Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007844

Physical Location & Seq

Genomic Coordinates Forward (+)

8145257 .. 8149769

Gene Structure 4513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G045500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGGAGGCGTTACCCATCCCCACAGACACGTTCAAGCTAGGGTTCATCGGAGCAGGTAAAATGGCGGAGAGCATCGCCAGAGGGATCGTCCGATCGGGCGTTCTGCCTCCAAATCGTATCTCTACGTTCCACGCTAACCCCATTCGACGCCAAGCCTTCGAGTCCTTCGGCGTCGAGCTCCTCCACAAAAACGACGACGTGGTGGAAGATAGTGATATCGTCATTTTCTCTGTCAAACCTCAAGTTGTTAAAGATGTAGTTTTGCAGTTGAGGCCACTGCTTTCCAAAAAGAAGCTGCTAGTTTCAATTGCTGCTGGAGTCAAATTGAAAGATCTGCAGGAGTGGGCTGGTAACAGCCGATTTATTAGGGTAATGCCAAACACTCCTTCTGCTGTTGGTGAGGCAGCATCAGTTATGAGCTTGGGAGTAGGTGCAACAGAACAAGATGGAGACCTAATAGCTAAATTATTTGGATCAGTAGGAAAGACGTGGAAAGCTGATGAAAAATTGTTTGATGCAGTTACTGGCGTTAGTGGCAGTGGTCCTGCATATATATATTTGGCGATAGAGGCTTTGGCAGATGGAGGAGTTGCTGCAGGTCTACCTCGAGAACTTGCACTGGGTCTAGCATCTCAAACTGTATTAGGAGCAGCATCTATGGTTACTAGTACTGGGAAGCATCCAGGTCAGCTAAAGGATGATGTAACATCACCTGCTGGAACTACTATTGCTGGCATTCATGAGCTGGAGAAGGGCGGGTTTCGTGGAATATTGATGAATGCAGTCCTCGCTGCTGCCAGACGCAGCCGAGAATTTTCGCAGAGCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004735 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009651 GO:0016491 GO:0016645 GO:0016646 GO:0030312 GO:0044424 GO:0044464 GO:0050896 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 ko01110 ko01130 ko01230 map00330 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

F420_oxidored P5CR_dimer

Protein Analysis

277

Amino Acids

29.02

Weight (kDa)

8.75

Isoelectric Point (pI)

35.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007844)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14800 AT5G14800
fragaria_vesca	FvH4_6g25150 FvH4_6g25150
malus_domestica	MD12G1094200.v1.1 MD14G1084400.v1.1
prunus_persica	Prupe.7G045500_v2.0.a1
pyrus_communis	pycom12g07740 pycom14g07410
rosa_chinensis	RchiOBHm_Chr1g0334171
rosa_laevigata	RLG00000018843 RLG00000029473
rosa_multiflora	Rmu_sc0008928.1_g000001
rosa_roxburghii	Rroxscaffold_2G00118320 Rroxscaffold_4G00316950
rosa_rugosa	Rorug01G0113100 Rorug02G0255000
rosa_samantha	Rh1AG137200 Rh1BG104500 Rh1CG129400 Rh1DG142200 Rh2AG313600
rosa_wichuraiana	Rw1G011400 Rw2G025340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	721
Acc36I	ACCTGC	3 cut(s)	44, 587, 721
AccI	GTMKAC	1 cut(s)	601
AciI	CCGC	2 cut(s)	65, 756
AclWI	GGATC	2 cut(s)	92, 481
AcsI	RAATTY	1 cut(s)	812
AcyI	GRCGYC	2 cut(s)	148, 171
AfaI	GTAC	1 cut(s)	670
AflIII	ACRYGT	1 cut(s)	27
AgsI	TTSAA	3 cut(s)	34, 306, 328
AhlI	ACTAGT	1 cut(s)	665
AjiI	CACGTC	2 cut(s)	199, 489
AjnI	CCWGG	1 cut(s)	682
AjuI	GAANNNNNNNTTGG	2 cut(s)	370, 402
AluBI	AGCT	8 cut(s)	37, 178, 295, 420, 461, 497, 691, 745
AluI	AGCT	8 cut(s)	37, 178, 295, 420, 461, 497, 691, 745
Alw21I	GWGCWC	1 cut(s)	180
Alw26I	GTCTC	1 cut(s)	444
AlwI	GGATC	2 cut(s)	92, 481
AlwNI	CAGNNNCTG	1 cut(s)	524
Ama87I	CYCGRG	1 cut(s)	606
AoxI	GGCC	1 cut(s)	272
ApeKI	GCWGC	8 cut(s)	295, 311, 404, 593, 650, 791, 794, 804
ApoI	RAATTY	1 cut(s)	812
AspS9I	GGNCC	1 cut(s)	542
AsuHPI	GGTGA	2 cut(s)	410, 702
AvaI	CYCGRG	1 cut(s)	606
AvaII	GGWCC	1 cut(s)	542
BanII	GRGCYC	1 cut(s)	180
Bbv12I	GWGCWC	1 cut(s)	180
BbvI	GCAGC	8 cut(s)	282, 298, 416, 580, 662, 778, 781, 816
BccI	CCATC	3 cut(s)	23, 440, 575
BciT130I	CCWGG	1 cut(s)	684
BcoDI	GTCTC	1 cut(s)	444
BcuI	ACTAGT	1 cut(s)	665
BfaI	CTAG	4 cut(s)	38, 299, 626, 666
BfmI	CTRYAG	2 cut(s)	335, 594
BfuAI	ACCTGC	3 cut(s)	44, 587, 721
BglII	AGATCT	1 cut(s)	331
BisI	GCNGC	8 cut(s)	296, 312, 405, 594, 651, 792, 795, 805
BlsI	GCNGC	8 cut(s)	297, 313, 406, 595, 652, 793, 796, 806
BmcAI	AGTACT	1 cut(s)	670
Bme1390I	CCNGG	1 cut(s)	684
Bme18I	GGWCC	1 cut(s)	542
BmeT110I	CYCGRG	1 cut(s)	606
BmgBI	CACGTC	2 cut(s)	199, 489
BmgT120I	GGNCC	1 cut(s)	542
BmrFI	CCNGG	1 cut(s)	684
BmrI	ACTGGG	2 cut(s)	629, 681
BmsI	GCATC	6 cut(s)	81, 416, 505, 638, 662, 688
BmuI	ACTGGG	2 cut(s)	629, 681
BpmI	CTGGAG	2 cut(s)	336, 767
BpuEI	CTTGAG	1 cut(s)	225
BsaHI	GRCGYC	2 cut(s)	148, 171
BsaI	GGTCTC	1 cut(s)	444
Bse1I	ACTGG	4 cut(s)	529, 624, 676, 826
BseBI	CCWGG	1 cut(s)	684
BseGI	GGATG	3 cut(s)	15, 679, 703
BseNI	ACTGG	4 cut(s)	529, 624, 676, 826
BseRI	GAGGAG	2 cut(s)	170, 600
BseXI	GCAGC	8 cut(s)	282, 298, 416, 580, 662, 778, 781, 816
Bsh1285I	CGRYCG	1 cut(s)	95
BshFI	GGCC	1 cut(s)	274
BsiEI	CGRYCG	1 cut(s)	95
BsiHKAI	GWGCWC	1 cut(s)	180
BsiHKCI	CYCGRG	1 cut(s)	606
BsmAI	GTCTC	1 cut(s)	444
BsmI	GAATGC	2 cut(s)	735, 784
BsnI	GGCC	1 cut(s)	274
Bso31I	GGTCTC	1 cut(s)	444
BsoBI	CYCGRG	1 cut(s)	606
Bsp1286I	GDGCHC	1 cut(s)	180
Bsp143I	GATC	4 cut(s)	84, 92, 331, 473
BspACI	CCGC	2 cut(s)	65, 756
BspANI	GGCC	1 cut(s)	274
BspHI	TCATGA	1 cut(s)	739
BspMAI	CTGCAG	2 cut(s)	339, 598
BspMI	ACCTGC	3 cut(s)	44, 587, 721
BspPI	GGATC	2 cut(s)	92, 481
BspTNI	GGTCTC	1 cut(s)	444
BsrI	ACTGG	4 cut(s)	529, 624, 676, 826
BssMI	GATC	4 cut(s)	84, 92, 331, 473
BssNI	GRCGYC	2 cut(s)	148, 171
Bst2UI	CCWGG	1 cut(s)	684
Bst4CI	ACNGT	1 cut(s)	640
BstACI	GRCGYC	2 cut(s)	148, 171
BstC8I	GCNNGC	1 cut(s)	733
BstF5I	GGATG	3 cut(s)	15, 679, 703
BstKTI	GATC	4 cut(s)	87, 95, 334, 476
BstMAI	GTCTC	1 cut(s)	444
BstMBI	GATC	4 cut(s)	84, 92, 331, 473
BstMCI	CGRYCG	1 cut(s)	95
BstMWI	GCNNNNNNNGC	4 cut(s)	271, 534, 569, 788
BstNI	CCWGG	1 cut(s)	684
BstSCI	CCNGG	1 cut(s)	682
BstSFI	CTRYAG	2 cut(s)	335, 594
BstV1I	GCAGC	8 cut(s)	282, 298, 416, 580, 662, 778, 781, 816
BstX2I	RGATCY	1 cut(s)	331
BstYI	RGATCY	1 cut(s)	331
BsuRI	GGCC	1 cut(s)	274
BtgZI	GCGATG	1 cut(s)	58
BtrI	CACGTC	2 cut(s)	199, 489
BtsCI	GGATG	3 cut(s)	15, 679, 703
BtsI	GCAGTG	2 cut(s)	275, 544
BtsIMutI	CAGTG	3 cut(s)	275, 544, 617
BveI	ACCTGC	3 cut(s)	44, 587, 721
Cac8I	GCNNGC	1 cut(s)	733
CaiI	CAGNNNCTG	1 cut(s)	524
CciI	TCATGA	1 cut(s)	739
Cfr13I	GGNCC	1 cut(s)	542
CseI	GACGC	3 cut(s)	156, 160, 810
Csp6I	GTAC	1 cut(s)	669
CviAII	CATG	1 cut(s)	740
CviQI	GTAC	1 cut(s)	669
DpnI	GATC	4 cut(s)	86, 94, 333, 475
DpnII	GATC	4 cut(s)	84, 92, 331, 473
EciI	GGCGGA	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	178
Eco24I	GRGCYC	1 cut(s)	180
Eco31I	GGTCTC	1 cut(s)	444
Eco32I	GATATC	1 cut(s)	217
Eco47I	GGWCC	1 cut(s)	542
Eco53kI	GAGCTC	1 cut(s)	178
Eco88I	CYCGRG	1 cut(s)	606
EcoICRI	GAGCTC	1 cut(s)	178
EcoRII	CCWGG	1 cut(s)	682
EcoRV	GATATC	1 cut(s)	217
EcoT38I	GRGCYC	1 cut(s)	180
FaeI	CATG	1 cut(s)	743
FaiI	YATR	7 cut(s)	416, 550, 552, 554, 556, 659, 741
FatI	CATG	1 cut(s)	739
FauI	CCCGC	1 cut(s)	749
FblI	GTMKAC	1 cut(s)	601
Fnu4HI	GCNGC	8 cut(s)	296, 312, 405, 594, 651, 792, 795, 805
FokI	GGATG	3 cut(s)	2, 666, 710
FriOI	GRGCYC	1 cut(s)	180
Fsp4HI	GCNGC	8 cut(s)	296, 312, 405, 594, 651, 792, 795, 805
FspBI	CTAG	4 cut(s)	38, 299, 626, 666
GluI	GCNGC	8 cut(s)	296, 312, 405, 594, 651, 792, 795, 805
GsuI	CTGGAG	2 cut(s)	336, 767
HaeIII	GGCC	1 cut(s)	274
HgaI	GACGC	3 cut(s)	156, 160, 810
Hin1I	GRCGYC	2 cut(s)	148, 171
Hin1II	CATG	1 cut(s)	743
HinfI	GANTC	2 cut(s)	161, 318
HphI	GGTGA	2 cut(s)	410, 702
Hpy166II	GTNNAC	1 cut(s)	602
Hpy188I	TCNGA	2 cut(s)	50, 92
Hpy188III	TCNNGA	2 cut(s)	608, 740
Hpy8I	GTNNAC	1 cut(s)	602
Hpy99I	CGWCG	4 cut(s)	150, 176, 197, 200
HpyAV	CCTTC	4 cut(s)	166, 175, 396, 745
HpyCH4III	ACNGT	1 cut(s)	640
HpyCH4IV	ACGT	4 cut(s)	29, 125, 198, 488
HpyCH4V	TGCA	8 cut(s)	265, 337, 434, 518, 548, 596, 617, 782
HpyF10VI	GCNNNNNNNGC	4 cut(s)	271, 534, 569, 788
HpySE526I	ACGT	4 cut(s)	29, 125, 198, 488
Hsp92I	GRCGYC	2 cut(s)	148, 171
Hsp92II	CATG	1 cut(s)	743
Kzo9I	GATC	4 cut(s)	84, 92, 331, 473
LmnI	GCTCC	3 cut(s)	50, 183, 647
Lsp1109I	GCAGC	8 cut(s)	282, 298, 416, 580, 662, 778, 781, 816
LweI	GCATC	6 cut(s)	81, 416, 505, 638, 662, 688
MaeI	CTAG	4 cut(s)	38, 299, 626, 666
MaeII	ACGT	4 cut(s)	29, 125, 198, 488
MaeIII	GTNAC	5 cut(s)	9, 350, 520, 661, 703
MalI	GATC	4 cut(s)	86, 94, 333, 475
MboI	GATC	4 cut(s)	84, 92, 331, 473
MboII	GAAGA	1 cut(s)	218
MfeI	CAATTG	1 cut(s)	306
MflI	RGATCY	1 cut(s)	331
MhlI	GDGCHC	1 cut(s)	180
MluCI	AATT	5 cut(s)	306, 323, 464, 506, 812
MlyI	GAGTC	2 cut(s)	170, 327
MseI	TTAA	1 cut(s)	249
MspR9I	CCNGG	1 cut(s)	684
MunI	CAATTG	1 cut(s)	306
Mva1269I	GAATGC	2 cut(s)	735, 784
MvaI	CCWGG	1 cut(s)	684
MwoI	GCNNNNNNNGC	4 cut(s)	271, 534, 569, 788
NdeII	GATC	4 cut(s)	84, 92, 331, 473
NlaIII	CATG	1 cut(s)	743
PaeR7I	CTCGAG	1 cut(s)	606
PagI	TCATGA	1 cut(s)	739
PaqCI	CACCTGC	1 cut(s)	721
PctI	GAATGC	2 cut(s)	735, 784
PkrI	GCNGC	8 cut(s)	297, 313, 406, 595, 652, 793, 796, 806
Ple19I	CGATCG	1 cut(s)	95
PleI	GAGTC	2 cut(s)	169, 326
PpsI	GAGTC	2 cut(s)	169, 326
Psp124BI	GAGCTC	1 cut(s)	180
Psp6I	CCWGG	1 cut(s)	682
PspGI	CCWGG	1 cut(s)	682
PspPI	GGNCC	1 cut(s)	542
PstI	CTGCAG	2 cut(s)	339, 598
PstNI	CAGNNNCTG	1 cut(s)	524
PsuI	RGATCY	1 cut(s)	331
PvuI	CGATCG	1 cut(s)	95
RsaI	GTAC	1 cut(s)	670
RsaNI	GTAC	1 cut(s)	669
SacI	GAGCTC	1 cut(s)	180
SaqAI	TTAA	1 cut(s)	249
SatI	GCNGC	8 cut(s)	296, 312, 405, 594, 651, 792, 795, 805
Sau3AI	GATC	4 cut(s)	84, 92, 331, 473
Sau96I	GGNCC	1 cut(s)	542
ScaI	AGTACT	1 cut(s)	670
SchI	GAGTC	2 cut(s)	170, 327
ScrFI	CCNGG	1 cut(s)	684
SduI	GDGCHC	1 cut(s)	180
SfaNI	GCATC	6 cut(s)	81, 416, 505, 638, 662, 688
SfcI	CTRYAG	2 cut(s)	335, 594
Sfr274I	CTCGAG	1 cut(s)	606
SinI	GGWCC	1 cut(s)	542
SlaI	CTCGAG	1 cut(s)	606
SmlI	CTYRAG	2 cut(s)	240, 606
SmoI	CTYRAG	2 cut(s)	240, 606
SpeI	ACTAGT	1 cut(s)	665
Sse9I	AATT	5 cut(s)	306, 323, 464, 506, 812
SsiI	CCGC	2 cut(s)	65, 756
SspI	AATATT	1 cut(s)	771
SspMI	CTAG	4 cut(s)	38, 299, 626, 666
SstI	GAGCTC	1 cut(s)	180
StyD4I	CCNGG	1 cut(s)	682
TaaI	ACNGT	1 cut(s)	640
TaiI	ACGT	4 cut(s)	32, 128, 201, 491
TaqI	TCGA	4 cut(s)	145, 159, 174, 607
TasI	AATT	5 cut(s)	306, 323, 464, 506, 812
TatI	WGTACW	1 cut(s)	668
Tru1I	TTAA	1 cut(s)	249
Tru9I	TTAA	1 cut(s)	249
TscAI	CASTG	3 cut(s)	282, 544, 624
TseI	GCWGC	8 cut(s)	295, 311, 404, 593, 650, 791, 794, 804
TspDTI	ATGAA	4 cut(s)	34, 516, 728, 791
TspRI	CASTG	3 cut(s)	282, 544, 624
VpaK11BI	GGWCC	1 cut(s)	542
XapI	RAATTY	1 cut(s)	812
XhoI	CTCGAG	1 cut(s)	606
XmiI	GTMKAC	1 cut(s)	601
XspI	CTAG	4 cut(s)	38, 299, 626, 666
ZrmI	AGTACT	1 cut(s)	670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.