGG 3 cut(s) 263, 311, 1457
BseMI GCAATG 4 cut(s) 561, 969, 2097, 2163
BseMII CTCAG 6 cut(s) 95, 1017, 1298, 1888, 2187, 2229
BseRI GAGGAG 1 cut(s) 1862
BseXI GCAGC 8 cut(s) 403, 722, 1597, 1916, 2336, 2486, 2777, 2789
BseYI CCCAGC 2 cut(s) 897, 2091
BsgI GTGCAG 1 cut(s) 848
BshFI GGCC 4 cut(s) 70, 1255, 1291, 2737
BshVI ATCGAT 3 cut(s) 1006, 2200, 2772
BsiHKAI GWGCWC 2 cut(s) 645, 1839
BsiSI CCGG 1 cut(s) 1343
BslFI GGGAC 4 cut(s) 404, 1598, 2108, 2859
BslI CCNNNNNNNGG 3 cut(s) 263, 311, 1457
BsmAI GTCTC 5 cut(s) 120, 2222, 2267, 2368, 2526
BsmBI CGTCTC 1 cut(s) 2267
BsmFI GGGAC 4 cut(s) 404, 1598, 2108, 2859
BsmI GAATGC 3 cut(s) 541, 550, 1993
BsnI GGCC 4 cut(s) 70, 1255, 1291, 2737
Bso31I GGTCTC 2 cut(s) 2222, 2368
Bsp1286I GDGCHC 2 cut(s) 645, 1839
Bsp1407I TGTACA 1 cut(s) 2674
Bsp143I GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
Bsp19I CCATGG 2 cut(s) 384, 1578
BspACI CCGC 5 cut(s) 351, 655, 1849, 1907, 2878
BspANI GGCC 4 cut(s) 70, 1255, 1291, 2737
BspCNI CTCAG 6 cut(s) 96, 1018, 1297, 1887, 2186, 2230
BspDI ATCGAT 3 cut(s) 1006, 2200, 2772
BspHI TCATGA 2 cut(s) 1153, 2185
BspLI GGNNCC 1 cut(s) 1427
BspMAI CTGCAG 1 cut(s) 1822
BspPI GGATC 1 cut(s) 1442
BspTNI GGTCTC 2 cut(s) 2222, 2368
BsrBI CCGCTC 1 cut(s) 353
BsrDI GCAATG 4 cut(s) 561, 969, 2097, 2163
BsrGI TGTACA 1 cut(s) 2674
BssECI CCNNGG 4 cut(s) 384, 1341, 1549, 1578
BssMI GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
BssT1I CCWWGG 3 cut(s) 384, 1549, 1578
Bst2UI CCWGG 2 cut(s) 264, 1458
Bst4CI ACNGT 2 cut(s) 926, 2804
Bst6I CTCTTC 1 cut(s) 855
BstAPI GCANNNNNTGC 1 cut(s) 545
BstAUI TGTACA 1 cut(s) 2674
BstC8I GCNNGC 8 cut(s) 32, 86, 402, 550, 698, 869, 1892, 2274
BstDSI CCRYGG 2 cut(s) 384, 1578
BstEII GGTNACC 1 cut(s) 19
BstF5I GGATG 5 cut(s) 899, 1060, 2093, 2448, 2500
BstHHI GCGC 1 cut(s) 531
BstKTI GATC 7 cut(s) 1006, 1153, 1450, 2063, 2200, 2302, 2463
BstMAI GTCTC 5 cut(s) 120, 2222, 2267, 2368, 2526
BstMBI GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
BstMWI GCNNNNNNNGC 8 cut(s) 90, 545, 968, 1021, 1857, 2162, 2508, 2774
BstNI CCWGG 2 cut(s) 264, 1458
BstNSI RCATGY 2 cut(s) 34, 2639
BstPAI GACNNNNGTC 1 cut(s) 105
BstPI GGTNACC 1 cut(s) 19
BstSCI CCNGG 3 cut(s) 262, 1341, 1456
BstSFI CTRYAG 2 cut(s) 1818, 2277
BstV1I GCAGC 8 cut(s) 403, 722, 1597, 1916, 2336, 2486, 2777, 2789
BstV2I GAAGAC 3 cut(s) 118, 1028, 2289
Bsu15I ATCGAT 3 cut(s) 1006, 2200, 2772
BsuRI GGCC 4 cut(s) 70, 1255, 1291, 2737
BsuTUI ATCGAT 3 cut(s) 1006, 2200, 2772
BtgI CCRYGG 2 cut(s) 384, 1578
BtsCI GGATG 5 cut(s) 899, 1060, 2093, 2448, 2500
BtsIMutI CAGTG 4 cut(s) 119, 293, 1487, 2207
Cac8I GCNNGC 8 cut(s) 32, 86, 402, 550, 698, 869, 1892, 2274
CciI TCATGA 2 cut(s) 1153, 2185
CfoI GCGC 1 cut(s) 531
Cfr13I GGNCC 3 cut(s) 232, 1254, 1426
ClaI ATCGAT 3 cut(s) 1006, 2200, 2772
CseI GACGC 1 cut(s) 2249
Csp6I GTAC 9 cut(s) 319, 769, 1185, 1372, 1436, 1963, 2050, 2675, 2783
CviQI GTAC 9 cut(s) 319, 769, 1185, 1372, 1436, 1963, 2050, 2675, 2783
DpnI GATC 7 cut(s) 1005, 1152, 1449, 2062, 2199, 2301, 2462
DpnII GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
DraI TTTAAA 1 cut(s) 2644
Eam1104I CTCTTC 1 cut(s) 855
EarI CTCTTC 1 cut(s) 855
EciI GGCGGA 2 cut(s) 644, 1838
Eco130I CCWWGG 3 cut(s) 384, 1549, 1578
Eco31I GGTCTC 2 cut(s) 2222, 2368
Eco32I GATATC 1 cut(s) 1075
Eco47I GGWCC 2 cut(s) 232, 1426
Eco57I CTGAAG 3 cut(s) 345, 1346, 1539
Eco91I GGTNACC 1 cut(s) 19
EcoO65I GGTNACC 1 cut(s) 19
EcoRI GAATTC 1 cut(s) 2027
EcoRII CCWGG 2 cut(s) 262, 1456
EcoRV GATATC 1 cut(s) 1075
EcoT14I CCWWGG 3 cut(s) 384, 1549, 1578
ErhI CCWWGG 3 cut(s) 384, 1549, 1578
Esp3I CGTCTC 1 cut(s) 2267
FalI AAGNNNNNCTT 2 cut(s) 77, 109
FaqI GGGAC 4 cut(s) 404, 1598, 2108, 2859
FauI CCCGC 1 cut(s) 2885
FauNDI CATATG 2 cut(s) 237, 2584
FbaI TGATCA 2 cut(s) 1150, 2460
Fnu4HI GCNGC 8 cut(s) 417, 711, 1611, 1905, 2325, 2500, 2766, 2778
FokI GGATG 5 cut(s) 906, 1067, 2100, 2435, 2507
Fsp4HI GCNGC 8 cut(s) 417, 711, 1611, 1905, 2325, 2500, 2766, 2778
FspBI CTAG 6 cut(s) 156, 881, 1245, 1433, 2075, 2573
GlaI GCGC 1 cut(s) 530
GluI GCNGC 8 cut(s) 417, 711, 1611, 1905, 2325, 2500, 2766, 2778
GsaI CCCAGC 2 cut(s) 901, 2095
HaeIII GGCC 4 cut(s) 70, 1255, 1291, 2737
HapII CCGG 1 cut(s) 1343
HgaI GACGC 1 cut(s) 2249
HhaI GCGC 1 cut(s) 531
Hin6I GCGC 1 cut(s) 529
HinP1I GCGC 1 cut(s) 529
HincII GTYRAC 3 cut(s) 454, 991, 1648
HindII GTYRAC 3 cut(s) 454, 991, 1648
HindIII AAGCTT 1 cut(s) 378
HpaII CCGG 1 cut(s) 1343
HphI GGTGA 2 cut(s) 1288, 2408
Hpy166II GTNNAC 4 cut(s) 319, 454, 991, 1648
Hpy8I GTNNAC 4 cut(s) 319, 454, 991, 1648
HpyAV CCTTC 8 cut(s) 320, 979, 1245, 1514, 2173, 2207, 2431, 2706
HpyCH4III ACNGT 2 cut(s) 926, 2804
HpyCH4IV ACGT 1 cut(s) 1922
HpyF10VI GCNNNNNNNGC 8 cut(s) 90, 545, 968, 1021, 1857, 2162, 2508, 2774
HpySE526I ACGT 1 cut(s) 1922
HspAI GCGC 1 cut(s) 529
Ksp22I TGATCA 2 cut(s) 1150, 2460
Kzo9I GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
LmnI GCTCC 1 cut(s) 2728
Lsp1109I GCAGC 8 cut(s) 403, 722, 1597, 1916, 2336, 2486, 2777, 2789
MaeI CTAG 6 cut(s) 156, 881, 1245, 1433, 2075, 2573
MaeII ACGT 1 cut(s) 1922
MaeIII GTNAC 4 cut(s) 19, 1240, 1822, 2168
MalI GATC 7 cut(s) 1005, 1152, 1449, 2062, 2199, 2301, 2462
MbiI CCGCTC 1 cut(s) 353
MboI GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
MfeI CAATTG 1 cut(s) 2722
MhlI GDGCHC 2 cut(s) 645, 1839
MlyI GAGTC 5 cut(s) 115, 386, 614, 1580, 1808
MmeI TCCRAC 2 cut(s) 486, 2044
MroXI GAANNNNTTC 1 cut(s) 1403
MseI TTAA 9 cut(s) 341, 594, 1268, 1535, 1635, 1788, 2504, 2594, 2643
MslI CAYNNNNRTG 2 cut(s) 1053, 1728
MspA1I CMGCKG 4 cut(s) 626, 1907, 2755, 2780
MspI CCGG 1 cut(s) 1343
MspR9I CCNGG 3 cut(s) 264, 1343, 1458
MunI CAATTG 1 cut(s) 2722
Mva1269I GAATGC 3 cut(s) 541, 550, 1993
MvaI CCWGG 2 cut(s) 264, 1458
MwoI GCNNNNNNNGC 8 cut(s) 90, 545, 968, 1021, 1857, 2162, 2508, 2774
NciI CCSGG 1 cut(s) 1343
NcoI CCATGG 2 cut(s) 384, 1578
NdeI CATATG 2 cut(s) 237, 2584
NdeII GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
NlaIV GGNNCC 1 cut(s) 1427
NspI RCATGY 2 cut(s) 34, 2639
OliI CACNNNNGTG 1 cut(s) 1728
PaeI GCATGC 1 cut(s) 34
PagI TCATGA 2 cut(s) 1153, 2185
PctI GAATGC 3 cut(s) 541, 550, 1993
PdmI GAANNNNTTC 1 cut(s) 1403
PfeI GAWTC 6 cut(s) 330, 611, 1130, 1805, 2105, 2579
PkrI GCNGC 8 cut(s) 418, 712, 1612, 1906, 2326, 2501, 2767, 2779
PleI GAGTC 5 cut(s) 114, 386, 613, 1580, 1807
PpsI GAGTC 5 cut(s) 114, 386, 613, 1580, 1807
PshAI GACNNNNGTC 1 cut(s) 105
Psp1406I AACGTT 1 cut(s) 1922
Psp6I CCWGG 2 cut(s) 262, 1456
PspEI GGTNACC 1 cut(s) 19
PspFI CCCAGC 2 cut(s) 897, 2091
PspGI CCWGG 2 cut(s) 262, 1456
PspN4I GGNNCC 1 cut(s) 1427
PspPI GGNCC 3 cut(s) 232, 1254, 1426
PstI CTGCAG 1 cut(s) 1822
PvuII CAGCTG 3 cut(s) 626, 2755, 2780
RsaI GTAC 9 cut(s) 320, 770, 1186, 1373, 1437, 1964, 2051, 2676, 2784
RsaNI GTAC 9 cut(s) 319, 769, 1185, 1372, 1436, 1963, 2050, 2675, 2783
RseI CAYNNNNRTG 2 cut(s) 1053, 1728
SaqAI TTAA 9 cut(s) 341, 594, 1268, 1535, 1635, 1788, 2504, 2594, 2643
SatI GCNGC 8 cut(s) 417, 711, 1611, 1905, 2325, 2500, 2766, 2778
Sau3AI GATC 7 cut(s) 1003, 1150, 1447, 2060, 2197, 2299, 2460
Sau96I GGNCC 3 cut(s) 232, 1254, 1426
ScaI AGTACT 1 cut(s) 1437
SchI GAGTC 5 cut(s) 115, 386, 614, 1580, 1808
ScrFI CCNGG 3 cut(s) 264, 1343, 1458
SduI GDGCHC 2 cut(s) 645, 1839
SfcI CTRYAG 2 cut(s) 1818, 2277
SinI GGWCC 2 cut(s) 232, 1426
SmiMI CAYNNNNRTG 2 cut(s) 1053, 1728
SphI GCATGC 1 cut(s) 34
SsiI CCGC 5 cut(s) 351, 655, 1849, 1907, 2878
SspMI CTAG 6 cut(s) 156, 881, 1245, 1433, 2075, 2573
StyD4I CCNGG 3 cut(s) 262, 1341, 1456
StyI CCWWGG 3 cut(s) 384, 1549, 1578
TaaI ACNGT 2 cut(s) 926, 2804
TaiI ACGT 1 cut(s) 1925
TaqI TCGA 7 cut(s) 432, 1006, 1968, 2200, 2265, 2772, 2853
TatI WGTACW 7 cut(s) 318, 768, 1435, 1962, 2049, 2674, 2782
TfiI GAWTC 6 cut(s) 330, 611, 1130, 1805, 2105, 2579
Tru1I TTAA 9 cut(s) 341, 594, 1268, 1535, 1635, 1788, 2504, 2594, 2643
Tru9I TTAA 9 cut(s) 341, 594, 1268, 1535, 1635, 1788, 2504, 2594, 2643
TscAI CASTG 4 cut(s) 126, 293, 1487, 2214
TseI GCWGC 8 cut(s) 416, 710, 1610, 1904, 2324, 2499, 2765, 2777
TspRI CASTG 4 cut(s) 126, 293, 1487, 2214
VpaK11BI GGWCC 2 cut(s) 232, 1426
XapI RAATTY 2 cut(s) 572, 2027
XceI RCATGY 2 cut(s) 34, 2639
XmnI GAANNNNTTC 1 cut(s) 1403
XspI CTAG 6 cut(s) 156, 881, 1245, 1433, 2075, 2573
ZrmI AGTACT 1 cut(s) 1437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.