Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010581

Physical Location & Seq

Genomic Coordinates Forward (+)

14114844 .. 14115631

Gene Structure 788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G115900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 606 bp

ATGACAGATTTTACAGACGACGCGTCGTCGTCTTCTTCGAATCGAGTTTCAGCTCAGGCCCACTTGCAGAGTGTAGAGTTCAAGAAGAGGAAGGCAGGGAGGAAGAAGTTCAATGAGACAAGGCACCCAATTTACAAAGGCGTGAGGCAAAGGTGTGGAAAGTGGGTTTGTGAGCTGAGGCAGCCTGATCAGAAGAAGTCCCGGATATGGCTGGGGACCTTCACCTGCCCTGACATGGCGGCTAGGGCTTATGATGTAGCGGCTTTGGCTCTCAAGGGAAAGTCTGCTGCTTTGAACTTTCCTCATGAGGCAAGTACCCTGCCACGCATTGCGTCCACGTGTTCTGTTAAAGACCTACAGTGTGCTGCTGCGGAGGCTGCTGAGGGTTTTTTTGAGGTTGAAGTTAAATCATCAGGTTTGGAGGAGAAGGAAGAAGAAGAAGTGGTGTATTTGGATGAGGAGGAGTTGTTTAACATGCCGGGGTTGATTGACAGCTTGGCTGAGGGTTTGATTCTCACTCCACCAGCCATGCAGAAAGGTTTTAATTGGAATGATTTTGATGATGATATGGAGAATGCTGTTGATTTTTCCTTGTGGAGTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0031323 GO:0031326 GO:0043436 GO:0043565 GO:0044237 GO:0044281 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

202

Amino Acids

22.48

Weight (kDa)

4.97

Isoelectric Point (pI)

41.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010581)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g18090
malus_domestica	MD14G1017200.v1.1
prunus_persica	Prupe.7G115900_v2.0.a1
pyrus_communis	pycom14g01500
rosa_chinensis	RchiOBHm_Chr3g0472361
rosa_laevigata	RLG00000004865 RLG00000014944 RLG00000024085 RLG00000029058
rosa_multiflora	Rmu_sc0000627.1_g000006 Rmu_sc0000798.1_g000019 Rmu_sc0004769.1_g000013
rosa_roxburghii	Rroxscaffold_2G00100500 Rroxscaffold_3G00231020 Rroxscaffold_6G00408990
rosa_rugosa	Rorug03G0124300
rosa_samantha	Rh2DG097700 Rh3BG202500 Rh3DG172700 Rh7CG172300
rosa_wichuraiana	Rw3G016480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	233
Acc36I	ACCTGC	1 cut(s)	233
AccB1I	GGYRCC	1 cut(s)	123
AccII	CGCG	1 cut(s)	23
AciI	CCGC	3 cut(s)	239, 260, 371
AcvI	CACGTG	1 cut(s)	339
AfaI	GTAC	1 cut(s)	316
AfiI	CCNNNNNNNGG	2 cut(s)	207, 235
AflIII	ACRYGT	2 cut(s)	21, 338
AgsI	TTSAA	4 cut(s)	82, 112, 295, 401
AhdI	GACNNNNNGTC	2 cut(s)	22, 25
AluBI	AGCT	3 cut(s)	53, 175, 495
AluI	AGCT	3 cut(s)	53, 175, 495
Alw26I	GTCTC	1 cut(s)	110
AoxI	GGCC	1 cut(s)	57
ApeKI	GCWGC	5 cut(s)	181, 287, 365, 368, 377
Asp700I	GAANNNNTTC	1 cut(s)	107
AspS9I	GGNCC	2 cut(s)	58, 216
AsuC2I	CCSGG	2 cut(s)	202, 480
AsuHPI	GGTGA	1 cut(s)	214
AsuII	TTCGAA	1 cut(s)	38
AvaII	GGWCC	1 cut(s)	216
BanI	GGYRCC	1 cut(s)	123
BbrPI	CACGTG	1 cut(s)	339
BbsI	GAAGAC	1 cut(s)	24
BbvCI	CCTCAGC	3 cut(s)	176, 381, 501
BbvI	GCAGC	5 cut(s)	193, 274, 352, 355, 364
BclI	TGATCA	1 cut(s)	187
BcnI	CCSGG	2 cut(s)	202, 480
BcoDI	GTCTC	1 cut(s)	110
BfaI	CTAG	1 cut(s)	243
BfmI	CTRYAG	1 cut(s)	356
BfuAI	ACCTGC	1 cut(s)	233
BisI	GCNGC	7 cut(s)	182, 240, 261, 288, 366, 369, 378
BlsI	GCNGC	7 cut(s)	183, 241, 262, 289, 367, 370, 379
Bme1390I	CCNGG	2 cut(s)	202, 480
Bme18I	GGWCC	1 cut(s)	216
BmeRI	GACNNNNNGTC	2 cut(s)	22, 25
BmgT120I	GGNCC	2 cut(s)	58, 216
BmiI	GGNNCC	2 cut(s)	125, 217
BmrFI	CCNGG	2 cut(s)	202, 480
BpiI	GAAGAC	1 cut(s)	24
Bpu10I	CCTNAGC	4 cut(s)	54, 176, 381, 501
Bpu14I	TTCGAA	1 cut(s)	38
BpuEI	CTTGAG	1 cut(s)	257
BpuMI	CCSGG	2 cut(s)	202, 480
BsaAI	YACGTR	1 cut(s)	339
BsaJI	CCNNGG	1 cut(s)	479
BsaXI	ACNNNNNCTCC	2 cut(s)	452, 482
Bsc4I	CCNNNNNNNGG	2 cut(s)	207, 235
Bse3DI	GCAATG	1 cut(s)	327
BseDI	CCNNGG	1 cut(s)	479
BseGI	GGATG	1 cut(s)	460
BseLI	CCNNNNNNNGG	2 cut(s)	207, 235
BseMI	GCAATG	1 cut(s)	327
BseMII	CTCAG	4 cut(s)	68, 167, 372, 492
BseRI	GAGGAG	3 cut(s)	437, 473, 476
BseXI	GCAGC	5 cut(s)	193, 274, 352, 355, 364
BseYI	CCCAGC	1 cut(s)	211
Bsh1236I	CGCG	1 cut(s)	23
BshFI	GGCC	1 cut(s)	59
BshNI	GGYRCC	1 cut(s)	123
BsiSI	CCGG	2 cut(s)	202, 479
BslFI	GGGAC	2 cut(s)	184, 229
BslI	CCNNNNNNNGG	2 cut(s)	207, 235
BsmAI	GTCTC	1 cut(s)	110
BsmFI	GGGAC	2 cut(s)	184, 229
BsmI	GAATGC	1 cut(s)	580
BsnI	GGCC	1 cut(s)	59
Bsp119I	TTCGAA	1 cut(s)	38
Bsp143I	GATC	1 cut(s)	187
BspACI	CCGC	3 cut(s)	239, 260, 371
BspANI	GGCC	1 cut(s)	59
BspCNI	CTCAG	4 cut(s)	67, 168, 373, 493
BspFNI	CGCG	1 cut(s)	23
BspHI	TCATGA	1 cut(s)	304
BspLI	GGNNCC	2 cut(s)	125, 217
BspMI	ACCTGC	1 cut(s)	233
BspT104I	TTCGAA	1 cut(s)	38
BspT107I	GGYRCC	1 cut(s)	123
BsrDI	GCAATG	1 cut(s)	327
BssECI	CCNNGG	1 cut(s)	479
BssMI	GATC	1 cut(s)	187
Bst4CI	ACNGT	1 cut(s)	360
Bst6I	CTCTTC	1 cut(s)	80
BstBAI	YACGTR	1 cut(s)	339
BstBI	TTCGAA	1 cut(s)	38
BstDEI	CTNAG	4 cut(s)	54, 176, 381, 501
BstF5I	GGATG	1 cut(s)	460
BstFNI	CGCG	1 cut(s)	23
BstKTI	GATC	1 cut(s)	190
BstMAI	GTCTC	1 cut(s)	110
BstMBI	GATC	1 cut(s)	187
BstMWI	GCNNNNNNNGC	5 cut(s)	181, 245, 266, 374, 377
BstNSI	RCATGY	1 cut(s)	478
BstSCI	CCNGG	2 cut(s)	200, 478
BstSFI	CTRYAG	1 cut(s)	356
BstUI	CGCG	1 cut(s)	23
BstV1I	GCAGC	5 cut(s)	193, 274, 352, 355, 364
BstV2I	GAAGAC	1 cut(s)	24
BsuRI	GGCC	1 cut(s)	59
BtsCI	GGATG	1 cut(s)	460
BtsIMutI	CAGTG	1 cut(s)	365
BveI	ACCTGC	1 cut(s)	233
CciI	TCATGA	1 cut(s)	304
Cfr13I	GGNCC	2 cut(s)	58, 216
CseI	GACGC	3 cut(s)	12, 29, 321
Csp6I	GTAC	1 cut(s)	315
CviAII	CATG	4 cut(s)	235, 305, 475, 529
CviQI	GTAC	1 cut(s)	315
DdeI	CTNAG	4 cut(s)	54, 176, 381, 501
DpnI	GATC	1 cut(s)	189
DpnII	GATC	1 cut(s)	187
DriI	GACNNNNNGTC	2 cut(s)	22, 25
Eam1104I	CTCTTC	1 cut(s)	80
Eam1105I	GACNNNNNGTC	2 cut(s)	22, 25
EarI	CTCTTC	1 cut(s)	80
Eco47I	GGWCC	1 cut(s)	216
Eco72I	CACGTG	1 cut(s)	339
EcoO109I	RGGNCCY	1 cut(s)	216
FaeI	CATG	4 cut(s)	238, 308, 478, 532
FaiI	YATR	7 cut(s)	208, 236, 252, 306, 476, 530, 569
FaqI	GGGAC	2 cut(s)	184, 229
FatI	CATG	4 cut(s)	234, 304, 474, 528
FbaI	TGATCA	1 cut(s)	187
Fnu4HI	GCNGC	7 cut(s)	182, 240, 261, 288, 366, 369, 378
FokI	GGATG	1 cut(s)	467
Fsp4HI	GCNGC	7 cut(s)	182, 240, 261, 288, 366, 369, 378
FspBI	CTAG	1 cut(s)	243
GluI	GCNGC	7 cut(s)	182, 240, 261, 288, 366, 369, 378
GsaI	CCCAGC	1 cut(s)	215
HaeIII	GGCC	1 cut(s)	59
HapII	CCGG	2 cut(s)	202, 479
HgaI	GACGC	3 cut(s)	12, 29, 321
Hin1II	CATG	4 cut(s)	238, 308, 478, 532
HinfI	GANTC	2 cut(s)	40, 511
HpaII	CCGG	2 cut(s)	202, 479
HphI	GGTGA	1 cut(s)	214
Hpy166II	GTNNAC	1 cut(s)	336
Hpy188I	TCNGA	1 cut(s)	192
Hpy188III	TCNNGA	2 cut(s)	82, 305
Hpy8I	GTNNAC	1 cut(s)	336
Hpy99I	CGWCG	3 cut(s)	23, 28, 31
HpyAV	CCTTC	3 cut(s)	85, 229, 421
HpyCH4III	ACNGT	1 cut(s)	360
HpyCH4IV	ACGT	1 cut(s)	338
HpyCH4V	TGCA	2 cut(s)	67, 532
HpyF10VI	GCNNNNNNNGC	5 cut(s)	181, 245, 266, 374, 377
HpyF3I	CTNAG	4 cut(s)	54, 176, 381, 501
HpySE526I	ACGT	1 cut(s)	338
Hsp92II	CATG	4 cut(s)	238, 308, 478, 532
Ksp22I	TGATCA	1 cut(s)	187
Kzo9I	GATC	1 cut(s)	187
Lsp1109I	GCAGC	5 cut(s)	193, 274, 352, 355, 364
MaeI	CTAG	1 cut(s)	243
MaeII	ACGT	1 cut(s)	338
MalI	GATC	1 cut(s)	189
MboI	GATC	1 cut(s)	187
MboII	GAAGA	8 cut(s)	24, 27, 97, 115, 205, 443, 446, 449
MluCI	AATT	2 cut(s)	129, 544
MluI	ACGCGT	1 cut(s)	21
MroXI	GAANNNNTTC	1 cut(s)	107
MseI	TTAA	4 cut(s)	348, 405, 471, 543
MspI	CCGG	2 cut(s)	202, 479
MspR9I	CCNGG	2 cut(s)	202, 480
Mva1269I	GAATGC	1 cut(s)	580
MvnI	CGCG	1 cut(s)	23
MwoI	GCNNNNNNNGC	5 cut(s)	181, 245, 266, 374, 377
NciI	CCSGG	2 cut(s)	202, 480
NdeII	GATC	1 cut(s)	187
NlaIII	CATG	4 cut(s)	238, 308, 478, 532
NlaIV	GGNNCC	2 cut(s)	125, 217
NspI	RCATGY	1 cut(s)	478
NspV	TTCGAA	1 cut(s)	38
PagI	TCATGA	1 cut(s)	304
PaqCI	CACCTGC	1 cut(s)	233
PcsI	WCGNNNNNNNCGW	1 cut(s)	35
PctI	GAATGC	1 cut(s)	580
PdmI	GAANNNNTTC	1 cut(s)	107
PfeI	GAWTC	2 cut(s)	40, 511
PfoI	TCCNGGA	1 cut(s)	200
PkrI	GCNGC	7 cut(s)	183, 241, 262, 289, 367, 370, 379
PmaCI	CACGTG	1 cut(s)	339
PmlI	CACGTG	1 cut(s)	339
Ppu21I	YACGTR	1 cut(s)	339
PpuMI	RGGWCCY	1 cut(s)	216
Psp5II	RGGWCCY	1 cut(s)	216
PspCI	CACGTG	1 cut(s)	339
PspFI	CCCAGC	1 cut(s)	211
PspN4I	GGNNCC	2 cut(s)	125, 217
PspPI	GGNCC	2 cut(s)	58, 216
PspPPI	RGGWCCY	1 cut(s)	216
RsaI	GTAC	1 cut(s)	316
RsaNI	GTAC	1 cut(s)	315
SaqAI	TTAA	4 cut(s)	348, 405, 471, 543
SatI	GCNGC	7 cut(s)	182, 240, 261, 288, 366, 369, 378
Sau3AI	GATC	1 cut(s)	187
Sau96I	GGNCC	2 cut(s)	58, 216
ScrFI	CCNGG	2 cut(s)	202, 480
SfcI	CTRYAG	1 cut(s)	356
SfuI	TTCGAA	1 cut(s)	38
SinI	GGWCC	1 cut(s)	216
SmlI	CTYRAG	1 cut(s)	272
SmoI	CTYRAG	1 cut(s)	272
Sse9I	AATT	2 cut(s)	129, 544
SsiI	CCGC	3 cut(s)	239, 260, 371
SspMI	CTAG	1 cut(s)	243
StyD4I	CCNGG	2 cut(s)	200, 478
TaaI	ACNGT	1 cut(s)	360
TaiI	ACGT	1 cut(s)	341
TaqI	TCGA	2 cut(s)	38, 43
TasI	AATT	2 cut(s)	129, 544
TauI	GCSGC	2 cut(s)	242, 263
TfiI	GAWTC	2 cut(s)	40, 511
Tru1I	TTAA	4 cut(s)	348, 405, 471, 543
Tru9I	TTAA	4 cut(s)	348, 405, 471, 543
TscAI	CASTG	1 cut(s)	365
TseI	GCWGC	5 cut(s)	181, 287, 365, 368, 377
TspRI	CASTG	1 cut(s)	365
VpaK11BI	GGWCC	1 cut(s)	216
XceI	RCATGY	1 cut(s)	478
XmnI	GAANNNNTTC	1 cut(s)	107
XspI	CTAG	1 cut(s)	243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.