Rroxscaffold_3G00225620

3'-5' exonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0003918
Physical Location & Seq
Reverse (-)
8908339 .. 8914793
6455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00225620.1

Sequence Viewer

Length: 2892 bp
ATGGGTTTGGAGGAAGAGGTTACCAGAAGCATGCCCAGAAATTACTTAAAGAAATGGAAAGCTCGGAGGCCACTCACAATTTGCAAGCATGGCTTCTTTGACCTGAGTCATGTGTCTCCACTGGTCTTCATCTACCTGTTGAAAGAGTTTAACTCTAGGGGCAAATGTAAGGCAACAAAGAAGTTCCAAGCTCTTGAAAAACAGGTCCATATAGTGCTACACAATGACCCCCAACCTGGACGAGCTACTTTTGTTGTTCAGTGCCTCTATGTCTTACCTATAATTGGAGTGTACTCTGAAGGATTCAGTCATTTAATTATATCCGCTCTTTCTCGTTTCCTAAGAATAGAAGCTTCCATGGGGGACTCTCTGCAAGCAAAGGACCTTGCTGCCCAGTTATTTCTCGACATTGTTGGTGGATTTGTCAACCATGATAACAGGATTGTTGAGAAGATATTTGAAGTTTTTGATGTTCAGTTGGAAAACATTGAGAAAGTAATGCGCCAGAATGCAAAGAATGATTGCATTTATGACATTGCAAAAAAATTTGTTGAGCAATATATAATTAACTTGATTGAGTCTGAATCATATGTGACGGCTGTTAGTCTATTAAAGCACTTCTCTATCCGCCATTTTGGGAAATCTTTTCTTCTTAGAATGATACGAAGCAAGCAATTTGAGGCAGCAGAAAAATGGGCAACATTCATTGGAAAGCCAATGTTATGTGTTCTTGTCCATGAGTACATTGACAGGGATATGCTAAAGAATGCTAAGGAGGTTATGCATAAAAACAATATCGTGCAGGATTTCCCTGATATTTATTGCAAGTATGAAGAGAGCTTGCTAAAGAAACTAGCAGATAAAGGATGCTGGGAGATGGCAGAAGCAAGGACAAACTGTAATAGGCATCTTCTTGAATATCTGGTTTCTTTAGCAATGGAGGCCGGTTGCTTAGAGAAGGTTGATGAATTATGTGATCGATACTCGCTCAATGTGCCTGAGCCAAGTCTTCATTGTGTGCATCAGGATGAGGTGCTTGTAGAGGATATCATTTGTGTTGATAAAGTTGATGCTTCTAATGAAGCAACCTGTCAAATTGAGGAATCCAAAGTCGTAGGTCTTGATCATGAATGGAAAGTGTATTATGTAAAAGGAGGTACAAAAAATATGGTTTGTGTCATGCCAGTTGCTTCGGGGAAGATGGAGGAAAAGGTTACTAGCAGAAGGCCCAGAAATTACTTAAAGAGGTGGAAATCTCAGAGGCCACTCACCATTTCCAAGCATTGTTTTTCAGACCTGAAGTATATTTCTCCCCTGGTGTTCATCTACCTTTTCAAAGAGTGGTACTTTAGGGGCAAATGTAAGGCAACAAAGAAGTTCCAAGCTCTTGAAGAATGGGTCCATCTAGTACTGCAAAATGATCCCAAACCTGGACGAGCTACTTTTGTTGTTCAGTGCCTCTATATCTTGCATATATTTGGATTACACTCTGAAGGGTTTAGTCATTTAATTATATCTGCCCTTGGTCGCTTCCCAAAAATAGAAACTTCCATGGGGGACTCTTTGAAAGCCAAAGACCTTGCTGCCCAGTTCTTTCTTGACATTGTTAATGGCTTTGTCAACCATGATGAGAGGATAGTTGAGAAGATATTTGAGGTTTTTGATGTTCAGTTGGCAAACATAGAGAAAGTAATGCACCAGAGTGAAAAGAATGATTGCAGTTTTGACATGGCACAAAAGTTTGTTGAGCAATATATTTTGAAGTTGATAGAGTCTGAATCATATATGACTGCAGTTACTCTATTAGAGCACTTCTCTATCCGCCAGTTTGGCAAATCTTTTCTCCTCAGTATGATAGAAAGCAAGCAATTCAAAGCAGCGGACAAATGGGCAACGTTCATTGGATATCCCATGTTATGTGTTCTTGTCCATGAGTACATCGACAGGAATATGCTGAAGAATGCTAAGGAGGTTATGCTGAAAAACAATTTCCAACAGGAATTCCCTGATGTTTATCACAAGTACAAAGAAAGATCACTAAAGAAACTAGCAATAAAAGGATGCTGGGACGTTGCAGAATCAAGGACAAAAGGTAATAGGCAACTTCTTGAATATCTGGTTTATTTAGCAATGGAGGCTGGTTACTCAGAGAAGGTTCATGAAATATGTGATCGATACTCACTGGAAGGTCTCTTCAATGTCAAAGTGCCTGAACCAAGTCTTTGCTATTTGCGTCTCGATGAGCTGGCTGTAGAAAACATCATTTGGGTAGATCAAGTTGATGCTTTACATAATGCAGCCTGTCATATTGAAGAAGCCGAAGTCATAGGTCTTGATTGTGAATGGAGACCAAATTATGAAGAGGGAGGTGAAGAAAATAAAGTTTCTATCATGCAACTTGCTTCTGGGAAGGTGGTTTTCATCCTTGACTTGATCAAGTTATTTGAAGATGTGCCTGATGTCCTGGATGACTGCTTAACTCGCATTTTTCAGTCTCCTAAGATACTAAAACTTGGTTATGCTTTCGTCTATGATGCAAGGCATCTAGCTGATTCATATGGAGAGTTAAACTGTTTCAATCACTATCAGATGCTTCTGGACATTCAGCATGTATTTAAAGAACAAGGGGGTGGTCTATCTGGGCTTGTACAGAAAATACTGGGAGTTGGTTTGAACAAGACAAGAAGGAACAGCAATTGGGAGCAACGGCCTTTGACGCCTAATCAGCTGGAATATGCAGCTATCGATGCAGCTGTACTGCTTCACATATTTGACTGTGTTTGCAGTCATTCTCAAACTGCTGATGGAGAAAGACTTGGAAAACTCGACTGGAAATCCTGCATCTGTCCCCGCATGGATAACATCAAGAAGTCCAAAAAGGGACACCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_pol_A_exo1

Protein Analysis

963

Amino Acids

111.24

Weight (kDa)

6.72

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_pol_A_exo1 PF01612 755 - 925 4.4e-20 3'-5' exonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 326
AciI CCGC 5 cut(s) 324, 628, 1822, 1880, 2851
AclI AACGTT 1 cut(s) 1895
AclWI GGATC 1 cut(s) 1415
AcsI RAATTY 2 cut(s) 545, 2000
AcuI CTGAAG 4 cut(s) 318, 1319, 1512, 1976
AcyI GRCGYC 1 cut(s) 2717
AfaI GTAC 9 cut(s) 293, 743, 1159, 1346, 1410, 1937, 2024, 2649, 2757
AfiI CCNNNNNNNGG 3 cut(s) 236, 284, 1430
AjnI CCWGG 4 cut(s) 235, 1314, 1429, 2463
AleI CACNNNNGTG 1 cut(s) 1701
Alw21I GWGCWC 1 cut(s) 1812
Alw26I GTCTC 5 cut(s) 120, 2195, 2240, 2341, 2499
AlwI GGATC 1 cut(s) 1415
AoxI GGCC 5 cut(s) 68, 942, 1226, 1262, 2708
ApeKI GCWGC 7 cut(s) 389, 683, 1583, 1877, 2297, 2738, 2750
ApoI RAATTY 2 cut(s) 545, 2000
AspLEI GCGC 1 cut(s) 504
AspS9I GGNCC 4 cut(s) 205, 382, 1227, 1399
AsuHPI GGTGA 2 cut(s) 1261, 2381
AvaII GGWCC 3 cut(s) 205, 382, 1399
BbsI GAAGAC 2 cut(s) 118, 1001
Bbv12I GWGCWC 1 cut(s) 1812
BbvI GCAGC 7 cut(s) 376, 695, 1570, 1889, 2309, 2750, 2762
BccI CCATC 4 cut(s) 871, 1195, 1410, 2798
BceAI ACGGC 2 cut(s) 612, 2723
BciT130I CCWGG 4 cut(s) 237, 1316, 1431, 2465
BclI TGATCA 2 cut(s) 1123, 2433
BcoDI GTCTC 5 cut(s) 120, 2195, 2240, 2341, 2499
BfaI CTAG 6 cut(s) 156, 854, 1218, 1406, 2048, 2546
BfmI CTRYAG 2 cut(s) 1791, 2250
BglI GCCNNNNNGGC 1 cut(s) 1830
BisI GCNGC 7 cut(s) 390, 684, 1584, 1878, 2298, 2739, 2751
BlsI GCNGC 7 cut(s) 391, 685, 1585, 1879, 2299, 2740, 2752
BmcAI AGTACT 1 cut(s) 1410
Bme1390I CCNGG 4 cut(s) 237, 1316, 1431, 2465
Bme18I GGWCC 3 cut(s) 205, 382, 1399
BmgT120I GGNCC 4 cut(s) 205, 382, 1227, 1399
BmiI GGNNCC 1 cut(s) 1400
BmrFI CCNGG 4 cut(s) 237, 1316, 1431, 2465
BmrI ACTGGG 3 cut(s) 388, 1582, 2669
BmuI ACTGGG 3 cut(s) 388, 1582, 2669
BoxI GACNNNNGTC 1 cut(s) 105
BpiI GAAGAC 2 cut(s) 118, 1001
BplI GAGNNNNNCTC 4 cut(s) 137, 169, 1799, 1831
Bpu10I CCTNAGC 3 cut(s) 771, 999, 1965
Bsa29I ATCGAT 3 cut(s) 979, 2173, 2745
BsaBI GATNNNNATC 1 cut(s) 2013
BsaHI GRCGYC 1 cut(s) 2717
BsaI GGTCTC 2 cut(s) 2195, 2341
BsaJI CCNNGG 4 cut(s) 357, 1314, 1522, 1551
Bsc4I CCNNNNNNNGG 3 cut(s) 236, 284, 1430
Bse118I RCCGGY 1 cut(s) 944
Bse1I ACTGG 9 cut(s) 126, 394, 1184, 1588, 1825, 2187, 2664, 2834, 2887
Bse3DI GCAATG 3 cut(s) 534, 942, 2136
Bse8I GATNNNNATC 1 cut(s) 2013
BseBI CCWGG 4 cut(s) 237, 1316, 1431, 2465
BseCI ATCGAT 3 cut(s) 979, 2173, 2745
BseDI CCNNGG 4 cut(s) 357, 1314, 1522, 1551
BseGI GGATG 5 cut(s) 872, 1033, 2066, 2421, 2473
BseJI GATNNNNATC 1 cut(s) 2013
BseLI CCNNNNNNNGG 3 cut(s) 236, 284, 1430
BseMI GCAATG 3 cut(s) 534, 942, 2136
BseMII CTCAG 5 cut(s) 95, 990, 1271, 1861, 2160
BseNI ACTGG 9 cut(s) 126, 394, 1184, 1588, 1825, 2187, 2664, 2834, 2887
BseRI GAGGAG 1 cut(s) 1835
BseXI GCAGC 7 cut(s) 376, 695, 1570, 1889, 2309, 2750, 2762
BseYI CCCAGC 2 cut(s) 870, 2064
BsgI GTGCAG 1 cut(s) 821
BshFI GGCC 5 cut(s) 70, 944, 1228, 1264, 2710
BshVI ATCGAT 3 cut(s) 979, 2173, 2745
BsiHKAI GWGCWC 1 cut(s) 1812
BsiSI CCGG 1 cut(s) 945
BslFI GGGAC 4 cut(s) 377, 1571, 2081, 2832
BslI CCNNNNNNNGG 3 cut(s) 236, 284, 1430
BsmAI GTCTC 5 cut(s) 120, 2195, 2240, 2341, 2499
BsmBI CGTCTC 1 cut(s) 2240
BsmFI GGGAC 4 cut(s) 377, 1571, 2081, 2832
BsmI GAATGC 3 cut(s) 514, 772, 1966
BsnI GGCC 5 cut(s) 70, 944, 1228, 1264, 2710
Bso31I GGTCTC 2 cut(s) 2195, 2341
Bsp1286I GDGCHC 1 cut(s) 1812
Bsp1407I TGTACA 1 cut(s) 2647
Bsp143I GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
Bsp19I CCATGG 2 cut(s) 357, 1551
BspACI CCGC 5 cut(s) 324, 628, 1822, 1880, 2851
BspANI GGCC 5 cut(s) 70, 944, 1228, 1264, 2710
BspCNI CTCAG 5 cut(s) 96, 991, 1270, 1860, 2159
BspDI ATCGAT 3 cut(s) 979, 2173, 2745
BspHI TCATGA 2 cut(s) 1126, 2158
BspLI GGNNCC 1 cut(s) 1400
BspMAI CTGCAG 1 cut(s) 1795
BspPI GGATC 1 cut(s) 1415
BspTNI GGTCTC 2 cut(s) 2195, 2341
BsrBI CCGCTC 1 cut(s) 326
BsrDI GCAATG 3 cut(s) 534, 942, 2136
BsrFI RCCGGY 1 cut(s) 944
BsrGI TGTACA 1 cut(s) 2647
BsrI ACTGG 9 cut(s) 126, 394, 1184, 1588, 1825, 2187, 2664, 2834, 2887
BssAI RCCGGY 1 cut(s) 944
BssECI CCNNGG 4 cut(s) 357, 1314, 1522, 1551
BssMI GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
BssNI GRCGYC 1 cut(s) 2717
BssT1I CCWWGG 3 cut(s) 357, 1522, 1551
Bst2UI CCWGG 4 cut(s) 237, 1316, 1431, 2465
Bst4CI ACNGT 3 cut(s) 899, 2573, 2777
Bst6I CTCTTC 4 cut(s) 9, 828, 2198, 2355
BstACI GRCGYC 1 cut(s) 2717
BstAUI TGTACA 1 cut(s) 2647
BstC8I GCNNGC 7 cut(s) 32, 86, 375, 671, 842, 1865, 2247
BstDSI CCRYGG 2 cut(s) 357, 1551
BstEII GGTNACC 1 cut(s) 19
BstF5I GGATG 5 cut(s) 872, 1033, 2066, 2421, 2473
BstHHI GCGC 1 cut(s) 504
BstKTI GATC 7 cut(s) 979, 1126, 1423, 2036, 2173, 2275, 2436
BstMAI GTCTC 5 cut(s) 120, 2195, 2240, 2341, 2499
BstMBI GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
BstMWI GCNNNNNNNGC 9 cut(s) 90, 941, 994, 1830, 2135, 2481, 2716, 2725, 2747
BstNI CCWGG 4 cut(s) 237, 1316, 1431, 2465
BstNSI RCATGY 2 cut(s) 34, 2612
BstPAI GACNNNNGTC 1 cut(s) 105
BstPI GGTNACC 1 cut(s) 19
BstSCI CCNGG 4 cut(s) 235, 1314, 1429, 2463
BstSFI CTRYAG 2 cut(s) 1791, 2250
BstV1I GCAGC 7 cut(s) 376, 695, 1570, 1889, 2309, 2750, 2762
BstV2I GAAGAC 2 cut(s) 118, 1001
Bsu15I ATCGAT 3 cut(s) 979, 2173, 2745
BsuRI GGCC 5 cut(s) 70, 944, 1228, 1264, 2710
BsuTUI ATCGAT 3 cut(s) 979, 2173, 2745
BtgI CCRYGG 2 cut(s) 357, 1551
BtsCI GGATG 5 cut(s) 872, 1033, 2066, 2421, 2473
BtsIMutI CAGTG 4 cut(s) 119, 266, 1460, 2180
Cac8I GCNNGC 7 cut(s) 32, 86, 375, 671, 842, 1865, 2247
CciI TCATGA 2 cut(s) 1126, 2158
CfoI GCGC 1 cut(s) 504
Cfr10I RCCGGY 1 cut(s) 944
Cfr13I GGNCC 4 cut(s) 205, 382, 1227, 1399
ClaI ATCGAT 3 cut(s) 979, 2173, 2745
CseI GACGC 2 cut(s) 2222, 2725
Csp6I GTAC 9 cut(s) 292, 742, 1158, 1345, 1409, 1936, 2023, 2648, 2756
CviQI GTAC 9 cut(s) 292, 742, 1158, 1345, 1409, 1936, 2023, 2648, 2756
DpnI GATC 7 cut(s) 978, 1125, 1422, 2035, 2172, 2274, 2435
DpnII GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
DraI TTTAAA 1 cut(s) 2617
Eam1104I CTCTTC 4 cut(s) 9, 828, 2198, 2355
EarI CTCTTC 4 cut(s) 9, 828, 2198, 2355
EciI GGCGGA 2 cut(s) 617, 1811
Eco130I CCWWGG 3 cut(s) 357, 1522, 1551
Eco31I GGTCTC 2 cut(s) 2195, 2341
Eco32I GATATC 2 cut(s) 1048, 1907
Eco47I GGWCC 3 cut(s) 205, 382, 1399
Eco57I CTGAAG 4 cut(s) 318, 1319, 1512, 1976
Eco91I GGTNACC 1 cut(s) 19
EcoO109I RGGNCCY 1 cut(s) 382
EcoO65I GGTNACC 1 cut(s) 19
EcoRI GAATTC 1 cut(s) 2000
EcoRII CCWGG 4 cut(s) 235, 1314, 1429, 2463
EcoRV GATATC 2 cut(s) 1048, 1907
EcoT14I CCWWGG 3 cut(s) 357, 1522, 1551
EcoT22I ATGCAT 1 cut(s) 786
ErhI CCWWGG 3 cut(s) 357, 1522, 1551
Esp3I CGTCTC 1 cut(s) 2240
FalI AAGNNNNNCTT 2 cut(s) 77, 109
FaqI GGGAC 4 cut(s) 377, 1571, 2081, 2832
FauI CCCGC 1 cut(s) 2858
FauNDI CATATG 2 cut(s) 589, 2557
FbaI TGATCA 2 cut(s) 1123, 2433
Fnu4HI GCNGC 7 cut(s) 390, 684, 1584, 1878, 2298, 2739, 2751
FokI GGATG 5 cut(s) 879, 1040, 2073, 2408, 2480
Fsp4HI GCNGC 7 cut(s) 390, 684, 1584, 1878, 2298, 2739, 2751
FspBI CTAG 6 cut(s) 156, 854, 1218, 1406, 2048, 2546
GlaI GCGC 1 cut(s) 503
GluI GCNGC 7 cut(s) 390, 684, 1584, 1878, 2298, 2739, 2751
GsaI CCCAGC 2 cut(s) 874, 2068
HaeIII GGCC 5 cut(s) 70, 944, 1228, 1264, 2710
HapII CCGG 1 cut(s) 945
HgaI GACGC 2 cut(s) 2222, 2725
HhaI GCGC 1 cut(s) 504
Hin1I GRCGYC 1 cut(s) 2717
Hin6I GCGC 1 cut(s) 502
HinP1I GCGC 1 cut(s) 502
HincII GTYRAC 2 cut(s) 427, 1621
HindII GTYRAC 2 cut(s) 427, 1621
HindIII AAGCTT 1 cut(s) 351
HpaII CCGG 1 cut(s) 945
HphI GGTGA 2 cut(s) 1261, 2381
Hpy166II GTNNAC 3 cut(s) 292, 427, 1621
Hpy188I TCNGA 9 cut(s) 66, 298, 583, 1260, 1294, 1492, 1777, 2149, 2589
Hpy8I GTNNAC 3 cut(s) 292, 427, 1621
HpyAV CCTTC 8 cut(s) 293, 952, 1218, 1487, 2146, 2180, 2404, 2679
HpyCH4III ACNGT 3 cut(s) 899, 2573, 2777
HpyCH4IV ACGT 2 cut(s) 1895, 2070
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 941, 994, 1830, 2135, 2481, 2716, 2725, 2747
HpySE526I ACGT 2 cut(s) 1895, 2070
Hsp92I GRCGYC 1 cut(s) 2717
HspAI GCGC 1 cut(s) 502
Ksp22I TGATCA 2 cut(s) 1123, 2433
Kzo9I GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
LmnI GCTCC 1 cut(s) 2701
Lsp1109I GCAGC 7 cut(s) 376, 695, 1570, 1889, 2309, 2750, 2762
MaeI CTAG 6 cut(s) 156, 854, 1218, 1406, 2048, 2546
MaeII ACGT 2 cut(s) 1895, 2070
MaeIII GTNAC 5 cut(s) 19, 592, 1213, 1795, 2141
MalI GATC 7 cut(s) 978, 1125, 1422, 2035, 2172, 2274, 2435
MbiI CCGCTC 1 cut(s) 326
MboI GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
MfeI CAATTG 1 cut(s) 2695
MhlI GDGCHC 1 cut(s) 1812
MlyI GAGTC 5 cut(s) 115, 359, 587, 1553, 1781
MmeI TCCRAC 2 cut(s) 459, 2017
Mph1103I ATGCAT 1 cut(s) 786
MslI CAYNNNNRTG 2 cut(s) 1026, 1701
MspA1I CMGCKG 3 cut(s) 1880, 2728, 2753
MspI CCGG 1 cut(s) 945
MspR9I CCNGG 4 cut(s) 237, 1316, 1431, 2465
MunI CAATTG 1 cut(s) 2695
Mva1269I GAATGC 3 cut(s) 514, 772, 1966
MvaI CCWGG 4 cut(s) 237, 1316, 1431, 2465
MwoI GCNNNNNNNGC 9 cut(s) 90, 941, 994, 1830, 2135, 2481, 2716, 2725, 2747
NcoI CCATGG 2 cut(s) 357, 1551
NdeI CATATG 2 cut(s) 589, 2557
NdeII GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
NlaIV GGNNCC 1 cut(s) 1400
NmuCI GTSAC 1 cut(s) 592
NsiI ATGCAT 1 cut(s) 786
NspI RCATGY 2 cut(s) 34, 2612
OliI CACNNNNGTG 1 cut(s) 1701
PaeI GCATGC 1 cut(s) 34
PagI TCATGA 2 cut(s) 1126, 2158
PctI GAATGC 3 cut(s) 514, 772, 1966
PfeI GAWTC 6 cut(s) 303, 584, 1103, 1778, 2078, 2552
PfoI TCCNGGA 1 cut(s) 2463
PkrI GCNGC 7 cut(s) 391, 685, 1585, 1879, 2299, 2740, 2752
PleI GAGTC 5 cut(s) 114, 359, 586, 1553, 1780
PpsI GAGTC 5 cut(s) 114, 359, 586, 1553, 1780
PpuMI RGGWCCY 1 cut(s) 382
PshAI GACNNNNGTC 1 cut(s) 105
Psp1406I AACGTT 1 cut(s) 1895
Psp5II RGGWCCY 1 cut(s) 382
Psp6I CCWGG 4 cut(s) 235, 1314, 1429, 2463
PspEI GGTNACC 1 cut(s) 19
PspFI CCCAGC 2 cut(s) 870, 2064
PspGI CCWGG 4 cut(s) 235, 1314, 1429, 2463
PspN4I GGNNCC 1 cut(s) 1400
PspPI GGNCC 4 cut(s) 205, 382, 1227, 1399
PspPPI RGGWCCY 1 cut(s) 382
PstI CTGCAG 1 cut(s) 1795
PvuII CAGCTG 2 cut(s) 2728, 2753
RsaI GTAC 9 cut(s) 293, 743, 1159, 1346, 1410, 1937, 2024, 2649, 2757
RsaNI GTAC 9 cut(s) 292, 742, 1158, 1345, 1409, 1936, 2023, 2648, 2756
RseI CAYNNNNRTG 2 cut(s) 1026, 1701
SatI GCNGC 7 cut(s) 390, 684, 1584, 1878, 2298, 2739, 2751
Sau3AI GATC 7 cut(s) 976, 1123, 1420, 2033, 2170, 2272, 2433
Sau96I GGNCC 4 cut(s) 205, 382, 1227, 1399
ScaI AGTACT 1 cut(s) 1410
SchI GAGTC 5 cut(s) 115, 359, 587, 1553, 1781
ScrFI CCNGG 4 cut(s) 237, 1316, 1431, 2465
SduI GDGCHC 1 cut(s) 1812
SfcI CTRYAG 2 cut(s) 1791, 2250
SinI GGWCC 3 cut(s) 205, 382, 1399
SmiMI CAYNNNNRTG 2 cut(s) 1026, 1701
SphI GCATGC 1 cut(s) 34
SsiI CCGC 5 cut(s) 324, 628, 1822, 1880, 2851
SspMI CTAG 6 cut(s) 156, 854, 1218, 1406, 2048, 2546
StyD4I CCNGG 4 cut(s) 235, 1314, 1429, 2463
StyI CCWWGG 3 cut(s) 357, 1522, 1551
TaaI ACNGT 3 cut(s) 899, 2573, 2777
TaiI ACGT 2 cut(s) 1898, 2073
TaqI TCGA 7 cut(s) 405, 979, 1941, 2173, 2238, 2745, 2826
TatI WGTACW 7 cut(s) 291, 741, 1408, 1935, 2022, 2647, 2755
TfiI GAWTC 6 cut(s) 303, 584, 1103, 1778, 2078, 2552
TscAI CASTG 4 cut(s) 126, 266, 1460, 2187
TseFI GTSAC 1 cut(s) 592
TseI GCWGC 7 cut(s) 389, 683, 1583, 1877, 2297, 2738, 2750
Tsp45I GTSAC 1 cut(s) 592
TspRI CASTG 4 cut(s) 126, 266, 1460, 2187
VpaK11BI GGWCC 3 cut(s) 205, 382, 1399
XapI RAATTY 2 cut(s) 545, 2000
XceI RCATGY 2 cut(s) 34, 2612
XspI CTAG 6 cut(s) 156, 854, 1218, 1406, 2048, 2546
ZrmI AGTACT 1 cut(s) 1410
Zsp2I ATGCAT 1 cut(s) 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.